ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22h05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
2dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
3dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic D... 168 1e-38
4dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clon... 168 1e-38
5gb|AF359122.1| Pinus sylvestris isolate plus tree E1101 putative... 92 3e-15
6gb|AF359121.1| Pinus sylvestris isolate plus tree E635C putative... 84 6e-13
7gb|AF051236.1|AF051236 Picea mariana hypothetical protein (Sb50)... 84 6e-13
8gb|AY088123.1| Arabidopsis thaliana clone 41505 mRNA, complete s... 70 1e-08
9ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPH... 66 2e-07
10ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / cataly... 66 2e-07
11ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / cat... 66 2e-07
12gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 geno... 66 2e-07
13gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,... 66 2e-07
14gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,... 66 2e-07
15emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Co... 66 2e-07
16ref|NM_104978.3| Arabidopsis thaliana NRS/ER (NUCLEOTIDE-RHAMNOS... 62 2e-06
17ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 ... 62 2e-06
18ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4)... 62 2e-06
19gb|AY513232.1| Arabidopsis thaliana 3,5-epimerase/4-reductase (N... 62 2e-06
20gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synt... 62 2e-06
21emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative ... 62 2e-06
22gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, comp... 62 2e-06
23gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, comp... 62 2e-06
24gb|AF332445.1| Arabidopsis thaliana clone C00141 (e) unknown pro... 62 2e-06
25gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, co... 62 2e-06
26gb|AF387005.1|AF387005 Arabidopsis thaliana Unknown protein (F16... 62 2e-06
27emb|BX817582.1|CNS0AEDB Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
28emb|BX815284.1|CNS0AAH5 Arabidopsis thaliana Full-length cDNA Co... 62 2e-06
29gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22... 62 2e-06
30gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thali... 62 2e-06
31gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis tha... 62 2e-06
32dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, ... 62 2e-06
33gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, co... 62 2e-06
34gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 60 9e-06
35gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete s... 60 9e-06
36gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 60 9e-06
37dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 60 9e-06
38dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
39dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 9e-06
40gb|AY103981.1| Zea mays PCO118173 mRNA sequence 60 9e-06
41gb|DQ378291.1| Drosophila virilis strain Tucson 15010-1001.10 ch... 44 0.55
42emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on ch... 44 0.55
43ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains... 42 2.2
44emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chr... 42 2.2
45dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
46gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nb... 42 2.2
47dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 2.2
48gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
49gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete... 40 8.6
50gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Canc... 40 8.6
51gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome... 40 8.6
52gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosom... 40 8.6
53gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, comple... 40 8.6
54emb|CR533575.5| Zebrafish DNA sequence from clone CH211-215M13 i... 40 8.6
55emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC... 40 8.6
56emb|AL161500.2|ATCHRIV12 Arabidopsis thaliana DNA chromosome 4, ... 40 8.6
57gb|AY279847.1| Pteragogus cryptus Tmo-4C4 (Tmo-4C4) gene, partia... 40 8.6
58gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, r... 40 8.6
59gb|AC128737.4| Mus musculus BAC clone RP23-99A8 from chromosome ... 40 8.6
60gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OAB... 40 8.6
61gb|AC155653.4| Mus musculus 6 BAC RP24-503P15 (Roswell Park Canc... 40 8.6
62emb|BX649615.6| Mouse DNA sequence from clone RP23-273I8 on chro... 40 8.6
63dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.6
64gb|AF076243.1|AF076243 Arabidopsis thaliana BAC T26N6 from chrom... 40 8.6
65gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32... 40 8.6
66gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete... 40 8.6
67gb|AY509272.1| Uncultured Flavobacteriales bacterium clone LiUU-... 40 8.6
68gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, com... 40 8.6
69gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosom... 40 8.6
70gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, compl... 40 8.6 
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                            
Query: 385      gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 444
                ||||||||||||| |||||||||||||| |||||||| |   | | ||| || |||||||
Sbjct: 27731238 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 27731179

                                                                            
Query: 445      ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 504
                |||||| ||||||||| || ||||  ||||  ||   |   ||||| ||||| ||||| |
Sbjct: 27731178 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 27731119

                                                                            
Query: 505      tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 564
                ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || |
Sbjct: 27731118 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 27731059

