ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22j07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
2dbj|AK061258.1| Oryza sativa (japonica cultivar-group) cDNA clon... 293 3e-76
3gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome... 157 4e-35
4dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 157 4e-35
5gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 157 4e-35
6emb|AJ005114.1|TBAJ5114 Trypanosoma brucei PEX11 gene, complete CDS 46 0.11
7gb|AC007820.5|AC007820 Drosophila melanogaster, chromosome 3R, r... 44 0.42
8gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, r... 44 0.42
9gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 11... 44 0.42
10ref|NM_201678.1| Arabidopsis thaliana protein binding / ubiquiti... 42 1.7
11ref|NM_201676.1| Arabidopsis thaliana protein binding / ubiquiti... 42 1.7
12ref|NM_201677.1| Arabidopsis thaliana protein binding / ubiquiti... 42 1.7
13ref|NM_179598.1| Arabidopsis thaliana protein binding / ubiquiti... 42 1.7
14ref|NM_126348.3| Arabidopsis thaliana protein binding / ubiquiti... 42 1.7
15ref|XM_614710.2| PREDICTED: Bos taurus similar to kinesin family... 42 1.7
16gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromo... 42 1.7
17gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence 42 1.7
18gb|AY091335.1| Arabidopsis thaliana unknown protein (At2g02960) ... 42 1.7
19gb|AY065284.1| Arabidopsis thaliana unknown protein (At2g02960) ... 42 1.7
20gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 ma... 42 1.7
21gb|AC161379.2| Mus musculus BAC clone RP23-207P12 from chromosom... 42 1.7
22emb|BX820794.1|CNS0A9IB Arabidopsis thaliana Full-length cDNA Co... 42 1.7
23emb|BX820739.1|CNS0A9LA Arabidopsis thaliana Full-length cDNA Co... 42 1.7
24emb|BX821079.1|CNS0A986 Arabidopsis thaliana Full-length cDNA Co... 42 1.7
25gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromoso... 42 1.7
26gb|AC156589.2| Glomus intraradices clone JGIAHZS-9E16, complete ... 42 1.7
27gb|AY103639.1| Zea mays PCO142382 mRNA sequence 42 1.7
28gb|AC122563.8| Mus musculus chromosome 1, clone RP24-208F6, comp... 40 6.5
29gb|AC153728.1| Mus musculus BAC RP23-83N17 (Roswell Park Cancer... 40 6.5
30ref|XM_466400.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
31ref|XM_465097.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.5
32gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, co... 40 6.5
33gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosom... 40 6.5
34gb|AC124343.3| Mus musculus BAC clone RP24-445C12 from chromosom... 40 6.5
35gb|AY450852.1| Caenorhabditis elegans Tousled-like kinase (tlk-1... 40 6.5
36gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome... 40 6.5
37gb|AC122805.4| Mus musculus BAC clone RP23-296O23 from 3, comple... 40 6.5
38gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, com... 40 6.5
39gb|BC057437.1| Danio rerio cDNA clone IMAGE:6797804, partial cds 40 6.5
40gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, com... 40 6.5
41emb|BX530021.7| Zebrafish DNA sequence from clone CH211-117G3 in... 40 6.5
42emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chr... 40 6.5
43gb|AC119744.3| Homo sapiens 3 BAC RP11-744O11 (Roswell Park Canc... 40 6.5
44gb|AE005975.1| Caulobacter crescentus CB15 section 301 of 359 of... 40 6.5
45ref|NM_164738.1| Drosophila melanogaster milton CG13777-RB, tran... 40 6.5
46ref|NM_164736.1| Drosophila melanogaster milton CG13777-RA, tran... 40 6.5
47gb|AY095025.1| Drosophila melanogaster LD08974 full insert cDNA 40 6.5
48ref|NM_080765.2| Drosophila melanogaster milton CG13777-RC, tran... 40 6.5
49gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complet... 40 6.5
50ref|XM_687287.1| PREDICTED: Danio rerio similar to MGC69008 prot... 40 6.5
51gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27... 40 6.5
52gb|AY051825.1| Drosophila melanogaster LD33316 full length cDNA 40 6.5
53ref|NM_181913.2| Caenorhabditis elegans Tousled-Like Kinase fami... 40 6.5
54ref|NM_066744.2| Caenorhabditis elegans Tousled-Like Kinase fami... 40 6.5
55dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
56gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, ... 40 6.5
57dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
58gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, com... 40 6.5
59gb|AC124916.3| Homo sapiens chromosome 3 clone RP11-1029M24, com... 40 6.5
60gb|AY038001.1| Drosophila melanogaster clone miltLD8 kinesin-ass... 40 6.5
61gb|AY038000.1| Drosophila melanogaster clone miltLD11 kinesin-as... 40 6.5
62dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
63dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
64dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.5
65emb|BX001014.6| Zebrafish DNA sequence from clone DKEY-11C5 in l... 40 6.5
66dbj|AK071239.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
67emb|BX548009.4| Zebrafish DNA sequence from clone CH211-237K17 i... 40 6.5
68dbj|AK062467.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.5
69gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25... 40 6.5
70gb|CP000191.1| Drosophila melanogaster genomic scaffold 21100002... 40 6.5
71gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complet... 40 6.5
72emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chr... 40 6.5
73emb|AL928564.8| Mouse DNA sequence from clone RP23-255J22 on chr... 40 6.5 
>dbj|AK071098.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081C09, full
            insert sequence
          Length = 1505

