ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22j15 |
|---|---|
| Clone Library Name | barley_pub |
>PLDB1_ARATH (P93733) Phospholipase D beta 1 (EC 3.1.4.4) (AtPLDbeta1) (PLD beta| 1) (PLDbeta) Length = 967 Score = 72.8 bits (177), Expect = 5e-13 Identities = 33/41 (80%), Positives = 36/41 (87%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFTAIQENLTI 370 KYPV VDRKGKV+PLPG TFPD+GGNI G+F AIQENLTI Sbjct: 927 KYPVEVDRKGKVRPLPGSETFPDVGGNIVGTFIAIQENLTI 967
>PLDB2_ARATH (O23078) Phospholipase D beta 2 (EC 3.1.4.4) (AtPLDbeta2) (PLD beta| 2) (PLDdelta1) Length = 915 Score = 71.2 bits (173), Expect = 1e-12 Identities = 32/41 (78%), Positives = 35/41 (85%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFTAIQENLTI 370 KYPV VDRKGKV+PLPG FPD+GGN+ GSF AIQENLTI Sbjct: 875 KYPVEVDRKGKVRPLPGSEEFPDVGGNVVGSFLAIQENLTI 915
>PLDG1_ARATH (Q9T053) Phospholipase D gamma 1 (EC 3.1.4.4) (AtPLDgamma1) (PLD| gamma 1) (Choline phosphatase) (Lipophosphodiesterase II) (Lecithinase D) Length = 858 Score = 68.9 bits (167), Expect = 7e-12 Identities = 31/41 (75%), Positives = 33/41 (80%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFTAIQENLTI 370 KYPV VDR GKV LPGC TFPD+GG I GSF A+QENLTI Sbjct: 818 KYPVQVDRTGKVSSLPGCETFPDLGGKIIGSFLALQENLTI 858
>PLDG2_ARATH (Q9T051) Phospholipase D gamma 2 (EC 3.1.4.4) (AtPLDgamma2) (PLD| gamma 2) Length = 824 Score = 66.2 bits (160), Expect = 4e-11 Identities = 29/41 (70%), Positives = 32/41 (78%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFTAIQENLTI 370 KYPV VD+ GKV LPGC TFPD+GG I GSF +QENLTI Sbjct: 784 KYPVQVDKTGKVSSLPGCETFPDLGGKIIGSFLTLQENLTI 824
>PLDG3_ARATH (Q9T052) Phospholipase D gamma 3 (EC 3.1.4.4) (AtPLDgamma3) (PLD| gamma 3) Length = 866 Score = 62.4 bits (150), Expect = 6e-10 Identities = 28/41 (68%), Positives = 31/41 (75%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFTAIQENLTI 370 KYPV VDR GKV LPG TFPD+GG I GSF ++ENLTI Sbjct: 826 KYPVQVDRTGKVSSLPGYETFPDLGGKIIGSFLVVEENLTI 866
>PLDD1_ARATH (Q9C5Y0) Phospholipase D delta (EC 3.1.4.4) (AtPLDdelta) (PLD| delta) Length = 868 Score = 45.4 bits (106), Expect = 8e-05 Identities = 22/41 (53%), Positives = 28/41 (68%), Gaps = 1/41 (2%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGSFT-AIQENLT 373 KYP+ VD GKV PLP TFPD+GG I G+ + A+ + LT Sbjct: 827 KYPLQVDVDGKVSPLPDYETFPDVGGKIIGAHSMALPDTLT 867
>PLDA2_BRAOC (P55939) Phospholipase D alpha 2 precursor (EC 3.1.4.4) (PLD 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 812 Score = 35.0 bits (79), Expect = 0.11 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP+SVD +G + LPG FPD I G+ Sbjct: 771 RYPISVDNEGNITELPGFEFFPDSKARILGN 801
>PLDA2_ARATH (Q9SSQ9) Phospholipase D alpha 2 (EC 3.1.4.4) (AtPLDalpha2) (PLD| alpha 2) (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 810 Score = 33.5 bits (75), Expect = 0.32 Identities = 12/30 (40%), Positives = 17/30 (56%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICG 403 +YP+ + +G + LPGC FPD I G Sbjct: 769 RYPIGIASEGNITELPGCEFFPDTKARILG 798
>PLDA1_BRAOC (O82549) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 810 Score = 31.6 bits (70), Expect = 1.2 Identities = 14/31 (45%), Positives = 17/31 (54%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YPV VD +G V PG FPD I G+ Sbjct: 769 RYPVDVDGEGDVTEFPGFEFFPDTKARILGT 799
