>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 435     ttactcaagctttggtgctttgaggagat 463
               ||||| |||||||||||||||||||||||
Sbjct: 3367963 ttactgaagctttggtgctttgaggagat 3367935

>dbj|AK068475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013152H07, full
            insert sequence
          Length = 4125

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 435  ttactcaagctttggtgctttgaggagat 463
            ||||| |||||||||||||||||||||||
Sbjct: 3825 ttactgaagctttggtgctttgaggagat 3797

>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                            
Query: 435     ttactcaagctttggtgctttgaggagat 463
               ||||| |||||||||||||||||||||||
Sbjct: 3367908 ttactgaagctttggtgctttgaggagat 3367880

>emb|AL844874.1|CNS08CAX Oryza sativa chromosome 12, . BAC OSJNBa0041K23 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 137936

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 435   ttactcaagctttggtgctttgaggagat 463
             ||||| |||||||||||||||||||||||
Sbjct: 47016 ttactgaagctttggtgctttgaggagat 46988

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 292      catgatatcattaccactttat 313
                ||||||||||||||||||||||
Sbjct: 16841500 catgatatcattaccactttat 16841521

>dbj|AP005817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1118_F01
          Length = 119248

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 292   catgatatcattaccactttat 313
             ||||||||||||||||||||||
Sbjct: 54865 catgatatcattaccactttat 54886

>emb|AL157836.11| Human DNA sequence from clone RP11-477D14 on chromosome 10, complete
             sequence
          Length = 175382

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 182   ttgaaatgaccaggaaacaga 202
             |||||||||||||||||||||
Sbjct: 11784 ttgaaatgaccaggaaacaga 11764

>emb|AL035468.3|HS424E5 Human DNA sequence from clone RP3-424E5 on chromosome 6q13-14.3,
             complete sequence
          Length = 93805

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 285   acaaccacatgatatcattac 305
             |||||||||||||||||||||
Sbjct: 55914 acaaccacatgatatcattac 55934

>ref|NM_001030738.1| Gallus gallus interleukin-1 receptor-associated kinase 4 (IRAK4),
            mRNA
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  acattgctttgctgaagata 333
            ||||||||||||||||||||
Sbjct: 2025 acattgctttgctgaagata 2006

>gb|AC150532.2| Bos taurus  BAC CH240-105A12 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 186851

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 125    caattttgattccatcttgt 144
              ||||||||||||||||||||
Sbjct: 176981 caattttgattccatcttgt 177000

>gb|AC149716.2| Bos taurus  BAC CH240-31B10 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 171707

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 125    caattttgattccatcttgt 144
              ||||||||||||||||||||
Sbjct: 104441 caattttgattccatcttgt 104422

>ref|NM_183426.1| Mus musculus strawberry notch homolog (Drosophila) (Stno), mRNA
          Length = 4679

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 831 ccacacggtctgggtgttgctttc 808

>gb|AC159999.6| Mus musculus BAC clone RP23-6P9 from chromosome 10, complete sequence
          Length = 216489

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 343   ccactcggtctgggtgttgctttc 366
             |||| |||||||||||||||||||
Sbjct: 69412 ccacacggtctgggtgttgctttc 69435

>gb|BC064113.1| Mus musculus strawberry notch homolog (Drosophila), mRNA (cDNA
           clone IMAGE:3376209), complete cds
          Length = 2175

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 588 ccacacggtctgggtgttgctttc 565

>gb|BC056369.1| Mus musculus strawberry notch homolog (Drosophila), mRNA (cDNA
           clone MGC:73429 IMAGE:6831600), complete cds
          Length = 4679

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 831 ccacacggtctgggtgttgctttc 808

>emb|AJ720408.1| Gallus gallus mRNA for hypothetical protein, clone 17b10
          Length = 2620

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 314  acattgctttgctgaagata 333
            ||||||||||||||||||||
Sbjct: 2025 acattgctttgctgaagata 2006

>ref|NM_001039972.1| Danio rerio solute carrier family 6 (neurotransmitter transporter,
           serotonin), member 4A (slc6a4a), mRNA
          Length = 2168