 Score =  293 bits (148), Expect = 3e-76
 Identities = 223/248 (89%)
 Strand = Plus / Minus

                                                                        
Query: 237  tgctgctggtgtggctcatgctgtggagtggttggggggtctggagcgatggtaaactga 296
            |||||||| ||||||||||||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 1102 tgctgctgctgtggctcatgctgtggagtggcgggggagtctggagcgatggtgaactga 1043

                                                                        
Query: 297  agggcacggccctgggctgattgcaggatgaatgccacctctgccgtggcaattgaggcc 356
            |||||| |||| |||||||||||||||||||||||||||||||| |  |||||||  |||
Sbjct: 1042 agggcatggccttgggctgattgcaggatgaatgccacctctgctgcagcaattgcagcc 983

                                                                        
Query: 357  gcttcctcattttgtcgccggcgatgcaaaatactgaagatccatgccattatatagcat 416
            |||||||   |||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 982  gcttcctgtctttgtcgccggcgatgcaaaatactgaatatccaagccatgatatagcat 923

                                                                        
Query: 417  ggcagcaggaatccagcggctcggagaagaaaaagagagaacatggtagaagcgtcatca 476
            |||||||| |||||||| ||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 922  ggcagcagaaatccagcagctcgaagtagaaagagcgagaacatggtagaagcatcatca 863

                    
Query: 477  tctccttc 484
            ||||||||
Sbjct: 862  tctccttc 855
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>dbj|AK061258.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-212-B06, full
            insert sequence
          Length = 1390

 Score =  293 bits (148), Expect = 3e-76
 Identities = 223/248 (89%)
 Strand = Plus / Minus

                                                                        
Query: 237  tgctgctggtgtggctcatgctgtggagtggttggggggtctggagcgatggtaaactga 296
            |||||||| ||||||||||||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 1000 tgctgctgctgtggctcatgctgtggagtggcgggggagtctggagcgatggtgaactga 941

                                                                        
Query: 297  agggcacggccctgggctgattgcaggatgaatgccacctctgccgtggcaattgaggcc 356
            |||||| |||| |||||||||||||||||||||||||||||||| |  |||||||  |||
Sbjct: 940  agggcatggccttgggctgattgcaggatgaatgccacctctgctgcagcaattgcagcc 881

                                                                        
Query: 357  gcttcctcattttgtcgccggcgatgcaaaatactgaagatccatgccattatatagcat 416
            |||||||   |||||||||||||||||||||||||||| ||||| ||||| |||||||||
Sbjct: 880  gcttcctgtctttgtcgccggcgatgcaaaatactgaatatccaagccatgatatagcat 821

