ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22i24 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_468465.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2914 Score = 131 bits (66), Expect = 3e-27 Identities = 147/174 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 2512 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 2453 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaa 565 | |||||||| |||||||| ||||| || ||||||||||| |||||||| | ||||||| Sbjct: 2452 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgtataatagagaa 2393 Query: 566 tcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtcccat 619 || ||||| | ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 2392 tcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatcccat 2339
>ref|XM_507063.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1136_C04.8 mRNA Length = 2935 Score = 131 bits (66), Expect = 3e-27 Identities = 147/174 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 2513 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 2454 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaa 565 | |||||||| |||||||| ||||| || ||||||||||| |||||||| | ||||||| Sbjct: 2453 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgtataatagagaa 2394 Query: 566 tcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtcccat 619 || ||||| | ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 2393 tcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatcccat 2340
>dbj|AK099915.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116F10, full insert sequence Length = 2913 Score = 131 bits (66), Expect = 3e-27 Identities = 147/174 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 2511 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 2452 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaa 565 | |||||||| |||||||| ||||| || ||||||||||| |||||||| | ||||||| Sbjct: 2451 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgtataatagagaa 2392 Query: 566 tcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtcccat 619 || ||||| | ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 2391 tcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatcccat 2338
>dbj|AK069544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022A15, full insert sequence Length = 2935 Score = 131 bits (66), Expect = 3e-27 Identities = 147/174 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 2513 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 2454 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaa 565 | |||||||| |||||||| ||||| || ||||||||||| |||||||| | ||||||| Sbjct: 2453 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgtataatagagaa 2394 Query: 566 tcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtcccat 619 || ||||| | ||||||||||| ||||||||||| |||||||| || |||||| Sbjct: 2393 tcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatcccat 2340
>dbj|AK104995.2| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C12, full insert sequence Length = 1497 Score = 123 bits (62), Expect = 8e-25 Identities = 146/174 (83%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 1241 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 1182 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaa 565 | |||||||| |||||||| ||||| || ||||||||||| |||||||| | ||||||| Sbjct: 1181 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgtataatagagaa 1122 Query: 566 tcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtcccat 619 || ||||| | ||||||||||| |||| |||||| |||||||| || |||||| Sbjct: 1121 tcaatttgcgcatcgcagcatacgcagcgggttcccttcctcacttgatcccat 1068
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 35386970 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 35386911 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgt 554 | |||||||| |||||||| ||||| || ||||||||||| ||||||| Sbjct: 35386910 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgt 35386862 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 559 tagagaatcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtccca 618 ||||||||| ||||| | ||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 35386758 tagagaatcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatccca 35386699 Query: 619 t 619 | Sbjct: 35386698 t 35386698 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgcgc 201 |||||||||||||||||||||| Sbjct: 29456771 cacgacgcacgcacgcacgcgc 29456792
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 81.8 bits (41), Expect = 3e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 446 tatgcccggaccacctccacaatcggcgcccggcacagcgggcacttgccgccgctgcgc 505 |||||||| ||||||||| | |||||||| ||||| || ||||| ||||| || ||||| Sbjct: 47518 tatgcccgaaccacctccgcgatcggcgctcggcatagtgggcatttgccaccactgcga 47459 Query: 506 accagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgt 554 | |||||||| |||||||| ||||| || ||||||||||| ||||||| Sbjct: 47458 attagctcgtttgcacattttgagcaagtacacatgtgcccgcatctgt 47410 Score = 58.0 bits (29), Expect = 4e-05 Identities = 53/61 (86%) Strand = Plus / Minus Query: 559 tagagaatcgatttgtgtgtcgcagcatacacagcaggttcctttcctcacctggtccca 618 ||||||||| ||||| | ||||||||||| ||||||||||| |||||||| || ||||| Sbjct: 47306 tagagaatcaatttgcgcatcgcagcatacgcagcaggttcccttcctcacttgatccca 47247 Query: 619 t 619 | Sbjct: 47246 t 47246
>dbj|AK069259.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023011H14, full insert sequence Length = 1699 Score = 71.9 bits (36), Expect = 3e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 476 cggcacagcgggcacttgccgccgctgcgcaccagctcgttcgcacatttcgagcacgtg 535 |||||||||||||| || || ||||| || |||| ||| ||||| ||||| || || ||| Sbjct: 1314 cggcacagcgggcatttccctccgcttcgaaccaactcattcgcgcattttgaacatgtg 1255 Query: 536 cacatgtgcccacatctgta 555 |||||||||||||||||||| Sbjct: 1254 cacatgtgcccacatctgta 1235
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 476 cggcacagcgggcacttgccgccgctgcgcaccagctcgttcgcacatttcgagcacgtg 535 |||||||||||||| || || ||||| || |||| ||| ||||| ||||| || || ||| Sbjct: 22475805 cggcacagcgggcatttccctccgcttcgaaccaactcattcgcgcattttgaacatgtg 22475746 Query: 536 cacatgtgcccacatctg 553 |||||||||||||||||| Sbjct: 22475745 cacatgtgcccacatctg 22475728
>dbj|AP005546.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1003_C09 Length = 124746 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 476 cggcacagcgggcacttgccgccgctgcgcaccagctcgttcgcacatttcgagcacgtg 535 |||||||||||||| || || ||||| || |||| ||| ||||| ||||| || || ||| Sbjct: 112294 cggcacagcgggcatttccctccgcttcgaaccaactcattcgcgcattttgaacatgtg 112235 Query: 536 cacatgtgcccacatctg 553 |||||||||||||||||| Sbjct: 112234 cacatgtgcccacatctg 112217
