ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22h03 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK100055.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157P15, full insert sequence Length = 2782 Score = 396 bits (200), Expect = e-107 Identities = 337/380 (88%), Gaps = 2/380 (0%) Strand = Plus / Minus Query: 223 ttaggctatggacgagttgtcggatgtcatctgcccaagaccatgtcggagggttgagag 282 ||||||||| | |||||| || || |||||| ||||||||||||||||| |||||| | Sbjct: 2567 ttaggctattaatgagttgccgaatatcatctacccaagaccatgtcggactgttgagtg 2508 Query: 283 ctcgtattgagttcaagcaaacgagaagggtccctccttcatggagaagaactgtcaacc 342 |||||||||||||||||||||||||||| || ||||| || || || || || ||||||| Sbjct: 2507 ctcgtattgagttcaagcaaacgagaagagttcctccctcgtgaagcagcaccgtcaacc 2448 Query: 343 aaagaggaagaaatcctaagacagaaggaagtgcagcaaaaacaatacaggttaaggcaa 402 |||||||||||||||| || |||||||||||||| |||||||||||||| | || |||| Sbjct: 2447 aaagaggaagaaatcccaaaacagaaggaagtgccgcaaaaacaatacaagacaatgcaa 2388 Query: 403 gagctacgctttgcttcaccaatgaagttgtttggcgagctttagcgatacaaaatggca 462 ||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 2387 gagctacactttgcttgaccaaagaagttgtttgacgagctttagctatacaaaatggca 2328 Query: 463 ccacacataaattatcctgcaacaacagaacatccgcaacagctacccgctgttgcactg 522 || |||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 2327 ccccacatatattatcctgcaacaaaagaacatctgcaacagcca-ccgctgttgcact- 2270 Query: 523 ggcgcgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttat 582 ||| || || |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 2269 ggcacgctgggctagaactataccaaccgttgcagctgcaagagctggtgcatcatttat 2210 Query: 583 accatcaccaaccattatta 602 ||||||||||||||||||| Sbjct: 2209 gccatcaccaaccattatta 2190
>dbj|AK058451.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-H01, full insert sequence Length = 1202 Score = 396 bits (200), Expect = e-107 Identities = 337/380 (88%), Gaps = 2/380 (0%) Strand = Plus / Minus Query: 223 ttaggctatggacgagttgtcggatgtcatctgcccaagaccatgtcggagggttgagag 282 ||||||||| | |||||| || || |||||| ||||||||||||||||| |||||| | Sbjct: 987 ttaggctattaatgagttgccgaatatcatctacccaagaccatgtcggactgttgagtg 928 Query: 283 ctcgtattgagttcaagcaaacgagaagggtccctccttcatggagaagaactgtcaacc 342 |||||||||||||||||||||||||||| || ||||| || || || || || ||||||| Sbjct: 927 ctcgtattgagttcaagcaaacgagaagagttcctccctcgtgaagcagcaccgtcaacc 868 Query: 343 aaagaggaagaaatcctaagacagaaggaagtgcagcaaaaacaatacaggttaaggcaa 402 |||||||||||||||| || |||||||||||||| |||||||||||||| | || |||| Sbjct: 867 aaagaggaagaaatcccaaaacagaaggaagtgccgcaaaaacaatacaagacaatgcaa 808 Query: 403 gagctacgctttgcttcaccaatgaagttgtttggcgagctttagcgatacaaaatggca 462 ||||||| |||||||| ||||| ||||||||||| ||||||||||| ||||||||||||| Sbjct: 807 gagctacactttgcttgaccaaagaagttgtttgacgagctttagctatacaaaatggca 748 Query: 463 ccacacataaattatcctgcaacaacagaacatccgcaacagctacccgctgttgcactg 522 || |||||| ||||||||||||||| |||||||| |||||||| | ||||||||||||| Sbjct: 747 ccccacatatattatcctgcaacaaaagaacatctgcaacagcca-ccgctgttgcact- 690 Query: 523 ggcgcgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttat 582 ||| || || |||||||| |||||||| |||||||||||||||||||||||||||||||| Sbjct: 689 ggcacgctgggctagaactataccaaccgttgcagctgcaagagctggtgcatcatttat 630 Query: 583 accatcaccaaccattatta 602 ||||||||||||||||||| Sbjct: 629 gccatcaccaaccattatta 610
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 220 bits (111), Expect = 4e-54 Identities = 167/183 (91%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 420 accaatgaagttgtttggcgagctttagcgatacaaaatggcaccacacataaattatcc 479 ||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 28406641 accaaagaagttgtttgacgagctttagctatacaaaatggcaccccacatatattatcc 28406700 Query: 480 tgcaacaacagaacatccgcaacagctacccgctgttgcactgggcgcgttgtgctagaa 539 |||||||| |||||||| |||||||| ||| ||||||||||||| | || || ||||||| Sbjct: 28406701 tgcaacaaaagaacatctgcaacagccacc-gctgttgcactgg-cacgctgggctagaa 28406758 Query: 540 caataccaactgttgcagctgcaagagctggtgcatcatttataccatcaccaaccatta 599 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 28406759 ctataccaaccgttgcagctgcaagagctggtgcatcatttatgccatcaccaaccatta 28406818 Query: 600 tta 602 ||| Sbjct: 28406819 tta 28406821 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 336 gtcaaccaaagaggaagaaatcctaagacagaaggaagtgcagcaaaaacaatacaggtt 395 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 28406463 gtcaaccaaagaggaagaaatcccaaaacagaaggaagtgccgcaaaaacaatacaagac 28406522 Query: 396 aaggcaagagctacgctttgctt 418 || ||||||||||| |||||||| Sbjct: 28406523 aatgcaagagctacactttgctt 28406545 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 223 ttaggctatggacgagttgtcggatgtcatctgcccaagaccatgtcggagggttgagag 282 ||||||||| | |||||| || || |||||| ||||||||||||||||| |||||| | Sbjct: 28405598 ttaggctattaatgagttgccgaatatcatctacccaagaccatgtcggactgttgagtg 28405657 Query: 283 ctcgtattgagttcaagcaaacgagaagggtccctcc 319 |||||||||||||||||||||||||||| || ||||| Sbjct: 28405658 ctcgtattgagttcaagcaaacgagaagagttcctcc 28405694
