ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22i20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_470484.1| Oryza sativa (japonica cultivar-group), mRNA 131 2e-27
2dbj|AK098951.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3dbj|AK062137.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
4gb|AY104225.1| Zea mays PCO144800 mRNA sequence 92 2e-15
5gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 58 3e-05
6gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genom... 58 3e-05
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 58 3e-05
8ref|XM_507596.1| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.007
9ref|XM_483430.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
10ref|XM_507301.2| PREDICTED Oryza sativa (japonica cultivar-group... 50 0.007
11dbj|AK121104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
12dbj|AK104593.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
13dbj|AK070382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
14dbj|AK061736.1| Oryza sativa (japonica cultivar-group) cDNA clon... 50 0.007
15dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
16gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosom... 44 0.43
17dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
18dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
19ref|XM_481498.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
20gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.7
21dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
22ref|NM_179091.1| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.8
23ref|NM_179092.1| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.8
24ref|NM_118418.2| Arabidopsis thaliana unknown protein AT4G22890 ... 40 6.8
25gb|AC113600.19| Mus musculus chromosome 6, clone RP23-110A19, co... 40 6.8
26ref|XM_447516.1| Candida glabrata CBS138 hypothetical protein (C... 40 6.8
27gb|BT000905.1| Arabidopsis thaliana clone C105179 unknown protei... 40 6.8
28emb|AL391807.13| Human DNA sequence from clone RP3-525N10 on chr... 40 6.8
29emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20... 40 6.8
30gb|AY050904.1| Arabidopsis thaliana At4g22890 mRNA sequence 40 6.8
31emb|CR380955.1| Candida glabrata strain CBS138 chromosome I comp... 40 6.8
32emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, ... 40 6.8
33emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BA... 40 6.8
34emb|CR391969.13| Zebrafish DNA sequence from clone CH211-131C14 ... 40 6.8
35emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 i... 40 6.8
36gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosom... 40 6.8
37gb|AY088992.1| Arabidopsis thaliana clone 13264 mRNA, complete s... 40 6.8
38gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 6.8 
>ref|XM_470484.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1318

 Score =  131 bits (66), Expect = 2e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                       
Query: 359 caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctggaaactg 418
           |||||| ||||||||||| |||||  ||||||| ||||| || || |||||||| | |||
Sbjct: 823 caatattagaggcaaagcagcaaaccatgtgaaaatgaaaccgaaaggctctggcagctg 764

                                                                       
Query: 419 gaatacattgacctcaaagccagtcagctcatcaatgaagaagaacagtcctagagcaac 478
           |||||  |||| |||||||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 763 gaatatgttgatctcaaagccagtcaactcatcgatgaagaagaacagtcctagagcaag 704

                             
Query: 479 aatagtcgctggaacatt 496
           | |||| |||||||||||
Sbjct: 703 agtagttgctggaacatt 686



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 933 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 874

                     
Query: 309 aggattaaga 318
           ||||||||||
Sbjct: 873 aggattaaga 864
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>dbj|AK098951.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013052N16, full
           insert sequence
          Length = 1342

 Score =  131 bits (66), Expect = 2e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                       
Query: 359 caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctggaaactg 418
           |||||| ||||||||||| |||||  ||||||| ||||| || || |||||||| | |||
Sbjct: 847 caatattagaggcaaagcagcaaaccatgtgaaaatgaaaccgaaaggctctggcagctg 788

                                                                       
Query: 419 gaatacattgacctcaaagccagtcagctcatcaatgaagaagaacagtcctagagcaac 478
           |||||  |||| |||||||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 787 gaatatgttgatctcaaagccagtcaactcatcgatgaagaagaacagtcctagagcaag 728

                             
Query: 479 aatagtcgctggaacatt 496
           | |||| |||||||||||
Sbjct: 727 agtagttgctggaacatt 710



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 957 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 898

                     
Query: 309 aggattaaga 318
           ||||||||||
Sbjct: 897 aggattaaga 888
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>dbj|AK062137.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-F08, full
           insert sequence
          Length = 1358

 Score =  131 bits (66), Expect = 2e-27
 Identities = 120/138 (86%)
 Strand = Plus / Minus

                                                                       
Query: 359 caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctggaaactg 418
           |||||| ||||||||||| |||||  ||||||| ||||| || || |||||||| | |||
Sbjct: 844 caatattagaggcaaagcagcaaaccatgtgaagatgaaaccgaaaggctctggcagctg 785

