ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbaal0g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472912.1| Oryza sativa (japonica cultivar-group), predic... 131 3e-27
2dbj|AK100197.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
3dbj|AK099817.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 3e-27
4emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4,... 92 3e-15
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 92 3e-15
6emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 92 3e-15
7gb|AY111353.1| Zea mays CL37737_-1 mRNA sequence 78 4e-11
8emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on ch... 44 0.59
9gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, com... 42 2.3
10gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, comple... 42 2.3
11ref|NM_120071.1| Arabidopsis thaliana kinase AT4G39110 mRNA, com... 40 9.2
12gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p1... 40 9.2
13gb|AC107274.11| Rattus norvegicus 18 BAC CH230-207M17 (Children'... 40 9.2
14ref|XM_385392.1| Gibberella zeae PH-1 chromosome 3 hypothetical ... 40 9.2
15gb|AC131714.4| Mus musculus BAC clone RP23-179L6 from chromosome... 40 9.2
16ref|XM_737465.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 9.2
17gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete se... 40 9.2
18emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chr... 40 9.2
19gb|AC158934.4| Mus musculus chromosome 3, clone RP23-218L17, com... 40 9.2
20gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome... 40 9.2
21emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, ... 40 9.2
22emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BA... 40 9.2
23emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, B... 40 9.2
24gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, co... 40 9.2
25gb|AC023118.4|AC023118 Homo sapiens BAC clone RP11-277L22 from 1... 40 9.2
26gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, com... 40 9.2
27dbj|AP002751.3| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 9.2
28dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clo... 40 9.2
29emb|AL133368.6|CNS01DUT Human chromosome 14 DNA sequence BAC R-4... 40 9.2 
>ref|XM_472912.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2217

 Score =  131 bits (66), Expect = 3e-27
 Identities = 286/358 (79%), Gaps = 1/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
            ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 2159 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 2100

                                                                        
Query: 373  actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
            || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 2099 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 2040

                                                                        
Query: 433  ttgatctgaactgtcgtagctgaagaatcaactgtgcatctgatactgtcgagtgcgcca 492
            | |||||||| |||  |  ||||| ||||| ||||||   |||   | ||||| || |||
Sbjct: 2039 tggatctgaattgtgatctctgaacaatcacctgtgctcgtgacgttttcgagcgcacca 1980

                                                                        
Query: 493  cccggagttgaacatgtttagcagtccaagtggcgcaaacccaacagccccaccgtaaac 552
             || |||||| ||||||| | ||||||||| || ||||||  ||||   |||||  ||||
Sbjct: 1979 -cctgagttgtacatgttaaccagtccaagaggagcaaactgaacaaagccaccaaaaac 1921

                                                                        
Query: 553  ctgtatcggtgatatggtatagatctcacatgccatggtgaccaatgaaagctccaaact 612
            || |||| | | ||||||||| |||| ||||| ||| ||   ||| |||| ||||| | |
Sbjct: 1920 ctttatcagcgctatggtatatatcttacatgtcatagtagacaaggaaacctccatagt 1861

                                                                      
Query: 613  ttggtgcttctggagccttgatagagaacatgaattgaaagcatatactgcagtctct 670
             || |||||||| |||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 1860 ctgatgcttctgaagccttgagagagaacatgaattaaaagcaaatactgcagtctct 1803
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>dbj|AK100197.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023037L18, full
            insert sequence
          Length = 2606

 Score =  131 bits (66), Expect = 3e-27
 Identities = 286/358 (79%), Gaps = 1/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
            ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 2227 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 2168

                                                                        
Query: 373  actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
            || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 2167 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 2108

                                                                        
Query: 433  ttgatctgaactgtcgtagctgaagaatcaactgtgcatctgatactgtcgagtgcgcca 492
            | |||||||| |||  |  ||||| ||||| ||||||   |||   | ||||| || |||
Sbjct: 2107 tggatctgaattgtgatctctgaacaatcacctgtgctcgtgacgttttcgagcgcacca 2048

                                                                        
Query: 493  cccggagttgaacatgtttagcagtccaagtggcgcaaacccaacagccccaccgtaaac 552
             || |||||| ||||||| | ||||||||| || ||||||  ||||   |||||  ||||
Sbjct: 2047 -cctgagttgtacatgttaaccagtccaagaggagcaaactgaacaaagccaccaaaaac 1989

