| Clone Name | rbags22k17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_197779.1| Oryza sativa (japonica cultivar-group) putative calcineurin (OSJNBa0027P10.7), mRNA Length = 653 Score = 341 bits (172), Expect = 2e-90 Identities = 323/372 (86%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 306 ttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtatggaagagtcattatc 365 ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 458 ttgaatacaaaactgggaaatgtggttgttatgtccttgaggtacggaagagtcattatc 399 Query: 366 ttcatcaaggagggatttcgtgagacaaagttctcccactctgctctatctatttttcca 425 |||| || |||||||| | ||||||||| ||||||||||||| |||||||||| | ||| Sbjct: 398 ttcaataaagagggattccttgagacaaaattctcccactctgttctatctattctccca 339 Query: 426 tcttgattcacatcagcatctgaaaatgtcttgtcaaggattgactcgatggtttcatct 485 || ||||| ||||||||||||||| |||||||||||||||| ||| || | ||||| Sbjct: 338 tcctgattagtatcagcatctgaaaacgtcttgtcaaggattgtctcaataatctcatca 279 Query: 486 gataacctcattcctgattcactcagaagagcgataagcatctgcttgacctcttttcgt 545 ||||| |||||| ||||||||| |||||||| || | |||||| || ||||| |||||| Sbjct: 278 gataatctcatttctgattcacctagaagagcaatcaacatctgttttacctcctttcgt 219 Query: 546 tcaataaagccccgtgttgtccatatcatatagcttaaaggaaaaatcaattttctcttc 605 |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 218 tcaataaa-cccagtgttgtccatatcatatagcttgaaggaaaaatcaattttctcttc 160 Query: 606 cattggaatgctagggtgaaatacatttagggcttgaacaaagtcagcaaagtcaatggc 665 |||||| ||| | || ||||||||||||| ||| ||||||||||| ||||||| ||| | Sbjct: 159 cattgggatgtttggatgaaatacatttaaagctcgaacaaagtcaccaaagtcgatgac 100 Query: 666 cccccttttctt 677 |||||||||||| Sbjct: 99 cccccttttctt 88
>gb|DQ201195.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 1 (CBL1) mRNA, complete cds Length = 642 Score = 341 bits (172), Expect = 2e-90 Identities = 323/372 (86%), Gaps = 1/372 (0%) Strand = Plus / Minus Query: 306 ttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtatggaagagtcattatc 365 ||||| ||||| ||||| |||||||| ||||||||||| ||||| ||||||||||||||| Sbjct: 614 ttgaatacaaaactgggaaatgtggttgttatgtccttgaggtacggaagagtcattatc 555 Query: 366 ttcatcaaggagggatttcgtgagacaaagttctcccactctgctctatctatttttcca 425 |||| || |||||||| | ||||||||| ||||||||||||| |||||||||| | ||| Sbjct: 554 ttcaataaagagggattccttgagacaaaattctcccactctgttctatctattctccca 495 Query: 426 tcttgattcacatcagcatctgaaaatgtcttgtcaaggattgactcgatggtttcatct 485 || ||||| ||||||||||||||| |||||||||||||||| ||| || | ||||| Sbjct: 494 tcctgattagtatcagcatctgaaaacgtcttgtcaaggattgtctcaataatctcatca 435 Query: 486 gataacctcattcctgattcactcagaagagcgataagcatctgcttgacctcttttcgt 545 ||||| |||||| ||||||||| |||||||| || | |||||| || ||||| |||||| Sbjct: 434 gataatctcatttctgattcacctagaagagcaatcaacatctgttttacctcctttcgt 375 Query: 546 tcaataaagccccgtgttgtccatatcatatagcttaaaggaaaaatcaattttctcttc 605 |||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 374 tcaataaa-cccagtgttgtccatatcatatagcttgaaggaaaaatcaattttctcttc 316 Query: 606 cattggaatgctagggtgaaatacatttagggcttgaacaaagtcagcaaagtcaatggc 665 |||||| ||| | || ||||||||||||| ||| ||||||||||| ||||||| ||| | Sbjct: 315 cattgggatgtttggatgaaatacatttaaagctcgaacaaagtcaccaaagtcgatgac 256 Query: 666 cccccttttctt 677 |||||||||||| Sbjct: 255 cccccttttctt 244
>gb|AY104107.1| Zea mays PCO062189 mRNA sequence Length = 1394 Score = 276 bits (139), Expect = 9e-71 Identities = 326/387 (84%), Gaps = 1/387 (0%) Strand = Plus / Minus Query: 291 tcgtcgaccttcgagttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtat 350 |||||||| | |||||| | |||||||| |||||||| || ||||||||||| |||||| Sbjct: 1039 tcgtcgacttccgagttacacacaaagctagggaatgttgttgttatgtccttgaggtat 980 Query: 351 ggaagagtcattatcttcatcaaggagggatttcgtgagacaaagttctcccactctgct 410 || ||||||||||||||||||||||| ||||||| || |||||| ||||||||||||| | Sbjct: 979 ggcagagtcattatcttcatcaaggaaggatttcttgtgacaaaattctcccactctgtt 920 Query: 411 ctatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgac 470 ||||||||||||||||| ||||| |||||||||||||||||||||| || ||||||| | Sbjct: 919 ctatctatttttccatcctgatttgcatcagcatctgaaaatgtcttatccaggattgtc 860 Query: 471 tcgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgc 530 || ||| | ||||| |||| ||||||| ||||||| | || ||||| || | ||||||| Sbjct: 859 tcaatgatctcatcagatagcctcatttctgattctcctaggagagcaattaacatctgc 800 Query: 531 ttgacctcttttcgttcaataaagccccgtgttgtccatatcatatagcttaaaggaaaa 590 || ||||| |||||||||||||| ||| ||| |||||||| |||||||| || || || Sbjct: 799 ttaacctcctttcgttcaataaa-ccctgtgccatccatatcgtatagcttgaacgagaa 741 Query: 591 atcaattttctcttccattggaatgctagggtgaaatacatttagggcttgaacaaagtc 650 ||| | ||| ||||||||||| || | || ||||| |||||||| ||| | |||||||| Sbjct: 740 atcgactttttcttccattgggatatttggatgaaacacatttagagctcggacaaagtc 681 Query: 651 agcaaagtcaatggccccccttttctt 677 | |||| |||||| | ||||||||||| Sbjct: 680 accaaaatcaatgacaccccttttctt 654
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 345 aggtatggaagagtcattatcttcatcaaggagggatttcgtgagacaaagttctcccac 404 ||||| ||||||||||||||||||| || |||||||| | ||||||||| ||||||||| Sbjct: 102495 aggtacggaagagtcattatcttcaataaagagggattccttgagacaaaattctcccac 102436 Query: 405 tctgctctatctatttttccatcttgattcacatcagcatctgaaaatgtct 456 |||| |||||||||| | ||||| ||||| ||||||||||||||| |||| Sbjct: 102435 tctgttctatctattctcccatcctgattagtatcagcatctgaaaacgtct 102384 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 590 aatcaattttctcttccattggaatgctagggtgaaatacatttagggcttgaacaaagt 649 |||||||||||||||||||||| ||| | || ||||||||||||| ||| ||||||||| Sbjct: 101852 aatcaattttctcttccattgggatgtttggatgaaatacatttaaagctcgaacaaagt 101793 Query: 650 cagcaaagtcaatggccccccttttctt 677 || ||||||| ||| ||||||||||||| Sbjct: 101792 caccaaagtcgatgaccccccttttctt 101765 Score = 71.9 bits (36), Expect = 3e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 534 acctcttttcgttcaataaagccccgtgttgtccatatcatatagcttaaaggaaa 589 ||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 101987 acctcctttcgttcaataaa-cccagtgttgtccatatcatatagcttgaaggaaa 101933 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 455 cttgtcaaggattgactcgatggtttcatctgataacctcattcctgattcactcagaag 514 |||||||||||||| ||| || | ||||| ||||| |||||| ||||||||| ||||| Sbjct: 102286 cttgtcaaggattgtctcaataatctcatcagataatctcatttctgattcacctagaag 102227 Query: 515 agc 517 ||| Sbjct: 102226 agc 102224
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 345 aggtatggaagagtcattatcttcatcaaggagggatttcgtgagacaaagttctcccac 404 ||||| ||||||||||||||||||| || |||||||| | ||||||||| ||||||||| Sbjct: 21787812 aggtacggaagagtcattatcttcaataaagagggattccttgagacaaaattctcccac 21787753 Query: 405 tctgctctatctatttttccatcttgattcacatcagcatctgaaaatgtct 456 |||| |||||||||| | ||||| ||||| ||||||||||||||| |||| Sbjct: 21787752 tctgttctatctattctcccatcctgattagtatcagcatctgaaaacgtct 21787701 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 590 aatcaattttctcttccattggaatgctagggtgaaatacatttagggcttgaacaaagt 649 |||||||||||||||||||||| ||| | || ||||||||||||| ||| ||||||||| Sbjct: 21787169 aatcaattttctcttccattgggatgtttggatgaaatacatttaaagctcgaacaaagt 21787110 Query: 650 cagcaaagtcaatggccccccttttctt 677 || ||||||| ||| ||||||||||||| Sbjct: 21787109 caccaaagtcgatgaccccccttttctt 21787082 Score = 71.9 bits (36), Expect = 3e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 534 acctcttttcgttcaataaagccccgtgttgtccatatcatatagcttaaaggaaa 589 ||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 21787304 acctcctttcgttcaataaa-cccagtgttgtccatatcatatagcttgaaggaaa 21787250 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 455 cttgtcaaggattgactcgatggtttcatctgataacctcattcctgattcactcagaag 514 |||||||||||||| ||| || | ||||| ||||| |||||| ||||||||| ||||| Sbjct: 21787603 cttgtcaaggattgtctcaataatctcatcagataatctcatttctgattcacctagaag 21787544 Query: 515 agc 517 ||| Sbjct: 21787543 agc 21787541