                                                                            
Query: 565      gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 624
                |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct: 27731058 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 27730999

                         
Query: 625      tgaagttcc 633
                |||| ||||
Sbjct: 27730998 tgaaattcc 27730990



 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 162      aggatacaatagcaacacca 181
                ||||||||||||||||||||
Sbjct: 18542704 aggatacaatagcaacacca 18542723
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>dbj|AP005823.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0663F07
          Length = 159046

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                         
Query: 385   gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 444
             ||||||||||||| |||||||||||||| |||||||| |   | | ||| || |||||||
Sbjct: 16571 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 16512

                                                                         
Query: 445   ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 504
             |||||| ||||||||| || ||||  ||||  ||   |   ||||| ||||| ||||| |
Sbjct: 16511 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 16452

                                                                         
Query: 505   tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 564
             ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || |
Sbjct: 16451 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 16392

                                                                         
Query: 565   gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 624
             |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct: 16391 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 16332

                      
Query: 625   tgaagttcc 633
             |||| ||||
Sbjct: 16331 tgaaattcc 16323
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>dbj|AP005775.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBb0005A04
          Length = 140723

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                          
Query: 385    gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 444
              ||||||||||||| |||||||||||||| |||||||| |   | | ||| || |||||||
Sbjct: 117104 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 117045

                                                                          
Query: 445    ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 504
              |||||| ||||||||| || ||||  ||||  ||   |   ||||| ||||| ||||| |
Sbjct: 117044 ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 116985

                                                                          
Query: 505    tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 564
              ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || |
Sbjct: 116984 tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 116925

                                                                          
Query: 565    gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 624
              |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct: 116924 gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 116865

                       
Query: 625    tgaagttcc 633
              |||| ||||
Sbjct: 116864 tgaaattcc 116856
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>dbj|AK071766.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111H09, full
            insert sequence
          Length = 1447

 Score =  168 bits (85), Expect = 1e-38
 Identities = 208/249 (83%)
 Strand = Plus / Minus

                                                                        
Query: 385  gtcaagccttggatgtcttctgatttggtttgaaaacgtttttgatcagcgactccttga 444
            ||||||||||||| |||||||||||||| |||||||| |   | | ||| || |||||||
Sbjct: 1051 gtcaagccttggacgtcttctgatttggcttgaaaacataccttaccagagaatccttga 992

                                                                        
Query: 445  ttgacagaagttctgggaactccgttttcaatttaacagtgtcaagttcattgttgctcc 504
            |||||| ||||||||| || ||||  ||||  ||   |   ||||| ||||| ||||| |
Sbjct: 991  ttgacaaaagttctggaaattccgccttcagcttggtacaatcaagctcattattgcttc 932

                                                                        
Query: 505  tcggtgctactatgaccttggcttgctcctccaagttgaagttcttccaggagaagtttg 564
            ||||||| ||||||||||||||||||||||||| | | ||||||||||| || || || |
Sbjct: 931  tcggtgcaactatgaccttggcttgctcctccagggtaaagttcttccaagaaaaattcg 872

                                                                        
Query: 565  gatcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattag 624
            |||| ||||||||||| ||||| |||| ||| ||||||||||||||||| ||||||||||
Sbjct: 871  gatcaatgtaatccctatacatttccaatatttcattgtggctcaccacgccaggattag 812

                     
Query: 625  tgaagttcc 633
            |||| ||||
Sbjct: 811  tgaaattcc 803
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>gb|AF359122.1| Pinus sylvestris isolate plus tree E1101 putative dTDP-glucose
           4,6-dehydratase gene, partial cds
          Length = 212

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 100/118 (84%)
 Strand = Plus / Minus

                                                                       
Query: 516 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 575
           ||||||||||| |||||||||| | |||| |||||||| |   || | ||||||||||| 
Sbjct: 143 atgaccttggcctgctcctccagggtgaaattcttccaagtatagctcggatcgatgtag 84

                                                                     
Query: 576 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
           ||||||||||||||||| |||||||||||||| || || ||||| || ||||| ||||
Sbjct: 83  tccctgtacatctccaggatctcattgtggctaacaaccccagggttcgtgaaattcc 26
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>gb|AF359121.1| Pinus sylvestris isolate plus tree E635C putative dTDP-glucose
           4,6-dehydratase gene, partial cds
          Length = 212