                                                                       
Query: 419 gaatacattgacctcaaagccagtcagctcatcaatgaagaagaacagtcctagagcaac 478
           |||||  |||| |||||||||||||| |||||| ||||||||||||||||||||||||| 
Sbjct: 784 gaatatgttgatctcaaagccagtcaactcatcgatgaagaagaacagtcctagagcaag 725

                             
Query: 479 aatagtcgctggaacatt 496
           | |||| |||||||||||
Sbjct: 724 agtagttgctggaacatt 707



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 60/70 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
           ||||| || |||||| |||||||||| |||||||  || ||||||||||| || ||||| 
Sbjct: 954 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggacatggccccttg 895

                     
Query: 309 aggattaaga 318
           ||||||||||
Sbjct: 894 aggattaaga 885
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>gb|AY104225.1| Zea mays PCO144800 mRNA sequence
          Length = 939

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 115/138 (83%)
 Strand = Plus / Minus

                                                                       
Query: 359 caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctggaaactg 418
           |||||| || |||||||| |||||  ||||||| ||||| || || |||||||| | |||
Sbjct: 361 caatattaggggcaaagcagcaaaccatgtgaaaatgaatccgaaaggctctggcagctg 302

                                                                       
Query: 419 gaatacattgacctcaaagccagtcagctcatcaatgaagaagaacagtcctagagcaac 478
           ||| ||||||| |||||| |||||||  ||||||||||| ||||||||||| ||||| ||
Sbjct: 301 gaacacattgatctcaaaaccagtcaattcatcaatgaaaaagaacagtcccagagctac 242

                             
Query: 479 aatagtcgctggaacatt 496
             | || |||||||||||
Sbjct: 241 ggtggtggctggaacatt 224



 Score = 83.8 bits (42), Expect = 5e-13
 Identities = 129/158 (81%)
 Strand = Plus / Minus

                                                                       
Query: 159 agtgtgatcagccgagtttttgagtcgtataccatcacggttttgcaatttgcgcacttc 218
           |||||||||| ||||| ||||||||| ||| ||| | ||||  |||||||||| || |||
Sbjct: 561 agtgtgatcacccgagattttgagtcatattccagctcggtactgcaatttgcacatttc 502

                                                                       
Query: 219 acgttgttcgtcgcaccgccgctctcgatcgacagtattgtcccgtagaaggaaagattt 278
           || ||||| || | |||||| ||   ||  |||||||| |||||  |||||||||| |||
Sbjct: 501 actttgtttgttgtaccgccactggagactgacagtatagtcccaaagaaggaaaggttt 442

                                                 
Query: 279 tcagtaccgcaattcggacaaggtcccttcaggattaa 316
           |||||||| ||||| ||||| || ||||| ||||||||
Sbjct: 441 tcagtaccacaattaggacatggccccttaaggattaa 404
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 416      ctggaatacattgacctcaaagccagtcagctcatcaatgaagaagaac 464
                ||||||||  |||| |||||||||||||| |||||| ||||||||||||
Sbjct: 35877604 ctggaatatgttgatctcaaagccagtcaactcatcgatgaagaagaac 35877652



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 463      acagtcctagagcaacaatagtcgctggaacatt 496
                ||||||||||||||| | |||| |||||||||||
Sbjct: 35877839 acagtcctagagcaagagtagttgctggaacatt 35877872



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 359      caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctgg 412
                |||||| ||||||||||| |||||  ||||||| ||||| || || ||||||||
Sbjct: 35877457 caatattagaggcaaagcagcaaaccatgtgaaaatgaaaccgaaaggctctgg 35877510



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 249      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 298
                ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 35877237 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 35877286
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>gb|AC096690.5| Oryza sativa chromosome 3 BAC OSJNBa0059G06 genomic sequence, complete
             sequence
          Length = 145115

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Minus

                                                              
Query: 416   ctggaatacattgacctcaaagccagtcagctcatcaatgaagaagaac 464
             ||||||||  |||| |||||||||||||| |||||| ||||||||||||
Sbjct: 83521 ctggaatatgttgatctcaaagccagtcaactcatcgatgaagaagaac 83473



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 249   gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 298
             ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 83888 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 83839



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 46/54 (85%)
 Strand = Plus / Minus

                                                                   
Query: 359   caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctgg 412
             |||||| ||||||||||| |||||  ||||||| ||||| || || ||||||||
Sbjct: 83668 caatattagaggcaaagcagcaaaccatgtgaaaatgaaaccgaaaggctctgg 83615



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                               
Query: 463   acagtcctagagcaacaatagtcgctggaacatt 496
             ||||||||||||||| | |||| |||||||||||
Sbjct: 83286 acagtcctagagcaagagtagttgctggaacatt 83253
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 44/49 (89%)
 Strand = Plus / Plus

