ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22j12
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chro... 44 0.57
2emb|AL139428.15| Human DNA sequence from clone RP5-977F20 on chr... 44 0.57
3gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome... 42 2.2
4gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosom... 42 2.2
5gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete se... 42 2.2
6emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chr... 42 2.2
7gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's ... 42 2.2
8gb|DQ074960.1| Lactobacillus reuteri unknown extracellular prote... 42 2.2
9gb|DQ074871.1| Lactobacillus reuteri lr1039 (lr1039) gene, compl... 42 2.2
10gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, comple... 42 2.2
11emb|AL359332.2|CNS05TES Human chromosome 14 DNA sequence BAC R-4... 42 2.2
12gb|AY104945.1| Zea mays PCO113923 mRNA sequence 42 2.2
13gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, c... 42 2.2
14gb|AY785370.1| Streptomyces cinnamonensis unknown gene, partial ... 40 8.9
15gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 8.9
16gb|AC101956.5| Mus musculus chromosome 5, clone RP24-166L23, com... 40 8.9
17gb|AC145991.2| Pan troglodytes BAC clone RP43-170F9 from 7, comp... 40 8.9
18gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.9
19gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, compl... 40 8.9
20gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome... 40 8.9
21gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosom... 40 8.9
22ref|XM_644397.1| Entamoeba histolytica HM-1:IMSS DNA repair heli... 40 8.9
23ref|XM_645740.1| Entamoeba histolytica HM-1:IMSS DNA repair heli... 40 8.9
24gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa... 40 8.9
25gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete ... 40 8.9
26emb|AL139259.15| Human DNA sequence from clone RP5-861H2 on chro... 40 8.9
27gb|AC163411.3| Mus musculus chromosome 3, clone RP24-242E11, com... 40 8.9
28emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on ch... 40 8.9
29emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 i... 40 8.9
30gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genom... 40 8.9
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
32dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
33gb|AC019090.9| Homo sapiens BAC clone RP11-375P12 from 2, comple... 40 8.9
34gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, com... 40 8.9
35emb|BX005008.12| Zebrafish DNA sequence from clone DKEY-29K15 in... 40 8.9
36emb|BX088703.5| Zebrafish DNA sequence from clone CH211-241D14 i... 40 8.9
37emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chro... 40 8.9
38emb|BX901977.10| Zebrafish DNA sequence from clone DKEY-1H1 in l... 40 8.9
39emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in li... 40 8.9
40emb|AL135961.4|CNS01DVM Human chromosome 14 DNA sequence BAC R-9... 40 8.9
41emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in l... 40 8.9
42gb|AC140259.3| Mus musculus BAC clone RP24-295G1 from 3, complet... 40 8.9
43gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
44emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chr... 40 8.9 
>emb|AL161454.10| Human DNA sequence from clone RP11-72B4 on chromosome 9 Contains the
             gene for a novel protein similar to putative repair and
             recombination helicase RAD26L (LOC56959), a parkinson
             disease 7 (PARK7) pseudogene, the 5' end of a novel gene
             and a CpG island, complete sequence
          Length = 144536

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 338   accaagatagaccaaatcatgg 359
             ||||||||||||||||||||||
Sbjct: 30808 accaagatagaccaaatcatgg 30829
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>emb|AL139428.15| Human DNA sequence from clone RP5-977F20 on chromosome 1, complete
            sequence
          Length = 43679

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 284  tgcagtatacataataacaaag 305
            ||||||||||||||||||||||
Sbjct: 5976 tgcagtatacataataacaaag 5997
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>gb|AC133517.6| Mus musculus BAC clone RP23-136I9 from chromosome 14, complete sequence
          Length = 196833

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 350    caaatcatggacatggacatgaata 374
              |||||| ||||||||||||||||||
Sbjct: 120905 caaatcttggacatggacatgaata 120881
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>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence
          Length = 159954