>dbj|AP003935.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0661G04 Length = 157292 Score = 220 bits (111), Expect = 4e-54 Identities = 167/183 (91%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 420 accaatgaagttgtttggcgagctttagcgatacaaaatggcaccacacataaattatcc 479 ||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 119219 accaaagaagttgtttgacgagctttagctatacaaaatggcaccccacatatattatcc 119278 Query: 480 tgcaacaacagaacatccgcaacagctacccgctgttgcactgggcgcgttgtgctagaa 539 |||||||| |||||||| |||||||| ||| ||||||||||||| | || || ||||||| Sbjct: 119279 tgcaacaaaagaacatctgcaacagccacc-gctgttgcactgg-cacgctgggctagaa 119336 Query: 540 caataccaactgttgcagctgcaagagctggtgcatcatttataccatcaccaaccatta 599 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 119337 ctataccaaccgttgcagctgcaagagctggtgcatcatttatgccatcaccaaccatta 119396 Query: 600 tta 602 ||| Sbjct: 119397 tta 119399 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 336 gtcaaccaaagaggaagaaatcctaagacagaaggaagtgcagcaaaaacaatacaggtt 395 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 119041 gtcaaccaaagaggaagaaatcccaaaacagaaggaagtgccgcaaaaacaatacaagac 119100 Query: 396 aaggcaagagctacgctttgctt 418 || ||||||||||| |||||||| Sbjct: 119101 aatgcaagagctacactttgctt 119123 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 223 ttaggctatggacgagttgtcggatgtcatctgcccaagaccatgtcggagggttgagag 282 ||||||||| | |||||| || || |||||| ||||||||||||||||| |||||| | Sbjct: 118176 ttaggctattaatgagttgccgaatatcatctacccaagaccatgtcggactgttgagtg 118235 Query: 283 ctcgtattgagttcaagcaaacgagaagggtccctcc 319 |||||||||||||||||||||||||||| || ||||| Sbjct: 118236 ctcgtattgagttcaagcaaacgagaagagttcctcc 118272
>dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0532H03 Length = 166128 Score = 220 bits (111), Expect = 4e-54 Identities = 167/183 (91%), Gaps = 2/183 (1%) Strand = Plus / Plus Query: 420 accaatgaagttgtttggcgagctttagcgatacaaaatggcaccacacataaattatcc 479 ||||| ||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||| Sbjct: 13674 accaaagaagttgtttgacgagctttagctatacaaaatggcaccccacatatattatcc 13733 Query: 480 tgcaacaacagaacatccgcaacagctacccgctgttgcactgggcgcgttgtgctagaa 539 |||||||| |||||||| |||||||| ||| ||||||||||||| | || || ||||||| Sbjct: 13734 tgcaacaaaagaacatctgcaacagccacc-gctgttgcactgg-cacgctgggctagaa 13791 Query: 540 caataccaactgttgcagctgcaagagctggtgcatcatttataccatcaccaaccatta 599 | |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13792 ctataccaaccgttgcagctgcaagagctggtgcatcatttatgccatcaccaaccatta 13851 Query: 600 tta 602 ||| Sbjct: 13852 tta 13854 Score = 101 bits (51), Expect = 3e-18 Identities = 75/83 (90%) Strand = Plus / Plus Query: 336 gtcaaccaaagaggaagaaatcctaagacagaaggaagtgcagcaaaaacaatacaggtt 395 ||||||||||||||||||||||| || |||||||||||||| |||||||||||||| | Sbjct: 13496 gtcaaccaaagaggaagaaatcccaaaacagaaggaagtgccgcaaaaacaatacaagac 13555 Query: 396 aaggcaagagctacgctttgctt 418 || ||||||||||| |||||||| Sbjct: 13556 aatgcaagagctacactttgctt 13578 Score = 97.6 bits (49), Expect = 4e-17 Identities = 85/97 (87%) Strand = Plus / Plus Query: 223 ttaggctatggacgagttgtcggatgtcatctgcccaagaccatgtcggagggttgagag 282 ||||||||| | |||||| || || |||||| ||||||||||||||||| |||||| | Sbjct: 12631 ttaggctattaatgagttgccgaatatcatctacccaagaccatgtcggactgttgagtg 12690 Query: 283 ctcgtattgagttcaagcaaacgagaagggtccctcc 319 |||||||||||||||||||||||||||| || ||||| Sbjct: 12691 ctcgtattgagttcaagcaaacgagaagagttcctcc 12727
>emb|AM180252.1| Lawsonia intracellularis PHE/MN1-00 Length = 1457619 Score = 69.9 bits (35), Expect = 9e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||||||||||||||||| |||||||||||||||||| Sbjct: 1383247 gcaagagctggtgcatcattaataccatcaccaaccatt 1383285
>ref|NM_119890.2| Arabidopsis thaliana HMA1; copper-exporting ATPase AT4G37270 (HMA1) mRNA, complete cds Length = 4089 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 2237 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 2178 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 2177 tctcctaccataattaaacc 2158 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 2369 gttaatgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 2312
>gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence Length = 34078 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaaccat 597 |||| |||||||||||| |||||||| ||||||||||||||||| Sbjct: 30423 gcagttgcaagagctggagcatcattgataccatcaccaaccat 30466
>emb|Z99707.1|ATAP21 Arabidopsis thaliana DNA chromosome 4, ESSA I AP2 contig fragment No. 1 Length = 206420 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 25171 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 25112 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 25111 tctcctaccataattaaacc 25092
>emb|AL161591.2|ATCHRIV87 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 87 Length = 196339 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 36283 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 36342 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 36343 tctcctaccataattaaacc 36362
>gb|AY065018.1| Arabidopsis thaliana AT4g37270/C7A10_90 mRNA sequence Length = 2751 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 2236 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 2177 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 2176 tctcctaccataattaaacc 2157 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 2368 gttaatgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 2311
>gb|AY907350.1| Arabidopsis thaliana chloroplast heavy metal P-type ATPase precursor (HMA1) mRNA, complete cds; nuclear gene for chloroplast product Length = 2460 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 2105 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 2046 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 2045 tctcctaccataattaaacc 2026 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 2237 gttaatgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 2180
>emb|AJ400906.1|ATH400906 Arabidopsis thaliana mRNA for putative metal ATPase (hma1 gene) Length = 2460 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 2105 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 2046 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 2045 tctcctaccataattaaacc 2026 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 2237 gttaatgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 2180
