ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22h21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clon... 563 e-157
2dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 555 e-155
3gb|AY106213.1| Zea mays PCO107956 mRNA sequence 507 e-140
4ref|NM_193394.1| Oryza sativa (japonica cultivar-group), predic... 254 3e-64
5gb|BT017041.1| Zea mays clone EL01N0202G12.c mRNA sequence 149 1e-32
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
7dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
8dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic D... 135 2e-28
9gb|BT014436.1| Lycopersicon esculentum clone 133758F, mRNA sequence 62 3e-06
10dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 48 0.038
11ref|NM_113023.3| Arabidopsis thaliana UBP7 (UBIQUITIN-SPECIFIC P... 46 0.15
12ref|NM_104049.2| Arabidopsis thaliana UBP6 (UBIQUITIN-SPECIFIC P... 46 0.15
13gb|BT011830.1| Arabidopsis thaliana At1g51710 mRNA sequence 46 0.15
14gb|BT000658.1| Arabidopsis thaliana clone RAFL07-09-J05 (R10664)... 46 0.15
15gb|AY114081.1| Arabidopsis thaliana putative ubiquitin-specific ... 46 0.15
16gb|AY050817.1| Arabidopsis thaliana putative ubiquitin-specific ... 46 0.15
17emb|BX815065.1|CNS0AD0E Arabidopsis thaliana Full-length cDNA Co... 46 0.15
18emb|BX815103.1|CNS0ACY7 Arabidopsis thaliana Full-length cDNA Co... 46 0.15
19emb|BX824727.1|CNS0A6UW Arabidopsis thaliana Full-length cDNA Co... 46 0.15
20gb|AF302661.1|AF302661 Arabidopsis thaliana ubiquitin-specific p... 46 0.15
21gb|AF302660.1|AF302660 Arabidopsis thaliana ubiquitin-specific p... 46 0.15
22gb|BT003992.1| Arabidopsis thaliana clone RAFL15-40-P05 (R20912)... 46 0.15
23gb|AY084730.1| Arabidopsis thaliana clone 116145 mRNA, complete ... 46 0.15
24ref|XM_389096.1| Gibberella zeae PH-1 chromosome 2 hypothetical ... 44 0.59
25emb|AL360178.10| Human DNA sequence from clone RP11-371H1 on chr... 44 0.59
26ref|XM_817602.1| Trypanosoma brucei TREU927 DNA damage repair pr... 42 2.3
27gb|AC008071.2| Homo sapiens BAC clone RP11-388L11 from 7, comple... 42 2.3
28emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chrom... 42 2.3
29gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, compl... 42 2.3
30dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827 42 2.3
31dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183 42 2.3
32gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Can... 42 2.3
33emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in ... 42 2.3
34gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F1... 42 2.3
35dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 42 2.3
36gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.67... 42 2.3
37emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in... 42 2.3
38ref|XM_365357.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 9.3
39ref|NM_025813.1| Mus musculus major facilitator superfamily doma... 40 9.3
40emb|AL359995.13| Human DNA sequence from clone RP13-209A14 on ch... 40 9.3
41gb|AC060231.8| Homo sapiens chromosome 10 clone RP11-435G3, comp... 40 9.3
42gb|AC090133.6| Homo sapiens chromosome 8, clone RP11-813L8, comp... 40 9.3
43gb|AC011146.10| Homo sapiens chromosome 8, clone RP11-2F15, comp... 40 9.3
44gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome 40 9.3
45gb|AC025089.9| Homo sapiens chromosome 8, clone RP11-275B19, com... 40 9.3
46dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001 40 9.3
47gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, com... 40 9.3
48dbj|AK136108.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 40 9.3
49dbj|AK135235.1| Mus musculus 12 days embryo male wolffian duct i... 40 9.3
50dbj|AK152444.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 9.3
51dbj|AK166645.1| Mus musculus morula whole body morula cDNA, RIKE... 40 9.3
52dbj|AK159554.1| Mus musculus osteoclast-like cell cDNA, RIKEN fu... 40 9.3
53dbj|AK032688.1| Mus musculus 10 days neonate cerebellum cDNA, RI... 40 9.3
54gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 9.3
55dbj|AK075859.1| Mus musculus adult male tongue cDNA, RIKEN full-... 40 9.3
56dbj|AK004586.1| Mus musculus adult male lung cDNA, RIKEN full-le... 40 9.3
57gb|AC084633.1|CBRG45G04 Caenorhabditis briggsae cosmid G45G04, c... 40 9.3
58gb|AC069553.6|AC069553 Genomic Sequence For Arabidopsis thaliana... 40 9.3
59gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22... 40 9.3
60gb|AC051625.6|AC051625 Genomic Sequence For Arabidopsis thaliana... 40 9.3
61dbj|AK208838.1| Mus musculus cDNA, clone:Y2G0112O17, strand:plus... 40 9.3
62gb|AY603631.1| Culicoides sonorensis clone Cssg00671A unknown sa... 40 9.3
63dbj|AB046440.1| Arabidopsis thaliana DNA, chromosome 5 centromer... 40 9.3
64gb|BC024891.1| Mus musculus major facilitator superfamily domain... 40 9.3
65emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on ch... 40 9.3
66gb|AC102493.8| Mus musculus chromosome 8, clone RP24-546F2, comp... 40 9.3
67emb|AL732627.14| Mouse DNA sequence from clone RP23-183L6 on chr... 40 9.3
68gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, comple... 40 9.3
69emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on ch... 40 9.3
70dbj|AB025906.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropa... 40 9.3
71dbj|AB032935.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropa... 40 9.3 
>dbj|AK066233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013056M18, full
            insert sequence
          Length = 1835