                                                                 
Query: 416      ctggaatacattgacctcaaagccagtcagctcatcaatgaagaagaac 464
                ||||||||  |||| |||||||||||||| |||||| ||||||||||||
Sbjct: 35967734 ctggaatatgttgatctcaaagccagtcaactcatcgatgaagaagaac 35967782



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                  
Query: 463      acagtcctagagcaacaatagtcgctggaacatt 496
                ||||||||||||||| | |||| |||||||||||
Sbjct: 35967969 acagtcctagagcaagagtagttgctggaacatt 35968002



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 46/54 (85%)
 Strand = Plus / Plus

                                                                      
Query: 359      caatatcagaggcaaagcggcaaaatatgtgaatatgaagccaaagggctctgg 412
                |||||| ||||||||||| |||||  ||||||| ||||| || || ||||||||
Sbjct: 35967587 caatattagaggcaaagcagcaaaccatgtgaaaatgaaaccgaaaggctctgg 35967640



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                                  
Query: 249      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggaca 298
                ||||| || |||||| |||||||||| |||||||  || |||||||||||
Sbjct: 35967367 gacaggatagtcccgaagaaggaaaggttttcagcgccacaattcggaca 35967416
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>ref|XM_507596.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1191_A10.128 mRNA
          Length = 1442

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 309  a 309
            |
Sbjct: 988  a 988
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>ref|XM_483430.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1442

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 309  a 309
            |
Sbjct: 988  a 988
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>ref|XM_507301.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1191_A10.128 mRNA
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 309  a 309
            |
Sbjct: 988  a 988
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>dbj|AK121104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023069O17, full
            insert sequence
          Length = 3855

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 3490 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 3431

             
Query: 309  a 309
            |
Sbjct: 3430 a 3430
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>dbj|AK104593.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-308-B08, full
           insert sequence
          Length = 1378

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
           |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 984 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 925

            
Query: 309 a 309
           |
Sbjct: 924 a 924
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>dbj|AK070382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D06, full
            insert sequence
          Length = 1445

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                        
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 1048 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 989

             
Query: 309  a 309
            |
Sbjct: 988  a 988
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>dbj|AK061736.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-D09, full
           insert sequence
          Length = 1378

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 52/61 (85%)
 Strand = Plus / Minus

                                                                       
Query: 249 gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtcccttc 308
           |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||||
Sbjct: 984 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtcccttc 925

            
Query: 309 a 309
           |
Sbjct: 924 a 924
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                          
Query: 249      gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 306
                |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 26176707 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 26176650



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                 
Query: 249      gacagtattgtcccgtagaaggaaagattttca 281
                |||||||| |||||  |||||||||||||||||
Sbjct: 13094986 gacagtatagtcccaaagaaggaaagattttca 13095018
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>gb|AC157599.3| Mus musculus BAC clone RP23-138L13 from chromosome 17, complete
             sequence
          Length = 185556

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 12    tagatatctacagaaaatnatacta 36
             |||||||||||||||||| ||||||
Sbjct: 61260 tagatatctacagaaaattatacta 61236
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>dbj|AP003888.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1191_A10
          Length = 140643

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                        
Query: 249    gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 306
              |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 120638 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 120581
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>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
            clone:OJ1014_E06
          Length = 112241

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 49/58 (84%)
 Strand = Plus / Minus

                                                                      
Query: 249  gacagtattgtcccgtagaaggaaagattttcagtaccgcaattcggacaaggtccct 306
            |||||||| |||||  ||||||||||||||||| | || || ||||| || |||||||
Sbjct: 9632 gacagtatagtcccaaagaaggaaagattttcattgccacagttcgggcacggtccct 9575
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>ref|XM_481498.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 612

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                            
Query: 249 gacagtattgtcccgtagaaggaaagattttca 281
           |||||||| |||||  |||||||||||||||||
Sbjct: 500 gacagtatagtcccaaagaaggaaagattttca 468
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>gb|AY360387.2| Oryza sativa (japonica cultivar-group) chromosome 8 BAC OSJNBa0003M24,
             complete sequence
          Length = 150085

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                              
Query: 249   gacagtattgtcccgtagaaggaaagattttca 281
             |||||||| |||||  |||||||||||||||||
Sbjct: 88465 gacagtatagtcccaaagaaggaaagattttca 88433
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>dbj|AP006481.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone: B1100F03
          Length = 139217

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 249   gacagtattgtcccgtagaaggaaagattttca 281
             |||||||| |||||  |||||||||||||||||
Sbjct: 75506 gacagtatagtcccaaagaaggaaagattttca 75538
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>ref|NM_179091.1| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.2 mRNA, complete cds
          Length = 1092