                                                                        
Query: 553  ctgtatcggtgatatggtatagatctcacatgccatggtgaccaatgaaagctccaaact 612
            || |||| | | ||||||||| |||| ||||| ||| ||   ||| |||| ||||| | |
Sbjct: 1988 ctttatcagcgctatggtatatatcttacatgtcatagtagacaaggaaacctccatagt 1929

                                                                      
Query: 613  ttggtgcttctggagccttgatagagaacatgaattgaaagcatatactgcagtctct 670
             || |||||||| |||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 1928 ctgatgcttctgaagccttgagagagaacatgaattaaaagcaaatactgcagtctct 1871
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>dbj|AK099817.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013100E13, full
            insert sequence
          Length = 2449

 Score =  131 bits (66), Expect = 3e-27
 Identities = 286/358 (79%), Gaps = 1/358 (0%)
 Strand = Plus / Minus

                                                                        
Query: 313  gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
            ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 2183 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 2124

                                                                        
Query: 373  actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
            || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 2123 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 2064

                                                                        
Query: 433  ttgatctgaactgtcgtagctgaagaatcaactgtgcatctgatactgtcgagtgcgcca 492
            | |||||||| |||  |  ||||| ||||| ||||||   |||   | ||||| || |||
Sbjct: 2063 tggatctgaattgtgatctctgaacaatcacctgtgctcgtgacgttttcgagcgcacca 2004

                                                                        
Query: 493  cccggagttgaacatgtttagcagtccaagtggcgcaaacccaacagccccaccgtaaac 552
             || |||||| ||||||| | ||||||||| || ||||||  ||||   |||||  ||||
Sbjct: 2003 -cctgagttgtacatgttaaccagtccaagaggagcaaactgaacaaagccaccaaaaac 1945

                                                                        
Query: 553  ctgtatcggtgatatggtatagatctcacatgccatggtgaccaatgaaagctccaaact 612
            || |||| | | ||||||||| |||| ||||| ||| ||   ||| |||| ||||| | |
Sbjct: 1944 ctttatcagcgctatggtatatatcttacatgtcatagtagacaaggaaacctccatagt 1885

                                                                      
Query: 613  ttggtgcttctggagccttgatagagaacatgaattgaaagcatatactgcagtctct 670
             || |||||||| |||||||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 1884 ctgatgcttctgaagccttgagagagaacatgaattaaaagcaaatactgcagtctct 1827
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>emb|AL606614.3|OSJN00047 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0011N17,
             complete sequence
          Length = 129498

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                         
Query: 313   gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
             ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 40519 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 40578

                                                                         
Query: 373   actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
             || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 40579 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 40638

                       
Query: 433   ttgatctgaa 442
             | ||||||||
Sbjct: 40639 tggatctgaa 40648



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 640   acatgaattgaaagcatatactgcagtctct 670
             ||||||||| |||||| ||||||||||||||
Sbjct: 41131 acatgaattaaaagcaaatactgcagtctct 41161
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                            
Query: 313      gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
                ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 24043540 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 24043599

                                                                            
Query: 373      actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
                || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 24043600 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 24043659

                          
Query: 433      ttgatctgaa 442
                | ||||||||
Sbjct: 24043660 tggatctgaa 24043669



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                               
Query: 640      acatgaattgaaagcatatactgcagtctct 670
                ||||||||| |||||| ||||||||||||||
Sbjct: 24044152 acatgaattaaaagcaaatactgcagtctct 24044182
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>emb|AL442104.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0510A06, complete
            sequence
          Length = 90767

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 109/130 (83%)
 Strand = Plus / Plus

                                                                        
Query: 313  gagagatcaaatgccagcaagccatcatcagaatgactgaactctacctcattcgcatca 372
            ||||||||||| ||||| ||||||||||| |  ||  |||||||||| |||| | |||||
Sbjct: 9782 gagagatcaaaggccaggaagccatcatctgtgtgtttgaactctacttcatgctcatca 9841

