| Clone Name | rbags22k13 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SYIC_CAEEL (Q21926) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6... | 30 | 5.9 |
|---|
>SYIC_CAEEL (Q21926) Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5)| (Isoleucine--tRNA ligase) (IleRS) Length = 1141 Score = 30.4 bits (67), Expect = 5.9 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -3 Query: 639 GHMMNLAQNALEVIITRGAYQNGHYSKR*QGW 544 GHM+ + ++ ++ R A+QNGHY +R GW Sbjct: 59 GHMLT---STIKDVVGRWAHQNGHYVERRFGW 87 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 103,686,691 Number of Sequences: 219361 Number of extensions: 2094452 Number of successful extensions: 5113 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 4937 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5112 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7592921998 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)