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 103 bits (52), Expect = 7e-19 Identities = 97/112 (86%) Strand = Plus / Minus Query: 345 aggtatggaagagtcattatcttcatcaaggagggatttcgtgagacaaagttctcccac 404 ||||| ||||||||||||||||||| || |||||||| | ||||||||| ||||||||| Sbjct: 21799475 aggtacggaagagtcattatcttcaataaagagggattccttgagacaaaattctcccac 21799416 Query: 405 tctgctctatctatttttccatcttgattcacatcagcatctgaaaatgtct 456 |||| |||||||||| | ||||| ||||| ||||||||||||||| |||| Sbjct: 21799415 tctgttctatctattctcccatcctgattagtatcagcatctgaaaacgtct 21799364 Score = 95.6 bits (48), Expect = 2e-16 Identities = 78/88 (88%) Strand = Plus / Minus Query: 590 aatcaattttctcttccattggaatgctagggtgaaatacatttagggcttgaacaaagt 649 |||||||||||||||||||||| ||| | || ||||||||||||| ||| ||||||||| Sbjct: 21798832 aatcaattttctcttccattgggatgtttggatgaaatacatttaaagctcgaacaaagt 21798773 Query: 650 cagcaaagtcaatggccccccttttctt 677 || ||||||| ||| ||||||||||||| Sbjct: 21798772 caccaaagtcgatgaccccccttttctt 21798745 Score = 71.9 bits (36), Expect = 3e-09 Identities = 52/56 (92%), Gaps = 1/56 (1%) Strand = Plus / Minus Query: 534 acctcttttcgttcaataaagccccgtgttgtccatatcatatagcttaaaggaaa 589 ||||| |||||||||||||| ||| ||||||||||||||||||||||| ||||||| Sbjct: 21798967 acctcctttcgttcaataaa-cccagtgttgtccatatcatatagcttgaaggaaa 21798913 Score = 46.1 bits (23), Expect = 0.15 Identities = 53/63 (84%) Strand = Plus / Minus Query: 455 cttgtcaaggattgactcgatggtttcatctgataacctcattcctgattcactcagaag 514 |||||||||||||| ||| || | ||||| ||||| |||||| ||||||||| ||||| Sbjct: 21799266 cttgtcaaggattgtctcaataatctcatcagataatctcatttctgattcacctagaag 21799207 Query: 515 agc 517 ||| Sbjct: 21799206 agc 21799204
>ref|NM_202837.1| Arabidopsis thaliana CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding AT4G17615 (CBL1) transcript variant AT4G17615.2 mRNA, complete cds Length = 1426 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 975 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 916 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 915 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 856 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 855 tgacctcttgtcgttcaat 837
>ref|NM_117870.2| Arabidopsis thaliana CBL1 (CALCINEURIN B-LIKE PROTEIN 1); calcium ion binding AT4G17615 (CBL1) transcript variant AT4G17615.1 mRNA, complete cds Length = 1220 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 769 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 710 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 709 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 650 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 649 tgacctcttgtcgttcaat 631
>emb|BX829224.1|CNS0A2JH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 988 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 666 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 607 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 606 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 547 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 546 tgacctcttgtcgttcaat 528
>emb|BX827009.1|CNS0A2D2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB86ZC09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1316 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 975 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 916 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 915 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 856 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 855 tgacctcttgtcgttcaat 837
>gb|BT005567.1| Arabidopsis thaliana clone U51091 putative calcineurin B-like protein 1 (At4g17615) mRNA, complete cds Length = 673 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 508 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 449 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 448 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 389 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 388 tgacctcttgtcgttcaat 370