>ref|NM_187649.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2874 Score = 56.0 bits (28), Expect = 2e-04 Identities = 82/100 (82%) Strand = Plus / Minus Query: 508 cagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctgtagagtagagaatc 567 ||||||| |||| || || ||||| |||||||| |||||||||||||| || || || || Sbjct: 1878 cagctcgctcgcgcactttgagcaggtgcacatatgcccacatctgtaaagaagcgagtc 1819 Query: 568 gatttgtgtgtcgcagcatacacagcaggttcctttcctc 607 ||||| |||| ||||| | ||||| |||||||||||| Sbjct: 1818 aatttgcctgtcacagcagatgcagcatgttcctttcctc 1779
>ref|NM_009507.2| Mus musculus von Hippel-Lindau syndrome homolog (Vhlh), mRNA Length = 2757 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 62 cgcacgcacgcacgcgccgccca 84
>gb|BC052417.1| Mus musculus von Hippel-Lindau syndrome homolog, mRNA (cDNA clone MGC:64631 IMAGE:6402536), complete cds Length = 2761 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 61 cgcacgcacgcacgcgccgccca 83
>gb|AF513984.1| Mus musculus Hippel-Lindau disease tumor suppressor VHL (Vhlh) gene, complete cds Length = 8981 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 2709 cgcacgcacgcacgcgccgccca 2731
>dbj|AK161408.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930550K01 product:von Hippel-Lindau syndrome homolog, full insert sequence Length = 807 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 59 cgcacgcacgcacgcgccgccca 81
>dbj|AK159238.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420011G10 product:von Hippel-Lindau syndrome homolog, full insert sequence Length = 2749 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 83 cgcacgcacgcacgcgccgccca 105
>dbj|AK171264.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630320H01 product:von Hippel-Lindau syndrome homolog, full insert sequence Length = 2730 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 64 cgcacgcacgcacgcgccgccca 86
>dbj|AK171604.1| Mus musculus B6-derived CD11 +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F730318C17 product:von Hippel-Lindau syndrome homolog, full insert sequence Length = 2738 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 72 cgcacgcacgcacgcgccgccca 94
>gb|S76748.1| mVHLh1=von Hippel-Lindau disease gene [mice, mRNA, 2757 nt] Length = 2757 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 62 cgcacgcacgcacgcgccgccca 84
>gb|U12570.1|MMU12570 Mus musculus ICR outbred strain von Hippel-Lindau tumor suppressor protein (VHL) mRNA, complete cds Length = 1384 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 78 cgcacgcacgcacgcgccgccca 100
>emb|AL773505.5| Mouse DNA sequence from clone RP23-209M19 on chromosome 2, complete sequence Length = 190991 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 305 agaaaagctaaggaaaacaaacagcag 331 ||||||||||||||||| ||||||||| Sbjct: 12379 agaaaagctaaggaaaaaaaacagcag 12405
>gb|AC153987.4| Mus musculus 6 BAC RP24-430K15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 133371 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 185 cgcacgcacgcacgcgccgccca 207 ||||||||||||||||||||||| Sbjct: 54637 cgcacgcacgcacgcgccgccca 54659
>gb|AC154788.2| Mus musculus BAC clone RP24-470E2 from chromosome 13, complete sequence Length = 158761 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 138350 ttctctctttcttttcctccct 138329
>gb|AC183678.2| Pan troglodytes BAC clone CH251-485O9 from chromosome 22, complete sequence Length = 209755 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 30 atctcatctcatctcaactcaa 51 |||||||||||||||||||||| Sbjct: 81850 atctcatctcatctcaactcaa 81829
>ref|NG_000008.6| Homo sapiens cytochrome P450, family 2, subfamily A (CYP2A) on chromosome 19 Length = 413528 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 333883 ttctctctttcttttcctccct 333862 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 17102 ttctctctttcttttcctccct 17123
>gb|AC146701.9| Mus musculus chromosome 10, clone RP24-142C15, complete sequence Length = 121683 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Minus Query: 295 agacagacccagaaaagctaaggaaa 320 |||||||||||||||||| ||||||| Sbjct: 40828 agacagacccagaaaagcgaaggaaa 40803
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 508 cagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctg 553 ||||||| |||| || || ||||| |||||||| |||||||||||| Sbjct: 434101 cagctcgctcgcgcactttgagcaggtgcacatatgcccacatctg 434056
>emb|CR956399.4| M.truncatula DNA sequence from clone MTH2-7L7 on chromosome 3, complete sequence Length = 142604 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 32 ctcatctcatctcaactcaact 53 |||||||||||||||||||||| Sbjct: 5762 ctcatctcatctcaactcaact 5741
>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three novel genes, a novel gene (MGC45873), a novel gene (DKFZP564C186), a novel gene, a novel gene (DKFZP434H2010), a novel gene (MGC13275), the gene for bHLH factor Hes4 (Hes4), a ribosomal protein L39 (RPL39) pseudogene, a novel gene, the G1P2 gene for interferon alpha-inducible protein (clone IFI-15K), the AGRN gene for agrin, two novel genes and fifteen CpG islands, complete sequence Length = 186759 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 12544 ttctctctttcttttcctccct 12523
>emb|CR382123.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome C of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1753957 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 29 tatctcatctcatctcaactca 50 |||||||||||||||||||||| Sbjct: 643271 tatctcatctcatctcaactca 643250
>dbj|AK125430.1| Homo sapiens cDNA FLJ43441 fis, clone OCBBF2030574 Length = 2450 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 1416 ttctctctttcttttcctccct 1437
>gb|AC123980.19| Pan troglodytes clone rp43-118j16, complete sequence Length = 145016 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactcaa 51 |||||||||||||||||||||| Sbjct: 13025 atctcatctcatctcaactcaa 13046
>gb|AC021736.9| Homo sapiens chromosome 8, clone RP11-115J16, complete sequence Length = 158806 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 51075 ttctctctttcttttcctccct 51096
>gb|AC008962.9| Homo sapiens chromosome 19 clone CTD-2356P16, complete sequence Length = 154169 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 110139 ttctctctttcttttcctccct 110118
>gb|AC155323.9| Mus musculus 10 BAC RP24-162E2 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 161467 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 295 agacagacccagaaaagctaaggaaa 320 |||||||||||||||||| ||||||| Sbjct: 23360 agacagacccagaaaagcgaaggaaa 23385