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 365    gacatgaatatcaaagagacaggaa 389
              |||||||| ||||||||||||||||
Sbjct: 147867 gacatgaaaatcaaagagacaggaa 147843
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>gb|AC145802.2| Xenopus tropicalis clone CH216-80C17, complete sequence
          Length = 163910

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 284    tgcagtatacataataacaaa 304
              |||||||||||||||||||||
Sbjct: 130815 tgcagtatacataataacaaa 130795
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>emb|AL390036.17| Human DNA sequence from clone RP11-356N1 on chromosome 1 Contains the
             3' end of a novel gene, a novel gene, the 3' end of the
             SLC25A24 gene for solute carrier family 25 (mitochondrial
             carrier; phosphate carrier) member 24 and two CpG islands,
             complete sequence
          Length = 183037

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 290   atacataataacaaagtttgt 310
             |||||||||||||||||||||
Sbjct: 18069 atacataataacaaagtttgt 18089
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>gb|AC105515.5| Rattus norvegicus 14 BAC CH230-13H11 (Children's Hospital Oakland
              Research Institute) complete sequence
          Length = 221805

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 258    tcgagtatgtgttgaaagctcagtg 282
              ||||||| |||||||||||||||||
Sbjct: 104105 tcgagtaagtgttgaaagctcagtg 104081
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>gb|DQ074960.1| Lactobacillus reuteri unknown extracellular protein lr0898 (lr0898)
            gene, partial cds
          Length = 2148

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  aataaaccatatgaatggttg 552
            |||||||||||||||||||||
Sbjct: 1735 aataaaccatatgaatggttg 1755
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>gb|DQ074871.1| Lactobacillus reuteri lr1039 (lr1039) gene, complete cds
          Length = 2622

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 532  aataaaccatatgaatggttg 552
            |||||||||||||||||||||
Sbjct: 1735 aataaaccatatgaatggttg 1755
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>gb|AC012001.6| Homo sapiens BAC clone RP11-465G21 from 2, complete sequence
          Length = 151336

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 313   aatgacagtgaaataaataga 333
             |||||||||||||||||||||
Sbjct: 40528 aatgacagtgaaataaataga 40548
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>emb|AL359332.2|CNS05TES Human chromosome 14 DNA sequence BAC R-403E10 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 164486

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 317   acagtgaaataaatagagcta 337
             |||||||||||||||||||||
Sbjct: 91105 acagtgaaataaatagagcta 91125
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>gb|AY104945.1| Zea mays PCO113923 mRNA sequence
          Length = 1032

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 348 accaaatcatggacatggacatgaa 372
           ||||||||||||||||| |||||||
Sbjct: 492 accaaatcatggacatgtacatgaa 516
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>gb|AC119921.12| Mus musculus chromosome 12, clone RP24-252B23, complete sequence
          Length = 162290

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 365  gacatgaatatcaaagagacaggaa 389
            |||||||| ||||||||||||||||
Sbjct: 7909 gacatgaaaatcaaagagacaggaa 7885
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>gb|AY785370.1| Streptomyces cinnamonensis unknown gene, partial cds; and putative
            leader peptide and acetohydroxy acid synthase large
            subunit (ilvB) genes, complete cds
          Length = 2688

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 422  cgaggacgcccaggtctggc 441
            ||||||||||||||||||||
Sbjct: 2558 cgaggacgcccaggtctggc 2577
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>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 65      gagaactaacaaaattatca 84
               ||||||||||||||||||||
Sbjct: 4321298 gagaactaacaaaattatca 4321317
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>gb|AC101956.5| Mus musculus chromosome 5, clone RP24-166L23, complete sequence
          Length = 183807

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    caaagtttgtgcaatgacag 320
              ||||||||||||||||||||
Sbjct: 132232 caaagtttgtgcaatgacag 132213
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>gb|AC145991.2| Pan troglodytes BAC clone RP43-170F9 from 7, complete sequence
          Length = 173879