>PLDA1_PIMBR (O04883) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 30.8 bits (68), Expect = 2.1 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP++V +G V LPG FPD + G+ Sbjct: 767 RYPIAVASEGNVTELPGTEFFPDTKARVLGA 797
>PLDA1_VIGUN (O04865) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 809 Score = 30.8 bits (68), Expect = 2.1 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP+ V +G+V LPG FPD I G+ Sbjct: 768 RYPIGVASEGEVTELPGFEFFPDTKARILGA 798
>PLDA1_TOBAC (P93400) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 30.4 bits (67), Expect = 2.7 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP+ V +G V LPG FPD + G+ Sbjct: 767 RYPIGVASEGDVTELPGAEHFPDTKARVLGT 797
>PLDA2_ORYSA (P93844) Phospholipase D alpha 2 (EC 3.1.4.4) (PLD alpha 2)| (Choline phosphatase 2) (Phosphatidylcholine-hydrolyzing phospholipase D 2) Length = 818 Score = 30.4 bits (67), Expect = 2.7 Identities = 13/30 (43%), Positives = 17/30 (56%) Frame = -3 Query: 489 YPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 YPV V ++G V LPG FPD + G+ Sbjct: 779 YPVRVTKEGTVTELPGAKFFPDTQAPVIGT 808
>PLDA1_RICCO (Q41142) Phospholipase D alpha 1 precursor (EC 3.1.4.4) (PLD 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 808 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP+ V +G V LPG FPD + G+ Sbjct: 767 RYPIGVASEGDVTELPGTEFFPDTKARVLGA 797
>PLDA1_MAIZE (Q43270) Phospholipase D alpha 1 (EC 3.1.4.4) (PLD alpha 1)| (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) Length = 812 Score = 30.0 bits (66), Expect = 3.5 Identities = 12/30 (40%), Positives = 15/30 (50%) Frame = -3 Query: 489 YPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 YP+ V G V LPG FPD + G+ Sbjct: 772 YPIGVTADGSVTELPGMENFPDTRARVLGN 801
>PLDA1_ARATH (Q38882) Phospholipase D alpha 1 (EC 3.1.4.4) (AtPLDalpha1) (PLD| alpha 1) (Choline phosphatase 1) (Phosphatidylcholine-hydrolyzing phospholipase D 1) (PLDalpha) Length = 810 Score = 29.6 bits (65), Expect = 4.6 Identities = 12/31 (38%), Positives = 17/31 (54%) Frame = -3 Query: 492 KYPVSVDRKGKVKPLPGCATFPDMGGNICGS 400 +YP+ V +G + LPG FPD I G+ Sbjct: 769 RYPIGVASEGDITELPGFEFFPDTKARILGT 799
>NDST_DROME (Q9V3L1) Bifunctional heparan sulfate| N-deacetylase/N-sulfotransferase (EC 2.8.2.8) (Glucosaminyl N-deacetylase/N-sulfotransferase) (Sulfateless) [Includes: Heparan sulfate N-deacetylase (EC 3.-.-.-); Heparan sulfate N-sulfotransferase (EC 2.8 Length = 1048 Score = 29.6 bits (65), Expect = 4.6 Identities = 11/22 (50%), Positives = 13/22 (59%) Frame = -1 Query: 455 NPCQDVRHSQTWAGTSVAPSRP 390 NPC DVRH + W+ T S P Sbjct: 738 NPCDDVRHKKIWSKTKNCDSLP 759
>Y8K6_ENCCU (Q8SUI0) Hypothetical protein ECU08_2060| Length = 263 Score = 28.9 bits (63), Expect = 7.8 Identities = 14/52 (26%), Positives = 24/52 (46%) Frame = +3 Query: 159 VKMVTTKGRNDLNFFFLVSNLPYLPATYILACGILSLPMLSGIRQCYFGIFV 314 + ++ + ND + FF LP +P TY+L+ +P G IF+ Sbjct: 116 IALIINRRENDDDLFFFSVILPSMPLTYLLSTSCRLVPGQIGFIDTGINIFI 167 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 72,639,954 Number of Sequences: 219361 Number of extensions: 1426771 Number of successful extensions: 3370 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 3285 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3370 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3465624120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
