ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22h20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT009208.1| Triticum aestivum clone wle1n.pk0042.f7:fis, full... 789 0.0
2dbj|AB116073.1| Oryza sativa (japonica cultivar-group) mRNA for ... 462 e-127
3dbj|AK105977.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
4dbj|AK060518.1| Oryza sativa (japonica cultivar-group) cDNA clon... 462 e-127
5dbj|AK099107.1| Oryza sativa (japonica cultivar-group) cDNA clon... 454 e-124
6gb|AY104217.1| Zea mays PCO096065 mRNA sequence 365 9e-98
7gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 232 9e-58
8gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare str... 232 9e-58
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 232 9e-58
10ref|NM_100137.2| Arabidopsis thaliana CLPP5 (NUCLEAR ENCODED CLP... 137 4e-29
11emb|AJ012278.1|ATH012278 Arabidopsis thaliana mRNA for ATP-depen... 137 4e-29
12gb|BT024859.1| Arabidopsis thaliana At1g02560 gene, complete cds 137 4e-29
13emb|BX815808.1|CNS0ABFF Arabidopsis thaliana Full-length cDNA Co... 137 4e-29
14emb|BX841822.1|CNS09Y3C Arabidopsis thaliana Full-length cDNA Co... 137 4e-29
15gb|AY084394.1| Arabidopsis thaliana clone 106825 mRNA, complete ... 137 4e-29
16dbj|AB022326.1| Arabidopsis thaliana mRNA for nClpP1 (nuclear en... 137 4e-29
17emb|BX817257.1|CNS0ABP7 Arabidopsis thaliana Full-length cDNA Co... 113 6e-22
18gb|BT013194.1| Lycopersicon esculentum clone 134346R, mRNA sequence 88 3e-14
19emb|AJ308540.1|LES308540 Lycopersicon esculentum mRNA for Clp pr... 88 3e-14
20gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14... 72 2e-09
21emb|BX814663.1|CNS0ACAC Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
22emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; se... 58 3e-05
23gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete se... 56 1e-04
24gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 54 5e-04
25gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome 54 5e-04
26gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete... 50 0.007
27emb|BX814483.1|CNS0AC76 Arabidopsis thaliana Full-length cDNA Co... 50 0.007
28gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome 48 0.028
29emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; se... 48 0.028
30dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 48 0.028
31gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1... 48 0.028
32ref|XM_781799.1| PREDICTED: Strongylocentrotus purpuratus simila... 46 0.11
33ref|NM_123907.2| Arabidopsis thaliana CLPP4; endopeptidase Clp A... 44 0.44
34gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph... 44 0.44
35emb|CR628336.1| Legionella pneumophila str. Paris complete genome 44 0.44
36emb|AJ000930.1|ATJ000930 Arabidopsis thaliana, mRNA for nuclear-... 44 0.44
37gb|BT006321.1| Arabidopsis thaliana At5g45390 mRNA, complete cds 44 0.44
38gb|AY042832.1| Arabidopsis thaliana ATP-dependent Clp protease-l... 44 0.44
39emb|BX829967.1|CNS0A042 Arabidopsis thaliana Full-length cDNA Co... 44 0.44
40gb|AY087717.1| Arabidopsis thaliana clone 37901 mRNA, complete s... 44 0.44
41dbj|AB022329.1| Arabidopsis thaliana mRNA for nClpP4 (nuclear en... 44 0.44
42dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 44 0.44
43gb|CP000013.1| Borrelia garinii PBi, complete genome 42 1.7
44gb|CP000097.1| Synechococcus sp. CC9902, complete genome 42 1.7
45ref|NM_027290.1| Mus musculus minichromosome maintenance deficie... 42 1.7
46gb|BC064314.1| Mus musculus minichromosome maintenance deficient... 42 1.7
47gb|BC023236.1| Mus musculus minichromosome maintenance deficient... 42 1.7
48ref|XM_793459.1| PREDICTED: Strongylocentrotus purpuratus simila... 42 1.7
49emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segmen... 42 1.7
50gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswel... 42 1.7
51gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell... 42 1.7
52dbj|AK030780.1| Mus musculus 8 days embryo whole body cDNA, RIKE... 42 1.7
53gb|BC094576.1| Mus musculus minichromosome maintenance deficient... 42 1.7
54gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45... 42 1.7
55emb|AL928886.7| Mouse DNA sequence from clone RP23-267D10 on chr... 42 1.7
56emb|AL928662.5| Mouse DNA sequence from clone RP23-379M5 on chro... 42 1.7
57gb|L04961.1|MUSXISTA Mouse nuclear-localized inactive X-specific... 40 6.9
58ref|NR_001463.2| Mus musculus inactive X specific transcripts (X... 40 6.9
59ref|NR_001570.1| Mus musculus inactive X specific transcripts (X... 40 6.9
60gb|BC103768.1| Mus musculus cDNA clone IMAGE:30840270 40 6.9
61gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 6.9
62gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, comp... 40 6.9
63emb|CR931997.1| Corynebacterium jeikeium K411 complete genome 40 6.9
64gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome... 40 6.9
65gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome... 40 6.9
66gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complet... 40 6.9
67emb|AL109837.22|HS1128N12 Human DNA sequence from clone RP5-1128... 40 6.9
68emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 6.9
69gb|AC105933.2| Homo sapiens chromosome 3 clone RP11-454I5, compl... 40 6.9
70gb|AC092110.9| Homo sapiens 12 BAC RP11-287J11 (Roswell Park Can... 40 6.9
71ref|NM_065497.2| Caenorhabditis elegans R07E5.7 (R07E5.7) mRNA, ... 40 6.9
72dbj|AK034303.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 6.9
73gb|AC149389.1| Phakopsora pachyrhizi clone JGIAFNA-5B15, complet... 40 6.9
74ref|NM_177146.2| Mus musculus RIKEN cDNA 9330175E14 gene (933017... 40 6.9
75gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome... 40 6.9
76gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, comp... 40 6.9
77emb|Z32683.1|CER07E5 Caenorhabditis elegans Cosmid R07E5, comple... 40 6.9
78dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone... 40 6.9
79emb|AJ421479.1| Mus musculus X-inactivation center region; segme... 40 6.9
80emb|AL929473.7| Mouse DNA sequence from clone RP23-143P21 on chr... 40 6.9
81emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chr... 40 6.9 
>gb|BT009208.1| Triticum aestivum clone wle1n.pk0042.f7:fis, full insert mRNA
           sequence
          Length = 755

