ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22i13
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_549955.1| Oryza sativa (japonica cultivar-group), mRNA 385 e-103
2ref|XM_549956.1| Oryza sativa (japonica cultivar-group), mRNA 385 e-103
3dbj|AK100063.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
4dbj|AK071475.1| Oryza sativa (japonica cultivar-group) cDNA clon... 385 e-103
5gb|AY110229.1| Zea mays CL24135_2 mRNA sequence 125 2e-25
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
7dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
8dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
9dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
10dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.038
11dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
12dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
13dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
14dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
15dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.15
16ref|NM_105339.2| Arabidopsis thaliana AR401; S-adenosylmethionin... 44 0.59
17gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, compl... 44 0.59
18emb|AL596254.2| Human DNA sequence from clone RP11-252L24 on chr... 44 0.59
19emb|BX815165.1|CNS0ACS6 Arabidopsis thaliana Full-length cDNA Co... 44 0.59
20gb|BT005868.1| Arabidopsis thaliana At1g66680 gene, complete cds 44 0.59
21gb|AY087928.1| Arabidopsis thaliana clone 3969 mRNA, complete se... 44 0.59
22dbj|D88747.2| Arabidopsis thaliana mRNA for AR401, complete cds 44 0.59
23gb|AC169813.2| Rhesus Macaque BAC CH250-16M3 (Children's Hospit... 42 2.3
24gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, com... 42 2.3
25gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, comp... 42 2.3
26emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on ch... 42 2.3
27emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complet... 42 2.3
28gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, comple... 42 2.3
29gb|AF241308.1|AF241307S2 Ovis aries T cell receptor constant reg... 42 2.3
30gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosom... 42 2.3
31gb|AC010582.6|AC010582 Homo sapiens chromosome 14 clone CTD-2547... 42 2.3
32gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, com... 42 2.3
33emb|AL136040.5|CNS01DVV Human chromosome 14 DNA sequence BAC C-2... 42 2.3
34gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, comp... 42 2.3
35gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complet... 42 2.3
36gb|U66193.1|BNU66193 Brassica napus S locus-linked gene two (SLL... 42 2.3
37gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Canc... 40 9.2
38gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosom... 40 9.2
39gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Ho... 40 9.2
40ref|XM_655324.1| Aspergillus nidulans FGSC A4 hypothetical prote... 40 9.2
41gb|AC131792.4| Mus musculus BAC clone RP24-468O15 from chromosom... 40 9.2
42gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome... 40 9.2
43gb|AC083805.17| Homo sapiens 12 BAC RP11-620J15 (Roswell Park Ca... 40 9.2
44gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete... 40 9.2
45gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, com... 40 9.2
46emb|AL592223.5| Human DNA sequence from clone RP11-359P12 on chr... 40 9.2
47emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chro... 40 9.2
48emb|AL590732.7| Human DNA sequence from clone RP11-14I4 on chrom... 40 9.2
49emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chro... 40 9.2
50gb|AC022296.34| Homo sapiens 3 BAC RP11-91K8 (Roswell Park Cance... 40 9.2
51gb|AC116645.4| Homo sapiens BAC clone RP11-685C12 from 4, comple... 40 9.2
52gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, com... 40 9.2
53emb|AL683823.11| Mouse DNA sequence from clone RP23-128G10 on ch... 40 9.2
54dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
55gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosom... 40 9.2
56dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 9.2
57gb|AC104069.3| Homo sapiens BAC clone RP11-279B11 from 2, comple... 40 9.2
58gb|AC026765.22| Homo sapiens 12 BAC RP4-601P9 (Roswell Park Canc... 40 9.2
59dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
60dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
61dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.2
62emb|AL929167.10| Mouse DNA sequence from clone RP23-5F14 on chro... 40 9.2
63dbj|AK101491.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
64dbj|AK064341.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.2
65gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 9.2
66emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa... 40 9.2
67emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb... 40 9.2
68gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complet... 40 9.2
69gb|AC148014.3| Mus musculus BAC clone RP23-118N15 from 19, compl... 40 9.2
70gb|AC102896.9| Mus musculus chromosome 5, clone RP24-353A8, comp... 40 9.2
71emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chro... 40 9.2
72emb|AL929497.7| Mouse DNA sequence from clone RP23-341F15 on chr... 40 9.2
73gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Canc... 40 9.2 
>ref|XM_549955.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1309

 Score =  385 bits (194), Expect = e-103
 Identities = 449/534 (84%)
 Strand = Plus / Minus

                                                                        
Query: 131  gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
            |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 1056 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 997

                                                                        
Query: 191  gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
            ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 996  gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 937

                                                                        
Query: 251  tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
            |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 936  tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 877

                                                                        
Query: 311  gatcaccagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
            ||| |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 876  gatgaccagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 817

                                                                        
Query: 371  ctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcacaag 430
            ||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||||
Sbjct: 816  ctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcacaag 757

