| Clone Name | rbags22i12 |
|---|---|
| Clone Library Name | barley_pub |
>DFRA_DIACA (P51104) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 360 Score = 60.1 bits (144), Expect(2) = 1e-12 Identities = 35/104 (33%), Positives = 50/104 (48%), Gaps = 1/104 (0%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ ++HI YE+P ANGRY D+ K++ E YPE+ VP K D Sbjct: 244 FVHLDDLCMSHIFLYENPKANGRYIASACAATIYDIAKMLREEYPEYNVPTKFKDYKEDM 303 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTSESSH 177 Q S K+ LG E L+ +ES + KG L H Sbjct: 304 GQVQFSSKKLTDLGFEFKYGLKDMYTAAVESCRAKGLLPLSLEH 347 Score = 32.3 bits (72), Expect(2) = 1e-12 Identities = 13/23 (56%), Positives = 18/23 (78%) Frame = -1 Query: 658 AEEAAWKFAKDNGLEIITINPTM 590 AE+AAWK+A +N LE I+I P + Sbjct: 186 AEQAAWKYAAENNLEFISIIPPL 208
>DFRA_VITVI (P51110) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 337 Score = 47.4 bits (111), Expect(2) = 3e-10 Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ AHI +E+P A GRY DL K++ E YPE+ +P + Sbjct: 228 FVHLDDLCNAHIYLFENPKAEGRYICSSHDCIILDLAKMLREKYPEYNIPTEFKGVDENL 287 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 S K+ LG E LE +++ + KG L Sbjct: 288 KSVCFSSKKLTDLGFEFKYSLEDMFTGAVDTCRAKGLL 325 Score = 37.0 bits (84), Expect(2) = 3e-10 Identities = 14/26 (53%), Positives = 21/26 (80%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+AAWK+AK+N ++ ITI PT+ Sbjct: 167 KTLAEQAAWKYAKENNIDFITIIPTL 192
>DFRA_CALCH (P51103) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 364 Score = 53.9 bits (128), Expect(2) = 2e-09 Identities = 32/98 (32%), Positives = 49/98 (50%), Gaps = 1/98 (1%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ HI YE+P A GRY ++ L ++I + +PE+ VP + A Sbjct: 229 YVHLDDLCECHIFLYENPEAKGRYICSKQDATIHQLARMIKQKWPEYHVPTQFAGIDEEL 288 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 S K+ +G + LE K I+S KEKGFL Sbjct: 289 PTVSFSSKKLIDMGFKFKYDLEDMFKGAIDSCKEKGFL 326 Score = 27.7 bits (60), Expect(2) = 2e-09 Identities = 12/28 (42%), Positives = 15/28 (53%) Frame = -2 Query: 588 VIGPLLQPTLNTSAEAILKFINGSSSTY 505 V+GP + PT S L ING+ S Y Sbjct: 194 VVGPFINPTFPPSLITALSLINGAESHY 221
>DFRA_ARATH (P51102) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) (TRANSPARENT TESTA 3 protein) Length = 382 Score = 47.0 bits (110), Expect(2) = 5e-09 Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 1/104 (0%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ AHI YE +A GRY + K + YPE+ VP Sbjct: 228 YVHLDDLCNAHIFLYEQAAAKGRYICSSHDATILTISKFLRPKYPEYNVPSTFEGVDENL 287 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFLTSESSH 177 + S K+ +G LE E+IE+ ++KGFL S+ Sbjct: 288 KSIEFSSKKLTDMGFNFKYSLEEMFIESIETCRQKGFLPVSLSY 331 Score = 33.1 bits (74), Expect(2) = 5e-09 Identities = 13/26 (50%), Positives = 20/26 (76%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+AAW FA++ GL+ I+I PT+ Sbjct: 167 KTLAEKAAWDFAEEKGLDFISIIPTL 192
>DFRA_GERHY (P51105) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 366 Score = 51.2 bits (121), Expect(2) = 2e-08 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 1/98 (1%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ HI YE+P A GRY L KII + +PE+ +P K Sbjct: 229 YVHLDDLCECHIYLYENPKAKGRYICSSHDATIHQLAKIIKDKWPEYYIPTKFPGIDEEL 288 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 I S K+ G E LE K I++ +EKG L Sbjct: 289 PIVSFSSKKLIDTGFEFKYNLEDMFKGAIDTCREKGLL 326 Score = 27.3 bits (59), Expect(2) = 2e-08 Identities = 11/26 (42%), Positives = 16/26 (61%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+AAW K N + I+I PT+ Sbjct: 168 KTLAEKAAWDATKGNNISFISIIPTL 193