 Score =  563 bits (284), Expect = e-157
 Identities = 480/544 (88%), Gaps = 1/544 (0%)
 Strand = Plus / Minus

                                                                        
Query: 134  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 193
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1553 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1494

                                                                        
Query: 194  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 253
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1493 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1434

                                                                        
Query: 254  ttccatcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgt 313
            | || ||||||||||||||||||||||| || || || || ||||||||||| || ||||
Sbjct: 1433 tcccgtcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgt 1374

                                                                        
Query: 314  gtgtcaagacagcaattaaatcatagatcccagttaattgtttctttggcacagaagaat 373
            | ||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1373 gcgtcaaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacagaagaat 1314

                                                                        
Query: 374  cagctttgtcaatgtccatgctagatgattccccggcactagttgatgacccctcaatat 433
            | ||||||||||| |||||||| ||||||||||| ||| |  ||||||| |||||| | |
Sbjct: 1313 cggctttgtcaatatccatgctggatgattccccagcattgcttgatgaaccctcatttt 1254

                                                                        
Query: 434  tttgtgagctgcttgttttcacctgtactttcaaaccaaacttggcactttctgcatctc 493
             || ||||||||| |  ||  | ||| |||| || |||||||| ||| ||||||||||||
Sbjct: 1253 cttttgagctgctggcctttccttgtgcttttaatccaaacttagcattttctgcatctc 1194

                                                                        
Query: 494  tcagcacctgtcgaggagtttgaagttttagtttcagctcatccgagcagaagtcataga 553
            |||||| |||||| |||| ||| |||||| ||||||| ||||| ||||| |||||||| |
Sbjct: 1193 tcagcatctgtcggggagcttggagtttttgtttcagttcatctgagcaaaagtcataaa 1134

                                                                        
Query: 554  catcaagctccagagggtaatccacttttacgtaaaatctttgccttctggtttgactcc 613
            |||| || ||||| |||||||| || ||| |||||||||||||||||||||||||| |||
Sbjct: 1133 catccagttccagcgggtaatcaac-tttccgtaaaatctttgccttctggtttgattcc 1075

                                                                        
Query: 614  cttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaactcatttattctc 673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1074 cttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaactcatttattctt 1015

                
Query: 674  gact 677
            ||||
Sbjct: 1014 gact 1011
to top
>dbj|AK062019.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F09, full
            insert sequence
          Length = 1629

 Score =  555 bits (280), Expect = e-155
 Identities = 479/544 (88%), Gaps = 1/544 (0%)
 Strand = Plus / Minus

                                                                        
Query: 134  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 193
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1480 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1421

                                                                        
Query: 194  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 253
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1420 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1361

                                                                        
Query: 254  ttccatcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgt 313
            | || ||||| ||||||||||||||||| || || || || ||||||||||| || ||||
Sbjct: 1360 tcccgtcatcatgcttaacccagccaacataatggcctgagtctgcacttctccctttgt 1301

                                                                        
Query: 314  gtgtcaagacagcaattaaatcatagatcccagttaattgtttctttggcacagaagaat 373
            | ||||| |||||||||||||||||||| ||||| || ||||||||||||||||||||||
Sbjct: 1300 gcgtcaaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacagaagaat 1241

                                                                        
Query: 374  cagctttgtcaatgtccatgctagatgattccccggcactagttgatgacccctcaatat 433
            | ||||||||||| |||||||| ||||||||||| ||| |  ||||||| |||||| | |
Sbjct: 1240 cggctttgtcaatatccatgctggatgattccccagcattgcttgatgaaccctcatttt 1181

                                                                        
Query: 434  tttgtgagctgcttgttttcacctgtactttcaaaccaaacttggcactttctgcatctc 493
             || ||||||||| |  ||  | ||| |||| || |||||||| ||| ||||||||||||
Sbjct: 1180 cttttgagctgctggcctttccttgtgcttttaatccaaacttagcattttctgcatctc 1121

                                                                        
Query: 494  tcagcacctgtcgaggagtttgaagttttagtttcagctcatccgagcagaagtcataga 553
            |||||| |||||| |||| ||| |||||| ||||||| ||||| ||||| |||||||| |
Sbjct: 1120 tcagcatctgtcggggagcttggagtttttgtttcagttcatctgagcaaaagtcataaa 1061

                                                                        
Query: 554  catcaagctccagagggtaatccacttttacgtaaaatctttgccttctggtttgactcc 613
            |||| || ||||| |||||||| || ||| |||||||||||||||||||||||||| |||
Sbjct: 1060 catccagttccagcgggtaatcaac-tttccgtaaaatctttgccttctggtttgattcc 1002