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                       
Query: 516 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 575
           ||||||||||| |||||||||| | |||| |||||||| |   || | ||||||||||| 
Sbjct: 143 atgaccttggcctgctcctccagggtgaaattcttccaagtatagctcggatcgatgtag 84

                                                                     
Query: 576 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
           ||||||||||||||||| ||||| |||||||| || || ||||| || ||||| ||||
Sbjct: 83  tccctgtacatctccaggatctcgttgtggctaacaaccccagggttcgtgaaattcc 26
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>gb|AF051236.1|AF051236 Picea mariana hypothetical protein (Sb50) mRNA, partial cds
          Length = 1139

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Minus

                                                                       
Query: 516 atgaccttggcttgctcctccaagttgaagttcttccaggagaagtttggatcgatgtaa 575
           ||||||||||| |||||||||| | |||| ||| |||| |   || | ||||||||||| 
Sbjct: 688 atgaccttggcctgctcctccagggtgaaattcctccaagtatagctcggatcgatgtag 629

                                                                     
Query: 576 tccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
           ||||||||||||||||| ||||| |||||||| ||||| ||||| || ||||| ||||
Sbjct: 628 tccctgtacatctccaggatctcgttgtggctaaccaccccagggttcgtgaaattcc 571
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>gb|AY088123.1| Arabidopsis thaliana clone 41505 mRNA, complete sequence
          Length = 1211

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 116/143 (81%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 878 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 819

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 818 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 759

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| |||||||||||
Sbjct: 758 ctcacaacacccggattagtgaa 736
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>ref|NM_106505.3| Arabidopsis thaliana ATTPS1 (TREHALOSE-6-PHOSPHATE SYNTHASE);
            transferase, transferring glycosyl groups AT1G78580
            (ATTPS1) mRNA, complete cds
          Length = 4635

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 3376 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 3435

                 
Query: 629  gttcc 633
            |||||
Sbjct: 3436 gttcc 3440
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>ref|NM_106504.2| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1)
            transcript variant AT1G78570.1 mRNA, complete cds
          Length = 2744

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 2011 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1952

                 
Query: 629  gttcc 633
            |||||
Sbjct: 1951 gttcc 1947
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>ref|NM_001036220.1| Arabidopsis thaliana RHM1; NAD binding / catalytic AT1G78570 (RHM1)
            transcript variant AT1G78570.2 mRNA, complete cds
          Length = 2912

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 2145 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 2086

                 
Query: 629  gttcc 633
            |||||
Sbjct: 2085 gttcc 2081
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>gb|AC007260.2| Arabidopsis thaliana chromosome I BAC T30F21 genomic sequence, complete
             sequence
          Length = 78378

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                         
Query: 569   gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
             |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 38715 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 38774

                  
Query: 629   gttcc 633
             |||||
Sbjct: 38775 gttcc 38779
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>gb|AY081471.1| Arabidopsis thaliana similar to dTDP-D-glucose 4,6-dehydratase
            (At1g78570) mRNA, complete cds
          Length = 2126

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 1836 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1777

                 
Query: 629  gttcc 633
            |||||
Sbjct: 1776 gttcc 1772
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>gb|AY042833.1| Arabidopsis thaliana Similar to dTDP-D-glucose 4,6-dehydratase
            (T30F21.10) mRNA, complete cds
          Length = 2347

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 2011 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1952

                 
Query: 629  gttcc 633
            |||||
Sbjct: 1951 gttcc 1947
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>emb|BX815784.1|CNS0AAK8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS94ZD06 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 2309

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 57/65 (87%)
 Strand = Plus / Minus

                                                                        
Query: 569  gatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtgaa 628
            |||||| || ||||||||||| || ||||| ||||||||||||||||| || || |||||
Sbjct: 2012 gatgtagtctctgtacatctctaggatctcgttgtggctcaccacacctgggtttgtgaa 1953

                 
Query: 629  gttcc 633
            |||||
Sbjct: 1952 gttcc 1948
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>ref|NM_104978.3| Arabidopsis thaliana NRS/ER (NUCLEOTIDE-RHAMNOSE
           SYNTHASE/EPIMERASE-REDUCTASE) AT1G63000 (NRS/ER) mRNA,
           complete cds
          Length = 1265

