ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22i23 |
|---|---|
| Clone Library Name | barley_pub |
>MSRA_STRP8 (Q8P272) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)| (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) Length = 169 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 672 GACYWYIA*P*EE-----A*RXGASNGNPSEPAYEHHCCKSSVYGE 550 G C+W + P EE + R G + G+ P+YE C K++ + E Sbjct: 8 GGCFWCMVQPFEEQAGILSVRSGYTGGHLPNPSYEQVCAKTTGHTE 53
>MSRA_STRP6 (Q5XDH1) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)| (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) Length = 169 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 672 GACYWYIA*P*EE-----A*RXGASNGNPSEPAYEHHCCKSSVYGE 550 G C+W + P EE + R G + G+ P+YE C K++ + E Sbjct: 8 GGCFWCMVQPFEEQAGILSVRSGYTGGHLPNPSYEQVCAKTTGHTE 53
>MSRA_STRP3 (Q8K8E4) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)| (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) Length = 169 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 672 GACYWYIA*P*EE-----A*RXGASNGNPSEPAYEHHCCKSSVYGE 550 G C+W + P EE + R G + G+ P+YE C K++ + E Sbjct: 8 GGCFWCMVQPFEEQAGILSVRSGYTGGHLPNPSYEQVCAKTTGHTE 53
>MSRA_STRP1 (Q9A149) Peptide methionine sulfoxide reductase msrA (EC 1.8.4.6)| (Protein-methionine-S-oxide reductase) (Peptide Met(O) reductase) Length = 169 Score = 30.0 bits (66), Expect = 6.7 Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Frame = -3 Query: 672 GACYWYIA*P*EE-----A*RXGASNGNPSEPAYEHHCCKSSVYGE 550 G C+W + P EE + R G + G+ P+YE C K++ + E Sbjct: 8 GGCFWCMVQPFEEQAGILSVRSGYTGGHLPNPSYEQVCAKTTGHTE 53
>HISX_BACHK (Q6HLE7) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 429 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 5/44 (11%) Frame = -1 Query: 602 PVSQLMNIIAAKVAFMEKDGNAVPPRAAS-----LTSSQMAGVN 486 P S LMN++ AK+A ++K PPRA L ++ +AGV+ Sbjct: 136 PSSVLMNVLPAKLAGVKKIVMVTPPRAGGIDPHILVAASLAGVD 179
>HISX_BACCZ (Q63DX2) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 429 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 5/44 (11%) Frame = -1 Query: 602 PVSQLMNIIAAKVAFMEKDGNAVPPRAAS-----LTSSQMAGVN 486 P S LMN++ AK+A ++K PPRA L ++ +AGV+ Sbjct: 136 PSSVLMNVLPAKLAGVKKIVMVTPPRAGGIDPHILVAASLAGVD 179
>HISX_BACAN (Q81T62) Histidinol dehydrogenase (EC 1.1.1.23) (HDH)| Length = 429 Score = 30.0 bits (66), Expect = 6.7 Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 5/44 (11%) Frame = -1 Query: 602 PVSQLMNIIAAKVAFMEKDGNAVPPRAAS-----LTSSQMAGVN 486 P S LMN++ AK+A ++K PPRA L ++ +AGV+ Sbjct: 136 PSSVLMNVLPAKLAGVKKIVMVTPPRAGGIDPHILVAASLAGVD 179 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,738,352 Number of Sequences: 219361 Number of extensions: 1424023 Number of successful extensions: 3473 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 3359 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3473 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6655306086 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
