| Clone Name | rbags22h05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC ... | 133 | 4e-31 | 2 | RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC ... | 132 | 9e-31 | 3 | RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC ... | 125 | 1e-28 | 4 | PPSA_METJA (Q57962) Probable phosphoenolpyruvate synthase (EC 2.... | 30 | 7.8 |
|---|
>RHM1_ARATH (Q9SYM5) Probable rhamnose biosynthetic enzyme 1 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 669 Score = 133 bits (335), Expect = 4e-31 Identities = 64/78 (82%), Positives = 68/78 (87%) Frame = -3 Query: 631 NFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPEL 452 NFTNPGVVSHNEILEMYRDYI+P F W NF LEEQAKVIVAPRSNNE+D KLK EFPEL Sbjct: 592 NFTNPGVVSHNEILEMYRDYINPEFKWANFTLEEQAKVIVAPRSNNEMDASKLKKEFPEL 651 Query: 451 LSIKESLIKNVFKPNQKT 398 LSIKESLIK + PN+KT Sbjct: 652 LSIKESLIKYAYGPNKKT 669
>RHM3_ARATH (Q9LH76) Probable rhamnose biosynthetic enzyme 3 (EC 4.2.1.-) (EC| 1.1.1.-) Length = 664 Score = 132 bits (332), Expect = 9e-31 Identities = 61/78 (78%), Positives = 70/78 (89%) Frame = -3 Query: 631 NFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPEL 452 NFTNPGVVSHNEILEMY+ YI+P+F W NFNLEEQAKVIVAPRSNNE+D KL EFPE+ Sbjct: 587 NFTNPGVVSHNEILEMYKSYIEPDFKWSNFNLEEQAKVIVAPRSNNEMDGAKLSKEFPEM 646 Query: 451 LSIKESLIKNVFKPNQKT 398 LSIK+SLIK VF+PN++T Sbjct: 647 LSIKDSLIKYVFEPNKRT 664
>RHM2_ARATH (Q9LPG6) Probable rhamnose biosynthetic enzyme 2 (EC 4.2.1.-) (EC| 1.1.1.-) (RHAMNOSE BIOSYNTHESIS 2 protein) (NDP-rhamnose synthase) (MUCILAGE-MODIFIED4 protein) (UDP-L-rhamnose synthase MUM4) Length = 667 Score = 125 bits (314), Expect = 1e-28 Identities = 58/78 (74%), Positives = 68/78 (87%) Frame = -3 Query: 631 NFTNPGVVSHNEILEMYRDYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPEL 452 NFTNPGVVSHNEILEMY++YI+P F W NF +EEQAKVIVA RSNNE+D KL EFPE+ Sbjct: 590 NFTNPGVVSHNEILEMYKNYIEPGFKWSNFTVEEQAKVIVAARSNNEMDGSKLSKEFPEM 649 Query: 451 LSIKESLIKNVFKPNQKT 398 LSIKESL+K VF+PN++T Sbjct: 650 LSIKESLLKYVFEPNKRT 667
>PPSA_METJA (Q57962) Probable phosphoenolpyruvate synthase (EC 2.7.9.2)| (Pyruvate, water dikinase) (PEP synthase) [Contains: Mja pep intein (Mja pepA intein)] Length = 1188 Score = 29.6 bits (65), Expect = 7.8 Identities = 17/61 (27%), Positives = 29/61 (47%) Frame = -3 Query: 577 DYIDPNFSWKNFNLEEQAKVIVAPRSNNELDTVKLKTEFPELLSIKESLIKNVFKPNQKT 398 D+I ++ + + + +A NNEL + K + P +L + E +IK K KT Sbjct: 1071 DFIKEGINFVSLGTNDLTQYTIAIDRNNELVSKYYKEDHPAVLKLVEHVIKTCKKHGIKT 1130 Query: 397 S 395 S Sbjct: 1131 S 1131 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 96,618,109 Number of Sequences: 219361 Number of extensions: 2086677 Number of successful extensions: 4746 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4649 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4746 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5881538857 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)