 Score =  789 bits (398), Expect = 0.0
 Identities = 486/513 (94%), Gaps = 3/513 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcttcataacacgaaattacaaaagcatctagccagactaatgaaaacagcgtgggtac 60
           ||||||| |||  ||||||||||||||||||||||||||||| ||||||||||||| |||
Sbjct: 650 agcttcagaacgtgaaattacaaaagcatctagccagactaacgaaaacagcgtgg-tac 592

                                                                       
Query: 61  aaacacagctccagaagatcacgacaaaaatgcttggagcagcagagatt--gtgcatga 118
           ||||||| |||||||||||||| ||||||||||||||||| ||| |||||  ||||| | 
Sbjct: 591 aaacacaactccagaagatcacaacaaaaatgcttggagcggcatagattttgtgcacgg 532

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           ||||||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||
Sbjct: 531 catggctaactggaagctggaagtggttgcagcgctttaagagggttcacgattactcca 472

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tcaataaggccatactcctttgcctccttcgcgctcatgaagaagtcacggtcagtatct 412

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 411 acattgatcttatccaggggctgcccagtgtggtatgctaggtatccgttcaagttggcc 352

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 292

                                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtg 418
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 291 ccaagaggctgatggatcattattcttgagttaggtaagctgtacctcttccctttcgtc 232

                                                                       
Query: 419 ccgccactaagtagaaaagcacccatacttgcagcaagtccaatacaaactgtggaaaca 478
           || || ||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct: 231 ccaccgctaagtagaaaagcacccatacttgcagcaagtccgatacaaactgtcgaaaca 172

                                            
Query: 479 tcaggcctaatatgcttcattgtatcaaatatg 511
           |||||||| ||||||||||||||||||||||||
Sbjct: 171 tcaggcctgatatgcttcattgtatcaaatatg 139
to top
>dbj|AB116073.1| Oryza sativa (japonica cultivar-group) mRNA for ATP-dependent
           protease, complete cds
          Length = 1188

 Score =  462 bits (233), Expect = e-127
 Identities = 353/393 (89%)
 Strand = Plus / Minus

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 948 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 889

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 888 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 829

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 828 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 769

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 768 ttgtgatgcagcatctcattagcctggatctcaagatcagtctcttgtccttgggctcct 709

                                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtg 418
           || ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 708 ccgagaggttgatggatcattattcttgagttaggtaagctgtatcgcttcccttttgtc 649

                                                                       
Query: 419 ccgccactaagtagaaaagcacccatacttgcagcaagtccaatacaaactgtggaaaca 478
           ||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ccagcactaagcagaaaagctcccatacttgcagcaagtccaatacaaactgtggaaaca 589

                                            
Query: 479 tcaggcctaatatgcttcattgtatcaaatatg 511
           ||||| || ||||||||||| || || ||||||
Sbjct: 588 tcaggtctgatatgcttcatcgtgtcgaatatg 556
to top
>dbj|AK105977.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-F08, full
           insert sequence
          Length = 1186

 Score =  462 bits (233), Expect = e-127
 Identities = 353/393 (89%)
 Strand = Plus / Minus

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 946 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 887

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 886 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 827

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 826 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 767

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 766 ttgtgatgcagcatctcattagcctggatctcaagatcagtctcttgtccttgggctcct 707

                                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtg 418
           || ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 706 ccgagaggttgatggatcattattcttgagttaggtaagctgtatcgcttcccttttgtc 647

                                                                       
Query: 419 ccgccactaagtagaaaagcacccatacttgcagcaagtccaatacaaactgtggaaaca 478
           ||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ccagcactaagcagaaaagctcccatacttgcagcaagtccaatacaaactgtggaaaca 587

                                            
Query: 479 tcaggcctaatatgcttcattgtatcaaatatg 511
           ||||| || ||||||||||| || || ||||||
Sbjct: 586 tcaggtctgatatgcttcatcgtgtcgaatatg 554
to top
>dbj|AK060518.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-B09, full
           insert sequence
          Length = 1143

 Score =  462 bits (233), Expect = e-127
 Identities = 353/393 (89%)
 Strand = Plus / Minus

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 903 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 844

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 843 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 784

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 783 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 724

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 723 ttgtgatgcagcatctcattagcctggatctcaagatcagtctcttgtccttgggctcct 664

                                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtg 418
           || ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 663 ccgagaggttgatggatcattattcttgagttaggtaagctgtatcgcttcccttttgtc 604

                                                                       
Query: 419 ccgccactaagtagaaaagcacccatacttgcagcaagtccaatacaaactgtggaaaca 478
           ||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 603 ccagcactaagcagaaaagctcccatacttgcagcaagtccaatacaaactgtggaaaca 544

                                            
Query: 479 tcaggcctaatatgcttcattgtatcaaatatg 511
           ||||| || ||||||||||| || || ||||||
Sbjct: 543 tcaggtctgatatgcttcatcgtgtcgaatatg 511
to top
>dbj|AK099107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031C24, full
           insert sequence
          Length = 1098

 Score =  454 bits (229), Expect = e-124
 Identities = 352/393 (89%)
 Strand = Plus / Minus

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           ||||||||||| ||||| ||||| |||||||| ||||| || ||||||  ||| ||||||
Sbjct: 881 catggctaactagaagcaggaagcggttgaagggctttaaggggattcgtgataactcca 822

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 821 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 762

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 761 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 702

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           ||||| |||||||||||||| |||||||||||||| || |||||||||||||||||||||
Sbjct: 701 ttgtgatgcagcatctcattagcctggatctcaagatcagtctcttgtccttgggctcct 642

                                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtg 418
           || ||||| ||||| ||||||||||||||||||||||||||||| | ||||||||| || 
Sbjct: 641 ccgagaggttgatggatcattattcttgagttaggtaagctgtatcgcttcccttttgtc 582

