ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22k14
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_190209.1| Oryza sativa (japonica cultivar-group), predic... 228 2e-56
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
3dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic D... 228 2e-56
4dbj|AK103621.1| Oryza sativa (japonica cultivar-group) cDNA clon... 220 4e-54
5gb|AY111384.1| Zea mays CL13128_1 mRNA sequence 141 3e-30
6ref|NM_105436.2| Arabidopsis thaliana unknown protein AT1G67680 ... 62 2e-06
7emb|BX815577.1|CNS0AATK Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
8gb|BT005156.1| Arabidopsis thaliana clone U20370 unknown protein... 62 2e-06
9gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana... 62 2e-06
10gb|BT003859.1| Arabidopsis thaliana clone RAFL14-88-B17 (R20370)... 62 2e-06
11gb|BT013717.1| Lycopersicon esculentum clone 132563F, mRNA sequence 50 0.008
12gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosom... 44 0.50
13gb|AC102447.11| Mus musculus chromosome 7, clone RP24-206D20, co... 42 2.0
14gb|AC093195.2| Drosophila melanogaster clone BACR16J09, complete... 42 2.0
15gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete... 42 2.0
16gb|BT012479.1| Drosophila melanogaster RE13884 full insert cDNA 42 2.0
17ref|XM_001001377.1| PREDICTED: Mus musculus similar to putative ... 42 2.0
18ref|XR_004009.1| PREDICTED: Mus musculus similar to putative phe... 42 2.0
19ref|XM_893241.2| PREDICTED: Mus musculus similar to putative phe... 42 2.0
20ref|XM_001002506.1| PREDICTED: Mus musculus similar to putative ... 42 2.0
21ref|XM_913674.1| PREDICTED: Mus musculus similar to putative phe... 42 2.0
22ref|XM_913648.2| PREDICTED: Mus musculus similar to putative phe... 42 2.0
23ref|XM_674180.1| Plasmodium berghei strain ANKA hypothetical pro... 42 2.0
24gb|AC158569.7| Mus musculus chromosome 7, clone RP24-65P20, comp... 42 2.0
25ref|NM_001013490.1| Danio rerio zgc:113149 (zgc:113149), mRNA 42 2.0
26ref|NM_164772.1| Drosophila melanogaster CG14536-RA, transcript ... 42 2.0
27ref|NM_135307.2| Drosophila melanogaster CG14536-RB, transcript ... 42 2.0
28gb|AY069709.1| Drosophila melanogaster LD48048 full length cDNA 42 2.0
29ref|XM_685426.1| PREDICTED: Danio rerio similar to RIKEN cDNA 49... 42 2.0
30ref|XM_685219.1| PREDICTED: Danio rerio similar to Calpain small... 42 2.0
31gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, r... 42 2.0
32gb|BC090455.1| Danio rerio zgc:113149, mRNA (cDNA clone MGC:1131... 42 2.0
33emb|BX572082.4| Mouse DNA sequence from clone RP23-114B24 on chr... 42 2.0
34gb|AC102606.12| Mus musculus chromosome 7, clone RP23-390N24, co... 42 2.0
35emb|BX537104.9| Zebrafish DNA sequence from clone DKEY-80G18 in ... 42 2.0
36gb|AE003618.3| Drosophila melanogaster chromosome 2L, section 27... 42 2.0
37emb|BX004776.4| Zebrafish DNA sequence from clone CH211-137A8 in... 42 2.0
38gb|AC004722.1|AC004722 Drosophila melanogaster DNA sequence (P1 ... 42 2.0
39gb|AF022251.1|AF022251 Mus musculus calcium-sensing receptor rel... 42 2.0
40emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on ch... 42 2.0
41gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, co... 40 7.8
42gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, co... 40 7.8
43gb|L21713.1|PFA93K Plasmodium chabaudi putative glutamate and as... 40 7.8
44gb|BC082373.1| Xenopus laevis MGC81656 protein, mRNA (cDNA clone... 40 7.8
45gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's ... 40 7.8
46gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 7.8
47emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 i... 40 7.8
48gb|AC117639.7| Mus musculus chromosome 10, clone RP23-225H6, com... 40 7.8
49ref|XM_735442.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 7.8
50emb|BX323862.18| Zebrafish DNA sequence from clone DKEYP-97A5 in... 40 7.8
51emb|AL391356.22| Human DNA sequence from clone RP11-100A13 on ch... 40 7.8
52emb|AL356479.12| Human DNA sequence from clone RP11-48A6 on chro... 40 7.8
53emb|AJ721090.1| Gallus gallus mRNA for hypothetical protein, clo... 40 7.8
54gb|AC096538.2| Homo sapiens chromosome 1 clone RP11-146P11, comp... 40 7.8
55gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, comp... 40 7.8
56gb|AC091996.3| Homo sapiens chromosome 5 clone RP11-96G10, compl... 40 7.8
57gb|AF155773.3| Gibberella moniliformis fumonisin biosynthetic ge... 40 7.8
58gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complet... 40 7.8
59gb|AC009971.8| Homo sapiens BAC clone RP11-443F4 from 2, complet... 40 7.8
60gb|AC026126.19|AC026126 Homo sapiens 12 BAC RP11-19K10 (Roswell ... 40 7.8
61emb|Y07757.1|CCJR10 C.coturnix japonica mRNA for R10 protein 40 7.8
62gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome 40 7.8
63emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 ... 40 7.8
64gb|AC153897.4| Mus musculus 10 BAC RP23-119E2 (Roswell Park Canc... 40 7.8
65dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CT... 40 7.8
66emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chr... 40 7.8
67dbj|AB047036.1| Halocynthia roretzi HrZF-2 mRNA, partial cds 40 7.8 
>ref|NM_190209.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2052

