| Clone Name | rbags22h19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478770.1| Oryza sativa (japonica cultivar-group), mRNA Length = 3199 Score = 462 bits (233), Expect = e-127 Identities = 486/569 (85%), Gaps = 1/569 (0%) Strand = Plus / Minus Query: 112 tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 171 |||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048 Query: 172 aagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatcttt 231 ||| |||||||||| |||||| ||| |||| ||| | || |||| || || |||||| Sbjct: 3047 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 2988 Query: 232 tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 291 |||||||| |||| ||||||||| || || | ||| || || || |||||||||| |||| Sbjct: 2987 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 2928 Query: 292 gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 351 || || ||||||| ||| | ||||||||||||||||| || |||||||| |||| | Sbjct: 2927 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 2868 Query: 352 agtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctccccc 411 |||||||||||||| |||| |||| |||||||||||| ||||||| |||||||| ||| Sbjct: 2867 agtgcagcaacctccacttcttttcgatcaaatttcagagttccttccgaaatctctccc 2808 Query: 412 caaaagaatgctgattcctcccttatgttcttgtatttctcccgtttcatgtcaatgaca 471 || ||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| | Sbjct: 2807 cagaagaaagctgattcctctcttatattcttgtatttctccaacttcatgtcaatgaga 2748 Query: 472 gcattgacattactcttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatc 531 || || || |||||||||||||||| ||||||||||| || ||| || ||||||||||| Sbjct: 2747 gcgttcacgttactcttgaattctgtatcaggcatttggtatagagttccttcaaacatc 2688 Query: 532 ttgaggaaagcttcaaccctggcatccagattggatggatccttcacggttgactggatt 591 | |||||||||||||| || ||||||| |||| ||||||||||||||||||||||||| Sbjct: 2687 gtaaggaaagcttcaactctagcatccaagttggctggatccttcacggttgactggatt 2628 Query: 592 ataaattgcaacccacggactcctgaatcatttctctgtctaagcagtgctatgtaccca 651 ||||||||||| |||||||| |||||||||||| | ||||||||||||| |||||| ||| Sbjct: 2627 ataaattgcaaaccacggacacctgaatcatttttttgtctaagcagtgttatgtagcca 2568 Query: 652 agctgctcaacccgaacgtaattggtgaa 680 || ||||||| | |||||||||||||||| Sbjct: 2567 agttgctcaa-ctgaacgtaattggtgaa 2540
>dbj|AK100076.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001F09, full insert sequence Length = 3200 Score = 462 bits (233), Expect = e-127 Identities = 486/569 (85%), Gaps = 1/569 (0%) Strand = Plus / Minus Query: 112 tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 171 |||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 3107 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 3048 Query: 172 aagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatcttt 231 ||| |||||||||| |||||| ||| |||| ||| | || |||| || || |||||| Sbjct: 3047 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 2988 Query: 232 tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 291 |||||||| |||| ||||||||| || || | ||| || || || |||||||||| |||| Sbjct: 2987 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 2928 Query: 292 gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 351 || || ||||||| ||| | ||||||||||||||||| || |||||||| |||| | Sbjct: 2927 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 2868 Query: 352 agtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctccccc 411 |||||||||||||| |||| |||| |||||||||||| ||||||| |||||||| ||| Sbjct: 2867 agtgcagcaacctccacttcttttcgatcaaatttcagagttccttccgaaatctctccc 2808 Query: 412 caaaagaatgctgattcctcccttatgttcttgtatttctcccgtttcatgtcaatgaca 471 || ||||| ||||||||||| ||||| ||||||||||||||| ||||||||||||| | Sbjct: 2807 cagaagaaagctgattcctctcttatattcttgtatttctccaacttcatgtcaatgaga 2748 Query: 472 gcattgacattactcttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatc 531 || || || |||||||||||||||| ||||||||||| || ||| || ||||||||||| Sbjct: 2747 gcgttcacgttactcttgaattctgtatcaggcatttggtatagagttccttcaaacatc 2688 Query: 532 ttgaggaaagcttcaaccctggcatccagattggatggatccttcacggttgactggatt 591 | |||||||||||||| || ||||||| |||| ||||||||||||||||||||||||| Sbjct: 2687 gtaaggaaagcttcaactctagcatccaagttggctggatccttcacggttgactggatt 2628 Query: 592 ataaattgcaacccacggactcctgaatcatttctctgtctaagcagtgctatgtaccca 651 ||||||||||| |||||||| |||||||||||| | ||||||||||||| |||||| ||| Sbjct: 2627 ataaattgcaaaccacggacacctgaatcatttttttgtctaagcagtgttatgtagcca 2568 Query: 652 agctgctcaacccgaacgtaattggtgaa 680 || ||||||| | |||||||||||||||| Sbjct: 2567 agttgctcaa-ctgaacgtaattggtgaa 2540