                                                                       
Query: 419 ccgccactaagtagaaaagcacccatacttgcagcaagtccaatacaaactgtggaaaca 478
           ||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 581 ccagcactaagcagaaaagctcccatacttgcagcaagtccaatacaaactgtggaaaca 522

                                            
Query: 479 tcaggcctaatatgcttcattgtatcaaatatg 511
           ||||| || ||||||||||| || || ||||||
Sbjct: 521 tcaggtctgatatgcttcatcgtgtcgaatatg 489
to top
>gb|AY104217.1| Zea mays PCO096065 mRNA sequence
          Length = 817

 Score =  365 bits (184), Expect = 9e-98
 Identities = 259/284 (91%)
 Strand = Plus / Minus

                                                                       
Query: 119 catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
           |||| ||||||||||||||||||||||||||| || ||||| ||||||| ||||||||||
Sbjct: 433 catgactaactggaagctggaagtggttgaagggccttgaggggattcatgattactcca 374

                                                                       
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
           || ||||||||||||||||| || || ||||||||||||||| |||||||||||||||||
Sbjct: 373 tcaataaggccatactcctttgcttctttcgcgctcatgaagtagtcacggtcagtatct 314

                                                                       
Query: 239 acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
           || ||||||||||||||||||||||| ||||||||||| |||||||| || ||||| |||
Sbjct: 313 accttgatcttatccaggggctgcccagtgtggtatgcaaggtatccatttaagttcgcc 254

                                                                       
Query: 299 ttgtggtgcagcatctcattggcctggatctcaaggtcggtctcttgtccttgggctcct 358
           |||||||||||||||||||||||||| |||||||| || ||||| ||||||||||| |||
Sbjct: 253 ttgtggtgcagcatctcattggcctgaatctcaagatcagtctcctgtccttgggcccct 194

                                                       
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctgta 402
           |||||||| ||||| |||||||| |||||||| |||||||||||
Sbjct: 193 ccaagaggttgatggatcattatccttgagtttggtaagctgta 150
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  232 bits (117), Expect = 9e-58
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                            
Query: 119      catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
                ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 10938830 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 10938889

                                                                            
Query: 179      tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
                || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 10938890 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 10938949

                                                                            
Query: 239      acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
                || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 10938950 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 10939009

                                         
Query: 299      ttgtggtgcagcatctcattggcct 323
                ||||| |||||||||||||| ||||
Sbjct: 10939010 ttgtgatgcagcatctcattagcct 10939034



 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                            
Query: 321      cctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatgaatcatta 380
                ||||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 10939250 cctggatctcaagatcagtctcttgtccttgggctcctccgagaggttgatggatcatta 10939309

                                                
Query: 381      ttcttgagttaggtaagctgtacctcttccct 412
                |||||||||||||||||||||| | |||||||
Sbjct: 10939310 ttcttgagttaggtaagctgtatcgcttccct 10939341



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                            
Query: 446      cttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgcttcattgtatca 505
                |||||||||||||||||||||||||||||||||||||| || ||||||||||| || || 
Sbjct: 10940122 cttgcagcaagtccaatacaaactgtggaaacatcaggtctgatatgcttcatcgtgtcg 10940181

                      
Query: 506      aatatg 511
                ||||||
Sbjct: 10940182 aatatg 10940187
to top
>gb|AC134769.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1145F05,
             from chromosome 3, complete sequence
          Length = 127348

 Score =  232 bits (117), Expect = 9e-58
 Identities = 183/205 (89%)
 Strand = Plus / Minus

                                                                         
Query: 119   catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
             ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 42199 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 42140

                                                                         
Query: 179   tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
             || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 42139 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 42080

                                                                         
Query: 239   acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
             || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 42079 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 42020

                                      
Query: 299   ttgtggtgcagcatctcattggcct 323
             ||||| |||||||||||||| ||||
Sbjct: 42019 ttgtgatgcagcatctcattagcct 41995



 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Minus

                                                                         
Query: 321   cctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatgaatcatta 380
             ||||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 41779 cctggatctcaagatcagtctcttgtccttgggctcctccgagaggttgatggatcatta 41720

                                             
Query: 381   ttcttgagttaggtaagctgtacctcttccct 412
             |||||||||||||||||||||| | |||||||
Sbjct: 41719 ttcttgagttaggtaagctgtatcgcttccct 41688



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Minus

                                                                         
Query: 446   cttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgcttcattgtatca 505
             |||||||||||||||||||||||||||||||||||||| || ||||||||||| || || 
Sbjct: 40907 cttgcagcaagtccaatacaaactgtggaaacatcaggtctgatatgcttcatcgtgtcg 40848

                   
Query: 506   aatatg 511
             ||||||
Sbjct: 40847 aatatg 40842
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  232 bits (117), Expect = 9e-58
 Identities = 183/205 (89%)
 Strand = Plus / Plus

                                                                            
Query: 119      catggctaactggaagctggaagtggttgaagtgctttgagaggattcacgattactcca 178
                ||||||||||| ||||| ||||| |||||||| ||||| || ||||||| ||| ||||||
Sbjct: 10936931 catggctaactagaagcaggaagcggttgaagggctttaaggggattcatgataactcca 10936990

                                                                            
Query: 179      tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtcagtatct 238
                || || || ||||||||||| ||||||||||||||||||||| | |||||||||||||||
Sbjct: 10936991 tcaattagaccatactcctttgcctccttcgcgctcatgaagtaatcacggtcagtatct 10937050

                                                                            
Query: 239      acattgatcttatccaggggctgcccggtgtggtatgctaggtatccgttcaagttggcc 298
                || ||||||||||| ||||||||||| |||||||||||||||||||| |||| ||| |||
Sbjct: 10937051 acgttgatcttatctaggggctgcccagtgtggtatgctaggtatccattcaggttagcc 10937110

                                         
Query: 299      ttgtggtgcagcatctcattggcct 323
                ||||| |||||||||||||| ||||
Sbjct: 10937111 ttgtgatgcagcatctcattagcct 10937135



 Score =  127 bits (64), Expect = 4e-26
 Identities = 85/92 (92%)
 Strand = Plus / Plus

                                                                            
Query: 321      cctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatgaatcatta 380
                ||||||||||||| || ||||||||||||||||||||||| ||||| ||||| |||||||
Sbjct: 10937351 cctggatctcaagatcagtctcttgtccttgggctcctccgagaggttgatggatcatta 10937410