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 444 ctttggtgctttgaggagatgtac 467
           |||||| |||||||||||||||||
Sbjct: 274 ctttggggctttgaggagatgtac 251

>gb|DQ285098.1| Danio rerio serotonin transporter a mRNA, complete cds
          Length = 2168

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 444 ctttggtgctttgaggagatgtac 467
           |||||| |||||||||||||||||
Sbjct: 274 ctttggggctttgaggagatgtac 251

>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   gagtcaaaaattggatagag 252
             ||||||||||||||||||||
Sbjct: 25025 gagtcaaaaattggatagag 25044

>dbj|AK149806.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
           enriched library, clone:G530019J08 product:Putative
           strawberry notch protein homolog [Mus musculus], full
           insert sequence
          Length = 3904

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 855 ccacacggtctgggtgttgctttc 832

>gb|AC023136.6| Homo sapiens BAC clone RP11-497K21 from 4, complete sequence
          Length = 185593

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 285  acaaccacatgatatcatta 304
            ||||||||||||||||||||
Sbjct: 5129 acaaccacatgatatcatta 5110

>dbj|AK155674.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730119H15
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4350

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 828 ccacacggtctgggtgttgctttc 805

>dbj|AK155462.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630230G07
           product:hypothetical Proline-rich region profile
           containing protein, full insert sequence
          Length = 4351

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 829 ccacacggtctgggtgttgctttc 806

>ref|XM_692577.1| PREDICTED: Danio rerio similar to Sodium-dependent serotonin
           transporter (5HT transporter) (5HTT) (LOC569208), mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 444 ctttggtgctttgaggagatgtac 467
           |||||| |||||||||||||||||
Sbjct: 184 ctttggggctttgaggagatgtac 161

>dbj|AK170733.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F630116P09
           product:hypothetical protein, full insert sequence
          Length = 2133

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 623 ccacacggtctgggtgttgctttc 600

>dbj|AK089496.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN
           full-length enriched library, clone:F730040C21
           product:weakly similar to CDNA FLJ10833 FIS, CLONE
           NT2RP4001206, MODERATELY SIMILAR TO DROSOPHILA
           MELANOGASTER STRAWBERRY NOTCH MRNA (FRAGMENT) [Homo
           sapiens], full insert sequence
          Length = 2466

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 750 ccacacggtctgggtgttgctttc 727

>gb|AY075363.1| Drosophila melanogaster GM08326 full insert cDNA
          Length = 1999

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 17  aagacaaatgaaataggtca 36
           ||||||||||||||||||||
Sbjct: 822 aagacaaatgaaataggtca 841

>emb|AJ512611.1|MMU512611 Mus musculus mRNA for putative strawberry notch protein (Sno gene)
          Length = 4807

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 343 ccactcggtctgggtgttgctttc 366
           |||| |||||||||||||||||||
Sbjct: 987 ccacacggtctgggtgttgctttc 964

>emb|BX088540.6| Zebrafish DNA sequence from clone CH211-225B7 in linkage group 15,
             complete sequence
          Length = 176569

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 444   ctttggtgctttgaggagatgtac 467
             |||||| |||||||||||||||||
Sbjct: 76161 ctttggggctttgaggagatgtac 76184

>dbj|AP006668.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT16B20, TM0367,
             complete sequence
          Length = 112717

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 418   actccttcacgcacagctta 437
             ||||||||||||||||||||
Sbjct: 31665 actccttcacgcacagctta 31646

>dbj|AP004550.2| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-60D22, complete
             sequence
          Length = 118465

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 10    attttacaagacaaatgaaa 29
             ||||||||||||||||||||
Sbjct: 80063 attttacaagacaaatgaaa 80082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,791,471
Number of Sequences: 3902068
Number of extensions: 4791471
Number of successful extensions: 86430
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 86305
Number of HSP's gapped (non-prelim): 125
length of query: 472
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 450
effective length of database: 17,147,199,772
effective search space: 7716239897400
effective search space used: 7716239897400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)