                                                                        
Query: 373  actctgcagagtgccggcctagcggatgaatacgccccaaaacgtcctggccctcggcat 432
            || ||||| | | ||||||| |  | ||||||||||||||| || |||||||||||||||
Sbjct: 9842 acactgcaaatttccggcctggttgctgaatacgccccaaaccgacctggccctcggcat 9901

                      
Query: 433  ttgatctgaa 442
            | ||||||||
Sbjct: 9902 tggatctgaa 9911



 Score = 46.1 bits (23), Expect = 0.15
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                            
Query: 640   acatgaattgaaagcatatactgcagtctct 670
             ||||||||| |||||| ||||||||||||||
Sbjct: 10393 acatgaattaaaagcaaatactgcagtctct 10423
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>gb|AY111353.1| Zea mays CL37737_-1 mRNA sequence
          Length = 619

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                       
Query: 399 tgaatacgccccaaaacgtcctggccctcggcatttgatctgaactgtcgtagctgaaga 458
           ||||||||||||||| || ||||| ||||||||| | || ||||||||||||||||||||
Sbjct: 280 tgaatacgccccaaaccgccctggtcctcggcatcttatatgaactgtcgtagctgaaga 339

              
Query: 459 atc 461
           |||
Sbjct: 340 atc 342



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 55/61 (90%)
 Strand = Plus / Plus

                                                                       
Query: 609 aactttggtgcttctggagccttgatagagaacatgaattgaaagcatatactgcagtct 668
           |||||||| | ||||| |||||||| ||||||||||||  ||||||||||||||||||||
Sbjct: 489 aactttggngtttctgaagccttgaaagagaacatgaaccgaaagcatatactgcagtct 548

            
Query: 669 c 669
           |
Sbjct: 549 c 549
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>emb|CT025674.13| Mouse DNA sequence from clone RP24-364I17 on chromosome 13, complete
             sequence
          Length = 117646

 Score = 44.1 bits (22), Expect = 0.59
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 274   atctctatgttcctgagtctgg 295
             ||||||||||||||||||||||
Sbjct: 29652 atctctatgttcctgagtctgg 29673
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>gb|AC115889.13| Mus musculus chromosome 3, clone RP24-409N2, complete sequence
          Length = 166218

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   ctggtgtgggaagatccatct 312
             |||||||||||||||||||||
Sbjct: 70958 ctggtgtgggaagatccatct 70938
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>gb|AC093887.3| Homo sapiens BAC clone RP11-667D12 from 4, complete sequence
          Length = 192886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 334   ccatcatcagaatgactgaac 354
             |||||||||||||||||||||
Sbjct: 57243 ccatcatcagaatgactgaac 57223
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>ref|NM_120071.1| Arabidopsis thaliana kinase AT4G39110 mRNA, complete cds
          Length = 2637

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 592  gaccaatgaaagctccaaac 611
            ||||||||||||||||||||
Sbjct: 1369 gaccaatgaaagctccaaac 1350
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>gb|AF241730.2| Homo sapiens chromosome X clone RP5-958I11 map p11.4, complete sequence
          Length = 128427

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   agagatcaaatgccagcaag 333
             ||||||||||||||||||||
Sbjct: 65713 agagatcaaatgccagcaag 65732
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>gb|AC107274.11| Rattus norvegicus 18 BAC CH230-207M17 (Children's Hospital Oakland
            Research Institute) complete sequence
          Length = 217066

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 293  tggtgtgggaagatccatct 312
            ||||||||||||||||||||
Sbjct: 1716 tggtgtgggaagatccatct 1697
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>ref|XM_385392.1| Gibberella zeae PH-1 chromosome 3 hypothetical protein (FG05216.1)
            partial mRNA
          Length = 5268

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 613  ttggtgcttctggagccttgatag 636
            |||||||||||| |||||||||||
Sbjct: 4858 ttggtgcttctgcagccttgatag 4835
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>gb|AC131714.4| Mus musculus BAC clone RP23-179L6 from chromosome 18, complete sequence
          Length = 193005

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 293   tggtgtgggaagatccatct 312
             ||||||||||||||||||||
Sbjct: 79578 tggtgtgggaagatccatct 79597
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>ref|XM_737465.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000685.01.0)
            partial mRNA
          Length = 2622