>emb|AJ872069.1| Arabidopsis thaliana mRNA for putative metal-transporting ATPase (hma1 gene) Length = 2488 Score = 63.9 bits (32), Expect = 6e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| || |||||||||||||| |||||||| |||||||| || || Sbjct: 2131 cgttgagcaagaacaatccccactgttgcagctgctagagctggagcatcattaatccct 2072 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 2071 tctcctaccataattaaacc 2052 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 2263 gttaatgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 2206
>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome Length = 3544776 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 544 accaactgttgcagctgcaagagctggtgcatcatttataccatcaccaaccat 597 |||||| |||| ||||||||||||||||||||| || | |||||| |||||||| Sbjct: 611332 accaacggttgaagctgcaagagctggtgcatcgttcacaccatctccaaccat 611279 Score = 60.0 bits (30), Expect = 9e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 544 accaactgttgcagctgcaagagctggtgcatcatttataccatcaccaaccat 597 |||||| |||| ||||||||||||||||||||| || | |||||| |||||||| Sbjct: 391930 accaacggttgaagctgcaagagctggtgcatcgttcacaccatctccaaccat 391877
>emb|AJ580403.1|AHA580403 Arabidopsis halleri subsp. halleri partial mRNA for putative P1B-type metal ATPase (hma1 gene) Length = 577 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/58 (87%) Strand = Plus / Minus Query: 393 gttaaggcaagagctacgctttgcttcaccaatgaagttgtttggcgagctttagcga 450 ||||| |||||||||||| ||||||| |||||||| ||||| ||||| | |||||||| Sbjct: 319 gttaacgcaagagctacgttttgcttgaccaatgatgttgtctggcgggatttagcga 262 Score = 56.0 bits (28), Expect = 1e-04 Identities = 67/80 (83%) Strand = Plus / Minus Query: 527 cgttgtgctagaacaataccaactgttgcagctgcaagagctggtgcatcatttatacca 586 ||||| || |||||||| |||| |||||||||||| || ||||| |||||||| || || Sbjct: 187 cgttgagcaagaacaatcccaattgttgcagctgctagtgctggagcatcattaatccct 128 Query: 587 tcaccaaccattattaaacc 606 || || ||||| |||||||| Sbjct: 127 tctcctaccataattaaacc 108
>ref|XM_453246.1| Kluyveromyces lactis NRRL Y-1140, KLLA0D04092g predicted mRNA Length = 3459 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaaccat 597 ||||| || |||||||||||||| ||||||||||||||||| Sbjct: 3050 gctgctagggctggtgcatcattgataccatcaccaaccat 3010
>emb|CR382124.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-1140 of Kluyveromyces lactis Length = 1715506 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaaccat 597 ||||| || |||||||||||||| ||||||||||||||||| Sbjct: 345075 gctgctagggctggtgcatcattgataccatcaccaaccat 345115
>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence Length = 2906179 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccatta 599 |||||||||||||| |||||||||||||||| Sbjct: 1459538 ggtgcatcatttattccatcaccaaccatta 1459508 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 565 agctggtgcatcatttataccatcaccaaccat 597 ||||||||||||||| ||||||||||| ||||| Sbjct: 1703844 agctggtgcatcattaataccatcacctaccat 1703876
>gb|CP000024.1| Streptococcus thermophilus CNRZ1066, complete genome Length = 1796226 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccat 597 ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1410151 gcaagggctggggcatcattgataccatcaccaaccat 1410188 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaa 593 |||| |||||| ||||| |||||||| | ||||||||||| Sbjct: 779150 gcagttgcaagggctggggcatcattgacaccatcaccaa 779189
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 565 agctggtgcatcatttataccatcaccaaccatt 598 ||||||||||||||| || ||||||||||||||| Sbjct: 5314808 agctggtgcatcattaatcccatcaccaaccatt 5314775
>emb|CR628336.1| Legionella pneumophila str. Paris complete genome Length = 3503610 Score = 52.0 bits (26), Expect = 0.002 Identities = 41/46 (89%) Strand = Plus / Plus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaaccattatta 602 ||||| || |||||||||||||||| |||||||||||||| |||| Sbjct: 2715959 gctgcgagtgctggtgcatcatttactccatcaccaaccatcatta 2716004
>emb|AL591981.1| Listeria monocytogenes strain EGD, complete genome, segment 9/12 Length = 347050 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaac 594 ||||||||||| || |||||||| |||||||||||||| Sbjct: 176093 gctgcaagagccggagcatcattaataccatcaccaac 176130
>emb|AL596170.1| Listeria innocua Clip11262 complete genome, segment 8/12 Length = 313450 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaac 594 |||||||||||||| |||||||| |||||||| ||||| Sbjct: 193490 gctgcaagagctggagcatcattaataccatcgccaac 193527
>gb|CP000023.1| Streptococcus thermophilus LMG 18311, complete genome Length = 1796846 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccat 597 ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 1402506 gcaagggctggggcatcattgataccatcaccaaccat 1402543 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaa 593 |||| |||||| ||||| |||||||| | ||||||||||| Sbjct: 772727 gcagttgcaagggctggggcatcattgacaccatcaccaa 772766
>ref|XM_470523.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2733 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||||| | || ||||||||||||||| ||||| ||||||||| Sbjct: 2390 gcagctgctaaagatggtgcatcatttattccatccccaaccatt 2346
>gb|AY458645.1| Uncultured bacterium 577 clone EBAC080-L12H07 genomic sequence Length = 35996 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Plus Query: 553 tgcagctgcaagagctggtgcatcatttataccatcaccaaccat 597 ||||||||| || ||||| ||||||||||| |||||||| ||||| Sbjct: 8817 tgcagctgctagcgctggagcatcatttatcccatcacctaccat 8861
>dbj|AP003602.1| Nostoc sp. PCC 7120 plasmid pCC7120beta DNA, complete sequence Length = 186614 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaaccatt 598 |||||||||||||| |||||||| ||||||||| Sbjct: 135894 gctggtgcatcattgataccatctccaaccatt 135862