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 508 cagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctg 553 ||||||| |||| || || ||||| |||||||| |||||||||||| Sbjct: 434099 cagctcgctcgcgcactttgagcaggtgcacatatgcccacatctg 434054
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 185156 ttctctctttcttttcctccct 185177
>gb|AC008537.5|AC008537 Homo sapiens chromosome 19 clone CTC-490E21, complete sequence Length = 169089 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctccct 381 |||||||||||||||||||||| Sbjct: 38102 ttctctctttcttttcctccct 38123
>dbj|AP003983.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1038_A06 Length = 147836 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgcgc 201 |||||||||||||||||||||| Sbjct: 51801 cacgacgcacgcacgcacgcgc 51822
>dbj|AP004161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1311_H06 Length = 139868 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgcgc 201 |||||||||||||||||||||| Sbjct: 107643 cacgacgcacgcacgcacgcgc 107664
>emb|BX323453.7| Zebrafish DNA sequence from clone CH211-212G2 in linkage group 22, complete sequence Length = 212160 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 317 gaaaacaaacagcagtaagatg 338 |||||||||||||||||||||| Sbjct: 55343 gaaaacaaacagcagtaagatg 55322
>emb|AL806528.14| Mouse DNA sequence from clone RP23-190C17 on chromosome 2, complete sequence Length = 214642 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 362 ctctctttcttttcctccctgg 383 |||||||||||||||||||||| Sbjct: 183445 ctctctttcttttcctccctgg 183424
>gb|AC170751.2| Mus musculus BAC clone CH25-484K21 from chromosome 10, complete sequence Length = 105368 Score = 44.1 bits (22), Expect = 0.62 Identities = 25/26 (96%) Strand = Plus / Plus Query: 295 agacagacccagaaaagctaaggaaa 320 |||||||||||||||||| ||||||| Sbjct: 96738 agacagacccagaaaagcgaaggaaa 96763
>emb|AL627403.13| Mouse DNA sequence from clone RP23-29F4 on chromosome X, complete sequence Length = 184697 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccctg 382 |||||||||||||||||||||| Sbjct: 94931 tctctctttcttttcctccctg 94910
>gb|AC113930.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1384D03, complete sequence Length = 116214 Score = 44.1 bits (22), Expect = 0.62 Identities = 40/46 (86%) Strand = Plus / Minus Query: 508 cagctcgttcgcacatttcgagcacgtgcacatgtgcccacatctg 553 ||||||| |||| || || ||||| |||||||| |||||||||||| Sbjct: 32561 cagctcgctcgcgcactttgagcaggtgcacatatgcccacatctg 32516
>gb|AC164170.7| Mus musculus 10 BAC RP24-419C12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 158496 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 32630 tctctctttcttttcctccct 32650
>gb|AY493262.1| Anas platyrhynchos microsatellite CAUD017 sequence Length = 374 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 281 tctctctttcttttcctccct 301
>gb|AC158641.12| Mus musculus 10 BAC RP23-461E22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 186390 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 38100 tctctctttcttttcctccct 38080
>ref|XM_530660.1| PREDICTED: Pan troglodytes LOC460802 (LOC460802), mRNA Length = 559 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 agaaaagctaaggaaaacaaa 325 ||||||||||||||||||||| Sbjct: 507 agaaaagctaaggaaaacaaa 487
>gb|AC137156.3| Mus musculus BAC clone RP23-118K10 from chromosome 15, complete sequence Length = 205599 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ccagaaaagctaaggaaaaca 323 ||||||||||||||||||||| Sbjct: 19048 ccagaaaagctaaggaaaaca 19068
>gb|AC161355.3| Mus musculus chromosome 1, clone RP24-149A24, complete sequence Length = 179242 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 50009 tctctctttcttttcctccct 50029
>gb|AC125161.3| Mus musculus BAC clone RP24-410I2 from chromosome 1, complete sequence Length = 142794 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 66235 tctctctttcttttcctccct 66215
>gb|AC137744.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0074L11, complete sequence Length = 180703 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gcgccgcccatcgccgccgtg 218 ||||||||||||||||||||| Sbjct: 123733 gcgccgcccatcgccgccgtg 123713
>emb|CR656113.3|CNS0F587 Tetraodon nigroviridis full-length cDNA Length = 1149 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 179 acacgacgcacgcacgcacgc 199 ||||||||||||||||||||| Sbjct: 38 acacgacgcacgcacgcacgc 18
>gb|AC111144.8| Mus musculus chromosome 6, clone RP23-373C23, complete sequence Length = 198667 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tcatctcatctcaactcaact 53 ||||||||||||||||||||| Sbjct: 56513 tcatctcatctcaactcaact 56533 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactcaact 53 ||||||||||| |||||||||||| Sbjct: 56515 atctcatctcaactcaactcaact 56538
>gb|AC163211.5| Mus musculus chromosome 7, clone RP24-341C24, complete sequence Length = 148004 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 95126 tctctctttcttttcctccct 95106
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 333 aagatgaagaagaagcaggggtctt 357 |||||||||||||||||||| |||| Sbjct: 83861 aagatgaagaagaagcagggttctt 83885
>emb|AL391495.16| Human DNA sequence from clone RP11-324B6 on chromosome Xq13.2-21.1 Contains a tetratricopeptide repeat domain 3 (TTC3) pseudogene and the gene for hepatocellular carcinoma-associated protein (HCA3), complete sequence Length = 142952 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 354 tcttgcttctctctttctttt 374 ||||||||||||||||||||| Sbjct: 95421 tcttgcttctctctttctttt 95441
>emb|BX013351.1|CNS08IGR Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA20AD09 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 689 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 tgtgtcgcagcatacacagca 594 ||||||||||||||||||||| Sbjct: 539 tgtgtcgcagcatacacagca 519
>emb|BX006075.1|CNS08CUN Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAA10BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 952 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 574 tgtgtcgcagcatacacagca 594 ||||||||||||||||||||| Sbjct: 526 tgtgtcgcagcatacacagca 546
>emb|BX006074.1|CNS08CUM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA10BD10 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 667 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 tgtgtcgcagcatacacagca 594 ||||||||||||||||||||| Sbjct: 553 tgtgtcgcagcatacacagca 533
>gb|AC163291.3| Mus musculus BAC clone RP23-263M4 from chromosome 15, complete sequence Length = 208289 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 303 ccagaaaagctaaggaaaaca 323 ||||||||||||||||||||| Sbjct: 195929 ccagaaaagctaaggaaaaca 195949
