ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22i06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY108552.1| Zea mays PCO091023 mRNA sequence 212 1e-51
2ref|XM_479734.1| Oryza sativa (japonica cultivar-group), mRNA 172 9e-40
3ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group... 172 9e-40
4dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 9e-40
5dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 9e-40
6dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
7dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
8ref|XM_463544.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
9dbj|AK072566.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
10gb|AY219234.1| Nicotiana tabacum arm repeat-containing protein m... 46 0.13
11gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complet... 46 0.13
12gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome... 44 0.53
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
14dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
15dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
16dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
17dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.53
18gb|AE000657.1| Aquifex aeolicus VF5, complete genome 44 0.53
19gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.53
20gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 44 0.53
21emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312... 44 0.53
22ref|NM_127878.2| Arabidopsis thaliana ubiquitin-protein ligase A... 42 2.1
23gb|AE010452.1| Methanopyrus kandleri AV19 section 151 of 157 of ... 42 2.1
24emb|AL589677.6| Human DNA sequence from clone RP11-12P4 on chrom... 42 2.1
25gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 ma... 42 2.1
26gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 ma... 42 2.1
27gb|U00034.1| Caenorhabditis elegans cosmid C06E8, complete sequence 40 8.3
28ref|NM_204735.1| Gallus gallus myosin VI (MYO6), mRNA 40 8.3
29gb|AF043696.1| Caenorhabditis elegans cosmid F07H8, complete seq... 40 8.3
30gb|AF025462.1| Caenorhabditis elegans cosmid K10F12, complete se... 40 8.3
31gb|AF067220.2| Caenorhabditis elegans cosmid C33E10, complete se... 40 8.3
32gb|U58735.2| Caenorhabditis elegans cosmid F20B4, complete sequence 40 8.3
33gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete... 40 8.3
34gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete se... 40 8.3
35emb|Z81028.1|CEB0365 Caenorhabditis elegans Cosmid B0365, comple... 40 8.3
36emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, comple... 40 8.3
37emb|Z73976.1|CET07C12 Caenorhabditis elegans Cosmid T07C12, comp... 40 8.3
38emb|Z68336.1|CEF22B3 Caenorhabditis elegans Cosmid F22B3, comple... 40 8.3
39emb|Z99277.1|CEY53C12A Caenorhabditis elegans YAC Y53C12A, compl... 40 8.3
40gb|AF039712.1| Caenorhabditis elegans cosmid F54D7, complete seq... 40 8.3
41gb|U41008.1| Caenorhabditis elegans cosmid F44E8, complete sequence 40 8.3
42gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosom... 40 8.3
43emb|CR847897.15| Zebrafish DNA sequence from clone DKEY-90L8 in ... 40 8.3
44emb|AJ278608.1|GGA278608 Gallus gallus mRNA for myosin VI (CMY6 ... 40 8.3
45gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 8.3
46gb|U40424.1| Caenorhabditis elegans cosmid C24A3, complete sequence 40 8.3
47dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 40 8.3
48gb|U41032.1| Caenorhabditis elegans cosmid B0302, complete sequence 40 8.3
49gb|AC084152.1| Caenorhabditis elegans cosmid Y102A11A, complete ... 40 8.3
50gb|AC092438.5| Homo sapiens BAC clone RP11-367M19 from 4, comple... 40 8.3
51gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete se... 40 8.3
52emb|CR385693.1| Gallus gallus finished cDNA, clone ChEST879l11 40 8.3
53ref|NM_078379.1| Caenorhabditis elegans B0302.3 (B0302.3) mRNA, ... 40 8.3
54gb|U40801.1| Caenorhabditis elegans cosmid F28E10, complete sequ... 40 8.3
55gb|AF054983.1|AF054983 Caenorhabditis elegans RTE-1 non-LTR retr... 40 8.3
56emb|AJ326931.1|HSA326931 Homo sapiens genomic sequence surroundi... 40 8.3
57emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, compl... 40 8.3
58emb|AL117193.2|CEY105C5A Caenorhabditis elegans YAC Y105C5A, com... 40 8.3
59gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45... 40 8.3
60gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 8.3
61emb|Z83114.1|CEK09B11 Caenorhabditis elegans Cosmid K09B11, comp... 40 8.3
62gb|AF025453.1| Caenorhabditis elegans cosmid C08F1, complete seq... 40 8.3
63gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complet... 40 8.3
64gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, compl... 40 8.3
65emb|Z83319.1|CET02D1 Caenorhabditis elegans Cosmid T02D1, comple... 40 8.3
66emb|Z79599.1|CEF47C8 Caenorhabditis elegans Cosmid F47C8, comple... 40 8.3
67gb|U41013.1| Caenorhabditis elegans cosmid T06C10, complete sequ... 40 8.3
68gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome 40 8.3
69emb|X54489.1|HSMGSAG Human gene for melanoma growth stimulatory ... 40 8.3 
>gb|AY108552.1| Zea mays PCO091023 mRNA sequence
          Length = 594