>ref|XM_478769.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2997 Score = 408 bits (206), Expect = e-111 Identities = 480/570 (84%), Gaps = 1/570 (0%) Strand = Plus / Minus Query: 111 ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 170 ||||||||||||||||||| |||| || ||||||||||| |||||||||||||||||||| Sbjct: 2997 ctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcct 2938 Query: 171 gaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatctt 230 ||||||||||||||| |||||| ||| ||| ||||| | || |||| ||||| ||||| Sbjct: 2937 gaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatctt 2878 Query: 231 ttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctgg 290 ||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| ||| Sbjct: 2877 ttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtgg 2818 Query: 291 tgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctcccc 350 ||| || ||||||| ||||| |||||||| |||||||| || || || || |||| Sbjct: 2817 tgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccct 2758 Query: 351 cagtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctcccc 410 ||||||||||||||| || || ||||||||||||||||| ||||||| ||||| || Sbjct: 2757 cagtgcagcaacctccgcctcttttctatcaaatttcagagttccttccgaaatttcttt 2698 Query: 411 ccaaaagaatgctgattcctcccttatgttcttgtatttctcccgtttcatgtcaatgac 470 ||| ||||| ||||||||||| ||||| ||||||||||||||| | ||||||||||||| Sbjct: 2697 ccagaagaacgctgattcctctcttatattcttgtatttctccagcttcatgtcaatgag 2638 Query: 471 agcattgacattactcttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacat 530 |||||| || || |||||||| ||| |||||||||||| || ||| || |||||||||| Sbjct: 2637 agcattcacgttgctcttgaactcttcatcaggcatttggtatagagtcccttcaaacat 2578 Query: 531 cttgaggaaagcttcaaccctggcatccagattggatggatccttcacggttgactggat 590 || || |||||||| || ||| ||||||| || ||||||||||||||||||||||| || Sbjct: 2577 attaagaaaagcttccactctgtcatccaggtttgatggatccttcacggttgactgaat 2518 Query: 591 tataaattgcaacccacggactcctgaatcatttctctgtctaagcagtgctatgtaccc 650 ||| |||||||| || || || |||||||||||||| ||| |||||| || |||||| || Sbjct: 2517 tatgaattgcaatccccgaacacctgaatcatttctttgtgtaagcactgttatgtagcc 2458 Query: 651 aagctgctcaacccgaacgtaattggtgaa 680 ||| ||||||| | ||||| |||||||||| Sbjct: 2457 aagttgctcaa-ctgaacgcaattggtgaa 2429
>gb|AY107748.1| Zea mays PCO123054 mRNA sequence Length = 1762 Score = 357 bits (180), Expect = 3e-95 Identities = 459/552 (83%) Strand = Plus / Minus Query: 111 ctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcct 170 ||||||||||||||||||| | || || ||||||| ||||||||||| ||||||||||| Sbjct: 1677 ctatagcttcatctgaccaacgcctcccctgaatgatccatataaaggcctcgacctcct 1618 Query: 171 gaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatctt 230 ||||| | ||||||||||| | ||| ||||||||||| ||| || || || | Sbjct: 1617 gaagccataaatatcagttatctcacacgacggcggtggcggagcattttgcactatggt 1558 Query: 231 ttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctgg 290 ||||||||| | | |||||||||||| || | |||||| ||||| |||||||||| ||| Sbjct: 1557 ttcgtactcggcagaatggagaccaccgtacacttgtatactaagaatcttcttttgtgg 1498 Query: 291 tgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctcccc 350 ||| ||||||||||| || || ||||| ||| ||||||||||||||| ||||||| Sbjct: 1497 tgcattgaccttgacatgatcattgaagaagcctaccaactcttccttcttgagctccct 1438 Query: 351 cagtgcagcaacctctgcttcctttctatcaaatttcagtgttccttgagaaatctcccc 410 ||||||||||||||||||||| |||||||||||||| || ||||||| ||||||||| || Sbjct: 1437 cagtgcagcaacctctgcttcttttctatcaaatttgagggttccttcagaaatctctcc 1378 Query: 411 ccaaaagaatgctgattcctcccttatgttcttgtatttctcccgtttcatgtcaatgac 470 | ||||| |||||||| || | |||||| |||||||||||| ||||||| ||||| | Sbjct: 1377 atagaagaaagctgattcttcgcgtatgtttttgtatttctccagtttcatatcaataag 1318 Query: 471 agcattgacattactcttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacat 530 |||| | |||||||||||||| |||||||||| ||| | || | || ||||||||| Sbjct: 1317 agcacttacattactcttgaactctgcatcagacatattgtagacattgctttcaaacat 1258 Query: 531 cttgaggaaagcttcaaccctggcatccagattggatggatccttcacggttgactggat 590 ||||| ||| |||||| |||||||||||||| | ||||||||||| ||||||||||| Sbjct: 1257 gttgagaaaattttcaactctggcatccagattagcaggatccttcaccgttgactggat 1198 Query: 591 tataaattgcaacccacggactcctgaatcatttctctgtctaagcagtgctatgtaccc 650 ||||||||||||||||||||| |||||||||||||| || ||||| || |||||||| || Sbjct: 1197 tataaattgcaacccacggacacctgaatcatttctttgcctaagaagcgctatgtagcc 1138 Query: 651 aagctgctcaac 662 ||| |||||||| Sbjct: 1137 aagttgctcaac 1126
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 188 bits (95), Expect = 2e-44 Identities = 215/255 (84%) Strand = Plus / Plus Query: 110 cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 169 |||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||| Sbjct: 22885749 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 22885808 Query: 170 tgaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatct 229 |||||||||||||||| |||||| ||| ||| ||||| | || |||| ||||| |||| Sbjct: 22885809 tgaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatct 22885868 Query: 230 tttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctg 289 |||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| || Sbjct: 22885869 tttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtg 22885928 Query: 290 gtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccc 349 |||| || ||||||| ||||| |||||||| |||||||| || || || || |||| Sbjct: 22885929 gtgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccc 22885988 Query: 350 ccagtgcagcaacct 364 |||||||||||||| Sbjct: 22885989 tcagtgcagcaacct 22886003 Score = 168 bits (85), Expect = 2e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 112 tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 171 |||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 22902280 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 22902339 Query: 172 aagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatcttt 231 ||| |||||||||| |||||| ||| |||| ||| | || |||| || || |||||| Sbjct: 22902340 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 22902399 Query: 232 tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 291 |||||||| |||| ||||||||| || || | ||| || || || |||||||||| |||| Sbjct: 22902400 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 22902459 Query: 292 gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 351 || || ||||||| ||| | ||||||||||||||||| || |||||||| |||| | Sbjct: 22902460 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 22902519 Query: 352 agtgcagcaacct 364 ||||||||||||| Sbjct: 22902520 agtgcagcaacct 22902532 Score = 151 bits (76), Expect = 4e-33 Identities = 214/260 (82%) Strand = Plus / Plus Query: 105 gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 164 |||| |||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 22922081 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 22922140 Query: 165 cctcctgaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaac 224 ||||||||||||||||||||| |||||| ||| |||||||| | || | || ||||| Sbjct: 22922141 cctcctgaagctgaatatatcggttatttgataggaatgcggctgtggctcgtcgtgaac 22922200 Query: 225 aatcttttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttctt 284 | |||||||||||| || ||||||| || |||| |||||| || || |||||||| Sbjct: 22922201 taccttttcgtactcgttggtgtggagacggccgtagacttgtatactgagtatcttctt 22922260 Query: 285 ttctggtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaag 344 | |||||| || ||||||| |||||| |||||||| |||| ||| || ||||| || Sbjct: 22922261 tcgtggtgcattaactttgacatgattatcgaagaactcaatcagctcctctttcttgag 22922320 Query: 345 ctcccccagtgcagcaacct 364 |||| |||||||||||||| Sbjct: 22922321 atccctcagtgcagcaacct 22922340 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 368 cttcctttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgatt 427 |||| |||| |||||||||||| ||||||| |||||||| ||||| ||||| ||||||| Sbjct: 22902609 cttcttttcgatcaaatttcagagttccttccgaaatctctccccagaagaaagctgatt 22902668 Query: 428 cctcccttatgttcttgtatttctcccgtttcatgtcaatgacagcattgacattactct 487 |||| ||||| ||||||||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 22902669 cctctcttatattcttgtatttctccaacttcatgtcaatgagagcgttcacgttactct 22902728 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 373 tttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgattcctcc 432 ||||||||||||||||| ||||||| ||||| || ||| ||||| ||||||||||| Sbjct: 22886083 tttctatcaaatttcagagttccttccgaaatttctttccagaagaacgctgattcctct 22886142 Query: 433 cttatgttcttgtatttctcccgtttcatgtcaatgacagcatt 476 ||||| ||||||||||||||| | ||||||||||||| |||||| Sbjct: 22886143 cttatattcttgtatttctccagcttcatgtcaatgagagcatt 22886186 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 22903016 ccttcacggttgactggattataaattgcaaaccacggacacctgaatcatttct 22903070 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 373 tttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgattcctcc 432 ||||||||||||||||| ||||||| ||| ||||| | ||| ||||| ||||||||||| Sbjct: 22922419 tttctatcaaatttcagagttccttcagagatctctcgccagaagaaagctgattcctct 22922478 Query: 433 cttatgttcttgtatttctcc 453 ||||| ||||||||||||||| Sbjct: 22922479 cttatattcttgtatttctcc 22922499 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 ||||||| |||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 22922779 ccttcacagttgactggattgtaaattgcaagccacggacgcctgaatcatttct 22922833 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 ||||||||||| ||||||||||| || ||| || ||||||||||| | ||||||||||| Sbjct: 22902855 cttgaattctgtatcaggcatttggtatagagttccttcaaacatcgtaaggaaagcttc 22902914 Query: 546 aaccctggcatccagattggatggatcct 574 ||| || ||||||| |||| |||||||| Sbjct: 22902915 aactctagcatccaagttggctggatcct 22902943 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 |||||||||||||||| ||||| |||||||| || || || |||||||||||||| Sbjct: 22886503 ccttcacggttgactgaattatgaattgcaatccccgaacacctgaatcatttct 22886557 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 |||||||||| ||| ||||||| || ||| || ||||||||||||| || |||||||| Sbjct: 22922621 cttgaattctatatcgggcatttggtatagagttccttcaaacatcttaagaaaagcttc 22922680 Query: 546 aaccctggcatccagattggatggatcct 574 || |||||||| || |||| |||||||| Sbjct: 22922681 cactctggcatctaggttggctggatcct 22922709 Score = 58.0 bits (29), Expect = 4e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 628 tgtctaagcagtgctatgtacccaagctgctcaacccgaacgtaattggtgaa 680 ||||||||||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 22903200 tgtctaagcagtgttatgtagccaagttgctcaa-ctgaacgtaattggtgaa 22903251 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 |||||| ||| |||||||||||| || ||| || |||||||||| || || |||||||| Sbjct: 22886343 cttgaactcttcatcaggcatttggtatagagtcccttcaaacatattaagaaaagcttc 22886402 Query: 546 aaccctggcatccagattggatggatcct 574 || ||| ||||||| || |||||||||| Sbjct: 22886403 cactctgtcatccaggtttgatggatcct 22886431