>DFRA_PETHY (P14720) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 380 Score = 47.0 bits (110), Expect(2) = 3e-06 Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRY-CMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPF 309 +V++ D+ AHI YE P A+GR+ C I + D+ K++ E +PE+ VP + Sbjct: 238 YVHLDDLCEAHIFLYEHPKADGRFICSSHHAIIY-DVAKMVREKWPEYYVPTEFKGIDKD 296 Query: 308 ATIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 + S K+ +G + LE K I++ ++K L Sbjct: 297 LPVVSFSSKKLTDMGFQFKYTLEDMYKGAIDTCRQKQLL 335 Score = 23.9 bits (50), Expect(2) = 3e-06 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -2 Query: 588 VIGPLLQPTLNTSAEAILKFINGSSSTY 505 V+GP + PT S L I G+ + Y Sbjct: 203 VVGPFITPTFPPSLITALSLITGNEAHY 230
>DFRA_ANTMA (P14721) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 446 Score = 47.8 bits (112), Expect(2) = 3e-06 Identities = 28/98 (28%), Positives = 47/98 (47%), Gaps = 1/98 (1%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFA 306 +V++ D+ HI +E P A GRY D+ K+I E +PE+ +PD+ Sbjct: 240 YVHLDDLCEGHIFLFEYPKAEGRYICSSHDATIYDIAKLITENWPEYHIPDEFEGIDKDI 299 Query: 305 TIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 + S K+ +G LE ++ I++ +EKG L Sbjct: 300 PVVSFSSKKMIGMGFIFKYTLEDMVRGAIDTCREKGML 337 Score = 22.7 bits (47), Expect(2) = 3e-06 Identities = 10/28 (35%), Positives = 14/28 (50%) Frame = -2 Query: 588 VIGPLLQPTLNTSAEAILKFINGSSSTY 505 V+GP + PT S L I G+ + Y Sbjct: 205 VVGPFIMPTFPPSLITALSPITGNEAHY 232
>DFRA_MAIZE (P51108) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 357 Score = 40.8 bits (94), Expect(2) = 8e-06 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%) Frame = -3 Query: 482 VNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFAT 303 +++ D+ A I +E+P+A GRY + L ++ + YPE+ VP + Sbjct: 234 IHLDDLCDAEIFLFENPAAAGRYVCSSHDVTIHGLAAMLRDRYPEYDVPQRFPGIQDDLQ 293 Query: 302 IYQVSKDKIRSLG--MELIPLETSLKETIESLKEKGFL 195 + S K++ LG LE I + +EKG + Sbjct: 294 PVRFSSKKLQDLGFTFRYKTLEDMFDAAIRTCQEKGLI 331 Score = 28.5 bits (62), Expect(2) = 8e-06 Identities = 11/26 (42%), Positives = 20/26 (76%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+AA +A ++GL+++TI PT+ Sbjct: 172 KTLAEKAALAYAAEHGLDLVTIIPTL 197
>DFRA_HORVU (P51106) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 354 Score = 35.4 bits (80), Expect(2) = 1e-04 Identities = 23/97 (23%), Positives = 39/97 (40%), Gaps = 1/97 (1%) Frame = -3 Query: 482 VNVKDVALAHILAYEDPSANGRYCMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPFAT 303 V++ D+ A +E P ANGRY L +++ + +PE+ +P K A Sbjct: 229 VHLDDLCDAMTFLFEHPEANGRYICSSHDATIHGLARMLQDRFPEYDIPQKFAGVDDNLQ 288 Query: 302 IYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 S K+ G E I + ++KG + Sbjct: 289 PIHFSSKKLLDHGFSFRYTTEDMFDAAIHTCRDKGLI 325 Score = 30.0 bits (66), Expect(2) = 1e-04 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+AA ++A +NGL+ I+I PT+ Sbjct: 167 KALAEKAAMEYASENGLDFISIIPTL 192