                                                                        
Query: 431  ttcaaatctcctctccaacttcgactccagaacatcatcaaccaggaaattaatgtgctc 490
            ||||||||||||||||||||| ||||| |  ||||||||||||| |||||||||||||||
Sbjct: 756  ttcaaatctcctctccaactttgactctaacacatcatcaaccaagaaattaatgtgctc 697

                                                                        
Query: 491  aaatccatcacgaattgcgaggtttcgagcaagctcaattgcggcttcactatagtcaat 550
            ||| |||||||| || || || || ||||||| |||||||||  ||||||| | ||| ||
Sbjct: 696  aaacccatcacggatagcaagattacgagcaacctcaattgcaccttcactgtggtcgat 637

                                                                        
Query: 551  gccagttagatcagaaaacccttgttttgcaagctgctgtaagagtcgtccgctcccggt 610
             ||||| |||||||| |||||||| ||||||||||| ||  ||||||| |||||||| ||
Sbjct: 636  cccagtcagatcagagaacccttgctttgcaagctgttgcgagagtcgaccgctcccagt 577

                                                                  
Query: 611  tcctatgtcaagtacgctgcagccggacaaatccttgctggaacataagttttt 664
            ||||||||| ||||| |||||||    |||||||||| ||||||||||||||||
Sbjct: 576  tcctatgtcgagtacactgcagctacgcaaatccttgttggaacataagttttt 523
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>ref|XM_549956.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1053

 Score =  385 bits (194), Expect = e-103
 Identities = 449/534 (84%)
 Strand = Plus / Minus

                                                                       
Query: 131 gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
           |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 850 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 791

                                                                       
Query: 191 gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
           ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 790 gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 731

                                                                       
Query: 251 tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
           |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 730 tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 671

                                                                       
Query: 311 gatcaccagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
           ||| |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 670 gatgaccagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 611

                                                                       
Query: 371 ctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcacaag 430
           ||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||||
Sbjct: 610 ctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcacaag 551

                                                                       
Query: 431 ttcaaatctcctctccaacttcgactccagaacatcatcaaccaggaaattaatgtgctc 490
           ||||||||||||||||||||| ||||| |  ||||||||||||| |||||||||||||||
Sbjct: 550 ttcaaatctcctctccaactttgactctaacacatcatcaaccaagaaattaatgtgctc 491

                                                                       
Query: 491 aaatccatcacgaattgcgaggtttcgagcaagctcaattgcggcttcactatagtcaat 550
           ||| |||||||| || || || || ||||||| |||||||||  ||||||| | ||| ||
Sbjct: 490 aaacccatcacggatagcaagattacgagcaacctcaattgcaccttcactgtggtcgat 431

                                                                       
Query: 551 gccagttagatcagaaaacccttgttttgcaagctgctgtaagagtcgtccgctcccggt 610
            ||||| |||||||| |||||||| ||||||||||| ||  ||||||| |||||||| ||
Sbjct: 430 cccagtcagatcagagaacccttgctttgcaagctgttgcgagagtcgaccgctcccagt 371

                                                                 
Query: 611 tcctatgtcaagtacgctgcagccggacaaatccttgctggaacataagttttt 664
           ||||||||| ||||| |||||||    |||||||||| ||||||||||||||||
Sbjct: 370 tcctatgtcgagtacactgcagctacgcaaatccttgttggaacataagttttt 317
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>dbj|AK100063.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013160I04, full
           insert sequence
          Length = 1054

 Score =  385 bits (194), Expect = e-103
 Identities = 449/534 (84%)
 Strand = Plus / Minus

                                                                       
Query: 131 gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
           |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 851 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 792

                                                                       
Query: 191 gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
           ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 791 gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 732

                                                                       
Query: 251 tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
           |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 731 tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 672

                                                                       
Query: 311 gatcaccagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
           ||| |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 671 gatgaccagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 612

                                                                       
Query: 371 ctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcacaag 430
           ||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||||
Sbjct: 611 ctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcacaag 552

                                                                       
Query: 431 ttcaaatctcctctccaacttcgactccagaacatcatcaaccaggaaattaatgtgctc 490
           ||||||||||||||||||||| ||||| |  ||||||||||||| |||||||||||||||
Sbjct: 551 ttcaaatctcctctccaactttgactctaacacatcatcaaccaagaaattaatgtgctc 492

                                                                       
Query: 491 aaatccatcacgaattgcgaggtttcgagcaagctcaattgcggcttcactatagtcaat 550
           ||| |||||||| || || || || ||||||| |||||||||  ||||||| | ||| ||
Sbjct: 491 aaacccatcacggatagcaagattacgagcaacctcaattgcaccttcactgtggtcgat 432