 Score =  212 bits (107), Expect = 1e-51
 Identities = 232/271 (85%), Gaps = 2/271 (0%)
 Strand = Plus / Minus

                                                                       
Query: 339 ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 398
           ||||| |||||||| |||||||| ||||| ||||| || || ||||| |||||||| |||
Sbjct: 492 ttcccatgtctttg-ctgcggaagtagctcagaagcgcttgtgccttctctcttgcccgc 434

                                                                       
Query: 399 ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 458
           ||||| ||||||||||| || ||||||||||||||||| ||||||||||| |||||||| 
Sbjct: 433 ggtgttcctgactgtgaaagggcgactagagggggcactgcaccctcttgaagaactata 374

                                                                       
Query: 459 ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 518
           ||||| ||||||||||||||||| || |||||||||||||| || ||||| || || |||
Sbjct: 373 ctgcaaaacctgttgctgtttgtacagagctgaagcaacgcagccgcagcattctccttc 314

                                                                       
Query: 519 ccccgcgctgaacccagctcgacgacttcgacgagggctgggataccacgggcctgcccg 578
           || |  || ||||||| ||| |||||||| || |||||||| || ||||| |||||||| 
Sbjct: 313 cctcttgcagaacccaactcaacgacttcaacaagggctggaatgccacgtgcctgccca 254

                                          
Query: 579 atcgcggtccttcctttctggtatcgtagca 609
           |||||  ||||||| |||||| |||||||||
Sbjct: 253 atcgcattccttcc-ttctggaatcgtagca 224
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>ref|XM_479734.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2952

 Score =  172 bits (87), Expect = 9e-40
 Identities = 226/271 (83%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 398
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2575 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2516

                                                                        
Query: 399  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 458
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2515 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2456

                                                                        
Query: 459  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 518
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2455 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2396

                                                                        
Query: 519  ccccgcgctgaacccagctcgacgacttcgacgagggctgggataccacgggcctgcccg 578
            ||||  |||||||| || || || ||||| || |||||||| |||||||| || || || 
Sbjct: 2395 ccccttgctgaaccgagttcaacaacttcaacaagggctggaataccacgcgcttgacca 2336

                                           
Query: 579  atcgcggtccttcctttctggtatcgtagca 609
            || || |||| ||| ||||||||| ||||||
Sbjct: 2335 attgctgtcc-tcccttctggtatggtagca 2306



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  tctcaatttgactataaacaa 221
            |||||||||||||||||||||
Sbjct: 2720 tctcaatttgactataaacaa 2700
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>ref|XM_507093.1| PREDICTED Oryza sativa (japonica cultivar-group), P0007D08.34 mRNA
          Length = 2953

 Score =  172 bits (87), Expect = 9e-40
 Identities = 226/271 (83%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 398
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2576 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2517

                                                                        
Query: 399  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 458
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2516 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2457

                                                                        
Query: 459  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 518
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2456 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2397