                                                                        
Query: 614  cttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaactcatttattctc 673
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1001 cttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaactcatttattctt 942

                
Query: 674  gact 677
            ||||
Sbjct: 941  gact 938
to top
>gb|AY106213.1| Zea mays PCO107956 mRNA sequence
          Length = 1770

 Score =  507 bits (256), Expect = e-140
 Identities = 461/528 (87%), Gaps = 1/528 (0%)
 Strand = Plus / Minus

                                                                        
Query: 145  gctttataaaggcagatataagccatgtgccagtcgcctccaccagataatttcaaaatc 204
            ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 1472 gctttgtataggcagatataagccatgtgccagtcacctccaccagatagtttcaaaatg 1413

                                                                        
Query: 205  tcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccattttccatcatct 264
            ||||||||||| || ||| |||||||||| ||||||||||| ||||||||||| ||||||
Sbjct: 1412 tcttcctccttgcggatgtttgggttgtcatcatcaaactcgatccattttccgtcatct 1353

                                                                        
Query: 265  tgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtcaagaca 324
            ||||| ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 1352 tgctttacccagccaacatagtggccagagtctgcacttcttcccttgtgtgtcaagaca 1293

                                                                        
Query: 325  gcaattaaatcatagatcccagttaattgtttctttggcacagaagaatcagctttgtca 384
            ||||  ||||||||||  |||||||||||||||||||| | |||||| ||||||||||||
Sbjct: 1292 gcaaccaaatcatagacgccagttaattgtttctttggtagagaagactcagctttgtca 1233

                                                                        
Query: 385  atgtccatgctagatgattccccggcactagttgatgacccctcaatattttgtgagctg 444
            |||||||| || ||||||||||| || ||| | ||||| |||||| | | ||   ||| |
Sbjct: 1232 atgtccatactggatgattccccagcgctactggatgatccctcattttctttaaagccg 1173

                                                                        
Query: 445  cttgttttcacctgtactttcaaaccaaacttggcactttctgcatctctcagcacctgt 504
            || | |||| | ||| ||||||| |||||||| ||| |||||||||||||||||| ||| 
Sbjct: 1172 ctagctttcccttgtgctttcaatccaaactttgcattttctgcatctctcagcatctgc 1113

                                                                        
Query: 505  cgaggagtttgaagttttagtttcagctcatccgagcagaagtcatagacatcaagctcc 564
            ||||| | ||| |||||  ||||||| ||||| ||||| || ||||| ||||| |  |||
Sbjct: 1112 cgaggtgcttggagtttctgtttcagttcatcagagcaaaattcataaacatccaattcc 1053

                                                                        
Query: 565  agagggtaatccacttttacgtaaaatctttgccttctggtttgactcccttttccaaaa 624
            || |||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 1052 agtgggtaatcaactttt-cgtaaaatctttgccttttggtttgattcccttttccaaaa 994

                                                            
Query: 625  gaaacgaacaaactgcacagtcaagtacctaggcaactcatttattct 672
            ||| ||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 993  gaagcgaacgaactgcacagtcaagtacctaggcagctcatttattct 946
to top
>ref|NM_193394.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1512

 Score =  254 bits (128), Expect = 3e-64
 Identities = 200/224 (89%)
 Strand = Plus / Minus

                                                                        
Query: 134  agataacacgagctttataaaggcagatataagccatgtgccagtcgcctccaccagata 193
            |||||||||||||||| || ||||| || |||||||||||||||||||||||||||||||
Sbjct: 1510 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcctccaccagata 1451

                                                                        
Query: 194  atttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccatt 253
            | || ||||||||||||||||| |||||||| |||||||| |||||||| ||||||||||
Sbjct: 1450 actttaaaatctcttcctccttgcgtatgctagggttgtcatcatcaaattcaatccatt 1391

                                                                        
Query: 254  ttccatcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgt 313
            | || ||||||||||||||||||||||| || || || || ||||||||||| || ||||
Sbjct: 1390 tcccgtcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgt 1331

                                                        
Query: 314  gtgtcaagacagcaattaaatcatagatcccagttaattgtttc 357
            | ||||| |||||||||||||||||||| ||||| || ||||||
Sbjct: 1330 gcgtcaaaacagcaattaaatcatagatgccagtcaaatgtttc 1287



 Score =  214 bits (108), Expect = 3e-52
 Identities = 166/184 (90%), Gaps = 1/184 (0%)
 Strand = Plus / Minus

                                                                        
Query: 469  ccaaacttggcactttctgcatctctcagcacctgtcgaggagtttgaagttttagtttc 528
            |||||||| ||| |||||||||||||||||| |||||| |||| ||| |||||| |||||
Sbjct: 1184 ccaaacttagcattttctgcatctctcagcatctgtcggggagcttggagtttttgtttc 1125

                                                                        
Query: 529  agctcatccgagcagaagtcatagacatcaagctccagagggtaatccacttttacgtaa 588
            || ||||| ||||| |||||||| ||||| || ||||| |||||||| |||||  |||||
Sbjct: 1124 agttcatctgagcaaaagtcataaacatccagttccagcgggtaatcaactttc-cgtaa 1066