>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1019_E02 Length = 121607 Score = 188 bits (95), Expect = 2e-44 Identities = 215/255 (84%) Strand = Plus / Plus Query: 110 cctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcc 169 |||||||||||||||||||| |||| || ||||||||||| ||||||||||||||||||| Sbjct: 79016 cctatagcttcatctgaccaacacctcccttgaatgaaccgtataaaggtctcgacctcc 79075 Query: 170 tgaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatct 229 |||||||||||||||| |||||| ||| ||| ||||| | || |||| ||||| |||| Sbjct: 79076 tgaagctgaatatatcggttatttgatacgagtgcggctgtggctcatcgtgaactatct 79135 Query: 230 tttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctg 289 |||||||||| |||| ||||||||| || || | ||| |||||||| || ||||||| || Sbjct: 79136 tttcgtactcggaggaatggagaccgccgtaaacttgaatgctaagaattttcttttgtg 79195 Query: 290 gtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccc 349 |||| || ||||||| ||||| |||||||| |||||||| || || || || |||| Sbjct: 79196 gtgcattaactttgacatgattattgaagaactcaatcaactcctctttattgagatccc 79255 Query: 350 ccagtgcagcaacct 364 |||||||||||||| Sbjct: 79256 tcagtgcagcaacct 79270 Score = 168 bits (85), Expect = 2e-38 Identities = 211/253 (83%) Strand = Plus / Plus Query: 112 tatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcgacctcctg 171 |||||||||||||||||| |||| || ||| ||||||||||||||||||||||||||||| Sbjct: 95547 tatagcttcatctgaccaacacctcccttgtatgaaccatataaaggtctcgacctcctg 95606 Query: 172 aagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaacaatcttt 231 ||| |||||||||| |||||| ||| |||| ||| | || |||| || || |||||| Sbjct: 95607 aagttgaatatatctgttatttgataggaatttggtcgtggctcatcgtggactatcttt 95666 Query: 232 tcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttcttttctggt 291 |||||||| |||| ||||||||| || || | ||| || || || |||||||||| |||| Sbjct: 95667 tcgtactccgaggaatggagaccgccgtaaacttgaatactgagtatcttcttttgtggt 95726 Query: 292 gcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaagctccccc 351 || || ||||||| ||| | ||||||||||||||||| || |||||||| |||| | Sbjct: 95727 gcattaactttgacatgattgttgaagaactctatcaactcctctttcttaagatccctc 95786 Query: 352 agtgcagcaacct 364 ||||||||||||| Sbjct: 95787 agtgcagcaacct 95799 Score = 151 bits (76), Expect = 4e-33 Identities = 214/260 (82%) Strand = Plus / Plus Query: 105 gttgtcctatagcttcatctgaccagcaccacctttgaatgaaccatataaaggtctcga 164 |||| |||||| ||||||||||||| ||| ||||||||||||||||||||||||||||| Sbjct: 115348 gttgacctataacttcatctgaccaatacctcctttgaatgaaccatataaaggtctcga 115407 Query: 165 cctcctgaagctgaatatatcagttattcgatgcgaatgcggtggcggaacatcatgaac 224 ||||||||||||||||||||| |||||| ||| |||||||| | || | || ||||| Sbjct: 115408 cctcctgaagctgaatatatcggttatttgataggaatgcggctgtggctcgtcgtgaac 115467 Query: 225 aatcttttcgtactcagaggcatggagaccaccatagatttgtatgctaaggatcttctt 284 | |||||||||||| || ||||||| || |||| |||||| || || |||||||| Sbjct: 115468 taccttttcgtactcgttggtgtggagacggccgtagacttgtatactgagtatcttctt 115527 Query: 285 ttctggtgcgccgaccttgacataattatcaaagaactctatcaactcttccttcttaag 344 | |||||| || ||||||| |||||| |||||||| |||| ||| || ||||| || Sbjct: 115528 tcgtggtgcattaactttgacatgattatcgaagaactcaatcagctcctctttcttgag 115587 Query: 345 ctcccccagtgcagcaacct 364 |||| |||||||||||||| Sbjct: 115588 atccctcagtgcagcaacct 115607 Score = 103 bits (52), Expect = 7e-19 Identities = 103/120 (85%) Strand = Plus / Plus Query: 368 cttcctttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgatt 427 |||| |||| |||||||||||| ||||||| |||||||| ||||| ||||| ||||||| Sbjct: 95876 cttcttttcgatcaaatttcagagttccttccgaaatctctccccagaagaaagctgatt 95935 Query: 428 cctcccttatgttcttgtatttctcccgtttcatgtcaatgacagcattgacattactct 487 |||| ||||| ||||||||||||||| ||||||||||||| ||| || || ||||||| Sbjct: 95936 cctctcttatattcttgtatttctccaacttcatgtcaatgagagcgttcacgttactct 95995 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Plus Query: 373 tttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgattcctcc 432 ||||||||||||||||| ||||||| ||||| || ||| ||||| ||||||||||| Sbjct: 79350 tttctatcaaatttcagagttccttccgaaatttctttccagaagaacgctgattcctct 79409 Query: 433 cttatgttcttgtatttctcccgtttcatgtcaatgacagcatt 476 ||||| ||||||||||||||| | ||||||||||||| |||||| Sbjct: 79410 cttatattcttgtatttctccagcttcatgtcaatgagagcatt 79453 Score = 93.7 bits (47), Expect = 7e-16 Identities = 53/55 (96%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 ||||||||||||||||||||||||||||||| |||||||| |||||||||||||| Sbjct: 96283 ccttcacggttgactggattataaattgcaaaccacggacacctgaatcatttct 96337 Score = 89.7 bits (45), Expect = 1e-14 Identities = 72/81 (88%) Strand = Plus / Plus Query: 373 tttctatcaaatttcagtgttccttgagaaatctccccccaaaagaatgctgattcctcc 432 ||||||||||||||||| ||||||| ||| ||||| | ||| ||||| ||||||||||| Sbjct: 115686 tttctatcaaatttcagagttccttcagagatctctcgccagaagaaagctgattcctct 115745 Query: 433 cttatgttcttgtatttctcc 453 ||||| ||||||||||||||| Sbjct: 115746 cttatattcttgtatttctcc 115766 Score = 77.8 bits (39), Expect = 4e-11 Identities = 51/55 (92%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 ||||||| |||||||||||| |||||||||| |||||||| |||||||||||||| Sbjct: 116046 ccttcacagttgactggattgtaaattgcaagccacggacgcctgaatcatttct 116100 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 ||||||||||| ||||||||||| || ||| || ||||||||||| | ||||||||||| Sbjct: 96122 cttgaattctgtatcaggcatttggtatagagttccttcaaacatcgtaaggaaagcttc 96181 Query: 546 aaccctggcatccagattggatggatcct 574 ||| || ||||||| |||| |||||||| Sbjct: 96182 aactctagcatccaagttggctggatcct 96210 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 572 ccttcacggttgactggattataaattgcaacccacggactcctgaatcatttct 