                                                                        
Query: 519  ccccgcgctgaacccagctcgacgacttcgacgagggctgggataccacgggcctgcccg 578
            ||||  |||||||| || || || ||||| || |||||||| |||||||| || || || 
Sbjct: 2396 ccccttgctgaaccgagttcaacaacttcaacaagggctggaataccacgcgcttgacca 2337

                                           
Query: 579  atcgcggtccttcctttctggtatcgtagca 609
            || || |||| ||| ||||||||| ||||||
Sbjct: 2336 attgctgtcc-tcccttctggtatggtagca 2307



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  tctcaatttgactataaacaa 221
            |||||||||||||||||||||
Sbjct: 2721 tctcaatttgactataaacaa 2701
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>dbj|AK106557.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-109-A01, full
            insert sequence
          Length = 2952

 Score =  172 bits (87), Expect = 9e-40
 Identities = 226/271 (83%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 398
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2575 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2516

                                                                        
Query: 399  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 458
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2515 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2456

                                                                        
Query: 459  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 518
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2455 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2396

                                                                        
Query: 519  ccccgcgctgaacccagctcgacgacttcgacgagggctgggataccacgggcctgcccg 578
            ||||  |||||||| || || || ||||| || |||||||| |||||||| || || || 
Sbjct: 2395 ccccttgctgaaccgagttcaacaacttcaacaagggctggaataccacgcgcttgacca 2336

                                           
Query: 579  atcgcggtccttcctttctggtatcgtagca 609
            || || |||| ||| ||||||||| ||||||
Sbjct: 2335 attgctgtcc-tcccttctggtatggtagca 2306



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  tctcaatttgactataaacaa 221
            |||||||||||||||||||||
Sbjct: 2720 tctcaatttgactataaacaa 2700
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>dbj|AK102080.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082K05, full
            insert sequence
          Length = 2953

 Score =  172 bits (87), Expect = 9e-40
 Identities = 226/271 (83%), Gaps = 1/271 (0%)
 Strand = Plus / Minus

                                                                        
Query: 339  ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgccttttctcttgctcgc 398
            |||||||| ||||||||||| || ||||| ||||||||||| ||||| |||||||| || 
Sbjct: 2576 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgccttctctcttgcccgt 2517

                                                                        
Query: 399  ggtgtccctgactgtgacagcgcgactagagggggcacggcaccctcttggagaactatg 458
            || || |||||||||||||  || |||||||| ||||| ||||||||||| |||||||| 
Sbjct: 2516 ggcgtgcctgactgtgacaatgcaactagaggaggcacagcaccctcttgaagaactata 2457

                                                                        
Query: 459  ctgcagaacctgttgctgtttgtgcatagctgaagcaacgccgcggcagcgttttctttc 518
            ||||| || ||| |||||||||| |||||||||||||| || || || || ||||| |||
Sbjct: 2456 ctgcaaaatctgctgctgtttgtacatagctgaagcaatgctgcagccgcattttccttc 2397

                                                                        
Query: 519  ccccgcgctgaacccagctcgacgacttcgacgagggctgggataccacgggcctgcccg 578
            ||||  |||||||| || || || ||||| || |||||||| |||||||| || || || 
Sbjct: 2396 ccccttgctgaaccgagttcaacaacttcaacaagggctggaataccacgcgcttgacca 2337

                                           
Query: 579  atcgcggtccttcctttctggtatcgtagca 609
            || || |||| ||| ||||||||| ||||||
Sbjct: 2336 attgctgtcc-tcccttctggtatggtagca 2307



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 201  tctcaatttgactataaacaa 221
            |||||||||||||||||||||
Sbjct: 2721 tctcaatttgactataaacaa 2701
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score =  127 bits (64), Expect = 5e-26
 Identities = 188/228 (82%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                          
Query: 382    ccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggcac 441
              |||| |||||||| || || || |||||||||||||  || |||||||| ||||| ||||
Sbjct: 550033 ccttctctcttgcccgtggcgtgcctgactgtgacaatgcaactagaggaggcacagcac 549974