 Score =  228 bits (115), Expect = 2e-56
 Identities = 166/183 (90%)
 Strand = Plus / Minus

                                                                        
Query: 251  cacagctccttgagcacctctgacctgagccctcttatccttcctcttcggacggtaggt 310
            |||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |
Sbjct: 1923 cacagctccttgagcacctctgacctgagccctcttatccttcctctttgggcggtaact 1864

                                                                        
Query: 311  cgacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgg 370
             |||| ||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 1863 tgaccgctctctcttgggtagccatctctccggatctggtggtggccctgggtttgctgg 1804

                                                                        
Query: 371  atcatatcctttcggatatttaggtttcctctttctcttcttagccttttgcttcttcac 430
            |||| | |||||||| ||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1803 atcaaagcctttcgggtatctaggtttcctcttcctcttcttagccttctgcttcttcac 1744

               
Query: 431  ttc 433
            |||
Sbjct: 1743 ttc 1741



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                        
Query: 469  gccttgcaccagatgtcttctccaggctctttacgtcaattccctgaagacccggcaacg 528
            ||||||||||||| || |||||||||||||  || | ||||||||  ||||| ||||| |
Sbjct: 1699 gccttgcaccagaagttttctccaggctctcaacattaattcccttgagacctggcaatg 1640

                                                   
Query: 529  gtttcagctgcttctcatattgctcagctttcgcaaggt 567
            ||||||| | ||||||||| || ||||||||| ||||||
Sbjct: 1639 gtttcagtttcttctcatactgttcagctttctcaaggt 1601



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 129  ctcgacttcttcttccgcgacttgttggagcccttcgatggttctgg 175
            ||||| || |||||||| ||||||||||| ||||| | |||||||||
Sbjct: 2048 ctcgattttttcttccgggacttgttggaaccctttggtggttctgg 2002
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  228 bits (115), Expect = 2e-56
 Identities = 166/183 (90%)
 Strand = Plus / Minus

                                                                            
Query: 251      cacagctccttgagcacctctgacctgagccctcttatccttcctcttcggacggtaggt 310
                |||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |
Sbjct: 38647519 cacagctccttgagcacctctgacctgagccctcttatccttcctctttgggcggtaact 38647460

                                                                            
Query: 311      cgacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgg 370
                 |||| ||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 38647459 tgaccgctctctcttgggtagccatctctccggatctggtggtggccctgggtttgctgg 38647400

                                                                            
Query: 371      atcatatcctttcggatatttaggtttcctctttctcttcttagccttttgcttcttcac 430
                |||| | |||||||| ||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 38647399 atcaaagcctttcgggtatctaggtttcctcttcctcttcttagccttctgcttcttcac 38647340