>YGP7_YEAST (P53111) Hypothetical protein YGL157W| Length = 347 Score = 37.7 bits (86), Expect(2) = 1e-04 Identities = 17/52 (32%), Positives = 33/52 (63%), Gaps = 1/52 (1%) Frame = -3 Query: 500 NFCFGWVNVKDVALAHILAYEDPSANG-RYCMVERVIHHSDLVKIIHEMYPE 348 N+C +++V+DV+ AH++A E P G R + E + ++V I++E +P+ Sbjct: 238 NYCGPFIDVRDVSKAHLVAIEKPECTGQRLVLSEGLFCCQEIVDILNEEFPQ 289 Score = 27.7 bits (60), Expect(2) = 1e-04 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = -1 Query: 676 CYPRPFAEEAAWKFAKDN----GLEIITINP 596 C + FAE+ AW+F K+N + TINP Sbjct: 170 CGSKKFAEKTAWEFLKENKSSVKFTLSTINP 200
>DFRA_LYCES (P51107) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) Length = 379 Score = 42.7 bits (99), Expect = 0.001 Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 2/99 (2%) Frame = -3 Query: 485 WVNVKDVALAHILAYEDPSANGRY-CMVERVIHHSDLVKIIHEMYPEFPVPDKCADDAPF 309 +V++ D+ AHI YE P A GR+ C I + D+ K++ + +PE+ VP + Sbjct: 237 YVHLDDLCEAHIFLYEHPKAEGRFICSSHHAIIY-DVAKMVRQKWPEYYVPTEFKGIDKD 295 Query: 308 ATIYQVSKDKIRSLGMEL-IPLETSLKETIESLKEKGFL 195 + S K+ + + LE K IE+ ++K L Sbjct: 296 LALVSFSSKKLMDIKFQFKHTLEDMYKGAIETCRQKQLL 334
>YGD9_YEAST (P53183) Hypothetical protein YGL039W| Length = 348 Score = 34.3 bits (77), Expect(2) = 0.004 Identities = 16/52 (30%), Positives = 32/52 (61%), Gaps = 1/52 (1%) Frame = -3 Query: 500 NFCFGWVNVKDVALAHILAYEDPSANG-RYCMVERVIHHSDLVKIIHEMYPE 348 N+ +++V+DV+ AH+LA+E P G R + E + + + I++E +P+ Sbjct: 239 NYSGPFIDVRDVSKAHLLAFEKPECAGQRLFLCEDMFCSQEALDILNEEFPQ 290 Score = 25.8 bits (55), Expect(2) = 0.004 Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 4/31 (12%) Frame = -1 Query: 676 CYPRPFAEEAAWKFAKDNGLEI----ITINP 596 C + FAE+ AW F ++N I TINP Sbjct: 171 CGSKKFAEKTAWDFLEENQSSIKFTLSTINP 201
>DFRA_MEDSA (P51109) Dihydroflavonol-4-reductase (EC 1.1.1.219) (DFR)| (Dihydrokaempferol 4-reductase) (Fragment) Length = 217 Score = 32.3 bits (72), Expect(2) = 0.080 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = -1 Query: 667 RPFAEEAAWKFAKDNGLEIITINPTM 590 + AE+ AWKFAK++ +++ITI P + Sbjct: 150 KTLAEQEAWKFAKEHKMDVITIIPPL 175 Score = 23.1 bits (48), Expect(2) = 0.080 Identities = 11/28 (39%), Positives = 15/28 (53%) Frame = -2 Query: 588 VIGPLLQPTLNTSAEAILKFINGSSSTY 505 V+GP L PT+ S L I G+ + Y Sbjct: 176 VVGPFLIPTMPPSLITALSPITGNEAHY 203
>Y058_AQUAE (O66470) Hypothetical protein aq_058| Length = 116 Score = 34.3 bits (77), Expect = 0.37 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = -3 Query: 380 LVKIIHEMYPEFPVPDKCADDAPFATIYQVSKD 282 L KI+ E++ E P P+K D++ + T+Y V KD Sbjct: 46 LSKIVEEVFKEIPNPEKKLDESLYTTLYSVLKD 78
>YAB2_SCHPO (Q09804) Hypothetical protein C2G11.02 in chromosome I| Length = 1318 Score = 34.3 bits (77), Expect = 0.37 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +3 Query: 186 LRSQKSFLFQTLDSLLEARLQGNQLHAQTSYLVL*HLVDCGKRSVICTLVWHWKFRIHL 362 L +F + ++ LE + A+ S+L+L +VD GK ++ TL+ W +HL Sbjct: 589 LHEDTTFPMRVVNYALEYSSKALDKFAENSHLILLDMVDVGKPDLVLTLLCRWLHMVHL 647
>ATG27_ASHGO (Q757Z8) Autophagy-related protein 27 precursor| Length = 297 Score = 32.3 bits (72), Expect = 1.4 Identities = 18/52 (34%), Positives = 27/52 (51%) Frame = -3 Query: 344 PVPDKCADDAPFATIYQVSKDKIRSLGMELIPLETSLKETIESLKEKGFLTS 189 PVPDKC DDA F QV D + ++ + + + +E L++ GF S Sbjct: 66 PVPDKCKDDAMFCHRQQVKLDDGKEYVTQVFDVPRNQEVDVEELRD-GFQVS 116