                                                                          
Query: 442    cctcttggagaactatgctgcagaacctgttgctgtttgtgcatagctgaagcaacgccg 501
              ||||||| |||||||| ||||| || ||| |||||||||| |||||||||||||| || |
Sbjct: 549973 cctcttgaagaactatactgcaaaatctgctgctgtttgtacatagctgaagcaatgctg 549914

                                                                          
Query: 502    cggcagcgttttctttcccccgcgctgaacccagctcgacgacttcgacgagggctggga 561
              | || || ||||| |||||||  |||||||| || || || ||||| || |||||||| |
Sbjct: 549913 cagccgcattttccttcccccttgctgaaccgagttcaacaacttcaacaagggctggaa 549854

                                                              
Query: 562    taccacgggcctgcccgatcgcggtccttcctttctggtatcgtagca 609
              ||||||| || || || || || |||| ||| ||||||||| ||||||
Sbjct: 549853 taccacgcgcttgaccaattgctgtcc-tcccttctggtatggtagca 549807



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 339    ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgcct 384
              |||||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 550197 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgcct 550152



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 13762753 ctcgacgacttcgacgagggct 13762774



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    tctcaatttgactataaacaa 221
              |||||||||||||||||||||
Sbjct: 550342 tctcaatttgactataaacaa 550322
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>dbj|AP004584.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0007D08
          Length = 183142

 Score =  127 bits (64), Expect = 5e-26
 Identities = 188/228 (82%), Gaps = 1/228 (0%)
 Strand = Plus / Minus

                                                                          
Query: 382    ccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggcac 441
              |||| |||||||| || || || |||||||||||||  || |||||||| ||||| ||||
Sbjct: 139993 ccttctctcttgcccgtggcgtgcctgactgtgacaatgcaactagaggaggcacagcac 139934

                                                                          
Query: 442    cctcttggagaactatgctgcagaacctgttgctgtttgtgcatagctgaagcaacgccg 501
              ||||||| |||||||| ||||| || ||| |||||||||| |||||||||||||| || |
Sbjct: 139933 cctcttgaagaactatactgcaaaatctgctgctgtttgtacatagctgaagcaatgctg 139874

                                                                          
Query: 502    cggcagcgttttctttcccccgcgctgaacccagctcgacgacttcgacgagggctggga 561
              | || || ||||| |||||||  |||||||| || || || ||||| || |||||||| |
Sbjct: 139873 cagccgcattttccttcccccttgctgaaccgagttcaacaacttcaacaagggctggaa 139814

                                                              
Query: 562    taccacgggcctgcccgatcgcggtccttcctttctggtatcgtagca 609
              ||||||| || || || || || |||| ||| ||||||||| ||||||
Sbjct: 139813 taccacgcgcttgaccaattgctgtcc-tcccttctggtatggtagca 139767



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                            
Query: 339    ttcccgtgtctttggctgcggaaatagctaagaagagcctgcgcct 384
              |||||||| ||||||||||| || ||||| ||||||||||| ||||
Sbjct: 140157 ttcccgtgcctttggctgcgaaagtagctgagaagagcctgtgcct 140112



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 201    tctcaatttgactataaacaa 221
              |||||||||||||||||||||
Sbjct: 140302 tctcaatttgactataaacaa 140282
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>ref|XM_463544.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2370

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  tgcggaaatagctaagaagagcctgcgccttttctcttgctcgcggtgtccctgactgtg 414
            |||| |||||||| |||||| |||| ||||| |||||||| || | ||| ||||| || |
Sbjct: 2305 tgcgaaaatagcttagaagaacctgagccttctctcttgcacgggctgtgcctgattgcg 2246

                                                                        
Query: 415  acagcgcgactagagggggcacggcaccctcttggagaactatgctgcagaacctgttgc 474
            |||  || || | ||| |||||| | || ||||| ||||| | | |||| |||||||| |
Sbjct: 2245 acaatgcaaccaaaggtggcacgacgccttcttgaagaaccagggtgcaaaacctgttac 2186