>dbj|AK118798.1| Arabidopsis thaliana At4g17615 mRNA for calcineurin B-like protein 1, putative, complete cds, clone: RAFL21-13-D20 Length = 1220 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 769 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 710 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 709 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 650 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 649 tgacctcttgtcgttcaat 631
>gb|AF076251.1|AF076251 Arabidopsis thaliana calcineurin B-like protein 1 (CBL1) mRNA, complete cds Length = 986 Score = 61.9 bits (31), Expect = 3e-06 Identities = 112/139 (80%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| |||||||||||||||||||| || |||||| ||||||||| || || ||| || Sbjct: 694 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtcttatcgagtattatct 635 Query: 472 cgatggtttcatctgataacctcattcctgattcactcagaagagcgataagcatctgct 531 | ||||||||||| | | ||||| | ||||| | ||||| ||||| | ||| |||| Sbjct: 634 ctatggtttcatcagccagtttcatttcagattcgcagagaagcgcgatcaacatttgct 575 Query: 532 tgacctcttttcgttcaat 550 ||||||||| ||||||||| Sbjct: 574 tgacctcttgtcgttcaat 556
>ref|XM_465036.1| Oryza sativa (japonica cultivar-group), mRNA Length = 690 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 333 gttatgtcctttaggtatggaagagtcat 361 ||||||||||||||||||||||||||||| Sbjct: 635 gttatgtcctttaggtatggaagagtcat 607
>gb|DQ201202.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 8 (CBL8) mRNA, complete cds Length = 642 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 333 gttatgtcctttaggtatggaagagtcat 361 ||||||||||||||||||||||||||||| Sbjct: 587 gttatgtcctttaggtatggaagagtcat 559
>gb|AY818172.1| Ornithogalum virens clone 5OvR1 putative calcineurin B-like protein mRNA, partial cds Length = 742 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/81 (85%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 519 ataagcatctgcttgacctcttttcgttcaataaagccccgtgttgtccatatcatatag 578 ||||||||||| |||||| |||| |||||||||||| |||||| |||| |||||| || Sbjct: 606 ataagcatctgtttgaccgctttccgttcaataaag-cccgtgccatccaaatcataaag 548 Query: 579 cttaaaggaaaaatcaatttt 599 ||| || || ||||||||||| Sbjct: 547 cttgaaagagaaatcaatttt 527
>emb|Z97343.1|ATFCA8 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 8 Length = 207674 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtct 456 |||| |||||||||||||||||||| || |||||| |||||||| Sbjct: 183544 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtct 183500
>emb|AL161546.2|ATCHRIV46 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 46 Length = 198788 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtct 456 |||| |||||||||||||||||||| || |||||| |||||||| Sbjct: 172909 tatcaatttttccatcttgattcacgtctgcatcttcaaatgtct 172865
>emb|BX828667.1|CNS0A4D9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL27ZF01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 609 Score = 50.1 bits (25), Expect = 0.010 Identities = 61/73 (83%) Strand = Plus / Minus Query: 412 tatctatttttccatcttgattcacatcagcatctgaaaatgtcttgtcaaggattgact 471 |||| ||||||||||||| |||||| || |||||| ||||||||| || || ||| || Sbjct: 288 tatcaatttttccatctttattcacgtctgcatcttcaaatgtcttatcgagtattatct 229 Query: 472 cgatggtttcatc 484 | ||||||||||| Sbjct: 228 ctatggtttcatc 216
>ref|XM_465030.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 303 gagttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtatggaagagtcat 361 ||||||| |||||| |||||||||| | ||||||||||| |||||||| || ||||| Sbjct: 683 gagttgagaacaaaactggggaatgccattgttatgtccttcaggtatgggagggtcat 625
>gb|DQ201201.1| Oryza sativa (japonica cultivar-group) calcineurin B-like protein 7 (CBL7) mRNA, complete cds Length = 642 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Minus Query: 303 gagttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtatggaagagtcat 361 ||||||| |||||| |||||||||| | ||||||||||| |||||||| || ||||| Sbjct: 617 gagttgagaacaaaactggggaatgccattgttatgtccttcaggtatgggagggtcat 559