                   
Query: 431      ttc 433
                |||
Sbjct: 38647339 ttc 38647337



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                            
Query: 469      gccttgcaccagatgtcttctccaggctctttacgtcaattccctgaagacccggcaacg 528
                ||||||||||||| || |||||||||||||  || | ||||||||  ||||| ||||| |
Sbjct: 38647295 gccttgcaccagaagttttctccaggctctcaacattaattcccttgagacctggcaatg 38647236

                                                       
Query: 529      gtttcagctgcttctcatattgctcagctttcgcaaggt 567
                ||||||| | ||||||||| || ||||||||| ||||||
Sbjct: 38647235 gtttcagtttcttctcatactgttcagctttctcaaggt 38647197



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                               
Query: 129      ctcgacttcttcttccgcgacttgttggagcccttcgatggttctgg 175
                ||||| || |||||||| ||||||||||| ||||| | |||||||||
Sbjct: 38647644 ctcgattttttcttccgggacttgttggaaccctttggtggttctgg 38647598
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>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1099D03
          Length = 191022

 Score =  228 bits (115), Expect = 2e-56
 Identities = 166/183 (90%)
 Strand = Plus / Minus

                                                                          
Query: 251    cacagctccttgagcacctctgacctgagccctcttatccttcctcttcggacggtaggt 310
              |||||||||||||||||||||||||||||||||||||||||||||||| || |||||  |
Sbjct: 105492 cacagctccttgagcacctctgacctgagccctcttatccttcctctttgggcggtaact 105433

                                                                          
Query: 311    cgacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgg 370
               |||| ||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 105432 tgaccgctctctcttgggtagccatctctccggatctggtggtggccctgggtttgctgg 105373

                                                                          
Query: 371    atcatatcctttcggatatttaggtttcctctttctcttcttagccttttgcttcttcac 430
              |||| | |||||||| ||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 105372 atcaaagcctttcgggtatctaggtttcctcttcctcttcttagccttctgcttcttcac 105313

                 
Query: 431    ttc 433
              |||
Sbjct: 105312 ttc 105310



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 84/99 (84%)
 Strand = Plus / Minus

                                                                          
Query: 469    gccttgcaccagatgtcttctccaggctctttacgtcaattccctgaagacccggcaacg 528
              ||||||||||||| || |||||||||||||  || | ||||||||  ||||| ||||| |
Sbjct: 105268 gccttgcaccagaagttttctccaggctctcaacattaattcccttgagacctggcaatg 105209

                                                     
Query: 529    gtttcagctgcttctcatattgctcagctttcgcaaggt 567
              ||||||| | ||||||||| || ||||||||| ||||||
Sbjct: 105208 gtttcagtttcttctcatactgttcagctttctcaaggt 105170



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 129    ctcgacttcttcttccgcgacttgttggagcccttcgatggttctgg 175
              ||||| || |||||||| ||||||||||| ||||| | |||||||||
Sbjct: 105617 ctcgattttttcttccgggacttgttggaaccctttggtggttctgg 105571
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>dbj|AK103621.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133M12, full
            insert sequence
          Length = 2269

 Score =  220 bits (111), Expect = 4e-54
 Identities = 165/183 (90%)
 Strand = Plus / Minus

                                                                        
Query: 251  cacagctccttgagcacctctgacctgagccctcttatccttcctcttcggacggtaggt 310
            ||||||||||||||||||||||||||||| |||||||||||||||||| || |||||  |
Sbjct: 1928 cacagctccttgagcacctctgacctgagtcctcttatccttcctctttgggcggtaact 1869

                                                                        
Query: 311  cgacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgg 370
             |||| ||| |||||||| ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 1868 tgaccgctctctcttgggtagccatctctccggatctggtggtggccctgggtttgctgg 1809

                                                                        
Query: 371  atcatatcctttcggatatttaggtttcctctttctcttcttagccttttgcttcttcac 430
            |||| | |||||||| ||| ||||||||||||| |||||||||||||| |||||||||||
Sbjct: 1808 atcaaagcctttcgggtatctaggtttcctcttcctcttcttagccttctgcttcttcac 1749

               
Query: 431  ttc 433
            |||
Sbjct: 1748 ttc 1746



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 83/99 (83%)
 Strand = Plus / Minus

                                                                        
Query: 469  gccttgcaccagatgtcttctccaggctctttacgtcaattccctgaagacccggcaacg 528
            ||||||||||||| || |||||||||||||  || | ||||||||  |||||  |||| |
Sbjct: 1704 gccttgcaccagaagttttctccaggctctcaacattaattcccttgagaccttgcaatg 1645