                                                
Query: 381      ttcttgagttaggtaagctgtacctcttccct 412
                |||||||||||||||||||||| | |||||||
Sbjct: 10937411 ttcttgagttaggtaagctgtatcgcttccct 10937442



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 61/66 (92%)
 Strand = Plus / Plus

                                                                            
Query: 446      cttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgcttcattgtatca 505
                |||||||||||||||||||||||||||||||||||||| || ||||||||||| || || 
Sbjct: 10938223 cttgcagcaagtccaatacaaactgtggaaacatcaggtctgatatgcttcatcgtgtcg 10938282

                      
Query: 506      aatatg 511
                ||||||
Sbjct: 10938283 aatatg 10938288
to top
>ref|NM_100137.2| Arabidopsis thaliana CLPP5 (NUCLEAR ENCODED CLP PROTEASE 1);
            endopeptidase Clp AT1G02560 (CLPP5) mRNA, complete cds
          Length = 1313

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                        
Query: 134  gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
            |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 1002 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 943

                                                                        
Query: 194  tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
            || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 942  tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 883

                                                                        
Query: 254  aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
            |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 882  aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 823

                                                                        
Query: 314  tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
            ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 822  tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 763

                                                                        
Query: 374  atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
            |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 762  atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 703

                                                                        
Query: 434  aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
            ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 702  aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 643

                             
Query: 494  ttcattgtatcaaatat 510
             |||| ||||| |||||
Sbjct: 642  ctcatagtatcgaatat 626
to top
>emb|AJ012278.1|ATH012278 Arabidopsis thaliana mRNA for ATP-dependent Clp protease subunit
           (clpP)
          Length = 1001

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 913 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 854

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 853 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 794

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 793 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 734

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 733 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 674

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 673 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 614

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 613 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 554

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 553 ctcatagtatcgaatat 537
to top
>gb|BT024859.1| Arabidopsis thaliana At1g02560 gene, complete cds
          Length = 897

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 890 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 831

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 830 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 771

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 770 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 711

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 710 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 651

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 650 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 591

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 590 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 531

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 530 ctcatagtatcgaatat 514
to top
>emb|BX815808.1|CNS0ABFF Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZH04 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1185

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 976 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 917

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 916 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 857

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 856 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 797

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 796 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 737

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 736 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 677

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 676 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 617

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 616 ctcatagtatcgaatat 600
to top
>emb|BX841822.1|CNS09Y3C Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS43ZC08 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1127

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| | || ||| || || |||||||| ||||||
Sbjct: 963 gctgcaagtggctggagagctttaagagggtgcatgataacaccgtcgataagtccatac 904

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 903 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 844

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||||
Sbjct: 843 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatc 784

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 783 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 724

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 723 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 664

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 663 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 604

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 603 ctcatagtatcgaatat 587
to top
>gb|AY084394.1| Arabidopsis thaliana clone 106825 mRNA, complete sequence
          Length = 1302

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 991 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 932

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 931 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 872

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 871 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 812

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 811 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 752

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 751 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 692

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 691 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 632

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 631 ctcatagtatcgaatat 615
to top
>dbj|AB022326.1| Arabidopsis thaliana mRNA for nClpP1 (nuclear encoded ClpP1),
           complete cds
          Length = 1090

 Score =  137 bits (69), Expect = 4e-29
 Identities = 300/377 (79%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 943 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 884

                                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
           || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 883 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 824

                                                                       
Query: 254 aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
           |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 823 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 764

                                                                       
Query: 314 tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
           ||||| ||||| || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 763 tcatttgcctgaatgtcaatgtcggtttggccaccttgagctccaccaagcggctgatgg 704

                                                                       
Query: 374 atcattattcttgagttaggtaagctgtacctcttccctttcgtgccgccactaagtaga 433
           |||||||| |||||||| ||||  ||||| || || ||||| || ||  ||||||| |||
Sbjct: 703 atcattatccttgagtttggtagactgtatctttttcctttggttccagcactaagcaga 644

                                                                       
Query: 434 aaagcacccatacttgcagcaagtccaatacaaactgtggaaacatcaggcctaatatgc 493
           ||||| |||||||| ||||| || |||| |||||| ||||| ||||||||||  || |||
Sbjct: 643 aaagctcccatactagcagctagaccaacacaaacagtggacacatcaggccggatgtgc 584

                            
Query: 494 ttcattgtatcaaatat 510
            |||| ||||| |||||
Sbjct: 583 ctcatagtatcgaatat 567
to top
>emb|BX817257.1|CNS0ABP7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH9ZC01 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1133

 Score =  113 bits (57), Expect = 6e-22
 Identities = 177/217 (81%)
 Strand = Plus / Minus

                                                                       
Query: 266 gtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatctcattggcctgg 325
           ||||||||||| ||||| ||||| | ||| |||||||| |||||||| ||||| ||||| 
Sbjct: 841 gtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatttcatttgcctga 782

                                                                       
Query: 326 atctcaaggtcggtctcttgtccttgggctcctccaagaggctgatgaatcattattctt 385
           || |||| |||||| |     ||||| ||||| ||||| |||||||| |||||||| |||
Sbjct: 781 atgtcaatgtcggtttggccaccttgagctccaccaagcggctgatggatcattatcctt 722

                                                                       
Query: 386 gagttaggtaagctgtacctcttccctttcgtgccgccactaagtagaaaagcacccata 445
           ||||| ||||  ||||| || || ||||| || ||  ||||||| |||||||| ||||||
Sbjct: 721 gagtttggtagactgtatctttttcctttggttccagcactaagcagaaaagctcccata 662

                                                
Query: 446 cttgcagcaagtccaatacaaactgtggaaacatcag 482
           || ||||| || |||| |||||| ||||| |||||||
Sbjct: 661 ctagcagctagaccaacacaaacagtggacacatcag 625
to top
>gb|BT013194.1| Lycopersicon esculentum clone 134346R, mRNA sequence
          Length = 1161

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 362 agaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtgccg 421
           |||||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 703 agaggctggtgaatcattatccttgaatttggcaagctatatctcttccctttagtgcca 644