                      
Query: 475  tgtttgtgca 484
            ||||||||||
Sbjct: 2185 tgtttgtgca 2176
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>dbj|AK072566.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023134O09, full
            insert sequence
          Length = 2725

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 104/130 (80%)
 Strand = Plus / Minus

                                                                        
Query: 355  tgcggaaatagctaagaagagcctgcgccttttctcttgctcgcggtgtccctgactgtg 414
            |||| |||||||| |||||| |||| ||||| |||||||| || | ||| ||||| || |
Sbjct: 2487 tgcgaaaatagcttagaagaacctgagccttctctcttgcacgggctgtgcctgattgcg 2428

                                                                        
Query: 415  acagcgcgactagagggggcacggcaccctcttggagaactatgctgcagaacctgttgc 474
            |||  || || | ||| |||||| | || ||||| ||||| | | |||| |||||||| |
Sbjct: 2427 acaatgcaaccaaaggtggcacgacgccttcttgaagaaccagggtgcaaaacctgttac 2368

                      
Query: 475  tgtttgtgca 484
            ||||||||||
Sbjct: 2367 tgtttgtgca 2358
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>gb|AY219234.1| Nicotiana tabacum arm repeat-containing protein mRNA, complete cds
          Length = 2880

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 381  gccttttctcttgctcgcggtgtccctgactgtgacagcgcgactagagggggcacggca 440
            ||||||||||||||||  || || || ||||||||||  || ||||  || || || || 
Sbjct: 2534 gccttttctcttgctcttggggtgccggactgtgacaatgccactaatggaggtacagct 2475

                                                           
Query: 441  ccctcttggagaactatgctgcagaacctgttgctgtttgtgcatag 487
            || || |||||||| ||| ||||||||||| | ||||| ||||||||
Sbjct: 2474 ccttcctggagaaccatgttgcagaacctgctactgttagtgcatag 2428
to top
>gb|AC139575.3| Mus musculus BAC clone RP23-430K5 from 8, complete sequence
          Length = 192317

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 348   ctttggctgcggaaatagctaagaaga 374
             ||||| |||||||||||||||||||||
Sbjct: 44698 ctttgcctgcggaaatagctaagaaga 44672
to top
>gb|AC146939.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0064M09
              map near S6115, complete sequence
          Length = 215240

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 536    ctcgacgacttcgacgagggct 557
              ||||||||||||||||||||||
Sbjct: 123128 ctcgacgacttcgacgagggct 123107
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 14244513 ctcgacgacttcgacgagggct 14244534
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 12740452 ctcgacgacttcgacgagggct 12740431
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 18002497 ctcgacgacttcgacgagggct 18002518
to top
>dbj|AP005929.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0071G09
          Length = 169148

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 536   ctcgacgacttcgacgagggct 557
             ||||||||||||||||||||||
Sbjct: 68803 ctcgacgacttcgacgagggct 68824
to top
>dbj|AP005498.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0406D01
          Length = 163932

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 536   ctcgacgacttcgacgagggct 557
             ||||||||||||||||||||||
Sbjct: 76822 ctcgacgacttcgacgagggct 76843
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 353     gctgcggaaatagctaagaaga 374
               ||||||||||||||||||||||
Sbjct: 1080825 gctgcggaaatagctaagaaga 1080846
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 12819759 ctcgacgacttcgacgagggct 12819738
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 536      ctcgacgacttcgacgagggct 557
                ||||||||||||||||||||||
Sbjct: 14198793 ctcgacgacttcgacgagggct 14198814
to top
>emb|AL731749.3|CNS08C7Y Oryza sativa chromosome 12, . BAC OJ1312_H10 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 141067

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 536   ctcgacgacttcgacgagggct 557
             ||||||||||||||||||||||
Sbjct: 40131 ctcgacgacttcgacgagggct 40152
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>ref|NM_127878.2| Arabidopsis thaliana ubiquitin-protein ligase AT2G23140 mRNA,
            complete cds
          Length = 2436