>gb|AC023742.4| Drosophila melanogaster X BAC RP98-43C24 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 172203 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tcatctcatctcaactcaact 53 ||||||||||||||||||||| Sbjct: 171243 tcatctcatctcaactcaact 171223
>gb|AC023747.4| Drosophila melanogaster X BAC RP98-38L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 167097 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 33 tcatctcatctcaactcaact 53 ||||||||||||||||||||| Sbjct: 145388 tcatctcatctcaactcaact 145408
>gb|AC092993.3| Homo sapiens 3 BAC RP11-649C16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 147859 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 305 agaaaagctaaggaaaacaaa 325 ||||||||||||||||||||| Sbjct: 88891 agaaaagctaaggaaaacaaa 88911
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gcgccgcccatcgccgccgtg 218 ||||||||||||||||||||| Sbjct: 21771680 gcgccgcccatcgccgccgtg 21771660 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 295760 gaaaagctaaggaaaacaaa 295779
>emb|AL683856.10| Mouse DNA sequence from clone RP23-46J2 on chromosome X, complete sequence Length = 224461 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 297 acagacccagaaaagctaagg 317 ||||||||||||||||||||| Sbjct: 85034 acagacccagaaaagctaagg 85054
>ref|XM_557993.1| Anopheles gambiae str. PEST ENSANGP00000027109 (ENSANGG00000000594), partial mRNA Length = 625 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 tgtgtcgcagcatacacagca 594 ||||||||||||||||||||| Sbjct: 399 tgtgtcgcagcatacacagca 379
>ref|XM_314634.2| Anopheles gambiae str. PEST ENSANGP00000000661 (ENSANGG00000000594), partial mRNA Length = 850 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 574 tgtgtcgcagcatacacagca 594 ||||||||||||||||||||| Sbjct: 543 tgtgtcgcagcatacacagca 523
>gb|AC101702.11| Mus musculus chromosome 1, clone RP23-247G20, complete sequence Length = 178193 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 157437 tctctctttcttttcctccct 157417
>gb|AE003431.5| Drosophila melanogaster chromosome X, section 15 of 74 of the complete sequence Length = 310993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tcatctcatctcaactcaact 53 ||||||||||||||||||||| Sbjct: 128311 tcatctcatctcaactcaact 128291
>gb|AC102906.12| Mus musculus chromosome 7, clone RP24-291N22, complete sequence Length = 132746 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 361 tctctctttcttttcctccct 381 ||||||||||||||||||||| Sbjct: 101839 tctctctttcttttcctccct 101859
>dbj|AK113988.1| Ciona intestinalis cDNA, clone:cicl020k04, full insert sequence Length = 1407 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 305 agaaaagctaaggaaaacaaa 325 ||||||||||||||||||||| Sbjct: 949 agaaaagctaaggaaaacaaa 929
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 198 gcgccgcccatcgccgccgtg 218 ||||||||||||||||||||| Sbjct: 22081879 gcgccgcccatcgccgccgtg 22081859 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 295760 gaaaagctaaggaaaacaaa 295779
>gb|AC154029.4| Mus musculus 6 BAC RP23-26J14 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188537 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 tcatctcatctcaactcaact 53 ||||||||||||||||||||| Sbjct: 13936 tcatctcatctcaactcaact 13916 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 atctcatctcatctcaactcaact 53 ||||||||||| |||||||||||| Sbjct: 13934 atctcatctcaactcaactcaact 13911
>emb|AL645972.10| Mouse DNA sequence from clone RP23-274J5 on chromosome 11, complete sequence Length = 192586 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 gcaggttcctttcctcacctg 612 ||||||||||||||||||||| Sbjct: 147064 gcaggttcctttcctcacctg 147084
>ref|XM_641802.1| Dictyostelium discoideum hypothetical protein (DDB0216619), partial mRNA Length = 1509 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tgttgtataatttacagcac 441 |||||||||||||||||||| Sbjct: 474 tgttgtataatttacagcac 455
>gb|AC169520.2| Mus musculus BAC clone RP23-35C6 from chromosome 19, complete sequence Length = 209374 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 182 cgacgcacgcacgcacgcgc 201 |||||||||||||||||||| Sbjct: 55135 cgacgcacgcacgcacgcgc 55116
>gb|AC159452.1| Trypanosoma brucei chromosome 5 clone RPCI93-5K5, complete sequence Length = 158740 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 318 aaaacaaacagcagtaagatgaag 341 |||| ||||||||||||||||||| Sbjct: 93691 aaaaaaaacagcagtaagatgaag 93668
>gb|AC154144.9| Mus musculus chromosome 1, clone RP24-289K8, complete sequence Length = 158556 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactc 49 |||||||||||||||||||| Sbjct: 6329 atctcatctcatctcaactc 6348 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactcaact 53 |||||||||||||||| ||||||| Sbjct: 6324 atctcatctcatctcatctcaact 6347
>gb|AC166063.4| Mus musculus BAC clone RP23-21L22 from chromosome 19, complete sequence Length = 232698 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 cgacgcacgcacgcacgcgc 201 |||||||||||||||||||| Sbjct: 207120 cgacgcacgcacgcacgcgc 207139
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cgcgccgcccatcgccgccg 216 |||||||||||||||||||| Sbjct: 2018503 cgcgccgcccatcgccgccg 2018522
>gb|AC138359.8| Mus musculus chromosome 1, clone RP24-383H12, complete sequence Length = 217891 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactc 49 |||||||||||||||||||| Sbjct: 193578 atctcatctcatctcaactc 193597 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactcaact 53 |||||||||||||||| ||||||| Sbjct: 193573 atctcatctcatctcatctcaact 193596
>gb|AC102155.10| Mus musculus chromosome 18, clone RP23-334J12, complete sequence Length = 189666 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 cttctctctttcttttcctccctg 382 ||||||||| |||||||||||||| Sbjct: 91155 cttctctctctcttttcctccctg 91178
>gb|AY654004.1| Penaeus monodon clone AFE31M25 sex and growth traits AFLP marker sequence Length = 311 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctccctggttcc 387 ||||||||||||||||||| || ||||| Sbjct: 259 ttctctctttcttttcctctctcgttcc 232
>gb|AC122922.4| Mus musculus BAC clone RP23-34M5 from chromosome 1, complete sequence Length = 223959 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 360 ttctctctttcttttcctcc 379 |||||||||||||||||||| Sbjct: 206436 ttctctctttcttttcctcc 206417
>gb|AC119382.7| Rattus norvegicus 4 BAC CH230-125G2 (Children's Hospital Oakland Research Institute) complete sequence Length = 189442 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 356 ttgcttctctctttcttttc 375 |||||||||||||||||||| Sbjct: 123162 ttgcttctctctttcttttc 123181
>gb|AC124212.2| Mus musculus chromosome X clone CT7-532E7 map qA7.1, complete sequence Length = 109783 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 76090 ctctctttcttttcctccct 76109