                                                                        
Query: 417  ggcagcaggaatccagcggctcggagaagaaaaagagagaacatggtagaagcgtcatca 476
            |||||||| |||||||| ||||| || ||||| || ||||||||||||||||| ||||||
Sbjct: 820  ggcagcagaaatccagcagctcgaagtagaaagagcgagaacatggtagaagcatcatca 761

                    
Query: 477  tctccttc 484
            ||||||||
Sbjct: 760  tctccttc 753
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>gb|AC109365.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0034P08,
              complete sequence
          Length = 173088

 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Plus

                                                                          
Query: 237    tgctgctggtgtggctcatgctgtggagtggttggggggtctggagcgatggtaaactga 296
              |||||||| ||||||||||||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 123220 tgctgctgctgtggctcatgctgtggagtggcgggggagtctggagcgatggtgaactga 123279

                                                                          
Query: 297    agggcacggccctgggctgattgcaggatgaatgccacctctgccgtggcaattgaggcc 356
              |||||| |||| |||||||||||||||||||||||||||||||| |  |||||||  |||
Sbjct: 123280 agggcatggccttgggctgattgcaggatgaatgccacctctgctgcagcaattgcagcc 123339

                     
Query: 357    gcttcct 363
              |||||||
Sbjct: 123340 gcttcct 123346



 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Plus

                                                                          
Query: 367    tttgtcgccggcgatgcaaaatactgaagatccatgccattatatagcatggcagcagga 426
              |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |
Sbjct: 124615 tttgtcgccggcgatgcaaaatactgaatatccaagccatgatatagcatggcagcagaa 124674

                                    
Query: 427    atccagcggctcggagaagaaa 448
              ||||||| ||||| || |||||
Sbjct: 124675 atccagcagctcgaagtagaaa 124696



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                              
Query: 453    gagaacatggtagaagcgtcatcatctccttc 484
              ||||||||||||||||| ||||||||||||||
Sbjct: 124822 gagaacatggtagaagcatcatcatctccttc 124853
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                            
Query: 237      tgctgctggtgtggctcatgctgtggagtggttggggggtctggagcgatggtaaactga 296
                |||||||| ||||||||||||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 22218078 tgctgctgctgtggctcatgctgtggagtggcgggggagtctggagcgatggtgaactga 22218019

                                                                            
Query: 297      agggcacggccctgggctgattgcaggatgaatgccacctctgccgtggcaattgaggcc 356
                |||||| |||| |||||||||||||||||||||||||||||||| |  |||||||  |||
Sbjct: 22218018 agggcatggccttgggctgattgcaggatgaatgccacctctgctgcagcaattgcagcc 22217959

                       
Query: 357      gcttcct 363
                |||||||
Sbjct: 22217958 gcttcct 22217952



 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                            
Query: 367      tttgtcgccggcgatgcaaaatactgaagatccatgccattatatagcatggcagcagga 426
                |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |
Sbjct: 22216683 tttgtcgccggcgatgcaaaatactgaatatccaagccatgatatagcatggcagcagaa 22216624

                                      
Query: 427      atccagcggctcggagaagaaa 448
                ||||||| ||||| || |||||
Sbjct: 22216623 atccagcagctcgaagtagaaa 22216602



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 453      gagaacatggtagaagcgtcatcatctccttc 484
                ||||||||||||||||| ||||||||||||||
Sbjct: 22216476 gagaacatggtagaagcatcatcatctccttc 22216445
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  157 bits (79), Expect = 4e-35
 Identities = 115/127 (90%)
 Strand = Plus / Minus

                                                                            
Query: 237      tgctgctggtgtggctcatgctgtggagtggttggggggtctggagcgatggtaaactga 296
                |||||||| ||||||||||||||||||||||  |||| ||||||||||||||| ||||||
Sbjct: 22527989 tgctgctgctgtggctcatgctgtggagtggcgggggagtctggagcgatggtgaactga 22527930