                                                   
Query: 422 ccactaagtagaaaagcacccatacttgcagcaagtccaa 461
            |||| || |||||||| |||||||||||||| |||||||
Sbjct: 643 gcactgagaagaaaagcccccatacttgcagcgagtccaa 604



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||||||||| ||||| |  ||||||| ||| || |||||||| || || |||
Sbjct: 931 gctgcaagtggttgaagggctttcattggattcatgatgacaccatcgattagcccgtac 872

                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatc 237
           ||||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct: 871 tccttagcttcctttgcgctcatgaaaaaatcacgatcagtatc 828
to top
>emb|AJ308540.1|LES308540 Lycopersicon esculentum mRNA for Clp protease 2 proteolytic subunit
           (clpP2 gene)
          Length = 1172

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 86/100 (86%)
 Strand = Plus / Minus

                                                                       
Query: 362 agaggctgatgaatcattattcttgagttaggtaagctgtacctcttccctttcgtgccg 421
           |||||||| ||||||||||| ||||| || || ||||| || ||||||||||| ||||| 
Sbjct: 712 agaggctggtgaatcattatccttgaatttggcaagctatatctcttccctttagtgcca 653

                                                   
Query: 422 ccactaagtagaaaagcacccatacttgcagcaagtccaa 461
            |||| || |||||||| |||||||||||||| |||||||
Sbjct: 652 gcactgagaagaaaagcccccatacttgcagcgagtccaa 613



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 87/104 (83%)
 Strand = Plus / Minus

                                                                       
Query: 134 gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
           |||| |||||||||||| ||||| |  ||||||| ||| || |||||||| || || |||
Sbjct: 940 gctgcaagtggttgaagggctttcattggattcatgatgacaccatcgattagcccgtac 881

                                                       
Query: 194 tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatc 237
           ||||| || ||||| ||||||||||| || ||||| ||||||||
Sbjct: 880 tccttagcttcctttgcgctcatgaaaaaatcacgatcagtatc 837
to top
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete
             sequence
          Length = 121668

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 153/192 (79%)
 Strand = Plus / Plus

                                                                         
Query: 134   gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
             |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 78040 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 78099

                                                                         
Query: 194   tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
             || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 78100 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 78159

                                                                         
Query: 254   aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
             |||   || || ||||||||||| ||||| ||||| | ||| |||||||| |||||||| 
Sbjct: 78160 aggctttgaccagtgtggtatgcgaggtaaccgtttaggtttgccttgtgatgcagcatt 78219

                         
Query: 314   tcattggcctgg 325
             ||||| ||||||
Sbjct: 78220 tcatttgcctgg 78231
to top
>emb|BX814663.1|CNS0ACAC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB88ZB06 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1448

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 205/262 (78%)
 Strand = Plus / Minus

                                                                        
Query: 134  gctggaagtggttgaagtgctttgagaggattcacgattactccatcgataaggccatac 193
            |||| |||||| || || ||||| ||||| |||| ||| || || |||||||| ||||||
Sbjct: 1322 gctgcaagtggctggagagctttaagagggttcatgataacaccgtcgataagtccatac 1263

                                                                        
Query: 194  tccttcgcctccttcgcgctcatgaagaagtcacggtcagtatctacattgatcttatcc 253
            || || || || || || ||||||||||| |||||||| || ||    || ||||| |||
Sbjct: 1262 tcttttgcttctttggcactcatgaagaaatcacggtctgtgtcctggtttatcttctcc 1203

                                                                        
Query: 254  aggggctgcccggtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatc 313
            |||   || || ||||||||||| ||| | ||||| | ||| || ||||| |||||||| 
Sbjct: 1202 aggctttgaccagtgtggtatgcgagggaaccgtttaggtttgcgttgtgatgcagcatt 1143

                                                                        
Query: 314  tcattggcctggatctcaaggtcggtctcttgtccttgggctcctccaagaggctgatga 373
            ||||| || || || |||| |||||| |     ||||| ||||| ||||| |||||||| 
Sbjct: 1142 tcatttgcgtgaatgtcaatgtcggtttgggcaccttgagctccaccaagcggctgatgg 1083

                                  
Query: 374  atcattattcttgagttaggta 395
            |||||||| |||||||| ||||
Sbjct: 1082 atcattatccttgagtttggta 1061
to top
>emb|BX572094.1| Prochlorococcus marinus MED4 complete genome; segment 5/5
          Length = 262202

 Score = 58.0 bits (29), Expect = 3e-05
 Identities = 94/113 (83%), Gaps = 2/113 (1%)
 Strand = Plus / Minus

                                                                          
Query: 342    cttgtccttgggctcctccaagaggctgatgaatcattattcttgagttaggt-aagctg 400
              |||| ||||| || |||||||| || || |||||||||||||| || |||||| ||||| 
Sbjct: 192266 cttggccttgagcacctccaagtggttggtgaatcattattctcgaattaggtaaagct- 192208

                                                                   
Query: 401    tacctcttccctttcgtgccgccactaagtagaaaagcacccatacttgcagc 453
               |||| ||||||||||  || |||||||| || || || ||||||||||||||
Sbjct: 192207 aaccttttccctttcgcccccccactaaggaggaatgcccccatacttgcagc 192155
to top
>gb|AC151956.5| Medicago truncatula clone mth2-52p17, complete sequence
          Length = 120704

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Minus

                                                                        
Query: 146  tgaagtgctttgagaggattcacgattactccatcgataaggccatactccttcgcctcc 205
            ||||| |||||||||||||||| ||| || |||||||| || ||||| || || || || 
Sbjct: 1396 tgaagagctttgagaggattcatgatgacaccatcgatgagtccatattctttggcttct 1337

                                            
Query: 206  ttcgcgctcatgaagaagtcacggtcagtatc 237
            || || |||||||| || |||||||| |||||
Sbjct: 1336 tttgcactcatgaaaaaatcacggtctgtatc 1305



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                     
Query: 359 ccaagaggctgatgaatcattattcttgagttaggtaagctg 400
           ||||| || |||||||||||||| |||||||| || ||||||
Sbjct: 481 ccaagtggttgatgaatcattatccttgagtttggcaagctg 440
to top
>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 48/55 (87%)
 Strand = Plus / Minus