                                                   
Query: 529  gtttcagctgcttctcatattgctcagctttcgcaaggt 567
            ||||||| | ||||||||| || ||||||||| ||||||
Sbjct: 1644 gtttcagtttcttctcatactgttcagctttctcaaggt 1606



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 129  ctcgacttcttcttccgcgacttgttggagcccttcgatggttctgg 175
            ||||| || |||||||| ||||||||||| ||||| | |||||||||
Sbjct: 2053 ctcgattttttcttccgggacttgttggaaccctttggtggttctgg 2007
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>gb|AY111384.1| Zea mays CL13128_1 mRNA sequence
          Length = 687

 Score =  141 bits (71), Expect = 3e-30
 Identities = 110/123 (89%)
 Strand = Plus / Plus

                                                                       
Query: 251 cacagctccttgagcacctctgacctgagccctcttatccttcctcttcggacggtaggt 310
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||  |
Sbjct: 327 cacagctccttgagcacctctgacctgagccctcttatccttcctctttggacggtaact 386

                                                                       
Query: 311 cgacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgg 370
            |||| ||| ||| | |||||||||||||| |||||||| || ||||| ||||| |||||
Sbjct: 387 ggaccgctctctccttggcagccatctctcgggatctggaggcggccccgggtttgctgg 446

              
Query: 371 atc 373
           |||
Sbjct: 447 atc 449



 Score = 60.0 bits (30), Expect = 8e-06
 Identities = 33/34 (97%)
 Strand = Plus / Plus

                                             
Query: 465 acatgccttgcaccagatgtcttctccaggctct 498
           |||||||||||||||||||||||||||| |||||
Sbjct: 547 acatgccttgcaccagatgtcttctccaagctct 580
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>ref|NM_105436.2| Arabidopsis thaliana unknown protein AT1G67680 mRNA, complete cds
          Length = 2258

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  gacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgga 371
            ||||| |||||  |||| ||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 1871 gacctttcccttctgggaagccacctttcagggtctgggggtggacctgggtttgccgga 1812

                                                   
Query: 372  tcatatcctttcggatatttaggtttcctctttctcttc 410
            ||| ||||||| ||||| || || || ||||| ||||||
Sbjct: 1811 tcaaatcctttgggatactttggctttctcttcctcttc 1773
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>emb|BX815577.1|CNS0AATK Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS72ZF09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2132

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  gacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgga 371
            ||||| |||||  |||| ||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 1850 gacctttcccttctgggaagccacctttcagggtctgggggtggacctgggtttgccgga 1791

                                                   
Query: 372  tcatatcctttcggatatttaggtttcctctttctcttc 410
            ||| ||||||| ||||| || || || ||||| ||||||
Sbjct: 1790 tcaaatcctttgggatactttggctttctcttcctcttc 1752
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>gb|BT005156.1| Arabidopsis thaliana clone U20370 unknown protein (At1g67680) mRNA,
            complete cds
          Length = 2026

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  gacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgga 371
            ||||| |||||  |||| ||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 1814 gacctttcccttctgggaagccacctttcagggtctgggggtggacctgggtttgccgga 1755

                                                   
Query: 372  tcatatcctttcggatatttaggtttcctctttctcttc 410
            ||| ||||||| ||||| || || || ||||| ||||||
Sbjct: 1754 tcaaatcctttgggatactttggctttctcttcctcttc 1716
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>gb|AC008113.4|AC008113 Genomic sequence for Arabidopsis thaliana BAC F12A21 from chromosome I,
             complete sequence
          Length = 114190

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                         
Query: 312   gacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgga 371
             ||||| |||||  |||| ||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 77221 gacctttcccttctgggaagccacctttcagggtctgggggtggacctgggtttgccgga 77162

                                                    
Query: 372   tcatatcctttcggatatttaggtttcctctttctcttc 410
             ||| ||||||| ||||| || || || ||||| ||||||
Sbjct: 77161 tcaaatcctttgggatactttggctttctcttcctcttc 77123
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>gb|BT003859.1| Arabidopsis thaliana clone RAFL14-88-B17 (R20370) unknown protein
            (At1g67680) mRNA, complete cds
          Length = 2281

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 82/99 (82%)
 Strand = Plus / Minus