                                                                        
Query: 589  aatctttgccttctggtttgactcccttttccaaaagaaacgaacaaactgcacagtcaa 648
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 1065 aatctttgccttctggtttgattcccttttccaaaagaaacgaacaaactgcacagtcaa 1006

                
Query: 649  gtac 652
            ||||
Sbjct: 1005 gtac 1002
to top
>gb|BT017041.1| Zea mays clone EL01N0202G12.c mRNA sequence
          Length = 592

 Score =  149 bits (75), Expect = 1e-32
 Identities = 111/123 (90%)
 Strand = Plus / Minus

                                                                       
Query: 145 gctttataaaggcagatataagccatgtgccagtcgcctccaccagataatttcaaaatc 204
           ||||| || |||||||||||||||||||||||||| ||||||||||||| ||||||||| 
Sbjct: 133 gctttgtataggcagatataagccatgtgccagtcacctccaccagatagtttcaaaatg 74

                                                                       
Query: 205 tcttcctcctttcgtatgcttgggttgtcgtcatcaaactcaatccattttccatcatct 264
           ||||||||||| || ||| |||| ||||| ||||||||||| ||||||||||| ||||||
Sbjct: 73  tcttcctccttgcggatgtttggattgtcatcatcaaactcgatccattttccgtcatct 14

              
Query: 265 tgc 267
           |||
Sbjct: 13  tgc 11
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                            
Query: 259      tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 318
                ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 20578319 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 20578378

                                                                        
Query: 319      aagacagcaattaaatcatagatcccagttaattgtttctttggcacagaagaatc 374
                || |||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 20578379 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacagaagaatc 20578434



 Score =  133 bits (67), Expect = 8e-28
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                            
Query: 584      cgtaaaatctttgccttctggtttgactcccttttccaaaagaaacgaacaaactgcaca 643
                |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 20579597 cgtaaaatctttgccttctggtttgattcccttttccaaaagaaacgaacaaactgcaca 20579656

                           
Query: 644      gtcaagtacct 654
                |||||||||||
Sbjct: 20579657 gtcaagtacct 20579667



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 181      cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 240
                |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 20578161 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 20578220

                              
Query: 241      aactcaatccattt 254
                || |||||||||||
Sbjct: 20578221 aattcaatccattt 20578234



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                  
Query: 134      agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 183
                |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 20578033 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 20578082



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 469      ccaaacttggcactttctgcatctctcagca 499
                |||||||| ||| ||||||||||||||||||
Sbjct: 20578876 ccaaacttagcattttctgcatctctcagca 20578906



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 377      ctttgtcaatgtccatgctagatgattcccc 407
                |||||||||| |||||||| |||||||||||
Sbjct: 20578635 ctttgtcaatatccatgctggatgattcccc 20578665



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 652      cctaggcaactcatttattctcgact 677
                ||||||||||||||||||||| ||||
Sbjct: 20579744 cctaggcaactcatttattcttgact 20579769
to top
>dbj|AP004258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0024F24
          Length = 172642

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                         
Query: 259   tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 318
             ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 40295 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 40354

                                                                     
Query: 319   aagacagcaattaaatcatagatcccagttaattgtttctttggcacagaagaatc 374
             || |||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 40355 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacagaagaatc 40410



 Score =  133 bits (67), Expect = 8e-28
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                         
Query: 584   cgtaaaatctttgccttctggtttgactcccttttccaaaagaaacgaacaaactgcaca 643
             |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 41573 cgtaaaatctttgccttctggtttgattcccttttccaaaagaaacgaacaaactgcaca 41632

                        
Query: 644   gtcaagtacct 654
             |||||||||||
Sbjct: 41633 gtcaagtacct 41643



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                         
Query: 181   cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 240
             |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 40137 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 40196

                           
Query: 241   aactcaatccattt 254
             || |||||||||||
Sbjct: 40197 aattcaatccattt 40210



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 134   agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 183
             |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 40009 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 40058



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 469   ccaaacttggcactttctgcatctctcagca 499
             |||||||| ||| ||||||||||||||||||
Sbjct: 40852 ccaaacttagcattttctgcatctctcagca 40882



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 377   ctttgtcaatgtccatgctagatgattcccc 407
             |||||||||| |||||||| |||||||||||
Sbjct: 40611 ctttgtcaatatccatgctggatgattcccc 40641



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 652   cctaggcaactcatttattctcgact 677
             ||||||||||||||||||||| ||||
Sbjct: 41720 cctaggcaactcatttattcttgact 41745
to top
>dbj|AP004225.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1156H12
          Length = 159509

 Score =  135 bits (68), Expect = 2e-28
 Identities = 104/116 (89%)
 Strand = Plus / Plus

                                                                          
Query: 259    tcatcttgcttaacccagccaacgtagtgaccagaatctgcacttcttcccttgtgtgtc 318
              ||||||||||||||||||||||| || || || || ||||||||||| || ||||| |||
Sbjct: 102141 tcatcttgcttaacccagccaacataatggcctgagtctgcacttctccctttgtgcgtc 102200

                                                                      
Query: 319    aagacagcaattaaatcatagatcccagttaattgtttctttggcacagaagaatc 374
              || |||||||||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 102201 aaaacagcaattaaatcatagatgccagtcaaatgtttctttggcacagaagaatc 102256