                                                                            
Query: 297      agggcacggccctgggctgattgcaggatgaatgccacctctgccgtggcaattgaggcc 356
                |||||| |||| |||||||||||||||||||||||||||||||| |  |||||||  |||
Sbjct: 22527929 agggcatggccttgggctgattgcaggatgaatgccacctctgctgcagcaattgcagcc 22527870

                       
Query: 357      gcttcct 363
                |||||||
Sbjct: 22527869 gcttcct 22527863



 Score =  107 bits (54), Expect = 3e-20
 Identities = 75/82 (91%)
 Strand = Plus / Minus

                                                                            
Query: 367      tttgtcgccggcgatgcaaaatactgaagatccatgccattatatagcatggcagcagga 426
                |||||||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| |
Sbjct: 22526594 tttgtcgccggcgatgcaaaatactgaatatccaagccatgatatagcatggcagcagaa 22526535

                                      
Query: 427      atccagcggctcggagaagaaa 448
                ||||||| ||||| || |||||
Sbjct: 22526534 atccagcagctcgaagtagaaa 22526513



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Minus

                                                
Query: 453      gagaacatggtagaagcgtcatcatctccttc 484
                ||||||||||||||||| ||||||||||||||
Sbjct: 22526387 gagaacatggtagaagcatcatcatctccttc 22526356
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>emb|AJ005114.1|TBAJ5114 Trypanosoma brucei PEX11 gene, complete CDS
          Length = 3188

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 440 gagaagaaaaagagagaacatgg 462
           |||||||||||||||||||||||
Sbjct: 177 gagaagaaaaagagagaacatgg 199
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>gb|AC007820.5|AC007820 Drosophila melanogaster, chromosome 3R, region 99F-99F, BAC clone
             BACR12J15, complete sequence
          Length = 198734

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 230   ttgctgttgctgctggtgtggc 251
             ||||||||||||||||||||||
Sbjct: 40683 ttgctgttgctgctggtgtggc 40662
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>gb|AC008299.5|AC008299 Drosophila melanogaster, chromosome 3R, region 99F4-99F11, BAC clone
              BACR48G16, complete sequence
          Length = 173844

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 230    ttgctgttgctgctggtgtggc 251
              ||||||||||||||||||||||
Sbjct: 132752 ttgctgttgctgctggtgtggc 132731
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>gb|AE003774.3| Drosophila melanogaster chromosome 3R, section 112 of 118 of the complete
              sequence
          Length = 239051

 Score = 44.1 bits (22), Expect = 0.42
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 230    ttgctgttgctgctggtgtggc 251
              ||||||||||||||||||||||
Sbjct: 130335 ttgctgttgctgctggtgtggc 130314
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>ref|NM_201678.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT2G02960 transcript variant AT2G02960.5
            mRNA, complete cds
          Length = 1560

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 402  gccattatatagcatggcagcaggaatccagcggctcggag 442
            ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 1111 gccatgatatagcatggaagaagaaatccagcagctcggag 1071
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>ref|NM_201676.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/ zinc
            ion binding AT2G02960 transcript variant AT2G02960.3
            mRNA, complete cds
          Length = 1459

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 402  gccattatatagcatggcagcaggaatccagcggctcggag 442
            ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 1010 gccatgatatagcatggaagaagaaatccagcagctcggag 970
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>ref|NM_201677.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT2G02960 transcript variant
           AT2G02960.4 mRNA, complete cds
          Length = 1258

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 809 gccatgatatagcatggaagaagaaatccagcagctcggag 769
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>ref|NM_179598.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT2G02960 transcript variant
           AT2G02960.2 mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 796 gccatgatatagcatggaagaagaaatccagcagctcggag 756
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>ref|NM_126348.3| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT2G02960 transcript variant
           AT2G02960.1 mRNA, complete cds
          Length = 1249

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 800 gccatgatatagcatggaagaagaaatccagcagctcggag 760
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>ref|XM_614710.2| PREDICTED: Bos taurus similar to kinesin family member 15
            (LOC541135), mRNA
          Length = 4713