                                                                        
Query: 312  gacctctccctcttgggcagccatctctcaggatctgggggtggccctgggttcgctgga 371
            ||||| |||||  |||| ||||| || ||||| ||||||||||| |||||||| || |||
Sbjct: 1876 gacctttcccttctgggaagccacctttcagggtctgggggtggacctgggtttgccgga 1817

                                                   
Query: 372  tcatatcctttcggatatttaggtttcctctttctcttc 410
            ||| ||||||| ||||| || || || ||||| ||||||
Sbjct: 1816 tcaaatcctttgggatactttggctttctcttcctcttc 1778
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>gb|BT013717.1| Lycopersicon esculentum clone 132563F, mRNA sequence
          Length = 1924

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                        
Query: 282  ctcttatccttcctcttcggacggtaggtcgacctctccctcttgggcagccatctctca 341
            ||||||||||| ||||| || | |||  | ||||||||||||||||| ||||| ||||| 
Sbjct: 1613 ctcttatcctttctctttggtctgtaactagacctctccctcttgggaagccacctctct 1554

                 
Query: 342  ggatc 346
            |||||
Sbjct: 1553 ggatc 1549
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>gb|AC152452.3| Mus musculus BAC clone RP24-279M22 from chromosome 9, complete sequence
          Length = 176943

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 454   tggcttgctctacatgccttgc 475
             ||||||||||||||||||||||
Sbjct: 65500 tggcttgctctacatgccttgc 65479
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>gb|AC102447.11| Mus musculus chromosome 7, clone RP24-206D20, complete sequence
          Length = 176911

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 237   tgcttctctctactcacagct 257
             |||||||||||||||||||||
Sbjct: 54118 tgcttctctctactcacagct 54138
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>gb|AC093195.2| Drosophila melanogaster clone BACR16J09, complete sequence
          Length = 178863

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    tggcactggcattggcagcag 228
              |||||||||||||||||||||
Sbjct: 147731 tggcactggcattggcagcag 147751
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>gb|AC008328.6| Drosophila melanogaster clone BACR09A04, complete sequence
          Length = 166722

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    tggcactggcattggcagcag 228
              |||||||||||||||||||||
Sbjct: 105978 tggcactggcattggcagcag 105998
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>gb|BT012479.1| Drosophila melanogaster RE13884 full insert cDNA
          Length = 2103

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tggcactggcattggcagcag 228
           |||||||||||||||||||||
Sbjct: 879 tggcactggcattggcagcag 859
to top
>ref|XM_001001377.1| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC637852), mRNA
          Length = 942

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tgcttctctctactcacagct 257
           |||||||||||||||||||||
Sbjct: 136 tgcttctctctactcacagct 156
to top
>ref|XR_004009.1| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC672790), mRNA
          Length = 2459

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tgcttctctctactcacagct 257
            |||||||||||||||||||||
Sbjct: 1651 tgcttctctctactcacagct 1671
to top
>ref|XM_893241.2| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC628490), mRNA
          Length = 942

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tgcttctctctactcacagct 257
           |||||||||||||||||||||
Sbjct: 136 tgcttctctctactcacagct 156
to top
>ref|XM_001002506.1| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC637873), mRNA
          Length = 2457

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tgcttctctctactcacagct 257
            |||||||||||||||||||||
Sbjct: 1651 tgcttctctctactcacagct 1671
to top
>ref|XM_913674.1| PREDICTED: Mus musculus similar to putative pheromone receptor
            (Go-VN5) (LOC637873), mRNA
          Length = 2457

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 237  tgcttctctctactcacagct 257
            |||||||||||||||||||||
Sbjct: 1651 tgcttctctctactcacagct 1671
to top
>ref|XM_913648.2| PREDICTED: Mus musculus similar to putative pheromone receptor
           (Go-VN5) (LOC637852), mRNA
          Length = 942

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tgcttctctctactcacagct 257
           |||||||||||||||||||||
Sbjct: 136 tgcttctctctactcacagct 156
to top
>ref|XM_674180.1| Plasmodium berghei strain ANKA hypothetical protein (PB106659.00.0)
           partial mRNA
          Length = 330

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 372 tcatatcctttcggatattta 392
           |||||||||||||||||||||
Sbjct: 182 tcatatcctttcggatattta 162
to top
>gb|AC158569.7| Mus musculus chromosome 7, clone RP24-65P20, complete sequence
          Length = 177045