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 920 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 861

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 860 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 801

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| || ||||||||
Sbjct: 800 ctcacaacacccgggttagtgaa 778
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>ref|NM_112340.2| Arabidopsis thaliana RHM3; catalytic AT3G14790 (RHM3) mRNA, complete
            cds
          Length = 2332

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 626
            |||||||||  | |||||||||| | |||||| |||||||||||||| || ||||| |||
Sbjct: 1976 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1917

                   
Query: 627  aagttcc 633
            |||||||
Sbjct: 1916 aagttcc 1910
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>ref|NM_104228.3| Arabidopsis thaliana MUM4 (MUCILAGE-MODIFIED 4); catalytic AT1G53500
            (MUM4) mRNA, complete cds
          Length = 2526

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
            |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 2141 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 2095
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>gb|AY513232.1| Arabidopsis thaliana 3,5-epimerase/4-reductase (NRS/ER) mRNA,
           complete cds
          Length = 906

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 803 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 744

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 743 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 684

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| || ||||||||
Sbjct: 683 ctcacaacacccgggttagtgaa 661
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>gb|AY328518.1| Arabidopsis thaliana putative UDP-L-rhamnose synthase MUM4 (MUM4)
            mRNA, complete cds
          Length = 2479

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
            |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 2142 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 2096
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>emb|AJ565874.1|ATH565874 Arabidopsis thaliana mRNA for putative NDP-rhamnose synthase (rhm2
            gene)
          Length = 2004

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
            |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 1832 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 1786
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>gb|AY142060.1| Arabidopsis thaliana At3g14790/T21E2_4 mRNA, complete cds
          Length = 1995

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 626
            |||||||||  | |||||||||| | |||||| |||||||||||||| || ||||| |||
Sbjct: 1823 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1764

                   
Query: 627  aagttcc 633
            |||||||
Sbjct: 1763 aagttcc 1757
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>gb|AY078958.1| Arabidopsis thaliana AT3g14790/T21E2_4 mRNA, complete cds
          Length = 2332

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                        
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 626
            |||||||||  | |||||||||| | |||||| |||||||||||||| || ||||| |||
Sbjct: 1976 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 1917

                   
Query: 627  aagttcc 633
            |||||||
Sbjct: 1916 aagttcc 1910
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>gb|AF332445.1| Arabidopsis thaliana clone C00141 (e) unknown protein (At1g63000)
           mRNA, complete cds
          Length = 906

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 803 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 744

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 743 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 684

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| || ||||||||
Sbjct: 683 ctcacaacacccgggttagtgaa 661
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>gb|AY048277.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds
          Length = 1739

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
            |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 1402 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 1356
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>gb|AF387005.1|AF387005 Arabidopsis thaliana Unknown protein (F16P17.17) mRNA, complete cds
          Length = 1230

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 880 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 821

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 820 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 761

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| || ||||||||
Sbjct: 760 ctcacaacacccgggttagtgaa 738
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>emb|BX817582.1|CNS0AEDB Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL31ZC03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 525

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                          
Query: 567 tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
           |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 146 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 100
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>emb|BX815284.1|CNS0AAH5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS49ZH01 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1224

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                       
Query: 486 tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
           ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 920 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 861

                                                                       
Query: 546 ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
           |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 860 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 801

                                  
Query: 606 ctcaccacaccaggattagtgaa 628
           ||||| ||||| || ||||||||
Sbjct: 800 ctcacaacacccgggttagtgaa 778
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>gb|AC024260.4|AC024260 Arabidopsis thaliana chromosome 1 BAC F22G10 genomic sequence, complete
              sequence
          Length = 111936

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                             
Query: 567    tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
              |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 104856 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 104810
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>gb|AC018748.3|T3F20 Sequence of BAC T3F20 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 99960

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                            
Query: 567   tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
             |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 63762 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 63716
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>gb|AC011000.3|F16P17 Sequence of BAC F16P17 from Arabidopsis thaliana chromosome 1, complete
             sequence
          Length = 98412

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 115/143 (80%)
 Strand = Plus / Minus

                                                                         
Query: 486   tcaagttcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaag 545
             ||||| |||||||| ||||| || || || || || || ||||| ||||||||  |||||
Sbjct: 70123 tcaagctcattgttactccttggcgccacaatcactttagcttgttcctccaatgtgaag 70064