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 441  agaagaaaaagagagaacatg 461
            |||||||||||||||||||||
Sbjct: 3954 agaagaaaaagagagaacatg 3974
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>gb|AC161886.4| Pan troglodytes BAC clone CH251-708N9 from chromosome 7, complete
              sequence
          Length = 205419

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 5      taaatttacattaaataatgcttaa 29
              |||| ||||||||||||||||||||
Sbjct: 125126 taaacttacattaaataatgcttaa 125150
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>gb|AC157320.2| Zea mays clone ZMMBBb-7C14, complete sequence
          Length = 132140

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 313   ctgattgcaggatgaatgccacctc 337
             |||| ||||||||||||||||||||
Sbjct: 21475 ctgactgcaggatgaatgccacctc 21451
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>gb|AY091335.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds
          Length = 847

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 626 gccatgatatagcatggaagaagaaatccagcagctcggag 586
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>gb|AY065284.1| Arabidopsis thaliana unknown protein (At2g02960) mRNA, complete cds
          Length = 1245

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 794 gccatgatatagcatggaagaagaaatccagcagctcggag 754
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>gb|AC004138.3| Arabidopsis thaliana chromosome 2 clone T17M13 map CIC11A04, complete
             sequence
          Length = 104016

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 402   gccattatatagcatggcagcaggaatccagcggctcggag 442
             ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 42889 gccatgatatagcatggaagaagaaatccagcagctcggag 42929
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>gb|AC161379.2| Mus musculus BAC clone RP23-207P12 from chromosome 17, complete
             sequence
          Length = 189293

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 444   agaaaaagagagaacatggta 464
             |||||||||||||||||||||
Sbjct: 36139 agaaaaagagagaacatggta 36119
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>emb|BX820794.1|CNS0A9IB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH6ZB08 of Hormone Treated Callus of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1525

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 402  gccattatatagcatggcagcaggaatccagcggctcggag 442
            ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 1111 gccatgatatagcatggaagaagaaatccagcagctcggag 1071
to top
>emb|BX820739.1|CNS0A9LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH65ZC01 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1364

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 402  gccattatatagcatggcagcaggaatccagcggctcggag 442
            ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 1010 gccatgatatagcatggaagaagaaatccagcagctcggag 970
to top
>emb|BX821079.1|CNS0A986 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL12ZE04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1216

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 402 gccattatatagcatggcagcaggaatccagcggctcggag 442
           ||||| ||||||||||| || || |||||||| ||||||||
Sbjct: 809 gccatgatatagcatggaagaagaaatccagcagctcggag 769
to top
>gb|AC146074.4| Pan troglodytes BAC clone RP43-15D8 from chromosome 7, complete sequence
          Length = 196799

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 5      taaatttacattaaataatgcttaa 29
              |||| ||||||||||||||||||||
Sbjct: 118263 taaacttacattaaataatgcttaa 118287
to top
>gb|AC156589.2| Glomus intraradices clone JGIAHZS-9E16, complete sequence
          Length = 38890

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     tattaaatttacattaaataa 22
             |||||||||||||||||||||
Sbjct: 38621 tattaaatttacattaaataa 38601
to top
>gb|AY103639.1| Zea mays PCO142382 mRNA sequence
          Length = 1209

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 402 gccattatatagcatggcagcaggaatccagcggctc 438
           ||||| ||||||||||||||||  |||||||| ||||
Sbjct: 768 gccataatatagcatggcagcaaaaatccagccgctc 732
to top
>gb|AC122563.8| Mus musculus chromosome 1, clone RP24-208F6, complete sequence
          Length = 180825

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 120   ttcctagcattcctgatgag 139
             ||||||||||||||||||||
Sbjct: 91459 ttcctagcattcctgatgag 91478
to top
>gb|AC153728.1| Mus musculus  BAC RP23-83N17 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 226417

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 228    tattgctgttgctgctggtg 247
              ||||||||||||||||||||
Sbjct: 142433 tattgctgttgctgctggtg 142414
to top
>ref|XM_466400.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1303