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   tgcttctctctactcacagct 257
             |||||||||||||||||||||
Sbjct: 72692 tgcttctctctactcacagct 72672
to top
>ref|NM_001013490.1| Danio rerio zgc:113149 (zgc:113149), mRNA
          Length = 2185

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 204 gaggtggcactggcattggca 224
           |||||||||||||||||||||
Sbjct: 766 gaggtggcactggcattggca 746
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>ref|NM_164772.1| Drosophila melanogaster CG14536-RA, transcript variant A (CG14536),
           mRNA
          Length = 2354

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tggcactggcattggcagcag 228
           |||||||||||||||||||||
Sbjct: 908 tggcactggcattggcagcag 888
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>ref|NM_135307.2| Drosophila melanogaster CG14536-RB, transcript variant B (CG14536),
           mRNA
          Length = 2290

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tggcactggcattggcagcag 228
           |||||||||||||||||||||
Sbjct: 844 tggcactggcattggcagcag 824
to top
>gb|AY069709.1| Drosophila melanogaster LD48048 full length cDNA
          Length = 2384

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 208 tggcactggcattggcagcag 228
           |||||||||||||||||||||
Sbjct: 846 tggcactggcattggcagcag 826
to top
>ref|XM_685426.1| PREDICTED: Danio rerio similar to RIKEN cDNA 4933440H19
           (LOC573159), mRNA
          Length = 2117

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 204 gaggtggcactggcattggca 224
           |||||||||||||||||||||
Sbjct: 756 gaggtggcactggcattggca 736
to top
>ref|XM_685219.1| PREDICTED: Danio rerio similar to Calpain small subunit 1 (CSS1)
            (Calcium-dependent protease small subunit 1)
            (Calcium-dependent protease small subunit) (CDPS)
            (Calpain regulatory subunit) (Calcium-activated neutral
            proteinase small subunit) (CANP small subunit)...
            (LOC573137), mRNA
          Length = 2474

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 204  gaggtggcactggcattggca 224
            |||||||||||||||||||||
Sbjct: 1138 gaggtggcactggcattggca 1118
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>gb|AC008329.3|AC008329 Drosophila melanogaster, chromosome 2L, region 28C-28D, BAC clone
            BACR31D05, complete sequence
          Length = 172633

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 208  tggcactggcattggcagcag 228
            |||||||||||||||||||||
Sbjct: 6735 tggcactggcattggcagcag 6755
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>gb|BC090455.1| Danio rerio zgc:113149, mRNA (cDNA clone MGC:113149 IMAGE:7140622),
           complete cds
          Length = 2185

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 204 gaggtggcactggcattggca 224
           |||||||||||||||||||||
Sbjct: 766 gaggtggcactggcattggca 746
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>emb|BX572082.4| Mouse DNA sequence from clone RP23-114B24 on chromosome X, complete
             sequence
          Length = 88681

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 79    tgtcttttatatattgttaatttgt 103
             ||||||||||||||| |||||||||
Sbjct: 13650 tgtcttttatatatttttaatttgt 13674
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>gb|AC102606.12| Mus musculus chromosome 7, clone RP23-390N24, complete sequence
          Length = 188836

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 237   tgcttctctctactcacagct 257
             |||||||||||||||||||||
Sbjct: 29956 tgcttctctctactcacagct 29936
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>emb|BX537104.9| Zebrafish DNA sequence from clone DKEY-80G18 in linkage group 15,
             complete sequence
          Length = 198108

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 204   gaggtggcactggcattggca 224
             |||||||||||||||||||||
Sbjct: 30125 gaggtggcactggcattggca 30105
to top
>gb|AE003618.3| Drosophila melanogaster chromosome 2L, section 27 of 83 of the complete
              sequence
          Length = 268661

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 208    tggcactggcattggcagcag 228
              |||||||||||||||||||||
Sbjct: 245725 tggcactggcattggcagcag 245745
to top
>emb|BX004776.4| Zebrafish DNA sequence from clone CH211-137A8 in linkage group 15,
             complete sequence
          Length = 195462

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 204   gaggtggcactggcattggca 224
             |||||||||||||||||||||
Sbjct: 59859 gaggtggcactggcattggca 59879
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>gb|AC004722.1|AC004722 Drosophila melanogaster DNA sequence (P1 DS02760 (D286)), complete
             sequence
          Length = 76619