>gb|AY111046.1| Zea mays CL31773_1 mRNA sequence Length = 549 Score = 46.1 bits (23), Expect = 0.15 Identities = 50/59 (84%) Strand = Plus / Plus Query: 303 gagttgaaaacaaagctggggaatgtggtcgttatgtcctttaggtatggaagagtcat 361 ||||||| ||||||||||||||| | | ||||||||||| |||||||| || ||||| Sbjct: 318 gagttgagaacaaagctggggaacgccatggttatgtccttgaggtatgggagcgtcat 376
>gb|AC123984.14| Mus musculus chromosome 8, clone RP23-78H21, complete sequence Length = 256723 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctct 603 |||||||||||||||||||||| Sbjct: 204026 aaaggaaaaatcaattttctct 204047
>gb|AC123037.4| Mus musculus BAC clone RP24-527F14 from chromosome 6, complete sequence Length = 137122 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctct 603 |||||||||||||||||||||| Sbjct: 45275 aaaggaaaaatcaattttctct 45296
>gb|AC132610.3| Mus musculus BAC clone RP23-374N15 from chromosome 6, complete sequence Length = 195587 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctct 603 |||||||||||||||||||||| Sbjct: 184783 aaaggaaaaatcaattttctct 184804
>gb|AY887897.1| Gossypium hirsutum calcineurin B-like protein 2 (CBL2) mRNA, complete cds Length = 1322 Score = 44.1 bits (22), Expect = 0.59 Identities = 37/42 (88%) Strand = Plus / Minus Query: 309 aaaacaaagctggggaatgtggtcgttatgtcctttaggtat 350 ||||||||||| |||||||| || || |||||||| |||||| Sbjct: 1022 aaaacaaagctcgggaatgttgttgtgatgtccttgaggtat 981
>gb|AC092825.5| Homo sapiens 3 BAC RP11-171G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157842 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Minus Query: 642 aacaaagtcagcaaagtcaatg 663 |||||||||||||||||||||| Sbjct: 155578 aacaaagtcagcaaagtcaatg 155557
>gb|AC137514.2| Mus musculus BAC clone RP24-511G20 from chromosome 8, complete sequence Length = 133829 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 34231 aaaggaaaaatcaattttctc 34251
>ref|XM_677481.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN9304.2), mRNA Length = 660 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 370 tcaaggagggatttcgtgagacaaagttc 398 ||||||||| |||| |||||||||||||| Sbjct: 605 tcaaggaggcatttggtgagacaaagttc 633
>gb|AY813204.1| Schistosoma japonicum SJCHGC00930 protein mRNA, complete cds Length = 1130 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 tctgctctatctatttttccatcttgatt 433 |||||||| || ||||||||||||||||| Sbjct: 793 tctgctctgtccatttttccatcttgatt 765
>gb|AC121923.3| Mus musculus BAC clone RP24-198O18 from chromosome 8, complete sequence Length = 172772 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 147641 aaaggaaaaatcaattttctc 147661
>gb|AC105130.8| Homo sapiens chromosome 8, clone RP11-357L10, complete sequence Length = 188410 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 317 gctggggaatgtggtcgttat 337 ||||||||||||||||||||| Sbjct: 77231 gctggggaatgtggtcgttat 77251
>gb|AC164112.2| Mus musculus BAC clone RP23-266E12 from chromosome 16, complete sequence Length = 171693 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 72745 aaaggaaaaatcaattttctc 72765
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 ctttaggtatggaagagtcat 361 ||||||||||||||||||||| Sbjct: 11057460 ctttaggtatggaagagtcat 11057480
>gb|AC012063.7| Homo sapiens BAC clone RP11-116F11 from 2, complete sequence Length = 125055 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 gcatctgaaaatgtcttgtca 461 ||||||||||||||||||||| Sbjct: 44289 gcatctgaaaatgtcttgtca 44309
>emb|AL662923.21| Mouse DNA sequence from clone RP23-25A3 on chromosome X, complete sequence Length = 211977 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 131940 aaaggaaaaatcaattttctc 131920
>dbj|AP004229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1124_E11 Length = 133524 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 341 ctttaggtatggaagagtcat 361 ||||||||||||||||||||| Sbjct: 40154 ctttaggtatggaagagtcat 40174