                                                                      
Query: 342     cttgtccttgggctcctccaagaggctgatgaatcattattcttgagttaggtaa 396
               |||| ||||| || ||||||||||||||||||||||| || || || ||||||||
Sbjct: 1639353 cttgaccttgtgcacctccaagaggctgatgaatcatgatcctagaattaggtaa 1639299



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 356    cctccaagaggctgatgaatcattattcttga 387
              |||||||| || ||||||||||||||||||||
Sbjct: 695764 cctccaagtggttgatgaatcattattcttga 695733



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                             
Query: 355     tcctccaagaggctgatgaatcattattct 384
               ||||||||| || |||||||||||||||||
Sbjct: 1327959 tcctccaaggggttgatgaatcattattct 1327930
to top
>gb|CP000095.1| Prochlorococcus marinus str. NATL2A, complete genome
          Length = 1842899

 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                          
Query: 342     cttgtccttgggctcctccaagaggctgatgaatcattattct 384
               |||| ||||| ||||| |||||||| |||||||||||||||||
Sbjct: 1210301 cttgaccttgagctccaccaagaggttgatgaatcattattct 1210259



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                              
Query: 356    cctccaagaggctgatgaatcattattcttga 387
              ||||| || |||||||||||||||||||||||
Sbjct: 280480 cctcccagtggctgatgaatcattattcttga 280449



 Score = 44.1 bits (22), Expect = 0.44
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 431    agaaaagcacccatacttgcagcaagtccaatacaaac 468
              ||||| || |||||||||||||| ||||||| ||||||
Sbjct: 280405 agaaaggcgcccatacttgcagctagtccaacacaaac 280368
to top
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome
          Length = 2201561

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                            
Query: 342     cttgtccttgggctcctccaagaggctgatgaatcattattcttg 386
               |||||||||| || || |||||||| ||||||||||| |||||||
Sbjct: 2122474 cttgtccttgagcaccgccaagaggttgatgaatcataattcttg 2122518
to top
>emb|BX814483.1|CNS0AC76 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB76ZE01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1154

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                
Query: 266 gtgtggtatgctaggtatccgttcaagttggccttgtggtgcagcatctcatt 318
           ||||||||||||||||| ||||| | |||  ||||||| |||||||| |||||
Sbjct: 797 gtgtggtatgctaggtaaccgtttaggttttccttgtgatgcagcatttcatt 745



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 179 tcgataaggccatactccttcgcctccttcgcgctcatgaagaagtcacggtc 231
           |||||||| |||||||| || || || || || ||||||||||| ||||||||
Sbjct: 884 tcgataagtccatactcttttgcttctttggcactcatgaagaaatcacggtc 832
to top
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome
          Length = 2560265

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 179     tcgataaggccatactccttcgcc 202
               ||||||||||||||||||||||||
Sbjct: 1699485 tcgataaggccatactccttcgcc 1699508
to top
>emb|BX572092.1| Prochlorococcus marinus MED4 complete genome; segment 3/5
          Length = 348178

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 356  cctccaagaggctgatgaatcattattcttga 387
            ||||||||||| ||||||||||| ||||||||
Sbjct: 4944 cctccaagaggttgatgaatcatgattcttga 4913
to top
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 423     cactaagtagaaaagcacccatacttgc 450
               ||||||| ||||||||||||||||||||
Sbjct: 1470552 cactaaggagaaaagcacccatacttgc 1470525
to top
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome
          Length = 1751080

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 48/56 (85%)
 Strand = Plus / Minus

                                                                       
Query: 342     cttgtccttgggctcctccaagaggctgatgaatcattattcttgagttaggtaag 397
               |||| ||||| || || |||||||| || ||||||||||||||||| || ||||||
Sbjct: 1673735 cttgaccttgagcaccaccaagaggttggtgaatcattattcttgaatttggtaag 1673680



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 434    aaagcacccatacttgcagc 453
              ||||||||||||||||||||
Sbjct: 835557 aaagcacccatacttgcagc 835538
to top
>ref|XM_781799.1| PREDICTED: Strongylocentrotus purpuratus similar to Putative
           ATP-dependent Clp protease proteolytic subunit,
           mitochondrial precursor (Endopeptidase Clp) (LOC581816),
           mRNA
          Length = 774

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 365 ggctgatgaatcattattcttgagttaggta 395
           |||||||||| ||| ||||||||||||||||
Sbjct: 518 ggctgatgaaccatgattcttgagttaggta 488
to top
>ref|NM_123907.2| Arabidopsis thaliana CLPP4; endopeptidase Clp AT5G45390 (CLPP4)
           mRNA, complete cds
          Length = 1267

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 611 cctccaagaggttgatgaatcattat 586
to top
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 365     ggctgatgaatcattattcttgagttaggtaagc 398
               |||||||| ||||| | |||||||||||||||||
Sbjct: 2084450 ggctgatgtatcataactcttgagttaggtaagc 2084483
to top
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 365     ggctgatgaatcattattcttgagttaggtaagc 398
               |||||||| ||||| | |||||||||||||||||
Sbjct: 2069650 ggctgatgtatcataactcttgagttaggtaagc 2069683
to top
>emb|AJ000930.1|ATJ000930 Arabidopsis thaliana, mRNA for nuclear-encoded ClpP proteolytic
           subunit
          Length = 959

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 565 cctccaagaggttgatgaatcattat 540
to top
>gb|BT006321.1| Arabidopsis thaliana At5g45390 mRNA, complete cds
          Length = 879

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 563 cctccaagaggttgatgaatcattat 538
to top
>gb|AY042832.1| Arabidopsis thaliana ATP-dependent Clp protease-like protein
           (MFC19.5) mRNA, complete cds
          Length = 1186

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 608 cctccaagaggttgatgaatcattat 583
to top
>emb|BX829967.1|CNS0A042 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB4ZG01 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1107

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 559 cctccaagaggttgatgaatcattat 534
to top
>gb|AY087717.1| Arabidopsis thaliana clone 37901 mRNA, complete sequence
          Length = 1197

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 611 cctccaagaggttgatgaatcattat 586
to top
>dbj|AB022329.1| Arabidopsis thaliana mRNA for nClpP4 (nuclear encoded ClpP4),
           partial cds
          Length = 1183