                                                                         
Query: 546   ttcttccaggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtgg 605
             |||||||| |  ||  | || || ||||| || |||||||||||||  ||||| ||||||
Sbjct: 70063 ttcttccaagtaaaactcgggtcaatgtagtctctgtacatctccaagatctcgttgtgg 70004

                                    
Query: 606   ctcaccacaccaggattagtgaa 628
             ||||| ||||| || ||||||||
Sbjct: 70003 ctcacaacacccgggttagtgaa 69981
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>dbj|AP002061.1| Arabidopsis thaliana genomic DNA, chromosome 3, BAC clone: T21E2
          Length = 47466

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 58/67 (86%)
 Strand = Plus / Minus

                                                                         
Query: 567   tcgatgtaatccctgtacatctccagtatctcattgtggctcaccacaccaggattagtg 626
             |||||||||  | |||||||||| | |||||| |||||||||||||| || ||||| |||
Sbjct: 10201 tcgatgtaactcttgtacatctctaatatctcgttgtggctcaccactcctggattggtg 10142

                    
Query: 627   aagttcc 633
             |||||||
Sbjct: 10141 aagttcc 10135
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>gb|BT002264.1| Arabidopsis thaliana At1g53500/F22G10_13 mRNA, complete cds
          Length = 1497

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 567  tcgatgtaatccctgtacatctccagtatctcattgtggctcaccac 613
            |||||||||| | |||||||||||| |||||| ||||||||||||||
Sbjct: 1325 tcgatgtaattcttgtacatctccaatatctcgttgtggctcaccac 1279
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 580     tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
               ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||
Sbjct: 9420169 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttcc 9420116
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>gb|AC182659.2| Populus trichocarpa clone Pop1-125A14, complete sequence
          Length = 75970

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                   
Query: 580   tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
             ||||||||||||  |||||||| |||||||| |||||||| || ||||||||||
Sbjct: 28633 tgtacatctccaaaatctcattatggctcacaacaccagggtttgtgaagttcc 28580



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                         
Query: 492   tcattgttgctcctcggtgctactatgaccttggcttgctcctc 535
             |||||||||||||  || || ||||| |||||||||||||||||
Sbjct: 28721 tcattgttgctccggggggcaactatcaccttggcttgctcctc 28678
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                    
Query: 580    tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
              ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||
Sbjct: 117569 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttcc 117516
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                     
Query: 580     tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
               ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||
Sbjct: 9418290 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttcc 9418237
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>dbj|AK103544.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132E05, full
            insert sequence
          Length = 2499

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 580  tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
            ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||
Sbjct: 1989 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttcc 1936
to top
>dbj|AK064303.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-B05, full
            insert sequence
          Length = 1892

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Minus

                                                                  
Query: 580  tgtacatctccagtatctcattgtggctcaccacaccaggattagtgaagttcc 633
            ||||||||||||| ||||| |||||||| || || |||||||| ||||||||||
Sbjct: 1380 tgtacatctccaggatctcgttgtggctgacaaccccaggattggtgaagttcc 1327
to top
>gb|AY103981.1| Zea mays PCO118173 mRNA sequence
          Length = 1418

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 114/142 (80%)
 Strand = Plus / Minus

                                                                        
Query: 492  tcattgttgctcctcggtgctactatgaccttggcttgctcctccaagttgaagttcttc 551
            ||||||||||| || ||||| ||||||||||||| |||||| || |   |||||||  ||
Sbjct: 1095 tcattgttgcttctaggtgcgactatgaccttggattgctcttcgagtgtgaagttggtc 1036

                                                                        
Query: 552  caggagaagtttggatcgatgtaatccctgtacatctccagtatctcattgtggctcacc 611
            ||    || |  |||| |||||| | | ||||||||||||| |||||||||||||| || 
Sbjct: 1035 cacttaaaatcaggattgatgtatttcttgtacatctccagaatctcattgtggctgaca 976

                                  
Query: 612  acaccaggattagtgaagttcc 633
            || ||||| || ||||||||||
Sbjct: 975  acgccagggttggtgaagttcc 954
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>gb|DQ378291.1| Drosophila virilis strain Tucson 15010-1001.10 chromosome 4 fosmid
             47B4, complete sequence
          Length = 37265