>gb|AY887896.1| Gossypium hirsutum calcineurin B-like protein 3 (CBL3) mRNA, complete cds Length = 1224 Score = 42.1 bits (21), Expect = 2.3 Identities = 30/33 (90%) Strand = Plus / Minus Query: 302 cgagttgaaaacaaagctggggaatgtggtcgt 334 ||||| |||||||||||| |||||||| ||||| Sbjct: 983 cgagtggaaaacaaagcttgggaatgtcgtcgt 951
>gb|AY814305.1| Schistosoma japonicum clone SJCHGC00929 unknown mRNA Length = 1114 Score = 42.1 bits (21), Expect = 2.3 Identities = 27/29 (93%) Strand = Plus / Minus Query: 405 tctgctctatctatttttccatcttgatt 433 |||||||| || ||||||||||||||||| Sbjct: 791 tctgctctgtccatttttccatcttgatt 763
>emb|AL772324.5| Mouse DNA sequence from clone RP23-440O7 on chromosome 4, complete sequence Length = 135401 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 101252 aaaggaaaaatcaattttctc 101272
>gb|AC165281.2| Mus musculus BAC clone RP24-502H6 from chromosome 13, complete sequence Length = 225816 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 405 tctgctctatctatttttcca 425 ||||||||||||||||||||| Sbjct: 103994 tctgctctatctatttttcca 103974
>emb|AL954178.8| Mouse DNA sequence from clone RP23-21J10 on chromosome X, complete sequence Length = 103135 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttctc 602 ||||||||||||||||||||| Sbjct: 95420 aaaggaaaaatcaattttctc 95440
>emb|AL669980.9| Mouse DNA sequence from clone RP23-218C2 on chromosome 4, complete sequence Length = 157624 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 304 agttgaaaacaaagctgggga 324 ||||||||||||||||||||| Sbjct: 124076 agttgaaaacaaagctgggga 124056
>ref|NM_179154.1| Arabidopsis thaliana CBL10; calcium ion binding AT4G33000 (CBL10) transcript variant AT4G33000.2 mRNA, complete cds Length = 1036 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 754 tcctttaggtaaggaagagtcatattcttcaacaag 719
>ref|NM_119454.2| Arabidopsis thaliana CBL10; calcium ion binding AT4G33000 (CBL10) transcript variant AT4G33000.1 mRNA, complete cds Length = 1001 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 719 tcctttaggtaaggaagagtcatattcttcaacaag 684
>ref|XM_413891.1| PREDICTED: Gallus gallus similar to U2 small nuclear ribonucleoprotein A (U2 snRNP-A) (LOC415523), mRNA Length = 945 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cgttcaataaagccccgtgt 562 |||||||||||||||||||| Sbjct: 916 cgttcaataaagccccgtgt 935
>gb|AF513507.2| Arabidopsis thaliana calcineurin B-like protein (CBL10) mRNA, complete cds Length = 741 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 689 tcctttaggtaaggaagagtcatattcttcaacaag 654
>gb|AC132317.2| Mus musculus BAC clone RP24-241J19 from chromosome 15, complete sequence Length = 171980 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cacatcagcatctgaaaatg 453 |||||||||||||||||||| Sbjct: 95673 cacatcagcatctgaaaatg 95692
>gb|AC133080.3| Mus musculus BAC clone RP24-280M20 from chromosome 12, complete sequence Length = 159903 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 aggaaaaatcaattttctct 603 |||||||||||||||||||| Sbjct: 4908 aggaaaaatcaattttctct 4889
>gb|AE014306.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 3 of 11 of the complete sequence Length = 250029 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttct 601 |||||||||||||||||||| Sbjct: 62352 aaaggaaaaatcaattttct 62371
>emb|AL359761.7| Human DNA sequence from clone RP11-202O6 on chromosome 13q32.3-34, complete sequence Length = 86883 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 aaaggaaaaatcaattttct 601 |||||||||||||||||||| Sbjct: 69240 aaaggaaaaatcaattttct 69259
>emb|AL354992.7| Human DNA sequence from clone RP11-293A1 on chromosome 9, complete sequence Length = 173911 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 573 atatagcttaaaggaaaaat 592 |||||||||||||||||||| Sbjct: 101799 atatagcttaaaggaaaaat 101818
>gb|AY077849.1| Hippoglossus hippoglossus clone d3/4/5/6/7/TM immunoglobulin D heavy chain mRNA, partial cds Length = 1667 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 atcttgattcacatcagcat 444 |||||||||||||||||||| Sbjct: 1319 atcttgattcacatcagcat 1300