 Score =  133 bits (67), Expect = 8e-28
 Identities = 70/71 (98%)
 Strand = Plus / Plus

                                                                          
Query: 584    cgtaaaatctttgccttctggtttgactcccttttccaaaagaaacgaacaaactgcaca 643
              |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 103419 cgtaaaatctttgccttctggtttgattcccttttccaaaagaaacgaacaaactgcaca 103478

                         
Query: 644    gtcaagtacct 654
              |||||||||||
Sbjct: 103479 gtcaagtacct 103489



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                          
Query: 181    cctccaccagataatttcaaaatctcttcctcctttcgtatgcttgggttgtcgtcatca 240
              |||||||||||||| || ||||||||||||||||| |||||||| |||||||| ||||||
Sbjct: 101983 cctccaccagataactttaaaatctcttcctccttgcgtatgctagggttgtcatcatca 102042

                            
Query: 241    aactcaatccattt 254
              || |||||||||||
Sbjct: 102043 aattcaatccattt 102056



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                                
Query: 134    agataacacgagctttataaaggcagatataagccatgtgccagtcgcct 183
              |||||||||||||||| || ||||| || |||||||||||||||||||||
Sbjct: 101855 agataacacgagctttgtacaggcaaatgtaagccatgtgccagtcgcct 101904



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 469    ccaaacttggcactttctgcatctctcagca 499
              |||||||| ||| ||||||||||||||||||
Sbjct: 102698 ccaaacttagcattttctgcatctctcagca 102728



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                             
Query: 377    ctttgtcaatgtccatgctagatgattcccc 407
              |||||||||| |||||||| |||||||||||
Sbjct: 102457 ctttgtcaatatccatgctggatgattcccc 102487



 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 652    cctaggcaactcatttattctcgact 677
              ||||||||||||||||||||| ||||
Sbjct: 103566 cctaggcaactcatttattcttgact 103591
to top
>gb|BT014436.1| Lycopersicon esculentum clone 133758F, mRNA sequence
          Length = 1301

 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 584  cgtaaaatctttgccttctggtttgactcccttttccaaaagaaacg 630
            |||||||||||||||||||| ||||| ||||||||||| || |||||
Sbjct: 1118 cgtaaaatctttgccttctgatttgattcccttttccagaaaaaacg 1072
to top
>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 48.1 bits (24), Expect = 0.038
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                  
Query: 616    tttccaaaagaaacgaacaaactgcacagtcaagta 651
              |||||||||||||||||| || |||||||| |||||
Sbjct: 302972 tttccaaaagaaacgaacgaagtgcacagttaagta 302937
to top
>ref|NM_113023.3| Arabidopsis thaliana UBP7 (UBIQUITIN-SPECIFIC PROTEASE 7);
            cysteine-type endopeptidase/ ubiquitin thiolesterase/
            ubiquitin-specific protease AT3G21280 (UBP7) mRNA,
            complete cds
          Length = 1811

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            ||||| |||||| ||||| |  |||||||| |||||||||||||| |||||
Sbjct: 1143 ctcccgtttccagaagaatctcacaaactgaacagtcaagtaccttggcaa 1093
to top
>ref|NM_104049.2| Arabidopsis thaliana UBP6 (UBIQUITIN-SPECIFIC PROTEASE 6);
            ubiquitin-specific protease AT1G51710 (UBP6) mRNA,
            complete cds
          Length = 1678

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1017 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 967
to top
>gb|BT011830.1| Arabidopsis thaliana At1g51710 mRNA sequence
          Length = 1446

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 610 ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
           |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 945 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 895
to top
>gb|BT000658.1| Arabidopsis thaliana clone RAFL07-09-J05 (R10664) putative
            ubiquitin-specific protease 6 (UBP6) (At1g51710) mRNA,
            complete cds
          Length = 1689

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1018 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 968
to top
>gb|AY114081.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP6
           (At1g51710) mRNA, complete cds
          Length = 1480

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 610 ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
           |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 948 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 898
to top
>gb|AY050817.1| Arabidopsis thaliana putative ubiquitin-specific protease UBP6
            (At1g51710) mRNA, complete cds
          Length = 1659

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1013 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 963
to top
>emb|BX815065.1|CNS0AD0E Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS2ZG04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1615

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 610 ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
           |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 984 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 934
to top
>emb|BX815103.1|CNS0ACY7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS32ZG09 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1608

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1005 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 955
to top
>emb|BX824727.1|CNS0A6UW Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH68ZB09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1809

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            ||||| |||||| ||||| |  |||||||| |||||||||||||| |||||
Sbjct: 1142 ctcccgtttccagaagaatctcacaaactgaacagtcaagtaccttggcaa 1092
to top
>gb|AF302661.1|AF302661 Arabidopsis thaliana ubiquitin-specific protease 7 (UBP7) gene,
            complete cds
          Length = 1587

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            ||||| |||||| ||||| |  |||||||| |||||||||||||| |||||
Sbjct: 1020 ctcccgtttccagaagaatctcacaaactgaacagtcaagtaccttggcaa 970
to top
>gb|AF302660.1|AF302660 Arabidopsis thaliana ubiquitin-specific protease 6 (UBP6) gene,
            complete cds
          Length = 1675

