>gb|AY658595.1| Synthetic construct Peudomonas aeruginosa clone FLH034108.01F
           PA5524 gene, partial cds
          Length = 783

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 82  tttcgatcacgcagttgccgccat 105
           ||||||||| ||||||||||||||
Sbjct: 769 tttcgatcaggcagttgccgccat 746

>gb|AE004965.1| Pseudomonas aeruginosa PAO1, section 526 of 529 of the complete
           genome
          Length = 10353

 Score = 40.1 bits (20), Expect = 1.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 82  tttcgatcacgcagttgccgccat 105
           ||||||||| ||||||||||||||
Sbjct: 878 tttcgatcaggcagttgccgccat 855

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 85      cgatcacgcagttgccgcc 103
               |||||||||||||||||||
Sbjct: 1725196 cgatcacgcagttgccgcc 1725178



 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 84     tcgatcacgcagttgccgc 102
              |||||||||||||||||||
Sbjct: 349239 tcgatcacgcagttgccgc 349221

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 22       aacacacacgtttctggcc 40
                |||||||||||||||||||
Sbjct: 26669011 aacacacacgtttctggcc 26669029

>emb|AL034420.16|HS1112F19 Human DNA sequence from clone RP5-1112F19 on chromosome
           20q13.13-13.2 Contains the SALL4 gene for sal-like 4
           (Drosophila)and a putative CpG island, complete sequence
          Length = 116368

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 63  tgggcaaagtaaagtgaaa 81
           |||||||||||||||||||
Sbjct: 913 tgggcaaagtaaagtgaaa 895

>emb|AL390965.15| Human DNA sequence from clone RP11-640E11 on chromosome 13 Contains a
             solute carrier family 25 (mitochondrial carrier; adenine
             nucleotide translocator), member 5 (SLC25A5) pseudogene,
             complete sequence
          Length = 92179

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    caaagtaaagtgaaatttc 85
             |||||||||||||||||||
Sbjct: 56672 caaagtaaagtgaaatttc 56690

>emb|AL359736.19| Human DNA sequence from clone RP11-307N16 on chromosome 13 Contains the
             gene for a novel protein (FLJ31208), three novel genes, a
             novel pseudogene and three CpG islands, complete sequence
          Length = 178850

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 35615 tgggcaaagtaaagtgaaa 35633

>gb|AC127789.4| Rattus norvegicus 1 BAC CH230-15M17 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 240825

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 37     ggccgggcgggcgacggga 55
              |||||||||||||||||||
Sbjct: 210713 ggccgggcgggcgacggga 210731

>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16
          Length = 343473

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 35    ctggccgggcgggcgacgg 53
             |||||||||||||||||||
Sbjct: 74929 ctggccgggcgggcgacgg 74911

>emb|BX640435.1| Bordetella parapertussis strain 12822, complete genome; segment 13/14
          Length = 346259

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 35     ctggccgggcgggcgacgg 53
              |||||||||||||||||||
Sbjct: 339659 ctggccgggcgggcgacgg 339641

>gb|AC107058.4| Homo sapiens BAC clone RP11-633G11 from 4, complete sequence
          Length = 126135

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 40031 tgggcaaagtaaagtgaaa 40049

>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 223542

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 53    ggaaaaagcatgggcaaag 71
             |||||||||||||||||||
Sbjct: 31437 ggaaaaagcatgggcaaag 31419

>dbj|AB034620.1| Equus caballus microsatellite TKY311 DNA
          Length = 447

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 23  acacacacgtttctggccg 41
           |||||||||||||||||||
Sbjct: 187 acacacacgtttctggccg 205

>gb|AC068442.7| Homo sapiens chromosome 17, clone RP11-187D20, complete sequence
          Length = 59731

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 41465 tgggcaaagtaaagtgaaa 41447

>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 173977

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 53     ggaaaaagcatgggcaaag 71
              |||||||||||||||||||
Sbjct: 104692 ggaaaaagcatgggcaaag 104674

>gb|AC084406.7|AC084406 Oryza sativa chromosome 3 BAC OSJNBa0067E01 genomic sequence, complete
             sequence
          Length = 140044

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 22    aacacacacgtttctggcc 40
             |||||||||||||||||||
Sbjct: 88829 aacacacacgtttctggcc 88811

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 22       aacacacacgtttctggcc 40
                |||||||||||||||||||
Sbjct: 26760334 aacacacacgtttctggcc 26760352

>gb|AC087738.13| Homo sapiens chromosome 15, clone RP11-365F16, complete sequence
          Length = 181511

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 74858 tgggcaaagtaaagtgaaa 74840

>gb|AC093330.25| Homo sapiens chromosome 18, clone RP11-862L9, complete sequence
          Length = 198182

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 67627 tgggcaaagtaaagtgaaa 67609

>gb|AC158671.3| Mus musculus 6 BAC RP23-62E15 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 218969

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 67    caaagtaaagtgaaatttc 85
             |||||||||||||||||||
Sbjct: 75213 caaagtaaagtgaaatttc 75231

>dbj|AK099933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119E02, full
           insert sequence
          Length = 4743

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 22  aacacacacgtttctggcc 40
           |||||||||||||||||||
Sbjct: 641 aacacacacgtttctggcc 659

>dbj|AK060719.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E11,
          full insert sequence
          Length = 1249

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                             
Query: 22 aacacacacgtttctggcc 40
          |||||||||||||||||||
Sbjct: 8  aacacacacgtttctggcc 26

>emb|AL158802.1|CNS01RGO Human chromosome 14 DNA sequence BAC C-2008K18 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 194523

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 28466 tgggcaaagtaaagtgaaa 28448

>dbj|AB103855.1| Equus caballus DNA, microsatellite TKY637
          Length = 445

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 23  acacacacgtttctggccg 41
           |||||||||||||||||||
Sbjct: 261 acacacacgtttctggccg 243

>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence
          Length = 184886

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 63    tgggcaaagtaaagtgaaa 81
             |||||||||||||||||||
Sbjct: 14871 tgggcaaagtaaagtgaaa 14853

>gb|AC153885.2| Mus musculus 6 BAC RP23-477L5 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 190785

 Score = 38.2 bits (19), Expect = 5.6
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 67     caaagtaaagtgaaatttc 85
              |||||||||||||||||||
Sbjct: 157823 caaagtaaagtgaaatttc 157841


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 711,889
Number of Sequences: 3902068
Number of extensions: 711889
Number of successful extensions: 59008
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58926
Number of HSP's gapped (non-prelim): 82
length of query: 121
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 100
effective length of database: 17,151,101,840
effective search space: 1715110184000
effective search space used: 1715110184000
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)