                                                                       
Query: 551 gccagttagatcagaaaacccttgttttgcaagctgctgtaagagtcgtccgctcccggt 610
            ||||| |||||||| |||||||| ||||||||||| ||  ||||||| |||||||| ||
Sbjct: 431 cccagtcagatcagagaacccttgctttgcaagctgttgcgagagtcgaccgctcccagt 372

                                                                 
Query: 611 tcctatgtcaagtacgctgcagccggacaaatccttgctggaacataagttttt 664
           ||||||||| ||||| |||||||    |||||||||| ||||||||||||||||
Sbjct: 371 tcctatgtcgagtacactgcagctacgcaaatccttgttggaacataagttttt 318
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>dbj|AK071475.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023091F21, full
            insert sequence
          Length = 1310

 Score =  385 bits (194), Expect = e-103
 Identities = 449/534 (84%)
 Strand = Plus / Minus

                                                                        
Query: 131  gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
            |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 1057 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 998

                                                                        
Query: 191  gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
            ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 997  gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 938

                                                                        
Query: 251  tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
            |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 937  tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 878

                                                                        
Query: 311  gatcaccagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
            ||| |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 877  gatgaccagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 818

                                                                        
Query: 371  ctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcacaag 430
            ||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||||
Sbjct: 817  ctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcacaag 758

                                                                        
Query: 431  ttcaaatctcctctccaacttcgactccagaacatcatcaaccaggaaattaatgtgctc 490
            ||||||||||||||||||||| ||||| |  ||||||||||||| |||||||||||||||
Sbjct: 757  ttcaaatctcctctccaactttgactctaacacatcatcaaccaagaaattaatgtgctc 698

                                                                        
Query: 491  aaatccatcacgaattgcgaggtttcgagcaagctcaattgcggcttcactatagtcaat 550
            ||| |||||||| || || || || ||||||| |||||||||  ||||||| | ||| ||
Sbjct: 697  aaacccatcacggatagcaagattacgagcaacctcaattgcaccttcactgtggtcgat 638

                                                                        
Query: 551  gccagttagatcagaaaacccttgttttgcaagctgctgtaagagtcgtccgctcccggt 610
             ||||| |||||||| |||||||| ||||||||||| ||  ||||||| |||||||| ||
Sbjct: 637  cccagtcagatcagagaacccttgctttgcaagctgttgcgagagtcgaccgctcccagt 578

                                                                  
Query: 611  tcctatgtcaagtacgctgcagccggacaaatccttgctggaacataagttttt 664
            ||||||||| ||||| |||||||    |||||||||| ||||||||||||||||
Sbjct: 577  tcctatgtcgagtacactgcagctacgcaaatccttgttggaacataagttttt 524
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>gb|AY110229.1| Zea mays CL24135_2 mRNA sequence
          Length = 807

 Score =  125 bits (63), Expect = 2e-25
 Identities = 87/95 (91%)
 Strand = Plus / Plus

                                                                       
Query: 379 gtccatcagggtggagccctattgcatccagagttccttcatccatcacaagttcaaatc 438
           |||||||||| |||||||| || ||||| ||||| ||||||||||| |||||||||||||
Sbjct: 514 gtccatcaggatggagcccaatcgcatcaagagtcccttcatccatgacaagttcaaatc 573

                                              
Query: 439 tcctctccaacttcgactccagaacatcatcaacc 473
           | ||||||||||||||||||| |||||||||||||
Sbjct: 574 ttctctccaacttcgactccaaaacatcatcaacc 608



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 51/56 (91%)
 Strand = Plus / Plus

                                                                   
Query: 258 ttgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgtgat 313
           ||||||||||| ||||||||||| | |||||||||||| |||||||| ||||||||
Sbjct: 81  ttgaagttctctacctcctgcaccaactcatccttggttctgctgcatgatgtgat 136



 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                   
Query: 315 accagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
           |||| ||| |||||| | |||||||||||| | || ||||||||||||||||||||
Sbjct: 362 accaatataccaccacgggaaaccaagctatcaacggactgccaatacatcattct 417
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                           
Query: 369     ctctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcaca 428
               ||||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||
Sbjct: 1184736 ctctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcaca 1184677

                                                            
Query: 429     agttcaaatctcctctccaacttcgactccagaacatcatcaacc 473
               ||||||||||||||||||||||| ||||| |  ||||||||||||
Sbjct: 1184676 agttcaaatctcctctccaactttgactctaacacatcatcaacc 1184632



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                           
Query: 568     acccttgttttgcaagctgctgtaagagtcgtccgctcccggttcctatgtcaagtacgc 627
               ||||||| ||||||||||| ||  ||||||| |||||||| ||||||||||| ||||| |
Sbjct: 1183718 acccttgctttgcaagctgttgcgagagtcgaccgctcccagttcctatgtcgagtacac 1183659

                                                    
Query: 628     tgcagccggacaaatccttgctggaacataagttttt 664
               ||||||    |||||||||| ||||||||||||||||
Sbjct: 1183658 tgcagctacgcaaatccttgttggaacataagttttt 1183622