>ref|XM_584828.2| PREDICTED: Bos taurus similar to olfactory receptor 437 (LOC508101), mRNA Length = 1044 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gttgggtccctttccctgatgctg 128 |||||| ||||||||||||||||| Sbjct: 646 gttgggcccctttccctgatgctg 669
>ref|XM_592806.2| PREDICTED: Bos taurus similar to olfactory receptor 437 (LOC514891), mRNA Length = 1506 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 gttgggtccctttccctgatgctg 128 |||||| ||||||||||||||||| Sbjct: 151 gttgggcccctttccctgatgctg 174
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcgccgccgtgctgggcaa 226 |||||||||||||||||||| Sbjct: 2647624 atcgccgccgtgctgggcaa 2647605
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cgcgccgcccatcgccgccg 216 |||||||||||||||||||| Sbjct: 1413331 cgcgccgcccatcgccgccg 1413312
>gb|AC134560.5| Mus musculus BAC clone RP24-100B13 from chromosome 16, complete sequence Length = 175179 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 31 tctcatctcatctcaactca 50 |||||||||||||||||||| Sbjct: 64922 tctcatctcatctcaactca 64903
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 238 atatatatgtatgtaatgtg 257 |||||||||||||||||||| Sbjct: 94291 atatatatgtatgtaatgtg 94272
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 495 cgccgctgcgcaccagctcg 514 |||||||||||||||||||| Sbjct: 5668304 cgccgctgcgcaccagctcg 5668323
>gb|AC102091.7| Mus musculus chromosome 18, clone RP23-9K20, complete sequence Length = 252563 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 27 agtatctcatctcatctcaactca 50 ||||||||||||||||||| |||| Sbjct: 100705 agtatctcatctcatctcatctca 100728
>gb|AC165335.3| Mus musculus BAC clone RP24-481H19 from chromosome 5, complete sequence Length = 212783 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 8125 acagacccagaaaagctaag 8144
>gb|AC102547.8| Mus musculus chromosome 7, clone RP23-134L4, complete sequence Length = 220452 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccc 380 |||||||||||||||||||| Sbjct: 184096 tctctctttcttttcctccc 184077
>gb|AC163434.5| Mus musculus chromosome 7, clone RP23-320N24, complete sequence Length = 224337 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 361 tctctctttcttttcctccc 380 |||||||||||||||||||| Sbjct: 86891 tctctctttcttttcctccc 86910
>gb|AC121097.6| Mus musculus chromosome 13, clone RP24-449F13, complete sequence Length = 217251 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ataacacgacgcacgcacgcacgc 199 |||||| ||||||||||||||||| Sbjct: 74613 ataacaggacgcacgcacgcacgc 74636
>gb|AC131521.5| Rattus norvegicus 2 BAC CH230-275M7 (Children's Hospital Oakland Research Institute) complete sequence Length = 191106 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cttctctctttcttttcctc 378 |||||||||||||||||||| Sbjct: 40247 cttctctctttcttttcctc 40228
>ref|XM_989631.1| PREDICTED: Mus musculus nucleoporin 210-like (Nup210l), mRNA Length = 5691 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 676 tcaaggctgcagacactttcttgt 699 |||||||||||| ||||||||||| Sbjct: 724 tcaaggctgcagccactttcttgt 701
>ref|XM_982763.1| PREDICTED: Mus musculus nucleoporin 210-like (Nup210l), mRNA Length = 5691 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 676 tcaaggctgcagacactttcttgt 699 |||||||||||| ||||||||||| Sbjct: 724 tcaaggctgcagccactttcttgt 701
>gb|AC141481.4| Mus musculus BAC clone RP23-145E16 from chromosome 15, complete sequence Length = 195197 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 67048 acagacccagaaaagctaag 67067
>gb|AC132608.2| Mus musculus BAC clone RP23-451E12 from chromosome 18, complete sequence Length = 201478 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 359 cttctctctttcttttcctccctg 382 ||||||||| |||||||||||||| Sbjct: 167976 cttctctctctcttttcctccctg 167999
>emb|CR318604.12| Zebrafish DNA sequence from clone CH211-222E24 in linkage group 11, complete sequence Length = 180092 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 atatgtatgtaatgtgaatc 261 |||||||||||||||||||| Sbjct: 87490 atatgtatgtaatgtgaatc 87471
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 catcgccgccgtgctgggca 225 |||||||||||||||||||| Sbjct: 1390715 catcgccgccgtgctgggca 1390696
>gb|AC124607.4| Mus musculus BAC clone RP23-84H10 from chromosome 12, complete sequence Length = 168842 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 82866 acagacccagaaaagctaag 82885
>gb|AC146608.2| Mus musculus BAC clone RP23-159D24 from chromosome 12, complete sequence Length = 173569 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 146864 acagacccagaaaagctaag 146845
>gb|AC073590.5| Mus musculus chromosome 12 clone RP23-206K17, complete sequence Length = 204107 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 155701 ctctctttcttttcctccct 155682
>gb|AC117226.3| Mus musculus BAC clone RP23-377C22 from 13, complete sequence Length = 169858 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 176 ataacacgacgcacgcacgcacgc 199 |||||| ||||||||||||||||| Sbjct: 126534 ataacaggacgcacgcacgcacgc 126557
>gb|AC110538.6| Mus musculus chromosome 5, clone RP23-71L23, complete sequence Length = 205923 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 28852 acagacccagaaaagctaag 28833
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 502 gcgcaccagctcgttcgcacattt 525 |||||||||||||||||| ||||| Sbjct: 2569827 gcgcaccagctcgttcgcccattt 2569804
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 ccatcgccgccgtgctgggcaagg 228 |||||||||||||||||| ||||| Sbjct: 565681 ccatcgccgccgtgctggccaagg 565704
>ref|XM_793647.1| PREDICTED: Strongylocentrotus purpuratus similar to CG9915-PA (LOC594198), mRNA Length = 2358 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 334 agatgaagaagaagcagggg 353 |||||||||||||||||||| Sbjct: 993 agatgaagaagaagcagggg 1012
>gb|AY145471.1| Rachiplusia ou multiple nucleopolyhedrovirus, complete genome Length = 131526 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 ctactactaacaactattgc 148 |||||||||||||||||||| Sbjct: 119140 ctactactaacaactattgc 119121
>emb|AL031319.5|HS364I1 Human DNA sequence from clone RP3-364I1 on chromosome Xq23 Contains a novel gene, part of the AMMECR1 gene for Alport syndrome (mental retardation, midface hypoplasia and elliptocytosis chromosomal region, gene 1) (FLJ341111), the gene for a novel protein similar to guanine nucleotide binding protein (G protein) gamma 5 (GNG5) and a CpG island, complete sequence Length = 98770 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 305 agaaaagctaaggaaaacaa 324 |||||||||||||||||||| Sbjct: 53913 agaaaagctaaggaaaacaa 53894