>emb|AM233362.1| Francisella tularensis subsp. holarctica strain LVS complete genome Length = 1895994 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcacca 592 ||||||||||| ||||||||| ||||||||||| Sbjct: 1813905 gcaagagctggagcatcatttgtaccatcacca 1813937 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcaccaaccatt 598 ||||| |||||||| |||||||||||||||||| Sbjct: 340141 gctggagcatcattaataccatcaccaaccatt 340173
>emb|AJ749949.1| Francisella tularensis subsp. tularensis SCHU S4 complete genome Length = 1892819 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcaccaaccatt 598 ||||| |||||||| |||||||||||||||||| Sbjct: 876280 gctggagcatcattaataccatcaccaaccatt 876312 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcacca 592 ||||||||||| ||||| ||| ||||||||||| Sbjct: 1827865 gcaagagctggagcatcgtttgtaccatcacca 1827897
>ref|XM_457803.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C03223g) partial mRNA Length = 3759 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 559 tgcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||| ||||| | |||||||||||||||||||| |||| Sbjct: 3357 tgcaagtgctggagaatcatttataccatcaccaatcatt 3318
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces hansenii Length = 1592360 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 559 tgcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||| ||||| | |||||||||||||||||||| |||| Sbjct: 259201 tgcaagtgctggagaatcatttataccatcaccaatcatt 259240
>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome Length = 6413771 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaaccat 597 |||||||||||||| || |||||||||||||| Sbjct: 1924079 gctggtgcatcattaatcccatcaccaaccat 1924048
>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome Length = 1767403 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 559 tgcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||| ||||||||||||||||| ||||| || |||||| Sbjct: 137200 tgcaagtgctggtgcatcatttattccatctcccaccatt 137161 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcacca 592 ||||||||||||| |||||||||| Sbjct: 1374783 ggtgcatcatttacaccatcacca 1374760 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaaccat 597 ||||| |||||||| || |||||||||||||| Sbjct: 792069 gctggagcatcattaattccatcaccaaccat 792038
>gb|AE017194.1| Bacillus cereus ATCC 10987, complete genome Length = 5224283 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Plus Query: 559 tgcaagagctggtgcatcatttataccatcaccaaccatt 598 |||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3506693 tgcaagtgctggagcatcatttattccatctccaaccatt 3506732
>gb|AF019115.1|AF019115 Glycine max putative cadmium-transporting ATPase (SOYCTA) mRNA, complete cds Length = 1489 Score = 48.1 bits (24), Expect = 0.034 Identities = 57/68 (83%) Strand = Plus / Minus Query: 536 agaacaataccaactgttgcagctgcaagagctggtgcatcatttataccatcaccaacc 595 ||||| || ||||| |||||||| || || ||||| |||||||| || || ||||||||| Sbjct: 842 agaactatcccaacagttgcagcagctagtgctggggcatcattgatgccttcaccaacc 783 Query: 596 attattaa 603 || ||||| Sbjct: 782 ataattaa 775
>gb|AE017262.2| Listeria monocytogenes str. 4b F2365, complete genome Length = 2905187 Score = 48.1 bits (24), Expect = 0.034 Identities = 36/40 (90%) Strand = Plus / Minus Query: 559 tgcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||||||| || |||||||| || ||||||||||||||| Sbjct: 689474 tgcaagagccggagcatcattaattccatcaccaaccatt 689435 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaac 594 ||||||||||| |||||||| || ||||||||||| Sbjct: 1908471 gcaagagctggagcatcattaatgccatcaccaac 1908505 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 agagctggtgcatcatttataccatcacc 591 ||||| ||||||||||||| ||||||||| Sbjct: 847112 agagccggtgcatcatttacaccatcacc 847084
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3559328 gcaagtgctggagcatcatttattccatctccaaccatt 3559366
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3531289 gcaagtgctggagcatcatttattccatctccaaccatt 3531327
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3531863 gcaagtgctggagcatcatttattccatctccaaccatt 3531901
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3612688 gcaagtgctggagcatcatttattccatctccaaccatt 3612726
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 46.1 bits (23), Expect = 0.13 Identities = 29/31 (93%) Strand = Plus / Plus Query: 567 ctggtgcatcatttataccatcaccaaccat 597 |||| |||||||| ||||||||||||||||| Sbjct: 2024227 ctggcgcatcattaataccatcaccaaccat 2024257
>emb|CR378672.1| Photobacterium profundum SS9; segment 10/12 Length = 348526 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 563 agagctggtgcatcatttataccatcaccaaccat 597 |||||||| ||||| || ||||||||||||||||| Sbjct: 138854 agagctggggcatcgttaataccatcaccaaccat 138820
>gb|AF074400.1|AF074400 Schistosoma mansoni calcium ATPase 2 (SMA2) mRNA, complete cds Length = 4148 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacca 592 |||||||||||||||| |||||||||| Sbjct: 2282 gctggtgcatcatttacaccatcacca 2256
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 46.1 bits (23), Expect = 0.13 Identities = 35/39 (89%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatttataccatcaccaaccatt 598 ||||| ||||| ||||||||||| ||||| ||||||||| Sbjct: 3531162 gcaagtgctggagcatcatttattccatctccaaccatt 3531200
>ref|XM_641004.1| Dictyostelium discoideum hypothetical protein (DDB0190385), partial mRNA Length = 4161 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 574 atcatttataccatcaccaaccatta 599 |||||||| ||||||||||||||||| Sbjct: 3828 atcatttacaccatcaccaaccatta 3803
>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete genome Length = 3397754 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Minus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaaccattatta 602 ||||| || ||||| |||||||||| |||||||||||||| |||| Sbjct: 1105278 gctgcgagtgctggagcatcatttactccatcaccaaccatcatta 1105233