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1014 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 964
to top
>gb|BT003992.1| Arabidopsis thaliana clone RAFL15-40-P05 (R20912) putative
            ubiquitin-specific protease 7 (UBP7) (At3g21280) mRNA,
            complete cds
          Length = 1685

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            ||||| |||||| ||||| |  |||||||| |||||||||||||| |||||
Sbjct: 1019 ctcccgtttccagaagaatctcacaaactgaacagtcaagtaccttggcaa 969
to top
>gb|AY084730.1| Arabidopsis thaliana clone 116145 mRNA, complete sequence
          Length = 1658

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                               
Query: 610  ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacctaggcaa 660
            |||||||||||| || || || || ||||| |||||||||||||| |||||
Sbjct: 1017 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtaccttggcaa 967
to top
>ref|XM_389096.1| Gibberella zeae PH-1 chromosome 2 hypothetical protein (FG08920.1)
            partial mRNA
          Length = 1707

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 614  cttttccaaaagaaacgaacaaactgcacagtcaagta 651
            |||||||| ||||| || ||||| ||||||||||||||
Sbjct: 1004 cttttccagaagaagcgcacaaaatgcacagtcaagta 967
to top
>emb|AL360178.10| Human DNA sequence from clone RP11-371H1 on chromosome 6 Contains part
             of the PDE7B gene for phosphodiesterase 7B, complete
             sequence
          Length = 111551

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 588   aaatctttgccttctggtttgactcc 613
             |||||||||||||| |||||||||||
Sbjct: 79196 aaatctttgccttcaggtttgactcc 79221
to top
>ref|XM_817602.1| Trypanosoma brucei TREU927 DNA damage repair protein (Tb10.70.2740)
            partial mRNA
          Length = 1842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 597  ccttctggtttgactcccttttccaaaag 625
            |||||||||||||| |||||||| |||||
Sbjct: 1537 ccttctggtttgacgcccttttcgaaaag 1509
to top
>gb|AC008071.2| Homo sapiens BAC clone RP11-388L11 from 7, complete sequence
          Length = 129938

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 604   gtttgactcccttttccaaaa 624
             |||||||||||||||||||||
Sbjct: 23027 gtttgactcccttttccaaaa 23047
to top
>emb|AL512286.6| Human DNA sequence from clone RP11-45J1 on chromosome X Contains a
             prefoldin 4 (PFDN4) pseudogene, the 5' end of a novel gene
             and a CpG island, complete sequence
          Length = 91875

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 315   tgtcaagacagcaattaaatc 335
             |||||||||||||||||||||
Sbjct: 86903 tgtcaagacagcaattaaatc 86883
to top
>gb|AC114933.2| Homo sapiens chromosome 5 clone CTD-2023M8, complete sequence
          Length = 177958

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 347    ttaattgtttctttggcacag 367
              |||||||||||||||||||||
Sbjct: 107367 ttaattgtttctttggcacag 107387
to top
>dbj|AK095052.1| Homo sapiens cDNA FLJ37733 fis, clone BRHIP2020827
          Length = 2906

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 236  catcaaactcaatccattttc 256
            |||||||||||||||||||||
Sbjct: 1053 catcaaactcaatccattttc 1073
to top
>dbj|AK094349.1| Homo sapiens cDNA FLJ37030 fis, clone BRACE2011183
          Length = 2304

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 236 catcaaactcaatccattttc 256
           |||||||||||||||||||||
Sbjct: 452 catcaaactcaatccattttc 472
to top
>gb|AC092547.7| Homo sapiens 3q BAC RP11-371L14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 178328

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 236    catcaaactcaatccattttc 256
              |||||||||||||||||||||
Sbjct: 177512 catcaaactcaatccattttc 177532
to top
>emb|BX569778.15| Zebrafish DNA sequence from clone DKEY-21J8 in linkage group 1, complete
              sequence
          Length = 255895

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 627    aacgaacaaactgcacagtca 647
              |||||||||||||||||||||
Sbjct: 157957 aacgaacaaactgcacagtca 157977
to top
>gb|AC025294.14|AC025294 Arabidopsis thaliana chromosome 1 BAC F19C24 genomic sequence, complete
             sequence
          Length = 124511

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Minus

                                                          
Query: 610   ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacct 654
             |||||||||||| || || || || ||||| ||||||||||||||
Sbjct: 68817 ctcccttttccagaaaaaccgcacgaactgaacagtcaagtacct 68773
to top
>dbj|AB023045.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MXL8
          Length = 85599

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 39/45 (86%)
 Strand = Plus / Plus

                                                          
Query: 610   ctcccttttccaaaagaaacgaacaaactgcacagtcaagtacct 654
             ||||| |||||| ||||| |  |||||||| ||||||||||||||
Sbjct: 61109 ctcccgtttccagaagaatctcacaaactgaacagtcaagtacct 61153
to top
>gb|AC007510.6|AC007510 Homo sapiens chromosome 17, clone hRPK.678_P_16, complete sequence
          Length = 156420