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                           
Query: 471     accaggaaattaatgtgctcaaatccatcacgaattgcgaggtttcgagcaagctcaatt 530
               |||| |||||||||||||||||| |||||||| || || || || ||||||| |||||||
Sbjct: 1184394 accaagaaattaatgtgctcaaacccatcacggatagcaagattacgagcaacctcaatt 1184335

                                                       
Query: 531     gcggcttcactatagtcaatgccagttagatcagaaaacc 570
               ||  ||||||| | ||| || ||||| |||||||| ||||
Sbjct: 1184334 gcaccttcactgtggtcgatcccagtcagatcagagaacc 1184295



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                       
Query: 315     accagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
               |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 1184977 accagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 1184922



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 145/183 (79%)
 Strand = Plus / Minus

                                                                           
Query: 131     gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
               |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 1185446 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 1185387

                                                                           
Query: 191     gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
               ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 1185386 gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 1185327

                                                                           
Query: 251     tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
               |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 1185326 tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 1185267

                  
Query: 311     gat 313
               |||
Sbjct: 1185266 gat 1185264
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>dbj|AP002487.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0684C01
          Length = 78600

 Score =  121 bits (61), Expect = 3e-24
 Identities = 94/105 (89%)
 Strand = Plus / Minus

                                                                         
Query: 369   ctctttacaggtccatcagggtggagccctattgcatccagagttccttcatccatcaca 428
             ||||||||||||||||| ||||| | ||| || |  ||||||||||||||||||||||||
Sbjct: 39039 ctctttacaggtccatcggggtgcaacccaatcgtgtccagagttccttcatccatcaca 38980

                                                          
Query: 429   agttcaaatctcctctccaacttcgactccagaacatcatcaacc 473
             ||||||||||||||||||||||| ||||| |  ||||||||||||
Sbjct: 38979 agttcaaatctcctctccaactttgactctaacacatcatcaacc 38935



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 84/97 (86%)
 Strand = Plus / Minus

                                                                         
Query: 568   acccttgttttgcaagctgctgtaagagtcgtccgctcccggttcctatgtcaagtacgc 627
             ||||||| ||||||||||| ||  ||||||| |||||||| ||||||||||| ||||| |
Sbjct: 38021 acccttgctttgcaagctgttgcgagagtcgaccgctcccagttcctatgtcgagtacac 37962

                                                  
Query: 628   tgcagccggacaaatccttgctggaacataagttttt 664
             ||||||    |||||||||| ||||||||||||||||
Sbjct: 37961 tgcagctacgcaaatccttgttggaacataagttttt 37925



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 84/100 (84%)
 Strand = Plus / Minus

                                                                         
Query: 471   accaggaaattaatgtgctcaaatccatcacgaattgcgaggtttcgagcaagctcaatt 530
             |||| |||||||||||||||||| |||||||| || || || || ||||||| |||||||
Sbjct: 38697 accaagaaattaatgtgctcaaacccatcacggatagcaagattacgagcaacctcaatt 38638

                                                     
Query: 531   gcggcttcactatagtcaatgccagttagatcagaaaacc 570
             ||  ||||||| | ||| || ||||| |||||||| ||||
Sbjct: 38637 gcaccttcactgtggtcgatcccagtcagatcagagaacc 38598



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                     
Query: 315   accagtatgccaccaggagaaaccaagctagccactgactgccaatacatcattct 370
             |||||||||||||||||||||||||  |  || || ||||||||||||||||||||
Sbjct: 39280 accagtatgccaccaggagaaaccagccctgcaaccgactgccaatacatcattct 39225



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 145/183 (79%)
 Strand = Plus / Minus

                                                                         
Query: 131   gaaagcaacggtggcgatgcaaacaccatcgacgtttgggtaagcttgcacatggtcgag 190
             |||||||||||| | ||||||   || ||| ||| | ||||| | ||| |||||||||| 
Sbjct: 39749 gaaagcaacggtcgtgatgcaggaactatccacgatggggtacgtttggacatggtcgat 39690

                                                                         
Query: 191   gtacttgaacaccacagcatcgctggtcagcgctccttcagatagcgtggcgcccaactt 250
             ||||||||||||| ||| ||| |||| | |||| ||||| ||   | | || |  | |||
Sbjct: 39689 gtacttgaacaccgcagtatcactggcctgcgcaccttcggagcccatagcactgagctt 39630

                                                                         
Query: 251   tctctgattgaagttctccacctcctgcactagctcatccttggtcctgctgcaggatgt 310
             |||||| |||||| |||| |||||||| || | |||||||||||| ||||| || |||||
Sbjct: 39629 tctctggttgaagctctctacctcctggaccaactcatccttggttctgctacatgatgt 39570

                
Query: 311   gat 313
             |||
Sbjct: 39569 gat 39567
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9,
              complete sequence
          Length = 22696651