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 402 gccattatatagcatggcagcaggaatccagc 433
           ||||| ||||||||||||||||  ||||||||
Sbjct: 690 gccatgatatagcatggcagcaaaaatccagc 659
to top
>ref|XM_465097.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2049

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 229 attgctgttgctgctggtgt 248
           ||||||||||||||||||||
Sbjct: 964 attgctgttgctgctggtgt 983
to top
>gb|AC120004.14| Mus musculus chromosome 5, clone RP24-150N15, complete sequence
          Length = 199229

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ttgctgttgctgctggtgtg 249
             ||||||||||||||||||||
Sbjct: 17708 ttgctgttgctgctggtgtg 17727
to top
>gb|AC147377.4| Mus musculus BAC clone RP23-156K23 from chromosome 5, complete sequence
          Length = 236084

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 230   ttgctgttgctgctggtgtg 249
             ||||||||||||||||||||
Sbjct: 72987 ttgctgttgctgctggtgtg 72968
to top
>gb|AC124343.3| Mus musculus BAC clone RP24-445C12 from chromosome 3, complete sequence
          Length = 139786

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 18    aataatgcttaaattacattcaga 41
             ||||||||| ||||||||||||||
Sbjct: 15768 aataatgctgaaattacattcaga 15791
to top
>gb|AY450852.1| Caenorhabditis elegans Tousled-like kinase (tlk-1) mRNA, tlk-1-N2
           allele, complete cds
          Length = 2883

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 tattgctgttgctgctggtg 247
           ||||||||||||||||||||
Sbjct: 566 tattgctgttgctgctggtg 547
to top
>gb|AC122466.2| Mus musculus BAC clone RP24-304N8 from chromosome 5, complete sequence
          Length = 196687

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 230   ttgctgttgctgctggtgtg 249
             ||||||||||||||||||||
Sbjct: 13387 ttgctgttgctgctggtgtg 13406
to top
>gb|AC122805.4| Mus musculus BAC clone RP23-296O23 from 3, complete sequence
          Length = 202733

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 18     aataatgcttaaattacattcaga 41
              ||||||||| ||||||||||||||
Sbjct: 134487 aataatgctgaaattacattcaga 134510
to top
>gb|AC117581.8| Mus musculus chromosome 3, clone RP23-105M18, complete sequence
          Length = 215747

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 228   tattgctgttgctgctggtg 247
             ||||||||||||||||||||
Sbjct: 13464 tattgctgttgctgctggtg 13483
to top
>gb|BC057437.1| Danio rerio cDNA clone IMAGE:6797804, partial cds
          Length = 4472

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 439  ggagaagaaaaagagagaac 458
            ||||||||||||||||||||
Sbjct: 3426 ggagaagaaaaagagagaac 3445
to top
>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tattgctgttgctgctggtg 247
             ||||||||||||||||||||
Sbjct: 93360 tattgctgttgctgctggtg 93341
to top
>emb|BX530021.7| Zebrafish DNA sequence from clone CH211-117G3 in linkage group 6,
              complete sequence
          Length = 168208

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 9      tttacattaaataatgctta 28
              ||||||||||||||||||||
Sbjct: 107177 tttacattaaataatgctta 107158
to top
>emb|AL845496.5| Mouse DNA sequence from clone RP23-245J21 on chromosome 4 Contains
            part of the Ptprd gene for receptor type protein tyrosine
            phosphatase D, complete sequence
          Length = 187964

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 2    tattaaatttacattaaata 21
            ||||||||||||||||||||
Sbjct: 8633 tattaaatttacattaaata 8652
to top
>gb|AC119744.3| Homo sapiens 3 BAC RP11-744O11 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 100400

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     atattaaatttacattaaat 20
             ||||||||||||||||||||
Sbjct: 57153 atattaaatttacattaaat 57134
to top
>gb|AE005975.1| Caulobacter crescentus CB15 section 301 of 359 of the complete genome
          Length = 12017

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 237  tgctgctggtgtggctcatgctgt 260
            |||||||||| |||||||||||||
Sbjct: 1221 tgctgctggtctggctcatgctgt 1198
to top
>ref|NM_164738.1| Drosophila melanogaster milton CG13777-RB, transcript variant B
            (milt), mRNA
          Length = 4022