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 236   catcaaactcaatccattttc 256
             |||||||||||||||||||||
Sbjct: 19786 catcaaactcaatccattttc 19766
to top
>emb|BX908747.25| Zebrafish DNA sequence from clone DKEY-58J15 in linkage group 1, complete
              sequence
          Length = 232503

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 627    aacgaacaaactgcacagtca 647
              |||||||||||||||||||||
Sbjct: 208779 aacgaacaaactgcacagtca 208759
to top
>ref|XM_365357.1| Magnaporthe grisea 70-15 hypothetical protein (MG02059.4) partial
           mRNA
          Length = 8841

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 657 gcaactcatttattctcgac 676
           ||||||||||||||||||||
Sbjct: 783 gcaactcatttattctcgac 802
to top
>ref|NM_025813.1| Mus musculus major facilitator superfamily domain containing 1
            (Mfsd1), mRNA
          Length = 2980

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
to top
>emb|AL359995.13| Human DNA sequence from clone RP13-209A14 on chromosome 10, complete
            sequence
          Length = 23336

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 188  cagataatttcaaaatctcttcct 211
            |||||||||||||||| |||||||
Sbjct: 3044 cagataatttcaaaatatcttcct 3067



 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 185  caccagataatttcaaaatc 204
            ||||||||||||||||||||
Sbjct: 3021 caccagataatttcaaaatc 3040
to top
>gb|AC060231.8| Homo sapiens chromosome 10 clone RP11-435G3, complete sequence
          Length = 193519

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 250  cattttccatcatcttgctt 269
            ||||||||||||||||||||
Sbjct: 7723 cattttccatcatcttgctt 7742
to top
>gb|AC090133.6| Homo sapiens chromosome 8, clone RP11-813L8, complete sequence
          Length = 201279

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 191   ataatttcaaaatctcttcc 210
             ||||||||||||||||||||
Sbjct: 27279 ataatttcaaaatctcttcc 27260
to top
>gb|AC011146.10| Homo sapiens chromosome 8, clone RP11-2F15, complete sequence
          Length = 156951

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 78   acacaacttcagaaatataa 97
            ||||||||||||||||||||
Sbjct: 4933 acacaacttcagaaatataa 4914
to top
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 238     tcaaactcaatccattttccatca 261
               ||||| ||||||||||||||||||
Sbjct: 3517555 tcaaattcaatccattttccatca 3517532
to top
>gb|AC025089.9| Homo sapiens chromosome 8, clone RP11-275B19, complete sequence
          Length = 165870

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 78   acacaacttcagaaatataa 97
            ||||||||||||||||||||
Sbjct: 7084 acacaacttcagaaatataa 7103
to top
>dbj|AP007154.1| Aspergillus oryzae RIB40 genomic DNA, SC001
          Length = 2005935

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 620    caaaagaaacgaacaaactgcaca 643
              |||||||||||||| |||||||||
Sbjct: 589433 caaaagaaacgaacgaactgcaca 589410
to top
>gb|AC023904.10| Homo sapiens chromosome 10 clone RP11-369L1, complete sequence
          Length = 190712

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 250    cattttccatcatcttgctt 269
              ||||||||||||||||||||
Sbjct: 183935 cattttccatcatcttgctt 183954
to top
>dbj|AK136108.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420457N10 product:SMAP-4 homolog
            [Homo sapiens], full insert sequence
          Length = 1848

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1007 tggtggataaaacaggcaag 1026
to top
>dbj|AK135235.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720442C10 product:SMAP-4 homolog [Homo sapiens],
            full insert sequence
          Length = 2984

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
to top
>dbj|AK152444.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length enriched
            library, clone:I830072G24 product:SMAP-4 homolog [Homo
            sapiens], full insert sequence
          Length = 1861

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1037 tggtggataaaacaggcaag 1056
to top
>dbj|AK166645.1| Mus musculus morula whole body morula cDNA, RIKEN full-length
           enriched library, clone:I0C0045G09 product:hypothetical
           protein, full insert sequence
          Length = 1228

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  tggtggataaaacaggcaag 71
           ||||||||||||||||||||
Sbjct: 407 tggtggataaaacaggcaag 426
to top
>dbj|AK159554.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched
            library, clone:I420023M03 product:SMAP-4 homolog [Homo
            sapiens], full insert sequence
          Length = 1582

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1043 tggtggataaaacaggcaag 1062
to top
>dbj|AK032688.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length
            enriched library, clone:6530433P22 product:CDNA FLJ14153
            FIS, CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 2961

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 983  tggtggataaaacaggcaag 1002
to top
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 238     tcaaactcaatccattttccatca 261
               ||||| ||||||||||||||||||
Sbjct: 3700412 tcaaattcaatccattttccatca 3700389
to top
>dbj|AK075859.1| Mus musculus adult male tongue cDNA, RIKEN full-length enriched
            library, clone:2310002C18 product:CDNA FLJ14153 FIS,
            CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 1866

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1045 tggtggataaaacaggcaag 1064
to top
>dbj|AK004586.1| Mus musculus adult male lung cDNA, RIKEN full-length enriched
            library, clone:1200003O06 product:CDNA FLJ14153 FIS,
            CLONE NT2RM1000092, WEAKLY SIMILAR TO MULTIDRUG
            RESISTANCE PROTEIN 2 homolog [Homo sapiens], full insert
            sequence
          Length = 2980