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 507  gcgttttctttcccccgcgctgaacccagctcgacgacttc 547
            |||||||||||||| |  |||||||||| ||| ||||||||
Sbjct: 2297 gcgttttctttccctctagctgaacccaactcaacgacttc 2257
to top
>gb|AE010452.1| Methanopyrus kandleri AV19 section 151 of 157 of the complete genome
          Length = 11738

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 536  ctcgacgacttcgacgagggc 556
            |||||||||||||||||||||
Sbjct: 5831 ctcgacgacttcgacgagggc 5811
to top
>emb|AL589677.6| Human DNA sequence from clone RP11-12P4 on chromosome X, complete
             sequence
          Length = 129422

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 33    gcatgtacaaaaacaacaaag 53
             |||||||||||||||||||||
Sbjct: 78570 gcatgtacaaaaacaacaaag 78590
to top
>gb|AC004401.3| Arabidopsis thaliana chromosome 2 clone F21P24 map CIC06C07, complete
             sequence
          Length = 94038

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 507   gcgttttctttcccccgcgctgaacccagctcgacgacttc 547
             |||||||||||||| |  |||||||||| ||| ||||||||
Sbjct: 77553 gcgttttctttccctctagctgaacccaactcaacgacttc 77593
to top
>gb|AC002391.3| Arabidopsis thaliana chromosome 2 clone T20D16 map CIC06C07, complete
              sequence
          Length = 108881

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 507    gcgttttctttcccccgcgctgaacccagctcgacgacttc 547
              |||||||||||||| |  |||||||||| ||| ||||||||
Sbjct: 105445 gcgttttctttccctctagctgaacccaactcaacgacttc 105405
to top
>gb|U00034.1| Caenorhabditis elegans cosmid C06E8, complete sequence
          Length = 26435

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 13578 acccagctcgacgacgtcgacgag 13555
to top
>ref|NM_204735.1| Gallus gallus myosin VI (MYO6), mRNA
          Length = 3860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  ctatgctgcagaacctgttg 473
            ||||||||||||||||||||
Sbjct: 3830 ctatgctgcagaacctgttg 3849
to top
>gb|AF043696.1| Caenorhabditis elegans cosmid F07H8, complete sequence
          Length = 7269

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 530 acccagctcgacgacttcgacgag 553
           ||||||||||||||| ||||||||
Sbjct: 732 acccagctcgacgacgtcgacgag 755
to top
>gb|AF025462.1| Caenorhabditis elegans cosmid K10F12, complete sequence
          Length = 43305

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 35001 acccagctcgacgacgtcgacgag 34978
to top
>gb|AF067220.2| Caenorhabditis elegans cosmid C33E10, complete sequence
          Length = 42043

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 16346 acccagctcgacgacgtcgacgag 16369
to top
>gb|U58735.2| Caenorhabditis elegans cosmid F20B4, complete sequence
          Length = 21351

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 530 acccagctcgacgacttcgacgag 553
           ||||||||||||||| ||||||||
Sbjct: 704 acccagctcgacgacgtcgacgag 681
to top
>gb|AC009214.8| Drosophila melanogaster clone BACR05E09, complete sequence
          Length = 154772

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 203    tcaatttgactataaacaaacagt 226
              |||||||||||||||||| |||||
Sbjct: 102045 tcaatttgactataaacagacagt 102022
to top
>gb|AC084159.2| Caenorhabditis elegans cosmid Y73B3A, complete sequence
          Length = 122855

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 27139 acccagctcgacgacgtcgacgag 27116
to top
>emb|Z81028.1|CEB0365 Caenorhabditis elegans Cosmid B0365, complete sequence
          Length = 35964

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 11608 acccagctcgacgacgtcgacgag 11631
to top
>emb|Z79755.1|CEF43G9 Caenorhabditis elegans Cosmid F43G9, complete sequence
          Length = 38166