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 269  agagaatctctatgttcctg 288
            ||||||||||||||||||||
Sbjct: 2590 agagaatctctatgttcctg 2571
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>gb|AC145449.8| Medicago truncatula clone mth2-20m15, complete sequence
          Length = 122694

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 164   atataaacatcagtaattgg 183
             ||||||||||||||||||||
Sbjct: 22045 atataaacatcagtaattgg 22064
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>emb|AL359073.25| Human DNA sequence from clone RP11-432F4 on chromosome 9 Contains the
            5' end of the gene for regulator of differentiation 1
            (ROD1), a ribosomal protein L32 (RPL32) pseudogene and a
            CpG island.n, complete sequence
          Length = 64850

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 275  tctctatgttcctgagtctggtgt 298
            |||||||||| |||||||||||||
Sbjct: 9277 tctctatgttgctgagtctggtgt 9254
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>gb|AC158934.4| Mus musculus chromosome 3, clone RP23-218L17, complete sequence
          Length = 194631

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 293    tggtgtgggaagatccatct 312
              ||||||||||||||||||||
Sbjct: 129108 tggtgtgggaagatccatct 129089
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>gb|AC165083.2| Mus musculus BAC clone RP23-411I6 from chromosome 18, complete sequence
          Length = 208109

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tggtgtgggaagatccatct 312
             ||||||||||||||||||||
Sbjct: 53655 tggtgtgggaagatccatct 53636
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>emb|AL161594.2|ATCHRIV90 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 90
          Length = 198987

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 592    gaccaatgaaagctccaaac 611
              ||||||||||||||||||||
Sbjct: 137907 gaccaatgaaagctccaaac 137926
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>emb|AL050351.1|ATT22F8 Arabidopsis thaliana DNA chromosome 4, BAC clone T22F8 (ESSA project)
          Length = 89035

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 592  gaccaatgaaagctccaaac 611
            ||||||||||||||||||||
Sbjct: 6443 gaccaatgaaagctccaaac 6462
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>emb|AL035679.1|ATF19H22 Arabidopsis thaliana DNA chromosome 4, BAC clone F19H22 (ESSA project)
          Length = 100469

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 592   gaccaatgaaagctccaaac 611
             ||||||||||||||||||||
Sbjct: 99896 gaccaatgaaagctccaaac 99915
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>gb|AC021241.10| Homo sapiens chromosome 18, clone RP11-350K6, complete sequence
          Length = 160748

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 645   aattgaaagcatatactgca 664
             ||||||||||||||||||||
Sbjct: 79351 aattgaaagcatatactgca 79370
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>gb|AC023118.4|AC023118 Homo sapiens BAC clone RP11-277L22 from 11, complete sequence
          Length = 154330

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 110   gaagagtaattgtttctgaa 129
             ||||||||||||||||||||
Sbjct: 10886 gaagagtaattgtttctgaa 10867
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>gb|AC102844.11| Mus musculus chromosome 3, clone RP24-389H4, complete sequence
          Length = 199088

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 293  tggtgtgggaagatccatct 312
            ||||||||||||||||||||
Sbjct: 5977 tggtgtgggaagatccatct 5996
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>dbj|AP002751.3| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-682K9, complete
              sequence
          Length = 197847

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 110    gaagagtaattgtttctgaa 129
              ||||||||||||||||||||
Sbjct: 178221 gaagagtaattgtttctgaa 178202
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>dbj|AP001577.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB611H5
          Length = 144828

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 69    acatggtaagaaagaacata 88
             ||||||||||||||||||||
Sbjct: 63436 acatggtaagaaagaacata 63455
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>emb|AL133368.6|CNS01DUT Human chromosome 14 DNA sequence BAC R-436M15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 163272

 Score = 40.1 bits (20), Expect = 9.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    catcagaatgactgaactct 357
              ||||||||||||||||||||
Sbjct: 111617 catcagaatgactgaactct 111636


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,575,434
Number of Sequences: 3902068
Number of extensions: 5575434
Number of successful extensions: 159526
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 159378
Number of HSP's gapped (non-prelim): 142
length of query: 673
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 650
effective length of database: 17,143,297,704
effective search space: 11143143507600
effective search space used: 11143143507600
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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