>emb|AL022577.1|HS353H6 Human DNA sequence from clone RP3-353H6 on chromosome Xq25-26.2 Contains the 3' end of the SMARCA1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily a, member 1) and aribosomal protein S26 (RPS26) pseudogene, complete sequence Length = 147394 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 123 tcccctcacctcctaacctc 142 |||||||||||||||||||| Sbjct: 64332 tcccctcacctcctaacctc 64313
>emb|AJ720043.1| Gallus gallus mRNA for hypothetical protein, clone 9n8 Length = 961 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cgttcaataaagccccgtgt 562 |||||||||||||||||||| Sbjct: 916 cgttcaataaagccccgtgt 935
>emb|AL117530.1|HSM801054 Homo sapiens mRNA; cDNA DKFZp434B172 (from clone DKFZp434B172) Length = 2658 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acaaagttctcccactctgc 409 |||||||||||||||||||| Sbjct: 1655 acaaagttctcccactctgc 1636
>gb|AC123512.4| Homo sapiens 12 BAC RP11-24B21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86706 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 tcattatcttcatcaaggag 377 |||||||||||||||||||| Sbjct: 32489 tcattatcttcatcaaggag 32470
>gb|AC068953.9| Homo sapiens chromosome 8, clone CTD1-2019D9, complete sequence Length = 176997 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 426 tcttgattcacatcagcatctgaa 449 |||| ||||||||||||||||||| Sbjct: 14638 tcttcattcacatcagcatctgaa 14615
>ref|XM_945741.1| PREDICTED: Homo sapiens hypothetical protein LOC339903, transcript variant 5 (LOC339903), mRNA Length = 2120 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acaaagttctcccactctgc 409 |||||||||||||||||||| Sbjct: 1105 acaaagttctcccactctgc 1086
>ref|XM_934359.1| PREDICTED: Homo sapiens chromosome 3 open reading frame 41, transcript variant 5 (C3orf41), mRNA Length = 2120 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acaaagttctcccactctgc 409 |||||||||||||||||||| Sbjct: 1105 acaaagttctcccactctgc 1086
>gb|AC092042.2| Homo sapiens chromosome 3 clone RP11-136C24, complete sequence Length = 171974 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 390 acaaagttctcccactctgc 409 |||||||||||||||||||| Sbjct: 95643 acaaagttctcccactctgc 95624
>gb|BT024464.1| Arabidopsis thaliana At4g33000 mRNA, complete cds Length = 741 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 689 tcctttaggtaaggaagagtcatattcttcaacaag 654
>emb|BX934052.2| Gallus gallus finished cDNA, clone ChEST59f15 Length = 1501 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cgttcaataaagccccgtgt 562 |||||||||||||||||||| Sbjct: 1472 cgttcaataaagccccgtgt 1491
>gb|AF490607.1| Arabidopsis thaliana calcineurin B-like protein 10 (CBL10) mRNA, complete cds Length = 771 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 719 tcctttaggtaaggaagagtcatattcttcaacaag 684
>gb|AC018554.7| Homo sapiens chromosome 16 clone RP11-457D20, complete sequence Length = 216977 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 562 ttgtccatatcatatagctt 581 |||||||||||||||||||| Sbjct: 151032 ttgtccatatcatatagctt 151051
>gb|AC124420.4| Mus musculus BAC clone RP24-322N8 from chromosome 12, complete sequence Length = 164950 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 584 aggaaaaatcaattttctct 603 |||||||||||||||||||| Sbjct: 8163 aggaaaaatcaattttctct 8182
>gb|AC131072.13| Mus musculus chromosome 1, clone RP23-396F21, complete sequence Length = 192542 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 19 atttgatgcctggcactaacattg 42 ||||||| |||||||||||||||| Sbjct: 87725 atttgattcctggcactaacattg 87702
>emb|BX934352.1| Gallus gallus finished cDNA, clone ChEST666h21 Length = 969 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 543 cgttcaataaagccccgtgt 562 |||||||||||||||||||| Sbjct: 943 cgttcaataaagccccgtgt 962