626 |||||||||||||||| ||||| |||||||| || || || |||||||||||||| Sbjct: 79770 ccttcacggttgactgaattatgaattgcaatccccgaacacctgaatcatttct 79824 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 |||||||||| ||| ||||||| || ||| || ||||||||||||| || |||||||| Sbjct: 115888 cttgaattctatatcgggcatttggtatagagttccttcaaacatcttaagaaaagcttc 115947 Query: 546 aaccctggcatccagattggatggatcct 574 || |||||||| || |||| |||||||| Sbjct: 115948 cactctggcatctaggttggctggatcct 115976 Score = 58.0 bits (29), Expect = 4e-05 Identities = 48/53 (90%), Gaps = 1/53 (1%) Strand = Plus / Plus Query: 628 tgtctaagcagtgctatgtacccaagctgctcaacccgaacgtaattggtgaa 680 ||||||||||||| |||||| ||||| ||||||| | |||||||||||||||| Sbjct: 96467 tgtctaagcagtgttatgtagccaagttgctcaa-ctgaacgtaattggtgaa 96518 Score = 58.0 bits (29), Expect = 4e-05 Identities = 74/89 (83%) Strand = Plus / Plus Query: 486 cttgaattctgcatcaggcatttcgtgtagtgtgacttcaaacatcttgaggaaagcttc 545 |||||| ||| |||||||||||| || ||| || |||||||||| || || |||||||| Sbjct: 79610 cttgaactcttcatcaggcatttggtatagagtcccttcaaacatattaagaaaagcttc 79669 Query: 546 aaccctggcatccagattggatggatcct 574 || ||| ||||||| || |||||||||| Sbjct: 79670 cactctgtcatccaggtttgatggatcct 79698
>emb|AJ308542.2|LES308542 Lycopersicon esculentum mRNA for insulin degrading enzyme (ide gene) Length = 3305 Score = 46.1 bits (23), Expect = 0.15 Identities = 59/71 (83%) Strand = Plus / Minus Query: 424 gattcctcccttatgttcttgtatttctcccgtttcatgtcaatgacagcattgacatta 483 |||||||||| || ||||||| |||||| | ||||| ||||| | |||||||||||| Sbjct: 2646 gattcctcccgtaaattcttgtgtttctcaagcttcatatcaataagtgcattgacatta 2587 Query: 484 ctcttgaattc 494 |||||||||| Sbjct: 2586 ttcttgaattc 2576
>gb|AC136147.4| Mus musculus BAC clone RP23-18B3 from 8, complete sequence Length = 210916 Score = 46.1 bits (23), Expect = 0.15 Identities = 26/27 (96%) Strand = Plus / Minus Query: 330 ctcttccttcttaagctcccccagtgc 356 |||||||||||| |||||||||||||| Sbjct: 122213 ctcttccttcttcagctcccccagtgc 122187
>gb|AC166652.6| Mus musculus chromosome 8, clone RP24-129F24, complete sequence Length = 164098 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 2023 cagcaacctctgcttcctttct 2002
>gb|AC164531.9| Mus musculus chromosome 8, clone RP24-238M4, complete sequence Length = 163075 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 14178 cagcaacctctgcttcctttct 14199
>gb|AC148089.8| Mus musculus chromosome 8, clone RP24-366L10, complete sequence Length = 178426 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 134685 cagcaacctctgcttcctttct 134664
>gb|AC157609.6| Mus musculus chromosome 8, clone RP23-94H5, complete sequence Length = 239452 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 197254 cagcaacctctgcttcctttct 197275
>gb|AC161410.3| Mus musculus chromosome 8, clone RP23-399J5, complete sequence Length = 196119 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Minus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 140150 cagcaacctctgcttcctttct 140129
>gb|AC007112.6| Arabidopsis thaliana chromosome 2 clone F24C20 map mi398, complete sequence Length = 96371 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Minus Query: 368 cttcctttctatcaaatttcagtgtt 393 ||||||||||| |||||||||||||| Sbjct: 80396 cttcctttctagcaaatttcagtgtt 80371
>gb|AC161343.14| Mus musculus chromosome 8, clone RP23-468H22, complete sequence Length = 182668 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 90904 cagcaacctctgcttcctttct 90925 Score = 44.1 bits (22), Expect = 0.60 Identities = 22/22 (100%) Strand = Plus / Plus Query: 356 cagcaacctctgcttcctttct 377 |||||||||||||||||||||| Sbjct: 37719 cagcaacctctgcttcctttct 37740
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 44.1 bits (22), Expect = 0.60 Identities = 25/26 (96%) Strand = Plus / Plus Query: 68 aaaatacaagttgaatgtaaataaga 93 |||||||||||||||||||| ||||| Sbjct: 189037 aaaatacaagttgaatgtaattaaga 189062
>gb|AC149231.2| Pan troglodytes BAC clone CH251-481H1 from 7, complete sequence Length = 217836 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 tgaatatatcagttattcgat 196 ||||||||||||||||||||| Sbjct: 108877 tgaatatatcagttattcgat 108857
>gb|AC168205.7| Mus musculus chromosome 8, clone RP23-478P10, complete sequence Length = 174995 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 357 agcaacctctgcttcctttct 377 ||||||||||||||||||||| Sbjct: 146538 agcaacctctgcttcctttct 146558
>gb|AC147094.2| Pan troglodytes BAC clone RP43-52H15 from 7, complete sequence Length = 183596 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 tgaatatatcagttattcgat 196 ||||||||||||||||||||| Sbjct: 45647 tgaatatatcagttattcgat 45627
>ref|XM_950256.1| Theileria annulata strain Ankara hypothetical protein (TA18800) partial mRNA Length = 2007 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 369 ttcctttctatcaaatttcag 389 ||||||||||||||||||||| Sbjct: 1496 ttcctttctatcaaatttcag 1516
>gb|AC142338.1| Pan troglodytes BAC clone RP43-41H4 from 7, complete sequence Length = 186208 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tgaatatatcagttattcgat 196 ||||||||||||||||||||| Sbjct: 6103 tgaatatatcagttattcgat 6123