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 1016 tggtggataaaacaggcaag 1035
to top
>gb|AC084633.1|CBRG45G04 Caenorhabditis briggsae cosmid G45G04, complete sequence
          Length = 43840

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 369   agaatcagctttgtcaatgt 388
             ||||||||||||||||||||
Sbjct: 20958 agaatcagctttgtcaatgt 20977
to top
>gb|AC069553.6|AC069553 Genomic Sequence For Arabidopsis thaliana Clone F18A12 From Chromosome
             V, complete sequence
          Length = 133529

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 588   aaatctttgccttctggttt 607
             ||||||||||||||||||||
Sbjct: 23026 aaatctttgccttctggttt 23045
to top
>gb|AF188029.5| Homo sapiens chromosome 8 clone GS1-56L10 map p22-p21, complete
             sequence
          Length = 106784

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 191   ataatttcaaaatctcttcc 210
             ||||||||||||||||||||
Sbjct: 22803 ataatttcaaaatctcttcc 22822
to top
>gb|AC051625.6|AC051625 Genomic Sequence For Arabidopsis thaliana Clone F19N02 From Chromosome
             V, complete sequence
          Length = 116461

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 588   aaatctttgccttctggttt 607
             ||||||||||||||||||||
Sbjct: 11782 aaatctttgccttctggttt 11763
to top
>dbj|AK208838.1| Mus musculus cDNA, clone:Y2G0112O17, strand:plus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000029344, based on BLAT search
          Length = 175

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 52  tggtggataaaacaggcaag 71
           ||||||||||||||||||||
Sbjct: 132 tggtggataaaacaggcaag 151
to top
>gb|AY603631.1| Culicoides sonorensis clone Cssg00671A unknown salivary protein
           mRNA, partial cds
          Length = 543

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 72  gtgtgcacacaacttcagaaatat 95
           ||||||| ||||||||||||||||
Sbjct: 163 gtgtgcaaacaacttcagaaatat 186
to top
>dbj|AB046440.1| Arabidopsis thaliana DNA, chromosome 5 centromere region, clone:F5K15
          Length = 96684

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 588   aaatctttgccttctggttt 607
             ||||||||||||||||||||
Sbjct: 32358 aaatctttgccttctggttt 32377
to top
>gb|BC024891.1| Mus musculus major facilitator superfamily domain containing 1, mRNA
            (cDNA clone MGC:28238 IMAGE:3992247), complete cds
          Length = 3009

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   tggtggataaaacaggcaag 71
            ||||||||||||||||||||
Sbjct: 997  tggtggataaaacaggcaag 1016
to top
>emb|CT025698.13| Mouse DNA sequence from clone RP24-223P14 on chromosome 9, complete
             sequence
          Length = 193973

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   cactttctgcatctctcagc 498
             ||||||||||||||||||||
Sbjct: 59504 cactttctgcatctctcagc 59523
to top
>gb|AC102493.8| Mus musculus chromosome 8, clone RP24-546F2, complete sequence
          Length = 175883

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 453   cacctgtactttcaaaccaaactt 476
             ||||||||| ||||||||||||||
Sbjct: 51688 cacctgtaccttcaaaccaaactt 51711
to top
>emb|AL732627.14| Mouse DNA sequence from clone RP23-183L6 on chromosome 4, complete
             sequence
          Length = 202365

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 450   tttcacctgtactttcaaac 469
             ||||||||||||||||||||
Sbjct: 88707 tttcacctgtactttcaaac 88688
to top
>gb|AC135635.5| Mus musculus BAC clone RP23-245M20 from 3, complete sequence
          Length = 192485

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     tggtggataaaacaggcaag 71
              ||||||||||||||||||||
Sbjct: 106794 tggtggataaaacaggcaag 106813
to top
>emb|AL627123.13| Mouse DNA sequence from clone RP23-351I23 on chromosome 4, complete
              sequence
          Length = 185022

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 69     aaggtgtgcacacaacttca 88
              ||||||||||||||||||||
Sbjct: 110809 aaggtgtgcacacaacttca 110790
to top
>dbj|AB025906.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropane-1-carboxylate
            synthase, complete cds
          Length = 5264

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  tctcttcctcctttcgtatg 222
            ||||||||||||||||||||
Sbjct: 1525 tctcttcctcctttcgtatg 1544
to top
>dbj|AB032935.1| Cucumis melo CMe-ACS1 gene for 1-aminocyclopropane-1-carboxylate
            synthase, complete cds
          Length = 6241

 Score = 40.1 bits (20), Expect = 9.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 203  tctcttcctcctttcgtatg 222
            ||||||||||||||||||||
Sbjct: 2151 tctcttcctcctttcgtatg 2170


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,050,399
Number of Sequences: 3902068
Number of extensions: 7050399
Number of successful extensions: 129160
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128938
Number of HSP's gapped (non-prelim): 216
length of query: 677
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 654
effective length of database: 17,143,297,704
effective search space: 11211716698416
effective search space used: 11211716698416
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top