>gb|AC090806.12| Homo sapiens chromosome 8, clone RP11-94A24, complete sequence Length = 131196 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ctctatctatttttccatct 428 |||||||||||||||||||| Sbjct: 30054 ctctatctatttttccatct 30035
>gb|AY135691.1| Mus musculus argonaute 5 protein (Ago5) gene, partial cds Length = 43977 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 aaccctcccctcacctcctaacctcatt 145 |||||| |||| |||||||||||||||| Sbjct: 6008 aacccttccctaacctcctaacctcatt 5981
>dbj|AB158556.1| Paralichthys olivaceus pre-mRNA, containing exons for immunoglobulin M and immunoglobulin D, partial cds Length = 4320 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 atcttgattcacatcagcat 444 |||||||||||||||||||| Sbjct: 4012 atcttgattcacatcagcat 3993
>dbj|AK117439.1| Arabidopsis thaliana At4g33000 mRNA for unknown protein, complete cds, clone: RAFL17-04-E20 Length = 1058 Score = 40.1 bits (20), Expect = 9.3 Identities = 32/36 (88%) Strand = Plus / Minus Query: 339 tcctttaggtatggaagagtcattatcttcatcaag 374 ||||||||||| ||||||||||| |||||| |||| Sbjct: 756 tcctttaggtaaggaagagtcatattcttcaacaag 721
>emb|BX470203.6| Mouse DNA sequence from clone RP23-290J11 on chromosome X, complete sequence Length = 53518 Score = 40.1 bits (20), Expect = 9.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 118 aaccctcccctcacctcctaacctcatt 145 |||||| |||| |||||||||||||||| Sbjct: 30329 aacccttccctaacctcctaacctcatt 30302
>dbj|AB052658.1| Paralichthys olivaceus mRNA for immunoglobulin D, complete cds Length = 3244 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 425 atcttgattcacatcagcat 444 |||||||||||||||||||| Sbjct: 2936 atcttgattcacatcagcat 2917
>gb|AF071160.1|AF071160 Anopheles gambiae glutathione S-transferase (GST1a) gene, alternative splice products, complete cds Length = 4416 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 583 aaggaaaaatcaattttctc 602 |||||||||||||||||||| Sbjct: 723 aaggaaaaatcaattttctc 742
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 287 gatgtcgtcgaccttcgagt 306 |||||||||||||||||||| Sbjct: 747592 gatgtcgtcgaccttcgagt 747611
>gb|AC152181.1| Mus musculus BAC clone RP24-321P19 from 15, complete sequence Length = 187733 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 434 cacatcagcatctgaaaatg 453 |||||||||||||||||||| Sbjct: 36771 cacatcagcatctgaaaatg 36752
>gb|AC159190.2| Mus musculus BAC clone RP24-168J2 from chromosome 13, complete sequence Length = 158627 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 aggaaaaatcaattttctct 603 |||||||||||||||||||| Sbjct: 36769 aggaaaaatcaattttctct 36750
>gb|AC152971.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNOa0023G10, complete sequence Length = 36253 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 409 ctctatctatttttccatct 428 |||||||||||||||||||| Sbjct: 13986 ctctatctatttttccatct 13967
>dbj|AP004217.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1137H10 Length = 142432 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 426 tcttgattcacatcagcatctgaa 449 |||| ||||||||||||||||||| Sbjct: 16352 tcttcattcacatcagcatctgaa 16375
>dbj|AP003786.2| Homo sapiens genomic DNA, chromosome 8q23, clone:KB1018C4, complete sequence Length = 174667 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 409 ctctatctatttttccatct 428 |||||||||||||||||||| Sbjct: 143199 ctctatctatttttccatct 143218 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,816,768 Number of Sequences: 3902068 Number of extensions: 6816768 Number of successful extensions: 144683 Number of sequences better than 10.0: 81 Number of HSP's better than 10.0 without gapping: 80 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 144404 Number of HSP's gapped (non-prelim): 272 length of query: 679 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 656 effective length of database: 17,143,297,704 effective search space: 11246003293824 effective search space used: 11246003293824 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)