>gb|AC164154.2| Mus musculus chromosome 18, clone RP23-60G12, complete sequence Length = 238662 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 catttgtcccacacattattttctt 62 ||||||||||||||||| ||||||| Sbjct: 161413 catttgtcccacacattgttttctt 161437
>gb|AC164106.3| Mus musculus BAC clone RP23-445D20 from chromosome 18, complete sequence Length = 195721 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 38 catttgtcccacacattattttctt 62 ||||||||||||||||| ||||||| Sbjct: 98090 catttgtcccacacattgttttctt 98114
>gb|AC025586.4| Genomic sequence for Mus musculus, clone RP23-320C8, complete sequence Length = 185386 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 tcttgaattctgcatcaggca 505 ||||||||||||||||||||| Sbjct: 98023 tcttgaattctgcatcaggca 98003
>gb|AC090676.11| Homo sapiens 12 BAC RP11-654D6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 139802 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 329 actcttccttcttaagctccc 349 ||||||||||||||||||||| Sbjct: 106112 actcttccttcttaagctccc 106132
>gb|AC083875.1|AC083875 Homo sapiens chromosome 7 clone RP11-699P13, complete sequence Length = 150913 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 tgaatatatcagttattcgat 196 ||||||||||||||||||||| Sbjct: 108966 tgaatatatcagttattcgat 108986
>gb|AC091534.7| Homo sapiens 12 BAC RP11-404O18 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185576 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 aaaatacaagttgaatgtaaa 88 ||||||||||||||||||||| Sbjct: 180277 aaaatacaagttgaatgtaaa 180297
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 402 aatctccccccaaaagaatgc 422 ||||||||||||||||||||| Sbjct: 1077057 aatctccccccaaaagaatgc 1077077
>dbj|AP006351.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT04E21, TM0336, complete sequence Length = 113233 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 109 tcctatagcttcatctgacca 129 ||||||||||||||||||||| Sbjct: 799 tcctatagcttcatctgacca 779
>emb|AL672221.14| Mouse DNA sequence from clone RP23-57B14 on chromosome X, complete sequence Length = 189048 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tttctatcaaatttcagtgtt 393 ||||||||||||||||||||| Sbjct: 47938 tttctatcaaatttcagtgtt 47918
>emb|AL592422.11| Mouse DNA sequence from clone RP23-218O16 on chromosome 11, complete sequence Length = 205668 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 485 tcttgaattctgcatcaggca 505 ||||||||||||||||||||| Sbjct: 183003 tcttgaattctgcatcaggca 182983
>ref|NM_115484.2| Arabidopsis thaliana unknown protein AT3G56260 mRNA, complete cds Length = 1010 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 53 ttattttctttaggaaaaat 72 |||||||||||||||||||| Sbjct: 26 ttattttctttaggaaaaat 7
>gb|AC122313.4| Mus musculus BAC clone RP23-300N8 from chromosome 13, complete sequence Length = 224940 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 528 catcttgaggaaagcttcaa 547 |||||||||||||||||||| Sbjct: 107449 catcttgaggaaagcttcaa 107468
>gb|AC160527.9| Mus musculus chromosome 7, clone RP24-269P21, complete sequence Length = 161504 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 accatagatttgtatgctaaggat 278 ||||| |||||||||||||||||| Sbjct: 160293 accattgatttgtatgctaaggat 160316
>gb|AC165339.2| Mus musculus BAC clone RP24-116I9 from chromosome y, complete sequence Length = 170958 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ccttatgttcttgtatttct 451 |||||||||||||||||||| Sbjct: 7640 ccttatgttcttgtatttct 7621
>gb|AC093919.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1126_D01, complete sequence Length = 112761 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 ccacggactcctgaatcatt 623 |||||||||||||||||||| Sbjct: 93841 ccacggactcctgaatcatt 93860
>gb|AC144811.3| Mus musculus BAC clone RP24-369J17 from chromosome Y, complete sequence Length = 125442 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 432 ccttatgttcttgtatttct 451 |||||||||||||||||||| Sbjct: 113879 ccttatgttcttgtatttct 113860
>gb|AY261366.1| African swine fever virus isolate Warthog, complete genome Length = 186528 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 9426 tgactggattataaattgca 9407
>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome Length = 190773 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 10723 tgactggattataaattgca 10704
>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome Length = 185689 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 10916 tgactggattataaattgca 10897
>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome Length = 193886 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 12607 tgactggattataaattgca 12588
>gb|AC158136.11| Mus musculus chromosome 7, clone RP23-58I15, complete sequence Length = 250563 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 accatagatttgtatgctaaggat 278 ||||| |||||||||||||||||| Sbjct: 23601 accattgatttgtatgctaaggat 23624
>emb|CR974445.7| Pig DNA sequence from clone CH242-212D21 on chromosome 17, complete sequence Length = 195516 Score = 40.1 bits (20), Expect = 9.3 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Minus Query: 500 caggcatttcgtgtagtgtgacttcaaa 527 ||||||||||||| |||||||||||||| Sbjct: 43988 caggcatttcgtg-agtgtgacttcaaa 43962