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 208   tggcactggcattggcagcag 228
             |||||||||||||||||||||
Sbjct: 48733 tggcactggcattggcagcag 48753
to top
>gb|AF022251.1|AF022251 Mus musculus calcium-sensing receptor related protein 2 (Casr-rs2)
           gene, partial cds
          Length = 1380

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 237 tgcttctctctactcacagct 257
           |||||||||||||||||||||
Sbjct: 545 tgcttctctctactcacagct 565
to top
>emb|AL691475.18| Mouse DNA sequence from clone RP23-264P11 on chromosome 4 Contains part
             of the Astn2 gene for astrotactin 2 and a CpG island,
             complete sequence
          Length = 174567

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 450   ttcatggcttgctctacatgc 470
             |||||||||||||||||||||
Sbjct: 13109 ttcatggcttgctctacatgc 13129
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>gb|AC111028.10| Mus musculus chromosome 8, clone RP23-221P20, complete sequence
          Length = 193256

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   cttcttagccttttgcttcttcac 430
             ||||||||||| ||||||||||||
Sbjct: 33085 cttcttagcctcttgcttcttcac 33062
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>gb|AC138300.8| Mus musculus chromosome 14, clone RP23-187B20, complete sequence
          Length = 213955

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 209   ggcactggcattggcagcag 228
             ||||||||||||||||||||
Sbjct: 49892 ggcactggcattggcagcag 49911
to top
>gb|L21713.1|PFA93K Plasmodium chabaudi putative glutamate and asparagine rich protein
            gene, partial cds
          Length = 2112

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 37   aataacacaaaaactccaaa 56
            ||||||||||||||||||||
Sbjct: 1871 aataacacaaaaactccaaa 1852
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>gb|BC082373.1| Xenopus laevis MGC81656 protein, mRNA (cDNA clone MGC:81656
            IMAGE:6864423), complete cds
          Length = 2457

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 405  ctcttcttagccttttgctt 424
            ||||||||||||||||||||
Sbjct: 1907 ctcttcttagccttttgctt 1926
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>gb|AC114434.4| Rattus norvegicus 1 BAC CH230-210C18 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 127883

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   ttttgcttcttcacttcctc 436
             ||||||||||||||||||||
Sbjct: 60359 ttttgcttcttcacttcctc 60378
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 418     tttgcttcttcacttcctcc 437
               ||||||||||||||||||||
Sbjct: 2535141 tttgcttcttcacttcctcc 2535122
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>emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 in linkage group 9,
             complete sequence
          Length = 149874

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 31    aatgcaaataacacaaaaac 50
             ||||||||||||||||||||
Sbjct: 63123 aatgcaaataacacaaaaac 63142
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>gb|AC117639.7| Mus musculus chromosome 10, clone RP23-225H6, complete sequence
          Length = 217522

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 87     atatattgttaatttgtgac 106
              ||||||||||||||||||||
Sbjct: 190719 atatattgttaatttgtgac 190700
to top
>ref|XM_735442.1| Plasmodium chabaudi chabaudi hypothetical protein (PC300294.00.0)
            partial mRNA
          Length = 1053

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aataacacaaaaactccaaa 56
            ||||||||||||||||||||
Sbjct: 982  aataacacaaaaactccaaa 1001
to top
>emb|BX323862.18| Zebrafish DNA sequence from clone DKEYP-97A5 in linkage group 6, complete
              sequence
          Length = 184810

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 281    cctcttatccttcctcttcg 300
              ||||||||||||||||||||
Sbjct: 163285 cctcttatccttcctcttcg 163266
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>emb|AL391356.22| Human DNA sequence from clone RP11-100A13 on chromosome 10 Contains a
             neurofilament 3 (NEF3) pseudogene and part of a novel
             gene, complete sequence
          Length = 65377

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 546   tattgctcagctttcgcaag 565
             ||||||||||||||||||||
Sbjct: 35731 tattgctcagctttcgcaag 35712
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>emb|AL356479.12| Human DNA sequence from clone RP11-48A6 on chromosome 1p21.3-22.3
             Contains the 5' end of a novel gene, complete sequence
          Length = 128142

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   ggtttcctctttctcttctt 412
             ||||||||||||||||||||
Sbjct: 53418 ggtttcctctttctcttctt 53437
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>emb|AJ721090.1| Gallus gallus mRNA for hypothetical protein, clone 34n23
          Length = 1892