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 407   atttggtttgaaaacgtttttg 428
             ||||||||||||||||||||||
Sbjct: 14651 atttggtttgaaaacgtttttg 14672
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>emb|AL772303.11| Mouse DNA sequence from clone RP23-185P20 on chromosome 2, complete
             sequence
          Length = 202001

 Score = 44.1 bits (22), Expect = 0.55
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 398   tgtcttctgatttggtttgaaa 419
             ||||||||||||||||||||||
Sbjct: 28867 tgtcttctgatttggtttgaaa 28888
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>ref|NM_196493.1| Oryza sativa (japonica cultivar-group) contains similarity to histone
            acetyltransferase GCN5 (OSJNBa0032I20.6), mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 386  tcaagccttggatgtcttctg 406
            |||||||||||||||||||||
Sbjct: 1120 tcaagccttggatgtcttctg 1100
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>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a
             novel gene and a novel pseudogene, complete sequence
          Length = 119343

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 70    actttataaaaaatgatgcactcca 94
             |||||| ||||||||||||||||||
Sbjct: 46627 actttaaaaaaaatgatgcactcca 46651
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 386      tcaagccttggatgtcttctg 406
                |||||||||||||||||||||
Sbjct: 14038040 tcaagccttggatgtcttctg 14038060
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>gb|AF229187.1|AF229187 Oryza sativa subsp. japonica BAC clone nbxb0032I20, complete sequence
          Length = 144651

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 386   tcaagccttggatgtcttctg 406
             |||||||||||||||||||||
Sbjct: 54169 tcaagccttggatgtcttctg 54189
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>dbj|AK111779.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078H10, full
            insert sequence
          Length = 1691

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 386  tcaagccttggatgtcttctg 406
            |||||||||||||||||||||
Sbjct: 1235 tcaagccttggatgtcttctg 1215
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 386      tcaagccttggatgtcttctg 406
                |||||||||||||||||||||
Sbjct: 14046282 tcaagccttggatgtcttctg 14046302
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>gb|AC007692.5| Drosophila melanogaster clone BACR06O05, complete sequence
          Length = 184662

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     aaccgacaggcagcaacata 40
              ||||||||||||||||||||
Sbjct: 175255 aaccgacaggcagcaacata 175236
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>gb|AC153378.4| Mus musculus 6 BAC RP23-106C18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199980

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   ttgctcctccaagttgaagt 546
             ||||||||||||||||||||
Sbjct: 29217 ttgctcctccaagttgaagt 29198
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>gb|AC133514.4| Mus musculus BAC clone RP23-212F6 from chromosome 5, complete sequence
          Length = 208083

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 92     ccagttatgtgatagtacaa 111
              ||||||||||||||||||||
Sbjct: 151512 ccagttatgtgatagtacaa 151531
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>gb|AC123844.4| Mus musculus BAC clone RP23-416P14 from chromosome 7, complete sequence
          Length = 198721

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   gacaagggatggtgacttcc 230
             ||||||||||||||||||||
Sbjct: 48446 gacaagggatggtgacttcc 48465
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>gb|AC116659.3| Mus musculus BAC clone RP24-147E15 from 7, complete sequence
          Length = 140476

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 211   gacaagggatggtgacttcc 230
             ||||||||||||||||||||
Sbjct: 95685 gacaagggatggtgacttcc 95704
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>emb|CR533575.5| Zebrafish DNA sequence from clone CH211-215M13 in linkage group 16,
             complete sequence
          Length = 115032

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 580   tgtacatctccagtatctcattgt 603
             |||||||||||||| |||||||||
Sbjct: 26279 tgtacatctccagtttctcattgt 26256
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>emb|AL627362.2|CNS07TIX DNA centromeric region sequence from BAC DP15B03, DP38F06 of chromosome
             5 of Podospora anserina
          Length = 156244

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 519   accttggcttgctcctccaagttgaagttcttccag 554
             ||||||||||||||||| | | | ||||||||||||
Sbjct: 61190 accttggcttgctcctcgaggctaaagttcttccag 61225
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>emb|AL161500.2|ATCHRIV12 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 12
          Length = 199759