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 356 cctccaagaggctgatgaatcattat 381
           ||||||||||| ||||||||||||||
Sbjct: 586 cctccaagaggttgatgaatcattat 561
to top
>dbj|AB018113.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MFC19
          Length = 85020

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 356   cctccaagaggctgatgaatcattat 381
             ||||||||||| ||||||||||||||
Sbjct: 16676 cctccaagaggttgatgaatcattat 16651
to top
>gb|CP000013.1| Borrelia garinii PBi, complete genome
          Length = 904246

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 364    aggctgatgaatcattattct 384
              |||||||||||||||||||||
Sbjct: 640277 aggctgatgaatcattattct 640257
to top
>gb|CP000097.1| Synechococcus sp. CC9902, complete genome
          Length = 2234828

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 214     catgaagaagtcacggtcagtatct 238
               ||||||||| |||||||||||||||
Sbjct: 1021983 catgaagaaatcacggtcagtatct 1021959
to top
>ref|NM_027290.1| Mus musculus minichromosome maintenance deficient 10 (S. cerevisiae)
            (Mcm10), mRNA
          Length = 3415

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   ttacaaaagcatctagccaga 38
            |||||||||||||||||||||
Sbjct: 1754 ttacaaaagcatctagccaga 1774
to top
>gb|BC064314.1| Mus musculus minichromosome maintenance deficient 10 (S. cerevisiae),
            mRNA (cDNA clone IMAGE:6826945)
          Length = 3879

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   ttacaaaagcatctagccaga 38
            |||||||||||||||||||||
Sbjct: 2172 ttacaaaagcatctagccaga 2192
to top
>gb|BC023236.1| Mus musculus minichromosome maintenance deficient 10 (S.
           cerevisiae), mRNA (cDNA clone IMAGE:4209759)
          Length = 2371

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 18  ttacaaaagcatctagccaga 38
           |||||||||||||||||||||
Sbjct: 671 ttacaaaagcatctagccaga 691
to top
>ref|XM_793459.1| PREDICTED: Strongylocentrotus purpuratus similar to Putative
           ATP-dependent Clp protease proteolytic subunit,
           mitochondrial precursor (Endopeptidase Clp) (LOC594006),
           mRNA
          Length = 462

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 365 ggctgatgaatcattattcttgagttagg 393
           |||||||||| ||| ||||||||||||||
Sbjct: 206 ggctgatgaaccatgattcttgagttagg 178
to top
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7
          Length = 348764

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 244   gatcttatccaggggctgcccggtgtggt 272
             |||||| ||||||||||| ||||||||||
Sbjct: 60391 gatcttgtccaggggctgaccggtgtggt 60419
to top
>gb|AC010008.5| Drosophila melanogaster 3L BAC RP98-13N15 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 158719

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   ttgaagtgctttgagaggatt 165
             |||||||||||||||||||||
Sbjct: 60087 ttgaagtgctttgagaggatt 60067
to top
>gb|AC093436.2| Drosophila melanogaster 3L BAC RP98-1O14 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163711

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   ttgaagtgctttgagaggatt 165
             |||||||||||||||||||||
Sbjct: 93011 ttgaagtgctttgagaggatt 92991
to top
>dbj|AK030780.1| Mus musculus 8 days embryo whole body cDNA, RIKEN full-length
            enriched library, clone:5730599C18 product:similar to
            MCM10 HOMOLOG [Homo sapiens], full insert sequence
          Length = 3415

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   ttacaaaagcatctagccaga 38
            |||||||||||||||||||||
Sbjct: 1754 ttacaaaagcatctagccaga 1774
to top
>gb|BC094576.1| Mus musculus minichromosome maintenance deficient 10 (S. cerevisiae),
            mRNA (cDNA clone MGC:106615 IMAGE:6853824), complete cds
          Length = 3522

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 18   ttacaaaagcatctagccaga 38
            |||||||||||||||||||||
Sbjct: 1809 ttacaaaagcatctagccaga 1829
to top
>gb|AE003540.3| Drosophila melanogaster chromosome 3L, section 45 of 83 of the complete
             sequence
          Length = 297381

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 145   ttgaagtgctttgagaggatt 165
             |||||||||||||||||||||
Sbjct: 61237 ttgaagtgctttgagaggatt 61217
to top
>emb|AL928886.7| Mouse DNA sequence from clone RP23-267D10 on chromosome X, complete
             sequence
          Length = 118425

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 338   gtctcttgtccttgggctcct 358
             |||||||||||||||||||||
Sbjct: 48021 gtctcttgtccttgggctcct 48041
to top
>emb|AL928662.5| Mouse DNA sequence from clone RP23-379M5 on chromosome 2, complete
             sequence
          Length = 116419

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 18    ttacaaaagcatctagccaga 38
             |||||||||||||||||||||
Sbjct: 20182 ttacaaaagcatctagccaga 20162
to top
>gb|L04961.1|MUSXISTA Mouse nuclear-localized inactive X-specific transcript (Xist) mRNA
          Length = 14739

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  aaggccatactccttcgcct 203
            ||||||||||||||||||||
Sbjct: 6817 aaggccatactccttcgcct 6836
to top
>ref|NR_001463.2| Mus musculus inactive X specific transcripts (Xist) on chromosome X
          Length = 17919

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  aaggccatactccttcgcct 203
            ||||||||||||||||||||
Sbjct: 6853 aaggccatactccttcgcct 6872
to top
>ref|NR_001570.1| Mus musculus inactive X specific transcripts (Xist) on chromosome X
          Length = 12251

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 184  aaggccatactccttcgcct 203
            ||||||||||||||||||||
Sbjct: 6853 aaggccatactccttcgcct 6872
to top
>gb|BC103768.1| Mus musculus cDNA clone IMAGE:30840270
          Length = 3136

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tctcattggcctggatctca 331
            ||||||||||||||||||||
Sbjct: 2502 tctcattggcctggatctca 2483
to top
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 431    agaaaagcacccatacttgc 450
              ||||||||||||||||||||
Sbjct: 691341 agaaaagcacccatacttgc 691322
to top
>gb|AC102358.5| Mus musculus chromosome 8, clone RP23-451H9, complete sequence
          Length = 202151