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 273   aagctcagtgctgcagtatacataataacaaa 304
             ||||||| ||| ||||||| ||||||||||||
Sbjct: 93506 aagctcattgcagcagtattcataataacaaa 93537
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 290      atacataataacaaagtttg 309
                ||||||||||||||||||||
Sbjct: 29948192 atacataataacaaagtttg 29948173
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>gb|AC093477.6| Mus musculus chromosome 1, clone RP23-58B6, complete sequence
          Length = 225321

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 75    aaaattatcaatgcacaacaatat 98
             |||||||||||| |||||||||||
Sbjct: 30598 aaaattatcaattcacaacaatat 30621
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>gb|AC122511.5| Mus musculus BAC clone RP24-446A8 from chromosome 6, complete
            sequence
          Length = 157847

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 75   aaaattatcaatgcacaaca 94
            ||||||||||||||||||||
Sbjct: 1526 aaaattatcaatgcacaaca 1507
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>gb|AC132597.3| Mus musculus BAC clone RP24-180D17 from chromosome 5, complete sequence
          Length = 162871

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 301    caaagtttgtgcaatgacag 320
              ||||||||||||||||||||
Sbjct: 142261 caaagtttgtgcaatgacag 142280
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>ref|XM_644397.1| Entamoeba histolytica HM-1:IMSS DNA repair helicase (297.t00005)
           partial mRNA
          Length = 2367

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  gaactaacaaaattatcaat 86
           ||||||||||||||||||||
Sbjct: 301 gaactaacaaaattatcaat 320
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>ref|XM_645740.1| Entamoeba histolytica HM-1:IMSS DNA repair helicase (197.t00012)
           partial mRNA
          Length = 2313

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 67  gaactaacaaaattatcaat 86
           ||||||||||||||||||||
Sbjct: 304 gaactaacaaaattatcaat 323
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>gb|AY387483.1| Oryza sativa (japonica cultivar-group) BAC OSJNBa0084L17, complete
             sequence
          Length = 159661

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 290   atacataataacaaagtttg 309
             ||||||||||||||||||||
Sbjct: 62414 atacataataacaaagtttg 62433
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>gb|AC147179.15| Medicago truncatula clone mth2-142n19, complete sequence
          Length = 113361

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 581    acaactaaccaaatttaact 600
              ||||||||||||||||||||
Sbjct: 103868 acaactaaccaaatttaact 103849
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>emb|AL139259.15| Human DNA sequence from clone RP5-861H2 on chromosome 1q41 Contains
             part of a novel gene, complete sequence
          Length = 28489

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 476   acattctaccacataatcagatgg 499
             |||||||||||||||| |||||||
Sbjct: 17203 acattctaccacataaacagatgg 17180
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>gb|AC163411.3| Mus musculus chromosome 3, clone RP24-242E11, complete sequence
          Length = 144476

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 524   ccaaaccgaataaaccatatgaat 547
             |||||| |||||||||||||||||
Sbjct: 64283 ccaaactgaataaaccatatgaat 64260
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>emb|AL646051.19| Mouse DNA sequence from clone RP23-222M22 on chromosome 11 Contains the
             5' end of the Hs3st3a gene for heparan sulfate
             (glucosamine) 3-O-sulfotransferase 3A and a CpG island,
             complete sequence
          Length = 144847

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 567   atcataagcatctcacaact 586
             ||||||||||||||||||||
Sbjct: 38060 atcataagcatctcacaact 38041
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>emb|BX901976.22| Zebrafish DNA sequence from clone DKEY-101P20 in linkage group 22,
              complete sequence
          Length = 201928

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    tggacatggacatgaatatc 376
              ||||||||||||||||||||
Sbjct: 192832 tggacatggacatgaatatc 192851
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>gb|AC118133.4| Oryza sativa chromosome 3 BAC OSJNBb0016H12 genomic sequence, complete
              sequence
          Length = 139946