>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome Length = 2650701 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 572 gcatcatttataccatcaccaaccat 597 |||||||| ||||||||||||||||| Sbjct: 1780503 gcatcattgataccatcaccaaccat 1780528
>gb|AY259130.1| Staphylococcus aureus ATPase copper transport and putative copper oxidase genes, complete cds Length = 3852 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 572 gcatcatttataccatcaccaaccat 597 |||||||| ||||||||||||||||| Sbjct: 1863 gcatcattgataccatcaccaaccat 1838
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaacc 595 |||||||| | || ||||||||||||||| ||||| |||||| Sbjct: 4102611 gcagctgctaaagatggtgcatcatttattccatccccaacc 4102652
>ref|XM_736431.1| Plasmodium chabaudi chabaudi calcium-transporting ATPase, (PC301192.00.0) partial mRNA Length = 2202 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 562 aagagctggtgcatcatttataccatcacc 591 |||||| ||||||||||||| ||||||||| Sbjct: 2013 aagagcaggtgcatcatttacaccatcacc 1984
>emb|X71765.1|PFCAATPAS P. falciparum gene for Ca2+ - ATPase Length = 5477 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2908 gctggtgcatcatttacaccatcacc 2883
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 200209 gctggtgcatcatttacaccatcacc 200234
>gb|AF480912.1| Legionella pneumophila clone pA37F putative lipoprotein (plpA), putative copper efflux ATPase (copA2), chemiosmotic efflux system C protein A (cecA), chemiosmotic efflux system C protein B (cecB), chemiosmotic efflux system C protein C (cecC), putative copper efflux ATPase (copA1), chemiosmotic efflux system B protein A (cebA), chemiosmotic efflux system B protein B (cebB), chemiosmotic efflux system B protein C (cebC), putative cation efflux transporter (ctpA), putative cadmium efflux ATPase (cadA1), and cadA2 genes, complete cds; and unknown genes Length = 38800 Score = 44.1 bits (22), Expect = 0.53 Identities = 40/46 (86%) Strand = Plus / Plus Query: 557 gctgcaagagctggtgcatcatttataccatcaccaaccattatta 602 ||||| || ||||| |||||||||| |||||||||||||| |||| Sbjct: 33976 gctgcgagtgctggagcatcatttactccatcaccaaccatcatta 34021
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaacc 595 |||||||| | || ||||||||||||||| ||||| |||||| Sbjct: 4102720 gcagctgctaaagatggtgcatcatttattccatccccaacc 4102761
>gb|AC125472.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0050H14, complete sequence Length = 142245 Score = 44.1 bits (22), Expect = 0.53 Identities = 37/42 (88%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaacc 595 |||||||| | || ||||||||||||||| ||||| |||||| Sbjct: 3248 gcagctgctaaagatggtgcatcatttattccatccccaacc 3289
>gb|DQ171938.1| Plasmodium chabaudi chabaudi calcium-dependent ATPase (atp6) gene, complete cds Length = 8714 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 562 aagagctggtgcatcatttataccatcacc 591 |||||| ||||||||||||| ||||||||| Sbjct: 6494 aagagcaggtgcatcatttacaccatcacc 6465
>dbj|AB122148.1| Plasmodium reichenowi serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds Length = 4063 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2869 gctggtgcatcatttacaccatcacc 2844
>dbj|AB121060.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:Thai 838 Length = 4049 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121059.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:7G8 Length = 4036 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121058.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:RO33 Length = 4045 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121057.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:MAD20 Length = 4060 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121056.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/96 Length = 4068 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121055.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/102 Length = 4049 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121054.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:T9/94 Length = 4044 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121053.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:Dd2 Length = 4057 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|AB121052.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:HB3 Length = 4037 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2833 gctggtgcatcatttacaccatcacc 2808
>dbj|AB121051.1| Plasmodium falciparum serca gene for sarcoplasmic and endoplasmic reticulum Ca-ATPase, complete cds, isolate:K1 Length = 4049 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2836 gctggtgcatcatttacaccatcacc 2811
>dbj|BA000016.3| Clostridium perfringens str. 13 DNA, complete genome Length = 3031430 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 572 gcatcatttataccatcaccaaccat 597 ||||||||||| |||||||||||||| Sbjct: 686580 gcatcatttattccatcaccaaccat 686605
>emb|AJ532679.1|PFA532679 Synthetic construct mRNA for Plasmodium falciparum calcium pump (atpase6 gene) Length = 3695 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcacc 591 |||||||||||||||| ||||||||| Sbjct: 2766 gctggtgcatcatttacaccatcacc 2741
>emb|BX571856.1| Staphylococcus aureus subsp. aureus strain MRSA252, complete genome Length = 2902619 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 572 gcatcatttataccatcaccaaccat 597 |||||||| ||||||||||||||||| Sbjct: 756612 gcatcattgataccatcaccaaccat 756587 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2726310 ggtgcatcatttacaccgtcaccaaccat 2726282
>gb|AE016830.1| Enterococcus faecalis V583, complete genome Length = 3218031 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaac 594 ||||||||||| |||||||||||||| Sbjct: 1379836 ggtgcatcattcataccatcaccaac 1379811 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||| || |||||||||||||| Sbjct: 715198 ggtgcatcattaatgccatcaccaaccat 715170