>emb|AL034407.1|HS657J8 Human DNA sequence from clone RP4-657J8 on chromosome Xq26.1-26.3, complete sequence Length = 98954 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 atatatgtatgtaatgtgaa 259 |||||||||||||||||||| Sbjct: 84612 atatatgtatgtaatgtgaa 84593
>emb|Z75028.1|SCYOR120W S.cerevisiae chromosome XV reading frame ORF YOR120w Length = 2051 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 agtatctcatctcatctcaa 46 |||||||||||||||||||| Sbjct: 73 agtatctcatctcatctcaa 92
>emb|X94335.1|SC130KBXV S.cerevisiae 130kb DNA fragment from chromosome XV Length = 129528 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 agtatctcatctcatctcaa 46 |||||||||||||||||||| Sbjct: 73843 agtatctcatctcatctcaa 73862
>emb|X90518.1|SCXVORFS S.cerevisiae DNA of 51 Kb from chromosome XV right arm Length = 50984 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 agtatctcatctcatctcaa 46 |||||||||||||||||||| Sbjct: 20716 agtatctcatctcatctcaa 20735
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 atctcatctcatctcaactcaact 53 |||||||||||||||| ||||||| Sbjct: 1111009 atctcatctcatctcatctcaact 1110986 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 atctcatctcatctcaactc 49 |||||||||||||||||||| Sbjct: 1111004 atctcatctcatctcaactc 1110985
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 atcgccgccgtgctgggcaa 226 |||||||||||||||||||| Sbjct: 827662 atcgccgccgtgctgggcaa 827643
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cgcgccgcccatcgccgccg 216 |||||||||||||||||||| Sbjct: 1285304 cgcgccgcccatcgccgccg 1285285
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 896214 aacaaacagcagtaagatga 896195
>gb|AC160551.4| Mus musculus chromosome 5, clone RP23-296C20, complete sequence Length = 173331 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 107002 acagacccagaaaagctaag 106983
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02, complete sequence Length = 112404 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gacgcacgcacgcacgcgcc 202 |||||||||||||||||||| Sbjct: 51998 gacgcacgcacgcacgcgcc 52017
>emb|AL662996.3|OSJN00198 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0015N08, complete sequence Length = 129037 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cacgcacgcacgcgccgccc 206 |||||||||||||||||||| Sbjct: 126198 cacgcacgcacgcgccgccc 126179
>emb|AL662968.3|OSJN00168 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035M09, complete sequence Length = 152732 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cacgcacgcacgcgccgccc 206 |||||||||||||||||||| Sbjct: 54221 cacgcacgcacgcgccgccc 54202
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gacgcacgcacgcacgcgcc 202 |||||||||||||||||||| Sbjct: 144757 gacgcacgcacgcacgcgcc 144776
>emb|AL590447.1|CNS07EGE chromosome VII of strain GB-M1 of Encephalitozoon cuniculi (Microspora) Length = 226576 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 300 gacccagaaaagctaaggaaaaca 323 |||||||||||||||| ||||||| Sbjct: 177438 gacccagaaaagctaaagaaaaca 177415
>emb|AL161507.2|ATCHRIV19 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 19 Length = 183181 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 caggttcctttcctcacctg 612 |||||||||||||||||||| Sbjct: 80647 caggttcctttcctcacctg 80628
>emb|AL844182.10| Mouse DNA sequence from clone RP23-399H17 on chromosome 4, complete sequence Length = 201590 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 83875 acagacccagaaaagctaag 83894
>emb|BX088573.4| Mouse DNA sequence from clone RP23-78N10 on chromosome 4 Contains the 3' end of the Dbccr1 gene for deleted in bladder cancer chromosome region candidate 1 (human), complete sequence Length = 203865 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 297 acagacccagaaaagctaag 316 |||||||||||||||||||| Sbjct: 68530 acagacccagaaaagctaag 68511
>gb|AY834753.1| Cystobacter fuscus cystothiazole A gene cluster, complete sequence Length = 63876 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 492 tgccgccgctgcgcaccagctcgt 515 |||||||| ||||||||||||||| Sbjct: 60205 tgccgccggtgcgcaccagctcgt 60228
>gb|AC010299.8| Homo sapiens chromosome 5 clone CTB-174J2, complete sequence Length = 107689 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 61333 cacgacgcacgcacgcacgc 61352
>gb|AE005964.1| Caulobacter crescentus CB15 section 290 of 359 of the complete genome Length = 10554 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 tcgccgccgtgctgggcaag 227 |||||||||||||||||||| Sbjct: 3255 tcgccgccgtgctgggcaag 3274
>gb|AE011945.1| Xanthomonas axonopodis pv. citri str. 306, section 323 of 469 of the complete genome Length = 10542 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 cgcgccgcccatcgccgccg 216 |||||||||||||||||||| Sbjct: 5470 cgcgccgcccatcgccgccg 5489
>dbj|AK054756.1| Homo sapiens cDNA FLJ30194 fis, clone BRACE2001352 Length = 2044 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 354 tcttgcttctctctttcttttcctccct 381 ||||||||||||||||| |||| ||||| Sbjct: 765 tcttgcttctctctttcctttcttccct 792
>dbj|AK024076.1| Homo sapiens cDNA FLJ14014 fis, clone HEMBA1000290 Length = 2075 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 184 cacgacgcacgcacgcacgc 203
>gb|AC084089.4| Homo sapiens chromosome 8, clone CTD-2369J14, complete sequence Length = 30579 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gcttctctctttcttttcctccct 381 ||||||||||||| |||||||||| Sbjct: 6955 gcttctctctttcgtttcctccct 6932
>gb|AC067743.10| Homo sapiens chromosome 10 clone RP11-441P16, complete sequence Length = 177795 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 240 atatatgtatgtaatgtgaa 259 |||||||||||||||||||| Sbjct: 76122 atatatgtatgtaatgtgaa 76141
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 988617 aacaaacagcagtaagatga 988598
>gb|AC110612.3| Homo sapiens BAC clone RP11-416B16 from 4, complete sequence Length = 158472 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 354 tcttgcttctctctttcttttcctccct 381 ||||||||||||||||| |||| ||||| Sbjct: 107325 tcttgcttctctctttcctttcttccct 107298
>gb|AC096642.2| Homo sapiens chromosome 1 clone RP11-392O17, complete sequence Length = 179048 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 356 ttgcttctctctttcttttc 375 |||||||||||||||||||| Sbjct: 161515 ttgcttctctctttcttttc 161496
>gb|AC007860.6| Homo sapiens 8 BAC RP11-709E21 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 186298 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 358 gcttctctctttcttttcctccct 381 ||||||||||||| |||||||||| Sbjct: 96542 gcttctctctttcgtttcctccct 96519
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 951771 aacaaacagcagtaagatga 951752