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 290    atacataataacaaagtttg 309
              ||||||||||||||||||||
Sbjct: 114133 atacataataacaaagtttg 114114
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 359     gacatggacatgaatatcaaagag 382
               |||||||| |||||||||||||||
Sbjct: 7538208 gacatggaaatgaatatcaaagag 7538231
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 290      atacataataacaaagtttg 309
                ||||||||||||||||||||
Sbjct: 30039614 atacataataacaaagtttg 30039595
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>gb|AC019090.9| Homo sapiens BAC clone RP11-375P12 from 2, complete sequence
          Length = 87224

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 290   atacataataacaaagtttg 309
             ||||||||||||||||||||
Sbjct: 53239 atacataataacaaagtttg 53220
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>gb|AC004147.2| Homo sapiens chromosome 17, clone CTC-304I17, complete sequence
          Length = 139076

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   agcaaacattcagggaggaa 149
             ||||||||||||||||||||
Sbjct: 66311 agcaaacattcagggaggaa 66330
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>emb|BX005008.12| Zebrafish DNA sequence from clone DKEY-29K15 in linkage group 14,
             complete sequence
          Length = 208014

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 78    attatcaatgcacaacaata 97
             ||||||||||||||||||||
Sbjct: 65466 attatcaatgcacaacaata 65485
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>emb|BX088703.5| Zebrafish DNA sequence from clone CH211-241D14 in linkage group 17,
             complete sequence
          Length = 87046

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 270   tgaaagctcagtgctgcagt 289
             ||||||||||||||||||||
Sbjct: 46940 tgaaagctcagtgctgcagt 46959
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>emb|AL671962.5| Mouse DNA sequence from clone RP23-163A2 on chromosome X, complete
              sequence
          Length = 199534

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     atacatacaacacgtaatat 36
              ||||||||||||||||||||
Sbjct: 184066 atacatacaacacgtaatat 184085
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>emb|BX901977.10| Zebrafish DNA sequence from clone DKEY-1H1 in linkage group 22,
             complete sequence
          Length = 86957

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   tggacatggacatgaatatc 376
             ||||||||||||||||||||
Sbjct: 19687 tggacatggacatgaatatc 19706
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>emb|BX000468.5| Zebrafish DNA sequence from clone DKEY-1J5 in linkage group 20,
             complete sequence
          Length = 208583

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 555   aatgaagccagaatcataag 574
             ||||||||||||||||||||
Sbjct: 53487 aatgaagccagaatcataag 53468
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>emb|AL135961.4|CNS01DVM Human chromosome 14 DNA sequence BAC R-910K8 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 202843

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 67    gaactaacaaaattatcaat 86
             ||||||||||||||||||||
Sbjct: 99829 gaactaacaaaattatcaat 99810
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>emb|BX000443.5| Zebrafish DNA sequence from clone DKEY-5K18 in linkage group 17, complete
              sequence
          Length = 193168

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 270    tgaaagctcagtgctgcagt 289
              ||||||||||||||||||||
Sbjct: 169317 tgaaagctcagtgctgcagt 169298
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>gb|AC140259.3| Mus musculus BAC clone RP24-295G1 from 3, complete sequence
          Length = 167743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 524   ccaaaccgaataaaccatatgaat 547
             |||||| |||||||||||||||||
Sbjct: 11428 ccaaactgaataaaccatatgaat 11451
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>gb|AC098835.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1732_H01,
             complete sequence
          Length = 85722

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 359   gacatggacatgaatatcaaagag 382
             |||||||| |||||||||||||||
Sbjct: 57808 gacatggaaatgaatatcaaagag 57831
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>emb|AL732480.12| Mouse DNA sequence from clone RP23-11N21 on chromosome 4, complete
             sequence
          Length = 209063

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 590   caaatttaactgataattcaaaat 613
             |||||||| |||||||||||||||
Sbjct: 63705 caaatttatctgataattcaaaat 63682


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,917,331
Number of Sequences: 3902068
Number of extensions: 5917331
Number of successful extensions: 111893
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 111647
Number of HSP's gapped (non-prelim): 246
length of query: 650
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 627
effective length of database: 17,143,297,704
effective search space: 10748847660408
effective search space used: 10748847660408
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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