>gb|AC145817.1| Pan troglodytes BAC clone RP43-6C4 from 7, complete sequence Length = 134049 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 agtgagaacatttgtcccac 49 |||||||||||||||||||| Sbjct: 85843 agtgagaacatttgtcccac 85862
>gb|AC140545.26| Medicago truncatula clone mth2-11g18, complete sequence Length = 129414 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 aaaaatacaagttgaatgtaaata 90 ||||||||||||||| |||||||| Sbjct: 77593 aaaaatacaagttgattgtaaata 77616
>emb|AL513475.13| Human DNA sequence from clone RP11-277I20 on chromosome 6 Contains part of the UTRN gene for utrophin (homologous to dystrophin) (DRP, DRP1, DMDL), a novel pseudogene similar to hypothetical protein HT023 and a novel pseudogene, complete sequence Length = 191752 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 175 ctgaatatatcagttattcgatgc 198 ||||||||||||||||||| |||| Sbjct: 141168 ctgaatatatcagttattctatgc 141191
>emb|AL138749.13| Human DNA sequence from clone RP11-289F5 on chromosome 9q21.31-22.1 Contains a novel gene, complete sequence Length = 186246 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 ttgacataattatcaaagaa 320 |||||||||||||||||||| Sbjct: 11931 ttgacataattatcaaagaa 11912
>gb|AC108510.3| Homo sapiens chromosome 7 clone RP11-98O9, complete sequence Length = 74746 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 agtgagaacatttgtcccac 49 |||||||||||||||||||| Sbjct: 31688 agtgagaacatttgtcccac 31669
>emb|AL163763.1|ATF18O21 Arabidopsis thaliana DNA chromosome 3, BAC clone F18O21 Length = 99492 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 ttattttctttaggaaaaat 72 |||||||||||||||||||| Sbjct: 71939 ttattttctttaggaaaaat 71958
>gb|AC100400.10| Mus musculus chromosome 15, clone RP23-134E16, complete sequence Length = 211743 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 325 atcaactcttccttcttaag 344 |||||||||||||||||||| Sbjct: 63085 atcaactcttccttcttaag 63066
>emb|AL589871.13| Mouse DNA sequence from clone RP23-391I11 on chromosome 13 Contains the 5' end of the gene for a novel serine (or cysteine) proteinase inhibitor clade B (Serpinb) or serine protease inhibitor (Spi) family member, the Spi12 and Spi6 genes for serine protease inhibitors 12 and 6, the the genes for serine (or cysteine) proteinase inhibitor clade B member 9b (Serpinb9b) and clade B (ovalbumin) member 1b (Serpinb1b), a serine protease inhibitor (Spi) pseudogene and a prohibitin (Phb) pseudogene, complete sequence Length = 217643 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 430 tcccttatgttcttgtattt 449 |||||||||||||||||||| Sbjct: 2500 tcccttatgttcttgtattt 2519
>gb|AC010997.12| Homo sapiens chromosome 10 clone RP11-399K21, complete sequence Length = 189639 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 422 ctgattcctcccttatgttc 441 |||||||||||||||||||| Sbjct: 86876 ctgattcctcccttatgttc 86895
>gb|AC090214.3| Homo sapiens chromosome 18, clone RP11-800G9, complete sequence Length = 95648 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 52 attattttctttaggaaaaa 71 |||||||||||||||||||| Sbjct: 32992 attattttctttaggaaaaa 32973
>gb|AC104260.5| Homo sapiens chromosome 15, clone CTD-2536I1, complete sequence Length = 191528 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 53 ttattttctttaggaaaaatacaa 76 |||||||||||| ||||||||||| Sbjct: 59280 ttattttctttaagaaaaatacaa 59303
>gb|AC175665.3| Mus musculus BAC clone RP24-408G24 from chromosome y, complete sequence Length = 172866 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 ccttatgttcttgtatttct 451 |||||||||||||||||||| Sbjct: 97020 ccttatgttcttgtatttct 97039
>gb|AC182392.2| Pan troglodytes BAC clone CH251-499D13 from chromosome 2, complete sequence Length = 159910 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 465 aatgacagcattgacattac 484 |||||||||||||||||||| Sbjct: 19466 aatgacagcattgacattac 19485
>dbj|AK015835.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930518P08 product:unclassifiable, full insert sequence Length = 1189 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 528 catcttgaggaaagcttcaa 547 |||||||||||||||||||| Sbjct: 503 catcttgaggaaagcttcaa 484
>gb|AE010299.1| Methanosarcina acetivorans str. C2A, complete genome Length = 5751492 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 323 ctatcaactcttccttcttaagct 346 |||||||||||||||| ||||||| Sbjct: 3029902 ctatcaactcttcctttttaagct 3029879
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 604 ccacggactcctgaatcatt 623 |||||||||||||||||||| Sbjct: 22139860 ccacggactcctgaatcatt 22139879
>gb|AC158937.4| Mus musculus chromosome 3, clone RP23-290L18, complete sequence Length = 196087 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ttcatgtcaatgacagcatt 476 |||||||||||||||||||| Sbjct: 33963 ttcatgtcaatgacagcatt 33982
>gb|AC023672.9| Homo sapiens BAC clone RP11-499I20 from 2, complete sequence Length = 127266 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 465 aatgacagcattgacattac 484 |||||||||||||||||||| Sbjct: 25657 aatgacagcattgacattac 25638
>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome Length = 190324 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 11548 tgactggattataaattgca 11529