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 207 gtggcactggcattggcagc 226
           ||||||||||||||||||||
Sbjct: 623 gtggcactggcattggcagc 604
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>gb|AC096538.2| Homo sapiens chromosome 1 clone RP11-146P11, complete sequence
          Length = 173048

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 393   ggtttcctctttctcttctt 412
             ||||||||||||||||||||
Sbjct: 30200 ggtttcctctttctcttctt 30219
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>gb|AC104576.5| Homo sapiens chromosome 8, clone RP11-790L1, complete sequence
          Length = 174399

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 274   cctgagccctcttatccttc 293
             ||||||||||||||||||||
Sbjct: 96724 cctgagccctcttatccttc 96705
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>gb|AC091996.3| Homo sapiens chromosome 5 clone RP11-96G10, complete sequence
          Length = 182797

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 389   tttaggtttcctctttctcttctt 412
             |||| |||||||||||||||||||
Sbjct: 61375 tttatgtttcctctttctcttctt 61352
to top
>gb|AF155773.3| Gibberella moniliformis fumonisin biosynthetic gene cluster, complete
             sequence
          Length = 75658

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aagacctcgacttcttcttc 143
             ||||||||||||||||||||
Sbjct: 29461 aagacctcgacttcttcttc 29480
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>gb|AC110296.3| Homo sapiens BAC clone RP11-120A1 from 4, complete sequence
          Length = 132626

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tatttaggtttcctctttct 406
             ||||||||||||||||||||
Sbjct: 77781 tatttaggtttcctctttct 77762
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>gb|AC009971.8| Homo sapiens BAC clone RP11-443F4 from 2, complete sequence
          Length = 195915

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 388   atttaggtttcctctttctcttct 411
             ||||||| ||||||||||||||||
Sbjct: 45385 atttagggttcctctttctcttct 45362
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>gb|AC026126.19|AC026126 Homo sapiens 12 BAC RP11-19K10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 144427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 388   atttaggtttcctctttctcttct 411
             ||||||| ||||||||||||||||
Sbjct: 30790 atttagggttcctctttctcttct 30767
to top
>emb|Y07757.1|CCJR10 C.coturnix japonica mRNA for R10 protein
          Length = 2389

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 207  gtggcactggcattggcagc 226
            ||||||||||||||||||||
Sbjct: 1050 gtggcactggcattggcagc 1031
to top
>gb|CP000033.1| Lactobacillus acidophilus NCFM, complete genome
          Length = 1993564

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 163    tcgatggttctggagccttggccg 186
              ||||||||||||||||||| ||||
Sbjct: 117751 tcgatggttctggagccttagccg 117728
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>emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 in linkage group 8,
             complete sequence
          Length = 160594

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 37    aataacacaaaaactccaaa 56
             ||||||||||||||||||||
Sbjct: 81259 aataacacaaaaactccaaa 81240
to top
>gb|AC153897.4| Mus musculus 10 BAC RP23-119E2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 209755

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     atatattgttaatttgtgac 106
              ||||||||||||||||||||
Sbjct: 134144 atatattgttaatttgtgac 134163
to top
>dbj|AP002353.4| Homo sapiens genomic DNA, chromosome 11 clone:CTD-2651C21, complete
             sequence
          Length = 202607

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 240   ttctctctactcacagctccttga 263
             |||||||| |||||||||||||||
Sbjct: 21605 ttctctcttctcacagctccttga 21582
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>emb|AL805906.7| Mouse DNA sequence from clone RP23-113J20 on chromosome 4, complete
             sequence
          Length = 176416

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 395   tttcctctttctcttcttag 414
             ||||||||||||||||||||
Sbjct: 46347 tttcctctttctcttcttag 46366
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>dbj|AB047036.1| Halocynthia roretzi HrZF-2 mRNA, partial cds
          Length = 2836

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 395 tttcctctttctcttcttag 414
           ||||||||||||||||||||
Sbjct: 101 tttcctctttctcttcttag 82


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,361,188
Number of Sequences: 3902068
Number of extensions: 6361188
Number of successful extensions: 129032
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128835
Number of HSP's gapped (non-prelim): 197
length of query: 577
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 554
effective length of database: 17,143,297,704
effective search space: 9497386928016
effective search space used: 9497386928016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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