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   tctcattggcctggatctca 331
             ||||||||||||||||||||
Sbjct: 16166 tctcattggcctggatctca 16185
to top
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome
          Length = 2462499

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 311    atctcattggcctggatctcaaggtcgg 338
              ||||| |||||||||||||| |||||||
Sbjct: 661523 atctccttggcctggatctccaggtcgg 661496
to top
>gb|AC140441.3| Mus musculus BAC clone RP23-82A21 from chromosome 5, complete sequence
          Length = 177052

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 454    aagtccaatacaaactgtgg 473
              ||||||||||||||||||||
Sbjct: 142106 aagtccaatacaaactgtgg 142125
to top
>gb|AC128663.4| Mus musculus BAC clone RP24-263E2 from chromosome 8, complete
            sequence
          Length = 197679

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tctcattggcctggatctca 331
            ||||||||||||||||||||
Sbjct: 9797 tctcattggcctggatctca 9778
to top
>gb|AC121866.2| Mus musculus BAC clone RP24-114G1 from 8, complete sequence
          Length = 162835

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 312   tctcattggcctggatctca 331
             ||||||||||||||||||||
Sbjct: 61735 tctcattggcctggatctca 61754
to top
>emb|AL109837.22|HS1128N12 Human DNA sequence from clone RP5-1128N12 on chromosome 20 Contains the
             PGAM3P gene for phosphoglycerate mutase 3 pseudogene and a
             CpG island, complete sequence
          Length = 139214

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 29    tctagccagactaatgaaaa 48
             ||||||||||||||||||||
Sbjct: 15257 tctagccagactaatgaaaa 15276
to top
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 365     ggctgatgaatcattattcttgagttaggtaa 396
               |||||||| ||||| | |||||||||||||||
Sbjct: 2042729 ggctgatgtatcataactcttgagttaggtaa 2042760
to top
>gb|AC105933.2| Homo sapiens chromosome 3 clone RP11-454I5, complete sequence
          Length = 175370

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 463    acaaactgtggaaacatcag 482
              ||||||||||||||||||||
Sbjct: 118272 acaaactgtggaaacatcag 118253
to top
>gb|AC092110.9| Homo sapiens 12 BAC RP11-287J11 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 181207

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 145   ttgaagtgctttgagaggattcac 168
             |||| |||||||||||||||||||
Sbjct: 89399 ttgaggtgctttgagaggattcac 89422
to top
>ref|NM_065497.2| Caenorhabditis elegans R07E5.7 (R07E5.7) mRNA, complete cds
          Length = 735

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 19  tacaaaagcatctagccaga 38
           ||||||||||||||||||||
Sbjct: 709 tacaaaagcatctagccaga 690
to top
>dbj|AK034303.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length enriched
            library, clone:9330175E14 product:HYPOTHETICAL 4.5 KDA
            PROTEIN homolog [Homo sapiens], full insert sequence
          Length = 4394

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tctcattggcctggatctca 331
            ||||||||||||||||||||
Sbjct: 3784 tctcattggcctggatctca 3765
to top
>gb|AC149389.1| Phakopsora pachyrhizi clone JGIAFNA-5B15, complete sequence
          Length = 42171

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 142  tggttgaagtgctttgagag 161
            ||||||||||||||||||||
Sbjct: 1280 tggttgaagtgctttgagag 1261
to top
>ref|NM_177146.2| Mus musculus RIKEN cDNA 9330175E14 gene (9330175E14Rik), mRNA
          Length = 4394

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 312  tctcattggcctggatctca 331
            ||||||||||||||||||||
Sbjct: 3784 tctcattggcctggatctca 3765
to top
>gb|AC124387.5| Mus musculus BAC clone RP24-426N3 from chromosome 13, complete sequence
          Length = 159689

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 312    tctcattggcctggatctca 331
              ||||||||||||||||||||
Sbjct: 139635 tctcattggcctggatctca 139654
to top
>gb|AC119276.7| Mus musculus chromosome 5, clone RP24-459D3, complete sequence
          Length = 169072

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    aagtccaatacaaactgtgg 473
              ||||||||||||||||||||
Sbjct: 159941 aagtccaatacaaactgtgg 159922
to top
>emb|Z32683.1|CER07E5 Caenorhabditis elegans Cosmid R07E5, complete sequence
          Length = 32266

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 19    tacaaaagcatctagccaga 38
             ||||||||||||||||||||
Sbjct: 25311 tacaaaagcatctagccaga 25330
to top
>dbj|AP006137.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT37K17, TM0239,
             complete sequence
          Length = 106506

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 65/80 (81%)
 Strand = Plus / Plus

                                                                         
Query: 152   gctttgagaggattcacgattactccatcgataaggccatactccttcgcctccttcgcg 211
             ||||||||||||||||  || || ||||| || || ||||| || || || || || |||
Sbjct: 90467 gctttgagaggattcataatgacaccatctatgagtccatattctttggcttcttttgcg 90526

                                 
Query: 212   ctcatgaagaagtcacggtc 231
             |||||||| || ||||||||
Sbjct: 90527 ctcatgaaaaaatcacggtc 90546
to top
>emb|AJ421479.1| Mus musculus X-inactivation center region; segment 2/3
          Length = 252150

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    aaggccatactccttcgcct 203
              ||||||||||||||||||||
Sbjct: 113148 aaggccatactccttcgcct 113167
to top
>emb|AL929473.7| Mouse DNA sequence from clone RP23-143P21 on chromosome 4, complete
            sequence
          Length = 59619

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 14   gaaattacaaaagcatctag 33
            ||||||||||||||||||||
Sbjct: 9189 gaaattacaaaagcatctag 9170
to top
>emb|AL669964.18| Mouse DNA sequence from clone RP23-11P22 on chromosome X, complete
              sequence
          Length = 229724

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 184    aaggccatactccttcgcct 203
              ||||||||||||||||||||
Sbjct: 170532 aaggccatactccttcgcct 170513


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,176,307
Number of Sequences: 3902068
Number of extensions: 4176307
Number of successful extensions: 86065
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 85779
Number of HSP's gapped (non-prelim): 283
length of query: 511
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 488
effective length of database: 17,143,297,704
effective search space: 8365929279552
effective search space used: 8365929279552
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top