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 16671 acccagctcgacgacgtcgacgag 16694
to top
>emb|Z73976.1|CET07C12 Caenorhabditis elegans Cosmid T07C12, complete sequence
          Length = 33482

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 10597 acccagctcgacgacgtcgacgag 10620
to top
>emb|Z68336.1|CEF22B3 Caenorhabditis elegans Cosmid F22B3, complete sequence
          Length = 30480

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 14055 acccagctcgacgacgtcgacgag 14032
to top
>emb|Z99277.1|CEY53C12A Caenorhabditis elegans YAC Y53C12A, complete sequence
          Length = 26829

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 5985 acccagctcgacgacgtcgacgag 5962
to top
>gb|AF039712.1| Caenorhabditis elegans cosmid F54D7, complete sequence
          Length = 40457

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 39589 acccagctcgacgacgtcgacgag 39612
to top
>gb|U41008.1| Caenorhabditis elegans cosmid F44E8, complete sequence
          Length = 26465

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 24153 acccagctcgacgacgtcgacgag 24130
to top
>gb|AC150314.5| Mus musculus BAC clone RP23-269O24 from chromosome 10, complete sequence
          Length = 243006

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 214    ataaacaaacagtacacagc 233
              ||||||||||||||||||||
Sbjct: 102206 ataaacaaacagtacacagc 102225
to top
>emb|CR847897.15| Zebrafish DNA sequence from clone DKEY-90L8 in linkage group 8, complete
              sequence
          Length = 164571

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 471    ttgctgtttgtgcatagctg 490
              ||||||||||||||||||||
Sbjct: 133423 ttgctgtttgtgcatagctg 133442
to top
>emb|AJ278608.1|GGA278608 Gallus gallus mRNA for myosin VI (CMY6 gene)
          Length = 3860

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  ctatgctgcagaacctgttg 473
            ||||||||||||||||||||
Sbjct: 3830 ctatgctgcagaacctgttg 3849
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     tgctgcagaacctgttgctg 476
               ||||||||||||||||||||
Sbjct: 5518029 tgctgcagaacctgttgctg 5518010
to top
>gb|U40424.1| Caenorhabditis elegans cosmid C24A3, complete sequence
          Length = 25195

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 14893 acccagctcgacgacgtcgacgag 14870
to top
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 473    gctgtttgtgcatagctgaa 492
              ||||||||||||||||||||
Sbjct: 162099 gctgtttgtgcatagctgaa 162118
to top
>gb|U41032.1| Caenorhabditis elegans cosmid B0302, complete sequence
          Length = 30213

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 2039 acccagctcgacgacgtcgacgag 2062
to top
>gb|AC084152.1| Caenorhabditis elegans cosmid Y102A11A, complete sequence
          Length = 54345

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 5153 acccagctcgacgacgtcgacgag 5176
to top
>gb|AC092438.5| Homo sapiens BAC clone RP11-367M19 from 4, complete sequence
          Length = 67683

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 462   cagaacctgttgctgtttgt 481
             ||||||||||||||||||||
Sbjct: 21906 cagaacctgttgctgtttgt 21887
to top
>gb|AC087794.1| Caenorhabditis elegans cosmid Y32G9A, complete sequence
          Length = 48110

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 25076 acccagctcgacgacgtcgacgag 25053
to top
>emb|CR385693.1| Gallus gallus finished cDNA, clone ChEST879l11
          Length = 750

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 454 ctatgctgcagaacctgttg 473
           ||||||||||||||||||||
Sbjct: 28  ctatgctgcagaacctgttg 47
to top
>ref|NM_078379.1| Caenorhabditis elegans B0302.3 (B0302.3) mRNA, complete cds
          Length = 840

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 530 acccagctcgacgacttcgacgag 553
           ||||||||||||||| ||||||||
Sbjct: 214 acccagctcgacgacgtcgacgag 237
to top
>gb|U40801.1| Caenorhabditis elegans cosmid F28E10, complete sequence
          Length = 38614