>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome Length = 192714 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 12416 tgactggattataaattgca 12397
>gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1 (1983), complete genome Length = 187612 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 10027 tgactggattataaattgca 10008
>dbj|AB019235.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MMI9 Length = 81736 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 492 ttctgcatcaggcatttcgt 511 |||||||||||||||||||| Sbjct: 24670 ttctgcatcaggcatttcgt 24651
>gb|AF077255.1|AF077255 Littorina scutulata isolate Scut18 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077254.1|AF077254 Littorina scutulata isolate Scut17 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077253.1|AF077253 Littorina scutulata isolate Scut16 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077251.1|AF077251 Littorina scutulata isolate Scut14 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077249.1|AF077249 Littorina scutulata isolate Scut12 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077248.1|AF077248 Littorina scutulata isolate Scut11 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077247.1|AF077247 Littorina scutulata isolate Scut10 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077246.1|AF077246 Littorina scutulata isolate Scut9 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077244.1|AF077244 Littorina scutulata isolate Scut7 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077243.1|AF077243 Littorina scutulata isolate Scut6 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077242.1|AF077242 Littorina scutulata isolate Scut5 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077239.1|AF077239 Littorina scutulata isolate Scut2 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF077238.1|AF077238 Littorina scutulata isolate Scut1 cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF023609.1|AF023609 Littorina subrotundata cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF023608.1|AF023608 Littorina subrotundata cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|AF023607.1|AF023607 Littorina subrotundata cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 480 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>emb|AL357752.19| Human DNA sequence from clone RP13-26D14 on chromosome Xq13.2-21.1 Contains the 5' end of the KIF4A gene for kinesin family member 4A, gene FLJ21093, a novel gene, the ARR3 gene for arrestin 3, retinal (x-arrestin), the P2RY4 gene for pyrimidinergic receptor P2Y, G-protein coupled, 4, the gene for a novel protein similar to diacylglycerol O-acyltransferase 2 like 1 (DGAT2L1), a novel pseudogene, the 3' end of the gene for a novel protein similar to diacylglycerol O-acyltransferase homolog 2 (mouse) (DGAT2) and two CpG islands, complete sequence Length = 178868 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 aaatttcagtgttccttgag 400 |||||||||||||||||||| Sbjct: 87582 aaatttcagtgttccttgag 87601
>gb|U89697.1|OTU89697 Oxytricha trifallax DNA polymerase alpha gene, micronuclear sequence Length = 6500 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 214 acatcatgaacaatcttttc 233 |||||||||||||||||||| Sbjct: 2639 acatcatgaacaatcttttc 2658
>gb|AC073883.34| Mus musculus strain C57BL/6J chromosome 3 clone rp23-71e13, complete sequence Length = 213482 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 457 ttcatgtcaatgacagcatt 476 |||||||||||||||||||| Sbjct: 210940 ttcatgtcaatgacagcatt 210921
>gb|U46797.1|LHU46797 Littorina horikawai cytochrome b gene, mitochondrial gene encoding mitochondrial protein, partial cds Length = 671 Score = 40.1 bits (20), Expect = 9.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 61 tttaggaaaaatacaagttgaatg 84 |||||||||||||| ||||||||| Sbjct: 406 tttaggaaaaatactagttgaatg 429
>gb|M58155.1|ASVLIS57 African swine fever virus multigene families 360 and 110 Length = 13036 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 582 tgactggattataaattgca 601 |||||||||||||||||||| Sbjct: 9238 tgactggattataaattgca 9257
>gb|M23958.1|RATCARB12 Rat carboxypeptidase B gene, intron 9, middle region D Length = 1515 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 457 ttcatgtcaatgacagcatt 476 |||||||||||||||||||| Sbjct: 332 ttcatgtcaatgacagcatt 351
>emb|AL671331.6| Mouse DNA sequence from clone RP23-126C18 on chromosome X, complete sequence Length = 107095 Score = 40.1 bits (20), Expect = 9.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 tattttctttaggaaaaata 73 |||||||||||||||||||| Sbjct: 49501 tattttctttaggaaaaata 49520 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,554,290 Number of Sequences: 3902068 Number of extensions: 7554290 Number of successful extensions: 156829 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 87 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 156461 Number of HSP's gapped (non-prelim): 352 length of query: 680 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 657 effective length of database: 17,143,297,704 effective search space: 11263146591528 effective search space used: 11263146591528 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)