>gb|S70378.1| Der f II=group II major allergen [Dermatophagoides farinae=mites, mRNA Partial, 517 nt] Length = 517 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ctattgctacccatggtaaa 161 |||||||||||||||||||| Sbjct: 398 ctattgctacccatggtaaa 417
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 848160 aacaaacagcagtaagatga 848141
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 928297 aacaaacagcagtaagatga 928278
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 189 cgcacgcacgcgccgcccatcgcc 212 |||||||||||||||| ||||||| Sbjct: 4785213 cgcacgcacgcgccgcacatcgcc 4785190
>dbj|AK019752.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930548O11 product:hypothetical protein, full insert sequence Length = 2637 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 676 tcaaggctgcagacactttcttgt 699 |||||||||||| ||||||||||| Sbjct: 758 tcaaggctgcagccactttcttgt 735
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 187 cacgcacgcacgcgccgccc 206 |||||||||||||||||||| Sbjct: 30650490 cacgcacgcacgcgccgccc 30650471 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 gacgcacgcacgcacgcgcc 202 |||||||||||||||||||| Sbjct: 20082094 gacgcacgcacgcacgcgcc 20082113 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cttctctctttcttttcctc 378 |||||||||||||||||||| Sbjct: 6097436 cttctctctttcttttcctc 6097417
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 312862 gaaaagctaaggaaaacaaa 312881
>gb|AF346905.1|AF346905 Dermatophagoides farinae allergen Def f II precursor, mRNA, partial cds Length = 558 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ctattgctacccatggtaaa 161 |||||||||||||||||||| Sbjct: 483 ctattgctacccatggtaaa 502
>gb|AC010214.7|AC010214 Drosophila melanogaster, chromosome 2L, region 34A-34A, BAC clone BACR27F17, complete sequence Length = 174036 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 30 atctcatctcatctcaactcaact 53 ||||||||||| |||||||||||| Sbjct: 115266 atctcatctcagctcaactcaact 115243
>emb|AL662939.4|OSJN00143 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0013J13, complete sequence Length = 137572 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cttctctctttcttttcctc 378 |||||||||||||||||||| Sbjct: 120834 cttctctctttcttttcctc 120815
>gb|AC093728.2| Homo sapiens BAC clone RP11-7F8 from 4, complete sequence Length = 114434 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 421 ttgttgtataatttacagca 440 |||||||||||||||||||| Sbjct: 25667 ttgttgtataatttacagca 25648
>dbj|AB111925.2| Oryzias latipes gene, complete cds Length = 70179 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aacagcagtaagatgaagaa 343 |||||||||||||||||||| Sbjct: 26447 aacagcagtaagatgaagaa 26428
>gb|AC013441.9| Homo sapiens BAC clone RP11-310E6 from 2, complete sequence Length = 182507 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 358 gcttctctctttcttttcct 377 |||||||||||||||||||| Sbjct: 19916 gcttctctctttcttttcct 19897
>gb|AC136601.2| Homo sapiens chromosome 5 clone RP11-1259L22, complete sequence Length = 186323 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 135621 cacgacgcacgcacgcacgc 135640
>gb|AC136605.2| Homo sapiens chromosome 5 clone RP11-1380A14, complete sequence Length = 171395 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 148206 cacgacgcacgcacgcacgc 148225
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 tgccgccgctgcgcaccagc 511 |||||||||||||||||||| Sbjct: 4916067 tgccgccgctgcgcaccagc 4916048
>ref|XM_344284.2| PREDICTED: Rattus norvegicus similar to KCNMA1 protein (LOC498438), mRNA Length = 1441 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 293 ggagacagacccagaaaagc 312 |||||||||||||||||||| Sbjct: 931 ggagacagacccagaaaagc 950
>gb|AY086069.1| Arabidopsis thaliana clone 20973 mRNA, complete sequence Length = 710 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 359 cttctctctttcttttcctc 378 |||||||||||||||||||| Sbjct: 20 cttctctctttcttttcctc 1
>ref|XM_345234.2| PREDICTED: Rattus norvegicus similar to hypothetical protein (predicted) (LOC365844), mRNA Length = 5646 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 676 tcaaggctgcagacactttcttgt 699 |||||||||||| ||||||||||| Sbjct: 724 tcaaggctgcagccactttcttgt 701
>dbj|AB195580.1| Dermatophagoides farinae Der f 2 mRNA for group 2 allergen, complete cds Length = 441 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ctattgctacccatggtaaa 161 |||||||||||||||||||| Sbjct: 410 ctattgctacccatggtaaa 429
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 912245 aacaaacagcagtaagatga 912226
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 912333 aacaaacagcagtaagatga 912314
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 490 cttgccgccgctgcgcacca 509 |||||||||||||||||||| Sbjct: 3068749 cttgccgccgctgcgcacca 3068768
>gb|AC114598.9| Mus musculus chromosome 8, clone RP23-301G13, complete sequence Length = 211410 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 355 cttgcttctctctttctttt 374 |||||||||||||||||||| Sbjct: 71946 cttgcttctctctttctttt 71965
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 cgccgctgcgcaccagctcg 514 |||||||||||||||||||| Sbjct: 229882 cgccgctgcgcaccagctcg 229863
>emb|CT824641.5| Human DNA sequence from clone XX-HCC1954_31F14, complete sequence Length = 110526 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 358 gcttctctctttcttttcctccct 381 ||||||||||||| |||||||||| Sbjct: 54901 gcttctctctttcgtttcctccct 54924
>tpe|BN000872.1| TPA: TPA_exp: Mus musculus immunoglobulin heavy chain variable region locus, strain C57BL/6 Length = 2500000 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 1681347 ctctctttcttttcctccct 1681366
>gb|AF147265.1|T6L9 Arabidopsis thaliana BAC T6L9 Length = 54573 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 593 caggttcctttcctcacctg 612 |||||||||||||||||||| Sbjct: 14749 caggttcctttcctcacctg 14730
>emb|X96739.1|CSRIO1GEN S.cerevisiae RIO1 gene Length = 1400 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 agtatctcatctcatctcaa 46 |||||||||||||||||||| Sbjct: 267 agtatctcatctcatctcaa 248
>emb|Z75027.1|SCYOR119C S.cerevisiae chromosome XV reading frame ORF YOR119c Length = 2553 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 agtatctcatctcatctcaa 46 |||||||||||||||||||| Sbjct: 1759 agtatctcatctcatctcaa 1778
>gb|AE003638.2| Drosophila melanogaster chromosome 2L, section 47 of 83 of the complete sequence Length = 254309 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 30 atctcatctcatctcaactcaact 53 ||||||||||| |||||||||||| Sbjct: 203197 atctcatctcagctcaactcaact 203220