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 569 ggtgcatcatttataccatcaccaaccatt 598 ||||||||||||||||| || ||||||||| Sbjct: 442182 ggtgcatcatttataccgtctccaaccatt 442211
>gb|U42410.1|PMU42410 Proteus mirabilis heavy-metal transporting P-type ATPase gene, partial cds Length = 2487 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 559 tgcaagagctggtgcatcatttataccatc 588 |||||||||||| |||||||| |||||||| Sbjct: 2163 tgcaagagctggggcatcattgataccatc 2134
>gb|AC166822.3| Mus musculus BAC clone RP24-117F20 from chromosome 14, complete sequence Length = 186860 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 349 gaagaaatcctaagacagaaggaag 373 ||||||||||||| ||||||||||| Sbjct: 89010 gaagaaatcctaacacagaaggaag 88986
>emb|CR855371.13| Chicken DNA sequence from clone WAG-45A21, complete sequence Length = 104062 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 555 cagctgcaagagctggtgcat 575 ||||||||||||||||||||| Sbjct: 101589 cagctgcaagagctggtgcat 101609
>ref|XM_672242.1| Plasmodium berghei strain ANKA calcium-transporting ATPase, (PB000675.00.0) partial mRNA Length = 3360 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 563 agagctggtgcatcatttataccatcacc 591 ||||| ||||||||||||| ||||||||| Sbjct: 2435 agagcaggtgcatcatttacaccatcacc 2407
>gb|AC135229.31| Medicago truncatula clone mth2-7m14, complete sequence Length = 111679 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcaccaaccatt 598 ||||||| ||||||||||||||| || |||||| Sbjct: 82778 gctggtgaatcatttataccatctcctaccatt 82810
>emb|AL691449.21| Human DNA sequence from clone RP11-558F24 on chromosome 1 Contains two novel genes, a ribosomal protein L26-like 1 pseudogene (RPL26L1), the PIK3CD gene for phosphoinositide-3-kinase, catalytic, delta polypeptide, the 3' end of the CLSTN1 gene for calsyntenin 1 and a CpG island, complete sequence Length = 163934 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 339 aaccaaagaggaagaaatcct 359 ||||||||||||||||||||| Sbjct: 43852 aaccaaagaggaagaaatcct 43832
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaaccatt 598 |||||||||||||| || |||||||| |||||| Sbjct: 2357813 gctggtgcatcattgatgccatcacccaccatt 2357781
>emb|BX571857.1| Staphylococcus aureus strain MSSA476, complete genome Length = 2799802 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2623348 ggtgcatcatttacaccgtcaccaaccat 2623320
>emb|AJ001437.1|PMPPAA Proteus mirabilis ppaA gene and orf1 Length = 2888 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||| ||||||||||| ||||| Sbjct: 2317 ggtgcatcattaataccatcacccaccat 2289
>emb|AL928605.22| Mouse DNA sequence from clone RP23-139P14 on chromosome 4, complete sequence Length = 209024 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 456 aatggcaccacacataaatta 476 ||||||||||||||||||||| Sbjct: 175591 aatggcaccacacataaatta 175611
>dbj|BA000017.4| Staphylococcus aureus subsp. aureus Mu50 DNA, complete genome Length = 2878529 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2704874 ggtgcatcatttacaccgtcaccaaccat 2704846
>gb|AC074026.14| Staphylococcus aureus clone sabac-16, complete sequence Length = 52695 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 15921 ggtgcatcatttacaccgtcaccaaccat 15893
>gb|CP000046.1| Staphylococcus aureus subsp. aureus COL, complete genome Length = 2809422 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2635323 ggtgcatcatttacaccgtcaccaaccat 2635295
>gb|CP000253.1| Staphylococcus aureus subsp. aureus NCTC 8325, complete genome Length = 2821361 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2647267 ggtgcatcatttacaccgtcaccaaccat 2647239
>gb|CP000255.1| Staphylococcus aureus subsp. aureus USA300, complete genome Length = 2872769 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2698628 ggtgcatcatttacaccgtcaccaaccat 2698600
>dbj|BA000033.2| Staphylococcus aureus subsp. aureus MW2 DNA, complete genome, strain:MW2 Length = 2820462 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2643990 ggtgcatcatttacaccgtcaccaaccat 2643962
>dbj|BA000018.3| Staphylococcus aureus subsp. aureus N315 genomic DNA, complete genome Length = 2814816 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2634448 ggtgcatcatttacaccgtcaccaaccat 2634420
>emb|BX001003.6| Zebrafish DNA sequence from clone CH211-215E7, complete sequence Length = 212403 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 gctcatgcaatgaaaattaca 131 ||||||||||||||||||||| Sbjct: 126247 gctcatgcaatgaaaattaca 126267
>emb|AL929141.7| Zebrafish DNA sequence from clone CH211-149P5 in linkage group 18, complete sequence Length = 182116 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 111 gctcatgcaatgaaaattaca 131 ||||||||||||||||||||| Sbjct: 149863 gctcatgcaatgaaaattaca 149843
>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome Length = 2742531 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcaccaaccat 597 ||||||||||||| ||| ||||||||||| Sbjct: 2572074 ggtgcatcatttacaccgtcaccaaccat 2572046
>gb|AC185987.2| Pan troglodytes BAC clone CH251-400P17 from chromosome 9, complete sequence Length = 161307 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 134050 agacatagttctttaggcta 134069
>gb|AE006319.1| Lactococcus lactis subsp. lactis IL1403 section 81 of 218 of the complete genome Length = 10302 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaa 593 |||| |||||||||||| | |||||| | ||||||||||| Sbjct: 4003 gcagttgcaagagctggggaatcattgacaccatcaccaa 4042
>ref|XM_715668.1| Candida albicans SC5314 copper-transporting ATPase (CaO19_11803), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaa 593 ||||| |||||||||||||| ||||||| Sbjct: 3020 gctggggcatcatttataccgtcaccaa 2993