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 411    gttccttcatccatcacaagttcaaatctcctctccaact 450
              ||||||||| ||||||||||||||||| | || |||||||
Sbjct: 261426 gttccttcagccatcacaagttcaaattttctttccaact 261465



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 81       ggaacaagagagggaggatggata 104
                |||||||||||||||||| |||||
Sbjct: 12354770 ggaacaagagagggaggaaggata 12354793
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>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0414D03
          Length = 169823

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 411   gttccttcatccatcacaagttcaaatctcctctccaact 450
             ||||||||| ||||||||||||||||| | || |||||||
Sbjct: 10025 gttccttcagccatcacaagttcaaattttctttccaact 10064
to top
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBa0066B16
          Length = 190143

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                      
Query: 411    gttccttcatccatcacaagttcaaatctcctctccaact 450
              ||||||||| ||||||||||||||||| | || |||||||
Sbjct: 156924 gttccttcagccatcacaagttcaaattttctttccaact 156963
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 411      gttccttcatccatcacaagttcaaat 437
                ||||||||| |||||||||||||||||
Sbjct: 14153180 gttccttcagccatcacaagttcaaat 14153206
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                          
Query: 411     gttccttcatccatcacaagttcaaat 437
               ||||||||| |||||||||||||||||
Sbjct: 8612163 gttccttcagccatcacaagttcaaat 8612137



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 90      gagggaggatggatacatatacatatat 117
               |||||||| |||||||||||| ||||||
Sbjct: 3439403 gagggaggttggatacatatatatatat 3439430



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 90      gagggaggatggatacatatacatatat 117
               |||||||| |||||||||||| ||||||
Sbjct: 3434022 gagggaggttggatacatatatatatat 3434049
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>dbj|AP005493.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBa0078D03
          Length = 176593

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 411   gttccttcatccatcacaagttcaaat 437
             ||||||||| |||||||||||||||||
Sbjct: 57469 gttccttcagccatcacaagttcaaat 57495
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>dbj|AP005510.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBa0009N02
          Length = 121142

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 411   gttccttcatccatcacaagttcaaat 437
             ||||||||| |||||||||||||||||
Sbjct: 81486 gttccttcagccatcacaagttcaaat 81460
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>dbj|AP004875.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0463G12
          Length = 145403

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 411   gttccttcatccatcacaagttcaaat 437
             ||||||||| |||||||||||||||||
Sbjct: 19210 gttccttcagccatcacaagttcaaat 19184
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>ref|NM_105339.2| Arabidopsis thaliana AR401; S-adenosylmethionine-dependent
           methyltransferase AT1G66680 (AR401) mRNA, complete cds
          Length = 1421

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 306 gatgtgatcaccagtatgccaccaggagaaacca 339
           ||||||||||||| ||| |||||||||| |||||
Sbjct: 923 gatgtgatcaccaatattccaccaggagcaacca 890
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>gb|AC122310.2| Mus musculus BAC clone RP23-296E17 from 12, complete sequence
          Length = 186217

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 31    gaagaacagctgtcctggggta 52
             ||||||||||||||||||||||
Sbjct: 59186 gaagaacagctgtcctggggta 59207
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>emb|AL596254.2| Human DNA sequence from clone RP11-252L24 on chromosome 1 Contains part
             of the PLAC3 gene for placenta-specific 3 (PLAC3),
             complete sequence
          Length = 72207

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 457   ccagaacatcatcaaccaggaa 478
             ||||||||||||||||||||||
Sbjct: 44365 ccagaacatcatcaaccaggaa 44344
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>emb|BX815165.1|CNS0ACS6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS39ZG02 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1269

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 306 gatgtgatcaccagtatgccaccaggagaaacca 339
           ||||||||||||| ||| |||||||||| |||||
Sbjct: 907 gatgtgatcaccaatattccaccaggagcaacca 874
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>gb|BT005868.1| Arabidopsis thaliana At1g66680 gene, complete cds
          Length = 792

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 306 gatgtgatcaccagtatgccaccaggagaaacca 339
           ||||||||||||| ||| |||||||||| |||||
Sbjct: 551 gatgtgatcaccaatattccaccaggagcaacca 518
to top
>gb|AY087928.1| Arabidopsis thaliana clone 3969 mRNA, complete sequence
          Length = 1304

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 306 gatgtgatcaccagtatgccaccaggagaaacca 339
           ||||||||||||| ||| |||||||||| |||||
Sbjct: 921 gatgtgatcaccaatattccaccaggagcaacca 888
to top
>dbj|D88747.2| Arabidopsis thaliana mRNA for AR401, complete cds
          Length = 1245

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 306 gatgtgatcaccagtatgccaccaggagaaacca 339
           ||||||||||||| ||| |||||||||| |||||
Sbjct: 875 gatgtgatcaccaatattccaccaggagcaacca 842
to top
>gb|AC169813.2| Rhesus Macaque  BAC CH250-16M3 (Children's Hospital Oakland Research
              Institute Rhesus macaque Adult Male BAC Library) complete
              sequence
          Length = 168861

