| Clone Name | rbags22j09 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL583809.3|CNS07EFY Human chromosome 14 DNA sequence BAC R-736L22 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171699 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 atgacattagtacatagaaaat 72 |||||||||||||||||||||| Sbjct: 46869 atgacattagtacatagaaaat 46848
>emb|AL445383.5|CNS07ECZ Human chromosome 14 DNA sequence BAC R-88E18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172914 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 51 atgacattagtacatagaaaat 72 |||||||||||||||||||||| Sbjct: 148292 atgacattagtacatagaaaat 148271
>gb|AC116648.4| Homo sapiens BAC clone RP11-764M6 from 4, complete sequence Length = 130445 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 57 ttagtacatagaaaattggaccaat 81 |||||||||||| |||||||||||| Sbjct: 80775 ttagtacatagataattggaccaat 80799
>emb|BX279524.5| Zebrafish DNA sequence from clone DKEY-35H11 in linkage group 11, complete sequence Length = 157440 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 attacaatttacaatttnaatagc 32 ||||||||||||||||| |||||| Sbjct: 50847 attacaatttacaatttaaatagc 50870
>emb|BX530092.15| Mouse DNA sequence from clone RP23-45N17 on chromosome X, complete sequence Length = 136088 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 aattacaatttacaatttnaatag 31 |||||||||||||||||| ||||| Sbjct: 94923 aattacaatttacaatttaaatag 94946
>gb|AC105289.4| Homo sapiens BAC clone RP11-629A7 from 4, complete sequence Length = 87579 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 35 atctgaatgtccacagatgac 55 ||||||||||||||||||||| Sbjct: 28197 atctgaatgtccacagatgac 28217
>emb|BX255969.8| Zebrafish DNA sequence from clone DKEY-67M7 in linkage group 11, complete sequence Length = 155717 Score = 42.1 bits (21), Expect = 1.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 9 attacaatttacaatttnaatagc 32 ||||||||||||||||| |||||| Sbjct: 85115 attacaatttacaatttaaatagc 85138
>gb|AC150892.2| Mus musculus BAC clone RP24-383C4 from 5, complete sequence Length = 168742 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 2 tagtagaattacaatttacaa 22 ||||||||||||||||||||| Sbjct: 141250 tagtagaattacaatttacaa 141270
>gb|AC140221.3| Mus musculus BAC clone RP23-281K10 from 5, complete sequence Length = 184203 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 tagtagaattacaatttacaa 22 ||||||||||||||||||||| Sbjct: 154911 tagtagaattacaatttacaa 154891
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5, complete sequence Length = 197143 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 75 gaccaataaaactgcaaaaa 94 |||||||||||||||||||| Sbjct: 195166 gaccaataaaactgcaaaaa 195185
>emb|BX323847.8| Zebrafish DNA sequence from clone CH211-95G21 in linkage group 12, complete sequence Length = 154483 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 taaaactgcaaaaacgaaag 100 |||||||||||||||||||| Sbjct: 29651 taaaactgcaaaaacgaaag 29632
>emb|AL928656.4| Zebrafish DNA sequence from clone CH211-10G22, complete sequence Length = 153897 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 taaaactgcaaaaacgaaag 100 |||||||||||||||||||| Sbjct: 122030 taaaactgcaaaaacgaaag 122049
>emb|AL627405.17| Mouse DNA sequence from clone RP23-183D11 on chromosome 4, complete sequence Length = 193847 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 76 accaataaaactgcaaaaac 95 |||||||||||||||||||| Sbjct: 125463 accaataaaactgcaaaaac 125444 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,077,701 Number of Sequences: 3902068 Number of extensions: 1077701 Number of successful extensions: 20716 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 20702 Number of HSP's gapped (non-prelim): 14 length of query: 339 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 317 effective length of database: 17,147,199,772 effective search space: 5435662327724 effective search space used: 5435662327724 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)