>ref|XM_715541.1| Candida albicans SC5314 copper-transporting ATPase (CaO19_4328), mRNA Length = 3615 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaa 593 ||||| |||||||||||||| ||||||| Sbjct: 3020 gctggggcatcatttataccgtcaccaa 2993
>gb|AC183602.2| Pan troglodytes BAC clone CH251-350L8 from chromosome 9, complete sequence Length = 165959 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 145798 agacatagttctttaggcta 145817
>emb|CR954246.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome I, complete sequence Length = 3214944 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 371 aagtgcagcaaaaacaatac 390 |||||||||||||||||||| Sbjct: 1273907 aagtgcagcaaaaacaatac 1273926
>gb|AY033085.1| Candida albicans copper-transporting P-type ATPase (CCC2) gene, CCC2-b allele, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaa 593 ||||| |||||||||||||| ||||||| Sbjct: 3271 gctggggcatcatttataccgtcaccaa 3244
>gb|AY033084.1| Candida albicans copper-transporting P-type ATPase (CCC2) gene, CCC2-a allele, complete cds Length = 4000 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaa 593 ||||| |||||||||||||| ||||||| Sbjct: 3271 gctggggcatcatttataccgtcaccaa 3244
>gb|AC107368.11| Mus musculus chromosome 3, clone RP23-243N8, complete sequence Length = 253744 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 338 caaccaaagaggaagaaatcctaa 361 |||||||||||| ||||||||||| Sbjct: 55279 caaccaaagaggtagaaatcctaa 55256
>gb|AC122280.4| Mus musculus BAC clone RP23-239I12 from 17, complete sequence Length = 238767 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 353 aaatcctaagacagaaggaa 372 |||||||||||||||||||| Sbjct: 86729 aaatcctaagacagaaggaa 86710
>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three novel pseudogenes, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), the gene for a novel protein similar to Ankyrin repeat domain protein 18A (LOC441424), a pseudogene similar to part of cytochrome P450 family protein, a novel zinc finger pseudogene and a CpG island, complete sequence Length = 161157 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 140481 agacatagttctttaggcta 140500
>emb|CR769767.5| Human DNA sequence from clone RP11-204M4 on chromosome 9 Contains the 5' end of a novel gene, a novel pseudogene and a pseudogene similar to part of ribosomal protein L10 (RPL10), complete sequence Length = 153630 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 107860 agacatagttctttaggcta 107841
>emb|CR788264.3| Human DNA sequence from clone RP11-436G20 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), complete sequence Length = 171101 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 145618 agacatagttctttaggcta 145637
>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a novel pseudogene, the gene for a novel protein similar to ankyrin repeat domain 20A (ANKRD20A), a novel gene and a CpG island, complete sequence Length = 99502 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 5306 agacatagttctttaggcta 5287
>emb|AL929000.6| Human DNA sequence from clone RP11-451N24 on chromosome 9, complete sequence Length = 64208 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 3304 agacatagttctttaggcta 3285
>emb|AL590399.4| Human DNA sequence from clone RP11-111F5 on chromosome 9 Contains a pseudogene similar to part of ribosomal protein L7a (RPL7A), four novel genes, a pseudogene similar to part of ribosomal protein L10 (RPL10), a novel pseudogene and a pseudogene similar to part of fibroblast growth factor 7 (keratinocyte growth factor) (FGF7), complete sequence Length = 187505 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 79287 agacatagttctttaggcta 79306
>gb|AC183767.2| Pan troglodytes BAC clone CH251-373L9 from chromosome 9, complete sequence Length = 162355 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 78246 agacatagttctttaggcta 78265
>gb|AC087262.2| Rattus norvegicus strain Brown Norway clone RP31-151E23, complete sequence Length = 132809 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 gaaatcctaagacagaagga 371 |||||||||||||||||||| Sbjct: 38073 gaaatcctaagacagaagga 38054
>gb|AC157926.4| Mus musculus chromosome 3, clone RP24-61J18, complete sequence Length = 231722 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 338 caaccaaagaggaagaaatcctaa 361 |||||||||||| ||||||||||| Sbjct: 56970 caaccaaagaggtagaaatcctaa 56993
>gb|AC183605.3| Pan troglodytes BAC clone CH251-334E18 from chromosome 4, complete sequence Length = 191017 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 53174 agacatagttctttaggcta 53155
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcaccaaccat 597 ||||| |||||||| || |||||||||||||| Sbjct: 1974106 gctggcgcatcattaatgccatcaccaaccat 1974137
>emb|CR378666.1| Photobacterium profundum SS9; segment 4/12 Length = 348313 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 566 gctggtgcatcatttataccatcaccaaccat 597 ||||| |||||||| ||||||||||| ||||| Sbjct: 331538 gctggggcatcattaataccatcaccgaccat 331507
>emb|BX957222.1| Methanococcus maripaludis S2 complete genome; segment 4/5 Length = 349607 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 562 aagagctggtgcatcatttataccatcaccaa 593 ||||||||| ||||||||||| ||||| |||| Sbjct: 106726 aagagctggggcatcatttattccatccccaa 106695
>emb|AL022299.1|SPBC29A3 S.pombe chromosome II cosmid c29A3 Length = 42770 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 atcatttataccatcaccaaccat 597 |||||||||||||||||| ||||| Sbjct: 3452 atcatttataccatcacctaccat 3429