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 408    tttggtttgaaaacgtttttgatc 431
              |||||| |||||||||||||||||
Sbjct: 147969 tttggtatgaaaacgtttttgatc 147992
to top
>gb|AY279847.1| Pteragogus cryptus Tmo-4C4 (Tmo-4C4) gene, partial cds
          Length = 475

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 207 taatgacaagggatggtgac 226
           ||||||||||||||||||||
Sbjct: 114 taatgacaagggatggtgac 133
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>gb|AC007724.4|AC007724 Drosophila melanogaster, chromosome 3R, region 87B-87B, BAC clone
             BACR30N15, complete sequence
          Length = 178199

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aaccgacaggcagcaacata 40
             ||||||||||||||||||||
Sbjct: 18418 aaccgacaggcagcaacata 18399
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>gb|AC128737.4| Mus musculus BAC clone RP23-99A8 from chromosome unknown, complete
              sequence
          Length = 211960

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    tataagaaactatctcctgc 250
              ||||||||||||||||||||
Sbjct: 157626 tataagaaactatctcctgc 157645
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>gb|AC159742.1| Ornithorhynchus anatinus chromosome UNK clone OABb-263A1, complete
             sequence
          Length = 150582

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 102   gatagtacaatacaacagag 121
             ||||||||||||||||||||
Sbjct: 55765 gatagtacaatacaacagag 55746
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>gb|AC155653.4| Mus musculus 6 BAC RP24-503P15 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 136868

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 527  ttgctcctccaagttgaagt 546
            ||||||||||||||||||||
Sbjct: 1806 ttgctcctccaagttgaagt 1825
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>emb|BX649615.6| Mouse DNA sequence from clone RP23-273I8 on chromosome X, complete
             sequence
          Length = 88938

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   tataagaaactatctcctgc 250
             ||||||||||||||||||||
Sbjct: 76626 tataagaaactatctcctgc 76607
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>dbj|AP005299.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1789_D08
          Length = 128673

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 162   aggatacaatagcaacacca 181
             ||||||||||||||||||||
Sbjct: 83843 aggatacaatagcaacacca 83862
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>gb|AF076243.1|AF076243 Arabidopsis thaliana BAC T26N6 from chromosome IV at 19.3 cM, complete
             sequence
          Length = 99384

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 408   tttggtttgaaaacgtttttgatc 431
             |||||| |||||||||||||||||
Sbjct: 47623 tttggtatgaaaacgtttttgatc 47646
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>gb|AE003694.4| Drosophila melanogaster chromosome 3R, section 32 of 118 of the complete
              sequence
          Length = 226075

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 21     aaccgacaggcagcaacata 40
              ||||||||||||||||||||
Sbjct: 184216 aaccgacaggcagcaacata 184197
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>gb|AC006227.1|AC006227 Homo sapiens, clone hRPK.16_A_1, complete sequence
          Length = 153337

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   ctccatttggtcaagccttg 395
             ||||||||||||||||||||
Sbjct: 46501 ctccatttggtcaagccttg 46520
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>gb|AY509272.1| Uncultured Flavobacteriales bacterium clone LiUU-3-244 16S
           ribosomal RNA gene, partial sequence
          Length = 724

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 185 ggtgttctgtgtaataatct 204
           ||||||||||||||||||||
Sbjct: 680 ggtgttctgtgtaataatct 661
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>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence
          Length = 174120

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   cttggcttgctcctccaagt 540
             ||||||||||||||||||||
Sbjct: 12112 cttggcttgctcctccaagt 12093
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>gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosome 8, complete sequence
          Length = 152392

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   cttggcttgctcctccaagt 540
             ||||||||||||||||||||
Sbjct: 80394 cttggcttgctcctccaagt 80375
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>gb|AC127693.4| Mus musculus BAC clone RP23-135G19 from 17, complete sequence
          Length = 223894

 Score = 40.1 bits (20), Expect = 8.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 445    ttgacagaagttctgggaac 464
              ||||||||||||||||||||
Sbjct: 125189 ttgacagaagttctgggaac 125208


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,650,180
Number of Sequences: 3902068
Number of extensions: 5650180
Number of successful extensions: 132367
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131962
Number of HSP's gapped (non-prelim): 402
length of query: 633
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 610
effective length of database: 17,143,297,704
effective search space: 10457411599440
effective search space used: 10457411599440
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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