>gb|AC119809.10| Mus musculus chromosome 1, clone RP24-505E24, complete sequence Length = 154931 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctcc 379 |||||||||||||||||||| Sbjct: 66448 ttctctctttcttttcctcc 66467
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 944205 aacaaacagcagtaagatga 944186
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 cgccgctgcgcaccagctcg 514 |||||||||||||||||||| Sbjct: 293973 cgccgctgcgcaccagctcg 293954
>gb|BC037238.1| Homo sapiens hypothetical protein LOC85007, isoform 2, mRNA (cDNA clone IMAGE:5198523), with apparent retained intron Length = 2806 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 361 cacgacgcacgcacgcacgc 380
>gb|BC028002.1| Homo sapiens hypothetical protein LOC85007, isoform 2, mRNA (cDNA clone IMAGE:5212110) Length = 2415 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 343 cacgacgcacgcacgcacgc 362
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 cgcgccgcccatcgccgccg 216 |||||||||||||||||||| Sbjct: 413328 cgcgccgcccatcgccgccg 413309
>emb|CT025657.12| Mouse DNA sequence from clone RP23-342N19 on chromosome 9, complete sequence Length = 202383 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 527 gagcacgtgcacatgtgcccacat 550 ||||||||||| |||||||||||| Sbjct: 73853 gagcacgtgcagatgtgcccacat 73830
>gb|U62631.2|HSU62631 Human B-cell receptor CD22-B isoform and alternatively spliced B-cell receptor CD22-A isoform (CD22) gene, complete cds, complete sequence Length = 34791 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctcc 379 |||||||||||||||||||| Sbjct: 16556 ttctctctttcttttcctcc 16575
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 312862 gaaaagctaaggaaaacaaa 312881
>emb|BX000501.4|CNS08CDR Oryza sativa chromosome 11, . BAC OSJNBa0032J07 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 160673 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 9233 gaaaagctaaggaaaacaaa 9214
>emb|BX000494.2|CNS08CDK Oryza sativa chromosome 12, . BAC OSJNBa0052H10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152222 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 45913 gaaaagctaaggaaaacaaa 45932
>emb|BX000497.1|CNS08CDN Oryza sativa chromosome 11, . BAC OSJNBa0010K05 of library OSJNBa from chromosome 11 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 164143 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 306 gaaaagctaaggaaaacaaa 325 |||||||||||||||||||| Sbjct: 3078 gaaaagctaaggaaaacaaa 3097
>gb|AC161879.5| Mus musculus BAC clone RP23-264A15 from chromosome 1, complete sequence Length = 206995 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 361 tctctctttcttttcctccc 380 |||||||||||||||||||| Sbjct: 146544 tctctctttcttttcctccc 146525
>emb|AM041147.2| Mus musculus chromosome 12 BAC clone 407i12 Length = 136395 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 72633 ctctctttcttttcctccct 72614
>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence Length = 206677 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 tctgtagagtagagaatcga 569 |||||||||||||||||||| Sbjct: 155883 tctgtagagtagagaatcga 155864
>gb|AC134249.4| Mus musculus BAC clone RP23-359K17 from 12, complete sequence Length = 190423 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 530 cacgtgcacatgtgcccaca 549 |||||||||||||||||||| Sbjct: 166660 cacgtgcacatgtgcccaca 166641
>emb|AL929585.11| Mouse DNA sequence from clone RP23-97O7 on chromosome 4, complete sequence Length = 246011 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gatgctgctactactaacaa 141 |||||||||||||||||||| Sbjct: 140143 gatgctgctactactaacaa 140162
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 879766 aacaaacagcagtaagatga 879747
>emb|AJ972404.2| Mus musculus chromosome 12 BAC clone 4k8 Length = 152217 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 88455 ctctctttcttttcctccct 88436
>emb|CR382131.1| Yarrowia lipolytica chromosome E of strain CLIB 122 of Yarrowia lipolytica Length = 4224103 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 tcatctcatctcaactcaac 52 |||||||||||||||||||| Sbjct: 2262825 tcatctcatctcaactcaac 2262844
>emb|AL928578.6| Mouse DNA sequence from clone RP23-33L19 on chromosome 2, complete sequence Length = 190906 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 362 ctctctttcttttcctccct 381 |||||||||||||||||||| Sbjct: 77619 ctctctttcttttcctccct 77638
>gb|AC093290.4| Homo sapiens chromosome 5 clone RP11-47L17, complete sequence Length = 179443 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cacgacgcacgcacgcacgc 199 |||||||||||||||||||| Sbjct: 1192 cacgacgcacgcacgcacgc 1173
>dbj|AB000899.1| Oryzias latipes mRNA for membrane guanylyl cyclase OLGC3, complete cds Length = 4042 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 aacagcagtaagatgaagaa 343 |||||||||||||||||||| Sbjct: 1391 aacagcagtaagatgaagaa 1372
>dbj|D10448.1|DEPDER2 Dermatophagoides farinae mRNA for mite allergen Der f II precursor, complete cds, clone:pFL2 Length = 528 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ctattgctacccatggtaaa 161 |||||||||||||||||||| Sbjct: 433 ctattgctacccatggtaaa 452
>dbj|D10447.1|DEPDER1 Dermatophagoides farinae mRNA for mite allergen Der f II precursor, partial cds, clone:pFL1 Length = 483 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ctattgctacccatggtaaa 161 |||||||||||||||||||| Sbjct: 388 ctattgctacccatggtaaa 407
>dbj|AB013004.1| Homo sapiens CD22 gene variant 10, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctcc 379 |||||||||||||||||||| Sbjct: 416 ttctctctttcttttcctcc 435
>dbj|AB013003.1| Homo sapiens CD22 gene variant 9, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 360 ttctctctttcttttcctcc 379 |||||||||||||||||||| Sbjct: 416 ttctctctttcttttcctcc 435
>dbj|AB015981.1| Staphylococcus aureus genes for OrfA, MnhA, MnhB, MnhC, MnhD, MnhE, MnhF and MnhG, complete cds Length = 6995 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 aacaaacagcagtaagatga 339 |||||||||||||||||||| Sbjct: 6613 aacaaacagcagtaagatga 6632 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,708,421 Number of Sequences: 3902068 Number of extensions: 7708421 Number of successful extensions: 276016 Number of sequences better than 10.0: 206 Number of HSP's better than 10.0 without gapping: 211 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 272523 Number of HSP's gapped (non-prelim): 3471 length of query: 704 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 681 effective length of database: 17,143,297,704 effective search space: 11674585736424 effective search space used: 11674585736424 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