>emb|AL773537.4| Human DNA sequence from clone RP11-268E1 on chromosome 9 Contains three novel pseudogene, a novel gene, a pseudogene similar to part ofribosomal protein L10 (QM, NOV, DXS648, DXS648E, FLJ23544) (RPL10) and a CpG island, complete sequence Length = 166231 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 108143 agacatagttctttaggcta 108124
>gb|BC098958.1| Xenopus laevis hypothetical LOC495046, mRNA (cDNA clone MGC:114626 IMAGE:4970034), complete cds Length = 5009 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcacca 592 ||||||||||||| |||||||||| Sbjct: 2578 ggtgcatcatttacaccatcacca 2555
>gb|AC098860.2| Homo sapiens BAC clone RP11-229G4 from 4, complete sequence Length = 119491 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 15157 agacatagttctttaggcta 15138
>emb|CR382285.2| Human DNA sequence from clone bP-21201H5 on chromosome 21, complete sequence Length = 178865 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 131181 agacatagttctttaggcta 131200
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 555 cagctgcaagagctggtgca 574 |||||||||||||||||||| Sbjct: 1418251 cagctgcaagagctggtgca 1418232
>ref|NM_001021733.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC29A3.01), partial mRNA Length = 2715 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 574 atcatttataccatcaccaaccat 597 |||||||||||||||||| ||||| Sbjct: 2238 atcatttataccatcacctaccat 2215
>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete sequence Length = 202286 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 catggagaagaactgtcaac 341 |||||||||||||||||||| Sbjct: 149517 catggagaagaactgtcaac 149536
>gb|AC159136.7| Mus musculus 10 BAC RP23-58L22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207997 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 aagaaatcctaagacagaag 369 |||||||||||||||||||| Sbjct: 166386 aagaaatcctaagacagaag 166367
>dbj|BA000026.2| Mycoplasma penetrans HF-2 DNA, complete genome Length = 1358633 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 569 ggtgcatcatttataccatcacca 592 ||||||||||||| |||||||||| Sbjct: 429071 ggtgcatcatttacaccatcacca 429048
>emb|X78322.1|NVB24P N.viridescens mRNA for oocyte nuclear protein Length = 2587 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 575 tcatttataccatcaccaac 594 |||||||||||||||||||| Sbjct: 2010 tcatttataccatcaccaac 1991
>ref|NM_209843.1| Eremothecium gossypii ADR395Cp (ADR395C), mRNA Length = 1443 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 555 cagctgcaagagctggtgca 574 |||||||||||||||||||| Sbjct: 205 cagctgcaagagctggtgca 224
>gb|AC153555.5| Mus musculus 10 BAC RP23-193J20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208079 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 aagaaatcctaagacagaag 369 |||||||||||||||||||| Sbjct: 38640 aagaaatcctaagacagaag 38621
>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete sequence Length = 194283 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 322 catggagaagaactgtcaac 341 |||||||||||||||||||| Sbjct: 172090 catggagaagaactgtcaac 172109
>gb|AC118731.11| Mus musculus chromosome 1, clone RP24-169M20, complete sequence Length = 160688 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 aacacagcatgaaacgaggcatgt 46 |||||||||||||| ||||||||| Sbjct: 90315 aacacagcatgaaatgaggcatgt 90338
>gb|AE017126.1| Prochlorococcus marinus subsp. marinus str. CCMP1375 complete genome Length = 1751080 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 566 gctggtgcatcatttataccatcaccaaccat 597 |||||||||||||| || ||||| |||||||| Sbjct: 153327 gctggtgcatcattaattccatctccaaccat 153358
>gb|AE017195.1| Bacillus cereus ATCC 10987 plasmid pBc10987, complete sequence Length = 208369 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 560 gcaagagctggtgcatcatt 579 |||||||||||||||||||| Sbjct: 159324 gcaagagctggtgcatcatt 159343
>gb|AC133584.12| Mus musculus chromosome 5, clone RP24-448L9, complete sequence Length = 165291 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 315 cctccttcatggagaagaac 334 |||||||||||||||||||| Sbjct: 83487 cctccttcatggagaagaac 83468
>emb|AL365201.14| Human DNA sequence from clone RP11-39C22 on chromosome 9, complete sequence Length = 114026 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 agacatagttctttaggcta 230 |||||||||||||||||||| Sbjct: 20126 agacatagttctttaggcta 20107
>dbj|AP001965.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2291N16, complete sequence Length = 89421 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 357 cctaagacagaaggaagtgcagcaaaaa 384 ||||||||| |||||| ||||||||||| Sbjct: 2647 cctaagacaaaaggaattgcagcaaaaa 2674
>dbj|AP001870.2| Homo sapiens genomic DNA, chromosome 4q22-q24, clone:2206F6, complete sequence Length = 114285 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 357 cctaagacagaaggaagtgcagcaaaaa 384 ||||||||| |||||| ||||||||||| Sbjct: 53082 cctaagacaaaaggaattgcagcaaaaa 53055
>dbj|AB016236.1| Lactococcus lactis bv. diacetylactis DNA, citrate permease gene Length = 3638 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 554 gcagctgcaagagctggtgcatcatttataccatcaccaa 593 |||| |||||||||||| | |||||| | ||||||||||| Sbjct: 2988 gcagttgcaagagctggggaatcattgacaccatcaccaa 3027 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,431,009 Number of Sequences: 3902068 Number of extensions: 5431009 Number of successful extensions: 102375 Number of sequences better than 10.0: 138 Number of HSP's better than 10.0 without gapping: 138 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101249 Number of HSP's gapped (non-prelim): 1116 length of query: 606 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 583 effective length of database: 17,143,297,704 effective search space: 9994542561432 effective search space used: 9994542561432 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