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3158 tgctgttgctgctggtgtgg 3139
to top
>ref|NM_164736.1| Drosophila melanogaster milton CG13777-RA, transcript variant A
            (milt), mRNA
          Length = 4063

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3199 tgctgttgctgctggtgtgg 3180
to top
>gb|AY095025.1| Drosophila melanogaster LD08974 full insert cDNA
          Length = 3097

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 1057 tgctgttgctgctggtgtgg 1038
to top
>ref|NM_080765.2| Drosophila melanogaster milton CG13777-RC, transcript variant C
            (milt), mRNA
          Length = 5220

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3199 tgctgttgctgctggtgtgg 3180
to top
>gb|AC034154.6| Homo sapiens BAC clone RP11-242D9 from 4, complete sequence
          Length = 210563

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 225   aactattgctgttgctgctg 244
             ||||||||||||||||||||
Sbjct: 21332 aactattgctgttgctgctg 21313
to top
>ref|XM_687287.1| PREDICTED: Danio rerio similar to MGC69008 protein (LOC563928), mRNA
          Length = 4349

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 439  ggagaagaaaaagagagaac 458
            ||||||||||||||||||||
Sbjct: 3420 ggagaagaaaaagagagaac 3439
to top
>gb|AC008326.9| Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
              BACR39J17, complete sequence
          Length = 148780

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgctgttgctgctggtgtgg 250
              ||||||||||||||||||||
Sbjct: 104150 tgctgttgctgctggtgtgg 104131
to top
>gb|AY051825.1| Drosophila melanogaster LD33316 full length cDNA
          Length = 4034

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3158 tgctgttgctgctggtgtgg 3139
to top
>ref|NM_181913.2| Caenorhabditis elegans Tousled-Like Kinase family member (tlk-1)
           (tlk-1) mRNA, complete cds
          Length = 3295

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 tattgctgttgctgctggtg 247
           ||||||||||||||||||||
Sbjct: 566 tattgctgttgctgctggtg 547
to top
>ref|NM_066744.2| Caenorhabditis elegans Tousled-Like Kinase family member (tlk-1)
           (tlk-1) mRNA, complete cds
          Length = 3894

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 tattgctgttgctgctggtg 247
           ||||||||||||||||||||
Sbjct: 679 tattgctgttgctgctggtg 660
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                                
Query: 402      gccattatatagcatggcagcaggaatccagc 433
                |||||||||||| |||| ||||| ||||||||
Sbjct: 14621114 gccattatatagaatggtagcagaaatccagc 14621083
to top
>gb|AC007977.12|AC007977 Drosophila melanogaster, chromosome 2L, region 27C-27C, BAC clone
              BACR13J07, complete sequence
          Length = 174287

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    tgctgttgctgctggtgtgg 250
              ||||||||||||||||||||
Sbjct: 160852 tgctgttgctgctggtgtgg 160833
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 402      gccattatatagcatggcagcaggaatccagc 433
                ||||| ||||||||||||||||  ||||||||
Sbjct: 22183917 gccatgatatagcatggcagcaaaaatccagc 22183948



 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 229      attgctgttgctgctggtgt 248
                ||||||||||||||||||||
Sbjct: 11471222 attgctgttgctgctggtgt 11471241
to top
>gb|AC126599.10| Mus musculus chromosome 3, clone RP24-487F9, complete sequence
          Length = 186281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tattgctgttgctgctggtg 247
             ||||||||||||||||||||
Sbjct: 76417 tattgctgttgctgctggtg 76398
to top
>gb|AC124916.3| Homo sapiens chromosome 3 clone RP11-1029M24, complete sequence
          Length = 207596

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 446   aaaaagagagaacatggtag 465
             ||||||||||||||||||||
Sbjct: 37063 aaaaagagagaacatggtag 37044
to top
>gb|AY038001.1| Drosophila melanogaster clone miltLD8 kinesin-associated
            mitochondrial adaptor protein (milton) mRNA, complete cds
          Length = 4281