>SYV_PSEPK (Q88P76) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 948 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%) Frame = -1 Query: 508 IRPISALDG*TLKMLPWHIS*HMKILQQTE-DIAWLKE 398 I P++ +DG T+ + PW ++ +I E DI WLKE Sbjct: 762 IAPLAGIDGKTIMLQPWPVANEARIDAAAEGDIEWLKE 799
>BGLS_RUMAL (P15885) Beta-glucosidase (EC 3.2.1.21) (Gentiobiase) (Cellobiase)| (Beta-D-glucoside glucohydrolase) Length = 947 Score = 31.6 bits (70), Expect = 2.4 Identities = 12/31 (38%), Positives = 20/31 (64%) Frame = +2 Query: 458 PGQHL*RLPIQSRNWPYVEDDPFINFNIASA 550 PG ++ R P+ RN+ Y +DPF+ +A+A Sbjct: 572 PGMNIHRHPLNGRNFEYFSEDPFLTGTMAAA 602
>BAN_ARATH (Q9SEV0) Leucoanthocyanidin reductase (EC 1.3.1.77) (LAR) (Protein| BANYULS) (Anthocyanin spotted testa) (ast) Length = 340 Score = 31.2 bits (69), Expect = 3.1 Identities = 12/30 (40%), Positives = 21/30 (70%), Gaps = 2/30 (6%) Frame = -1 Query: 673 YP--RPFAEEAAWKFAKDNGLEIITINPTM 590 YP + AE+ AW+FAK+N + ++T+ P + Sbjct: 169 YPISKVLAEKTAWEFAKENKINLVTVIPAL 198
>PMBA_BUCAP (Q8KA30) Protein pmbA homolog| Length = 447 Score = 30.8 bits (68), Expect = 4.1 Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 2/71 (2%) Frame = +1 Query: 157 KQRKFHRWLDSEVRNPFSFKLSIVSLRLVSRGISSMPRLLILS--FDTW*IVAKGASSAH 330 K+R F WL+ E NP K + S S G+S+ R +I + +TW + A Sbjct: 278 KKRIFPEWLNIE-ENPH-IKKGLGSKPFDSEGVSTTIRSIIKNGILETWLLNTYNARKLG 335 Query: 331 LSGTGNSGYIS 363 L+ TG+SG IS Sbjct: 336 LTTTGHSGGIS 346
>GRE2_YEAST (Q12068) NADPH-dependent methylglyoxal reductase GRE2 (EC| 1.1.1.283) (Genes de respuesta a estres protein 2) Length = 342 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/47 (31%), Positives = 30/47 (63%), Gaps = 1/47 (2%) Frame = -3 Query: 488 GWVNVKDVALAHILAYEDPSANGRYCMV-ERVIHHSDLVKIIHEMYP 351 G+++V+DVA AH++A++ G+ +V E D++ I++E +P Sbjct: 238 GYIDVRDVAKAHLVAFQKRETIGQRLIVSEARFTMQDVLDILNEDFP 284 Score = 30.0 bits (66), Expect = 6.9 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 4/34 (11%) Frame = -1 Query: 685 NGMCYPRPFAEEAAWKFAKDN----GLEIITINP 596 N C + FAE+AAW+F ++N E+ +NP Sbjct: 163 NAYCGSKKFAEKAAWEFLEENRDSVKFELTAVNP 196
>PO152_SCHPO (O94385) Probable nucleoporin POM152-like| Length = 1250 Score = 30.0 bits (66), Expect = 6.9 Identities = 15/63 (23%), Positives = 31/63 (49%) Frame = +1 Query: 88 TMPRFISGAHKHVRIQRLPLVMPKQRKFHRWLDSEVRNPFSFKLSIVSLRLVSRGISSMP 267 T+P++I +H + + LV R + L S +NP +L + L+ RG+ ++ Sbjct: 190 TIPKYIQYSHVDLETKEETLVEVSGRSLRKLLSSSSKNPKEPRLQTIYLKTNKRGLYTLK 249 Query: 268 RLL 276 ++ Sbjct: 250 HVV 252
>TLR1_MOUSE (Q9EPQ1) Toll-like receptor 1 precursor (Toll/interleukin-1| receptor-like protein) (TIL) (CD281 antigen) Length = 795 Score = 30.0 bits (66), Expect = 6.9 Identities = 17/53 (32%), Positives = 25/53 (47%) Frame = +1 Query: 118 KHVRIQRLPLVMPKQRKFHRWLDSEVRNPFSFKLSIVSLRLVSRGISSMPRLL 276 +HV + L +V P +R+F LD V +LS + L +G S R L Sbjct: 188 RHVSTETLHIVFPSKREFRFLLDVSVSTTIGLELSNIKCVLEDQGCSYFLRAL 240 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 106,310,501 Number of Sequences: 219361 Number of extensions: 2274132 Number of successful extensions: 5738 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 5534 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5737 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 6856295237 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)