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 740 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 697
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>ref|NM_179092.1| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.3 mRNA, complete cds
          Length = 1413

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 825 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 782
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>ref|NM_118418.2| Arabidopsis thaliana unknown protein AT4G22890 transcript variant
           AT4G22890.1 mRNA, complete cds
          Length = 1417

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 825 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 782
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>gb|AC113600.19| Mus musculus chromosome 6, clone RP23-110A19, complete sequence
          Length = 212705

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 31     atactacaacacagaagcag 50
              ||||||||||||||||||||
Sbjct: 140580 atactacaacacagaagcag 140561
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>ref|XM_447516.1| Candida glabrata CBS138 hypothetical protein (CAGL0I06116g) partial
           mRNA
          Length = 2043

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 450 tcaatgaagaagaacagtcc 469
           ||||||||||||||||||||
Sbjct: 329 tcaatgaagaagaacagtcc 348
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>gb|BT000905.1| Arabidopsis thaliana clone C105179 unknown protein (At4g22890)
           mRNA, complete cds
          Length = 1006

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 654 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 611
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>emb|AL391807.13| Human DNA sequence from clone RP3-525N10 on chromosome 6 Contains the
             5' end of the BAI3 gene for brain-specific angiogenesis
             inhibitor 3, a novel gene and a CpG island, complete
             sequence
          Length = 73228

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 381   aaatatgtgaatatgaagcc 400
             ||||||||||||||||||||
Sbjct: 57818 aaatatgtgaatatgaagcc 57799
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>emb|AL031053.1|HS267M20 Human DNA sequence from clone RP1-267M20 on chromosome Xq22.2-22.3,
             complete sequence
          Length = 167943

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 62    ttgcagacttgacaattcca 81
             ||||||||||||||||||||
Sbjct: 58135 ttgcagacttgacaattcca 58116
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>gb|AY050904.1| Arabidopsis thaliana At4g22890 mRNA sequence
          Length = 1327

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 718 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 675
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>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 450    tcaatgaagaagaacagtcc 469
              ||||||||||||||||||||
Sbjct: 582809 tcaatgaagaagaacagtcc 582828
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>emb|AL161558.2|ATCHRIV58 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 58
          Length = 193550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 463   acagtcctagagcaacaatagtcgctggaacattca 498
             ||||||| ||||||||||  || |||||||||||||
Sbjct: 50728 acagtccgagagcaacaacggttgctggaacattca 50693
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>emb|AL031018.1|ATF7H19 Arabidopsis thaliana DNA chromosome 4, BAC clone F7H19 (ESSA project)
          Length = 139316

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 32/36 (88%)
 Strand = Plus / Minus

                                                 
Query: 463   acagtcctagagcaacaatagtcgctggaacattca 498
             ||||||| ||||||||||  || |||||||||||||
Sbjct: 21641 acagtccgagagcaacaacggttgctggaacattca 21606
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>emb|CR391969.13| Zebrafish DNA sequence from clone CH211-131C14 in linkage group 5,
             complete sequence
          Length = 159249

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ctacaacacagaagcagcaa 53
             ||||||||||||||||||||
Sbjct: 84256 ctacaacacagaagcagcaa 84275
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>emb|BX936403.9| Zebrafish DNA sequence from clone CH211-281A24 in linkage group 5,
             complete sequence
          Length = 142908

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    ctacaacacagaagcagcaa 53
             ||||||||||||||||||||
Sbjct: 38017 ctacaacacagaagcagcaa 37998
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>gb|AC160128.2| Mus musculus BAC clone RP23-286G17 from chromosome 12, complete
             sequence
          Length = 202315

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 298   aaggtcccttcaggattaag 317
             ||||||||||||||||||||
Sbjct: 79288 aaggtcccttcaggattaag 79307
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>gb|AY088992.1| Arabidopsis thaliana clone 13264 mRNA, complete sequence
          Length = 1321

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 38/44 (86%)
 Strand = Plus / Minus

                                                       
Query: 455 gaagaagaacagtcctagagcaacaatagtcgctggaacattca 498
           |||||| || ||||| ||||||||||  || |||||||||||||
Sbjct: 823 gaagaaaaagagtccgagagcaacaacggttgctggaacattca 780
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 214    acttcacgttgttcgtcgca 233
              ||||||||||||||||||||
Sbjct: 701595 acttcacgttgttcgtcgca 701576


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,240,668
Number of Sequences: 3902068
Number of extensions: 4240668
Number of successful extensions: 102957
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102808
Number of HSP's gapped (non-prelim): 149
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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