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 102    atacatatacatatatttcatgtat 126
              ||||||||||||||||| |||||||
Sbjct: 148819 atacatatacatatattacatgtat 148843
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>gb|AC117585.8| Mus musculus chromosome 5, clone RP23-155F13, complete sequence
          Length = 215745

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 103    tacatatacatatatttcatgtatg 127
              ||||||||||||||||| |||||||
Sbjct: 193301 tacatatacatatatttaatgtatg 193325
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>gb|AC159224.6| Mus musculus chromosome 8, clone RP24-180O7, complete sequence
          Length = 171002

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   atacatatacatatatttcat 122
             |||||||||||||||||||||
Sbjct: 51020 atacatatacatatatttcat 51040
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>emb|AL138694.18| Human DNA sequence from clone RP11-330C15 on chromosome 13q33.1-34
             Contains a pseudogene similar to part of host cell factor
             2 (HCF-2) and a CpG island, complete sequence
          Length = 157264

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 102   atacatatacatatatttcatgtat 126
             |||||||||||||||| ||||||||
Sbjct: 87569 atacatatacatatatatcatgtat 87545
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>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome
          Length = 153337

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 569  cccttgttttgcaagctgctgtaag 593
            ||||||||| |||||||||||||||
Sbjct: 7804 cccttgtttggcaagctgctgtaag 7828
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>gb|AC093831.3| Homo sapiens BAC clone RP11-401I19 from 4, complete sequence
          Length = 182116

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 106   atatacatatatttcatgtat 126
             |||||||||||||||||||||
Sbjct: 43463 atatacatatatttcatgtat 43443
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>gb|AF241308.1|AF241307S2 Ovis aries T cell receptor constant region Cgamma4, exons
          Length = 1988

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 102  atacatatacatatatttcatgtat 126
            |||||||||||||||| ||||||||
Sbjct: 1698 atacatatacatatatatcatgtat 1722
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>gb|AC154767.2| Mus musculus BAC clone RP23-105P19 from chromosome 13, complete
             sequence
          Length = 189362

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 103   tacatatacatatatttcatgtatg 127
             ||||||||||||||||| |||||||
Sbjct: 85574 tacatatacatatattttatgtatg 85550
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>gb|AC010582.6|AC010582 Homo sapiens chromosome 14 clone CTD-2547F10, complete sequence
          Length = 191549

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 86     aagagagggaggatggataca 106
              |||||||||||||||||||||
Sbjct: 153156 aagagagggaggatggataca 153136
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>gb|AC103387.11| Mus musculus chromosome 3, clone RP24-383D8, complete sequence
          Length = 157053

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 102    atacatatacatatatttcat 122
              |||||||||||||||||||||
Sbjct: 117123 atacatatacatatatttcat 117143
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>emb|AL136040.5|CNS01DVV Human chromosome 14 DNA sequence BAC C-2506P8 of library CalTech-D from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 199420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 86    aagagagggaggatggataca 106
             |||||||||||||||||||||
Sbjct: 46882 aagagagggaggatggataca 46902
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>gb|AC164412.9| Mus musculus chromosome 3, clone RP24-360M7, complete sequence
          Length = 172583

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 102   atacatatacatatatttcat 122
             |||||||||||||||||||||
Sbjct: 26148 atacatatacatatatttcat 26168
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>gb|AC104098.5| Mus musculus BAC clone RP24-372H3 from 5, complete sequence
          Length = 180886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 103   tacatatacatatatttcatgtatg 127
             ||||||||||||||||| |||||||
Sbjct: 11069 tacatatacatatatttaatgtatg 11093
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>gb|U66193.1|BNU66193 Brassica napus S locus-linked gene two (SLL2) mRNA, complete cds
          Length = 1183

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 66/81 (81%)
 Strand = Plus / Minus

                                                                       
Query: 347 cactgactgccaatacatcattctctttacaggtccatcagggtggagccctattgcatc 406
           |||||| | ||||||||| | ||| || ||||| ||||||||||| |  || || |||||
Sbjct: 765 cactgaatcccaatacatgactcttttgacagggccatcagggtgcaaaccaatggcatc 706

                                
Query: 407 cagagttccttcatccatcac 427
           || ||||||||  ||||||||
Sbjct: 705 caaagttcctttgtccatcac 685
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>gb|AC153630.1| Mus musculus 6 BAC RP23-289O16 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 217496

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 39    gctgtcctggggtacattgt 58
             ||||||||||||||||||||
Sbjct: 59522 gctgtcctggggtacattgt 59503
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>gb|AC170187.2| Mus musculus BAC clone RP23-320B10 from chromosome 19, complete
             sequence
          Length = 192550