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3199 tgctgttgctgctggtgtgg 3180
to top
>gb|AY038000.1| Drosophila melanogaster clone miltLD11 kinesin-associated
            mitochondrial adaptor protein (milton) mRNA, complete cds
          Length = 5242

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgctgttgctgctggtgtgg 250
            ||||||||||||||||||||
Sbjct: 3199 tgctgttgctgctggtgtgg 3180
to top
>dbj|AP005534.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0030M21
          Length = 155970

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 229   attgctgttgctgctggtgt 248
             ||||||||||||||||||||
Sbjct: 53714 attgctgttgctgctggtgt 53733
to top
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1342F01
          Length = 153287

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 402   gccattatatagcatggcagcaggaatccagc 433
             ||||| ||||||||||||||||  ||||||||
Sbjct: 79761 gccatgatatagcatggcagcaaaaatccagc 79792
to top
>dbj|AP005397.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0643D11
          Length = 137525

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 402   gccattatatagcatggcagcaggaatccagc 433
             |||||||||||| |||| ||||| ||||||||
Sbjct: 42781 gccattatatagaatggtagcagaaatccagc 42750
to top
>emb|BX001014.6| Zebrafish DNA sequence from clone DKEY-11C5 in linkage group 12, complete
              sequence
          Length = 193523

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 439    ggagaagaaaaagagagaac 458
              ||||||||||||||||||||
Sbjct: 135041 ggagaagaaaaagagagaac 135060
to top
>dbj|AK071239.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023083D22, full
           insert sequence
          Length = 1304

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 402 gccattatatagcatggcagcaggaatccagc 433
           ||||| ||||||||||||||||  ||||||||
Sbjct: 691 gccatgatatagcatggcagcaaaaatccagc 660
to top
>emb|BX548009.4| Zebrafish DNA sequence from clone CH211-237K17 in linkage group 3,
             complete sequence
          Length = 128639

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 241   gctggtgtggctcatgctgt 260
             ||||||||||||||||||||
Sbjct: 96619 gctggtgtggctcatgctgt 96600
to top
>dbj|AK062467.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-103-E03, full
           insert sequence
          Length = 622

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 402 gccattatatagcatggcagcaggaatccagc 433
           |||||||||||| |||| ||||| ||||||||
Sbjct: 77  gccattatatagaatggtagcagaaatccagc 46
to top
>gb|AE003616.2| Drosophila melanogaster chromosome 2L, section 25 of 83 of the complete
             sequence
          Length = 267997

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   tgctgttgctgctggtgtgg 250
             ||||||||||||||||||||
Sbjct: 26655 tgctgttgctgctggtgtgg 26636
to top
>gb|CP000191.1| Drosophila melanogaster genomic scaffold 211000022280172
          Length = 132906

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 229    attgctgttgctgctggtgt 248
              ||||||||||||||||||||
Sbjct: 117553 attgctgttgctgctggtgt 117534
to top
>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 228    tattgctgttgctgctggtg 247
              ||||||||||||||||||||
Sbjct: 144446 tattgctgttgctgctggtg 144465
to top
>emb|AL837510.5| Mouse DNA sequence from clone RP23-200B23 on chromosome 4, complete
             sequence
          Length = 199537

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   tattgctgttgctgctggtg 247
             ||||||||||||||||||||
Sbjct: 12604 tattgctgttgctgctggtg 12585
to top
>emb|AL928564.8| Mouse DNA sequence from clone RP23-255J22 on chromosome 2, complete
              sequence
          Length = 223337

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 434    ggctcggagaagaaaaagagagaa 457
              |||| |||||||||||||||||||
Sbjct: 152235 ggcttggagaagaaaaagagagaa 152258


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,630,497
Number of Sequences: 3902068
Number of extensions: 5630497
Number of successful extensions: 145548
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145212
Number of HSP's gapped (non-prelim): 336
length of query: 484
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 462
effective length of database: 17,147,199,772
effective search space: 7922006294664
effective search space used: 7922006294664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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