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 4292 acccagctcgacgacgtcgacgag 4269
to top
>gb|AF054983.1|AF054983 Caenorhabditis elegans RTE-1 non-LTR retrotransposon, complete
            sequence
          Length = 3291

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 2632 acccagctcgacgacgtcgacgag 2655
to top
>emb|AJ326931.1|HSA326931 Homo sapiens genomic sequence surrounding NotI site, clone
           NL1-ZG10R
          Length = 732

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 553 gggctgggataccacgggcctgcc 576
           ||||| ||||||||||||||||||
Sbjct: 285 gggcttggataccacgggcctgcc 308
to top
>emb|AL132952.1|CEY51H4A Caenorhabditis elegans YAC Y51H4A, complete sequence
          Length = 269619

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 530    acccagctcgacgacttcgacgag 553
              ||||||||||||||| ||||||||
Sbjct: 263457 acccagctcgacgacgtcgacgag 263480
to top
>emb|AL117193.2|CEY105C5A Caenorhabditis elegans YAC Y105C5A, complete sequence
          Length = 314838

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 50964 acccagctcgacgacgtcgacgag 50987
to top
>gb|AE003636.4| Drosophila melanogaster chromosome 2L, section 45 of 83 of the complete
             sequence
          Length = 246231

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 203   tcaatttgactataaacaaacagt 226
             |||||||||||||||||| |||||
Sbjct: 84302 tcaatttgactataaacagacagt 84325
to top
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 457     tgctgcagaacctgttgctg 476
               ||||||||||||||||||||
Sbjct: 2791177 tgctgcagaacctgttgctg 2791158
to top
>emb|Z83114.1|CEK09B11 Caenorhabditis elegans Cosmid K09B11, complete sequence
          Length = 38801

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 22754 acccagctcgacgacgtcgacgag 22777
to top
>gb|AF025453.1| Caenorhabditis elegans cosmid C08F1, complete sequence
          Length = 41258

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 33851 acccagctcgacgacgtcgacgag 33828
to top
>gb|AC147237.3| Mus musculus BAC clone RP23-370E6 from 3, complete sequence
          Length = 175691

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 286   ctacaaaactatgatgctaa 305
             ||||||||||||||||||||
Sbjct: 95247 ctacaaaactatgatgctaa 95266
to top
>gb|AC140787.4| Mus musculus BAC clone RP23-411H17 from 10, complete sequence
          Length = 217336

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 214   ataaacaaacagtacacagc 233
             ||||||||||||||||||||
Sbjct: 45924 ataaacaaacagtacacagc 45905
to top
>emb|Z83319.1|CET02D1 Caenorhabditis elegans Cosmid T02D1, complete sequence
          Length = 31768

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 530  acccagctcgacgacttcgacgag 553
            ||||||||||||||| ||||||||
Sbjct: 4629 acccagctcgacgacgtcgacgag 4652
to top
>emb|Z79599.1|CEF47C8 Caenorhabditis elegans Cosmid F47C8, complete sequence
          Length = 27019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 24825 acccagctcgacgacgtcgacgag 24848
to top
>gb|U41013.1| Caenorhabditis elegans cosmid T06C10, complete sequence
          Length = 36143

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 530   acccagctcgacgacttcgacgag 553
             ||||||||||||||| ||||||||
Sbjct: 23478 acccagctcgacgacgtcgacgag 23455
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>gb|CP000103.1| Nitrosospira multiformis ATCC 25196, complete genome
          Length = 3184243

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 451     gaactatgctgcagaacctg 470
               ||||||||||||||||||||
Sbjct: 2380331 gaactatgctgcagaacctg 2380350
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>emb|X54489.1|HSMGSAG Human gene for melanoma growth stimulatory activity (MGSA)
          Length = 1895

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 462 cagaacctgttgctgtttgt 481
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Sbjct: 933 cagaacctgttgctgtttgt 914


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,824,138
Number of Sequences: 3902068
Number of extensions: 4824138
Number of successful extensions: 88044
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 87651
Number of HSP's gapped (non-prelim): 392
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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