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gaacaagagagggaggatgg 101
             ||||||||||||||||||||
Sbjct: 30336 gaacaagagagggaggatgg 30355
to top
>gb|AC098294.6| Rattus norvegicus 8 BAC CH230-1L23 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 150308

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    ttggtcctgctgcaggatgt 310
              ||||||||||||||||||||
Sbjct: 101459 ttggtcctgctgcaggatgt 101478
to top
>ref|XM_655324.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2812.2), mRNA
          Length = 3567

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  aatctcctctccaacttcga 454
            ||||||||||||||||||||
Sbjct: 2458 aatctcctctccaacttcga 2477
to top
>gb|AC131792.4| Mus musculus BAC clone RP24-468O15 from chromosome 19, complete
             sequence
          Length = 162238

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 82    gaacaagagagggaggatgg 101
             ||||||||||||||||||||
Sbjct: 52924 gaacaagagagggaggatgg 52905
to top
>gb|AC130205.3| Mus musculus BAC clone RP24-430C1 from chromosome 1, complete sequence
          Length = 165927

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tatacatatatttcatgtat 126
              ||||||||||||||||||||
Sbjct: 137267 tatacatatatttcatgtat 137248
to top
>gb|AC083805.17| Homo sapiens 12 BAC RP11-620J15 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 104816

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 94   gaggatggatacatatacatatat 117
            ||||||||||| ||||||||||||
Sbjct: 7246 gaggatggatatatatacatatat 7223
to top
>gb|AC095039.3| Homo sapiens BAC clone RP11-12G8 from 7, complete sequence
          Length = 70416

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 102   atacatatacatatatttcatgta 125
             ||||||||||||||||| ||||||
Sbjct: 27647 atacatatacatatattacatgta 27670
to top
>gb|AC111137.10| Mus musculus chromosome 5, clone RP23-357C4, complete sequence
          Length = 197271

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tatacatatatttcatgtat 126
              ||||||||||||||||||||
Sbjct: 104194 tatacatatatttcatgtat 104175
to top
>emb|AL592223.5| Human DNA sequence from clone RP11-359P12 on chromosome 1, complete
             sequence
          Length = 76681

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    atggatacatatacatatat 117
             ||||||||||||||||||||
Sbjct: 69816 atggatacatatacatatat 69797
to top
>emb|AL591378.2| Human DNA sequence from clone RP11-64P15 on chromosome X Contains the
             5' end of a novel gene and a CpG island, complete sequence
          Length = 166016

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    gatggatacatatacatata 116
             ||||||||||||||||||||
Sbjct: 91346 gatggatacatatacatata 91327
to top
>emb|AL590732.7| Human DNA sequence from clone RP11-14I4 on chromosome 6 Contains the 5'
             end of a novel gene and a nucleophosmin (NPM1) pseudogene,
             complete sequence
          Length = 71092

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   atacatatacatatatttca 121
             ||||||||||||||||||||
Sbjct: 63159 atacatatacatatatttca 63178
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>emb|AL158069.16| Human DNA sequence from clone RP13-57D9 on chromosome Xq11.2-13.2
             Contains the gene for TED protein (TED),  the 5' end of
             the ED1 gene for ectodermal dysplasia 1, anhidrotic, two
             novel genes and three CpG islands, complete sequence
          Length = 186538

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 266   ctccacctcctgcactagct 285
             ||||||||||||||||||||
Sbjct: 51226 ctccacctcctgcactagct 51207
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>gb|AC022296.34| Homo sapiens 3 BAC RP11-91K8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 153650

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    atacatatacatatatttca 121
              ||||||||||||||||||||
Sbjct: 107622 atacatatacatatatttca 107641
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>gb|AC116645.4| Homo sapiens BAC clone RP11-685C12 from 4, complete sequence
          Length = 155761

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 98    atggatacatatacatatat 117
             ||||||||||||||||||||
Sbjct: 55668 atggatacatatacatatat 55687
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>gb|AC090660.3| Homo sapiens chromosome 18, clone RP11-869O1, complete sequence
          Length = 195156

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 106    atatacatatatttcatgta 125
              ||||||||||||||||||||
Sbjct: 149550 atatacatatatttcatgta 149531
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>emb|AL683823.11| Mouse DNA sequence from clone RP23-128G10 on chromosome 3, complete
              sequence
          Length = 180483

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 82     gaacaagagagggaggatgg 101
              ||||||||||||||||||||
Sbjct: 177127 gaacaagagagggaggatgg 177108
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 90       gagggaggatggatacatatacatatat 117
                |||||||| |||||||||||| ||||||
Sbjct: 11046761 gagggaggttggatacatatatatatat 11046734
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>gb|AC151984.3| Mus musculus BAC clone RP23-388K15 from chromosome 10, complete
             sequence
          Length = 201867

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    gaacaagagagggaggatgg 101
             ||||||||||||||||||||
Sbjct: 70784 gaacaagagagggaggatgg 70803
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 456     tccagaacatcatcaaccag 475
               ||||||||||||||||||||
Sbjct: 1227844 tccagaacatcatcaaccag 1227825
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>gb|AC104069.3| Homo sapiens BAC clone RP11-279B11 from 2, complete sequence
          Length = 155106

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   atacatatacatatatttca 121
             ||||||||||||||||||||
Sbjct: 21597 atacatatacatatatttca 21578
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>gb|AC026765.22| Homo sapiens 12 BAC RP4-601P9 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 129225

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 314   caccagtatgccaccaggagaaac 337
             |||||||||||||| |||||||||
Sbjct: 27629 caccagtatgccacaaggagaaac 27652
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>dbj|AP005872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1168F12
          Length = 141524

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 81     ggaacaagagagggaggatggata 104
              |||||||||||||||||| |||||
Sbjct: 138324 ggaacaagagagggaggaaggata 138347
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>dbj|AP004093.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1661_C12
          Length = 122214

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 90    gagggaggatggatacatatacatatat 117
             |||||||| |||||||||||| ||||||
Sbjct: 52226 gagggaggttggatacatatatatatat 52253



 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 90    gagggaggatggatacatatacatatat 117
             |||||||| |||||||||||| ||||||
Sbjct: 46845 gagggaggttggatacatatatatatat 46872
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>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0599F09
          Length = 157415

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 81    ggaacaagagagggaggatggata 104
             |||||||||||||||||| |||||
Sbjct: 20354 ggaacaagagagggaggaaggata 20377
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>emb|AL929167.10| Mouse DNA sequence from clone RP23-5F14 on chromosome 2, complete
             sequence
          Length = 148751

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   atacatatacatatatttca 121
             ||||||||||||||||||||
Sbjct: 84443 atacatatacatatatttca 84462
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>dbj|AK101491.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042L23, full
           insert sequence
          Length = 1607

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  ggaacaagagagggaggatggata 104
           |||||||||||||||||| |||||
Sbjct: 394 ggaacaagagagggaggaaggata 417
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>dbj|AK064341.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-H04, full
           insert sequence
          Length = 1632

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 81  ggaacaagagagggaggatggata 104
           |||||||||||||||||| |||||
Sbjct: 419 ggaacaagagagggaggaaggata 442
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 90       gagggaggatggatacatatacatatat 117
                |||||||| |||||||||||| ||||||
Sbjct: 11046459 gagggaggttggatacatatatatatat 11046432
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>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 157771

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 90     gagggaggatggatacatatacatatat 117
              |||||||| |||||||||||| ||||||
Sbjct: 139415 gagggaggttggatacatatatatatat 139442
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>emb|AL844875.4|CNS08CAY Oryza sativa chromosome 12, . BAC OSJNBb0032I14 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 134082

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 90    gagggaggatggatacatatacatatat 117
             |||||||| |||||||||||| ||||||
Sbjct: 58814 gagggaggttggatacatatatatatat 58841
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>gb|AC132465.3| Mus musculus BAC clone RP23-58D1 from 10, complete sequence
          Length = 218313

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     gaacaagagagggaggatgg 101
              ||||||||||||||||||||
Sbjct: 185439 gaacaagagagggaggatgg 185458
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>gb|AC148014.3| Mus musculus BAC clone RP23-118N15 from 19, complete sequence
          Length = 222061

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 82     gaacaagagagggaggatgg 101
              ||||||||||||||||||||
Sbjct: 202501 gaacaagagagggaggatgg 202520
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>gb|AC102896.9| Mus musculus chromosome 5, clone RP24-353A8, complete sequence
          Length = 156422

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 265   tctccacctcctgcactagc 284
             ||||||||||||||||||||
Sbjct: 59502 tctccacctcctgcactagc 59521
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>emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chromosome 2, complete
            sequence
          Length = 136064

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 98   atggatacatatacatatat 117
            ||||||||||||||||||||
Sbjct: 6382 atggatacatatacatatat 6363
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>emb|AL929497.7| Mouse DNA sequence from clone RP23-341F15 on chromosome 4, complete
             sequence
          Length = 38346

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 103   tacatatacatatatttcatgtat 126
             ||||||| ||||||||||||||||
Sbjct: 29750 tacatattcatatatttcatgtat 29727
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>gb|AC153867.3| Mus musculus 6 BAC RP23-400K22 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse6 BAC Library) complete sequence
          Length = 196838

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 39     gctgtcctggggtacattgt 58
              ||||||||||||||||||||
Sbjct: 113214 gctgtcctggggtacattgt 113195


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,119,089
Number of Sequences: 3902068
Number of extensions: 6119089
Number of successful extensions: 181218
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 180445
Number of HSP's gapped (non-prelim): 762
length of query: 670
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 647
effective length of database: 17,143,297,704
effective search space: 11091713614488
effective search space used: 11091713614488
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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