ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22h01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ000226.1|HVJ000226 Hordeum vulgare mRNA for expressed sequence tag Length = 334 Score = 640 bits (323), Expect = e-180 Identities = 333/335 (99%), Gaps = 1/335 (0%) Strand = Plus / Minus Query: 220 ccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaacttct 279 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 334 ccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaacttct 275 Query: 280 cgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaagtcct 339 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 caacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaagtcct 215 Query: 340 tgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtggagga 399 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 214 tgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtggagga 155 Query: 400 actcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcaggagcac 459 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 154 actcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcaggagcac 95 Query: 460 caatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttgttc 519 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 94 caatgcggacaccacccggggacaatgcactgctgtcaccgaagacagca-ttcttgttc 36 Query: 520 aatgtaatgctacaaaggtcacacatcttttcgac 554 ||||||||||||||||||||||||||||||||||| Sbjct: 35 aatgtaatgctacaaaggtcacacatcttttcgac 1
>dbj|AK105983.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-G03, full insert sequence Length = 1153 Score = 480 bits (242), Expect = e-132 Identities = 345/378 (91%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 864 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 805 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 804 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 745 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 744 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 685 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 684 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 625 Query: 453 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattt 512 |||| ||||||||||||||| || || | |||||||||||||||||| ||||||||| || Sbjct: 624 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-tt 566 Query: 513 cttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcc 572 |||||| | ||||||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 565 cttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcc 506 Query: 573 aagagggcggagatccca 590 ||||||||| |||||||| Sbjct: 505 aagagggcgaagatccca 488
>dbj|AK101450.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039N02, full insert sequence Length = 1896 Score = 480 bits (242), Expect = e-132 Identities = 345/378 (91%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1499 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1440 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1439 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 1380 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1379 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1320 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1319 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1260 Query: 453 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattt 512 |||| ||||||||||||||| || || | |||||||||||||||||| ||||||||| || Sbjct: 1259 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-tt 1201 Query: 513 cttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcc 572 |||||| | ||||||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1200 cttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcc 1141 Query: 573 aagagggcggagatccca 590 ||||||||| |||||||| Sbjct: 1140 aagagggcgaagatccca 1123
>dbj|AK071541.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100I04, full insert sequence Length = 1811 Score = 480 bits (242), Expect = e-132 Identities = 345/378 (91%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1499 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1440 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 1439 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 1380 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1379 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1320 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1319 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1260 Query: 453 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattt 512 |||| ||||||||||||||| || || | |||||||||||||||||| ||||||||| || Sbjct: 1259 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-tt 1201 Query: 513 cttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcc 572 |||||| | ||||||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1200 cttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcc 1141 Query: 573 aagagggcggagatccca 590 ||||||||| |||||||| Sbjct: 1140 aagagggcgaagatccca 1123
>dbj|AK105624.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-C10, full insert sequence Length = 1811 Score = 472 bits (238), Expect = e-130 Identities = 344/378 (91%), Gaps = 1/378 (0%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 1498 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 1439 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| | |||||||||||||||||||||||||||| Sbjct: 1438 aacttctcgacctccagcttgaggttctcgacgtccttgttgttcaccaggcccttggag 1379 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 1378 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 1319 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 1318 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 1259 Query: 453 ggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcattt 512 |||| ||||||||||||||| || || | |||||||||||||||||| ||||||||| || Sbjct: 1258 ggagtaccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-tt 1200 Query: 513 cttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagcc 572 |||||| | ||||||||| ||||||||||||||||| || |||||||| ||||||||||| Sbjct: 1199 cttgttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgttgccagtcaagcc 1140 Query: 573 aagagggcggagatccca 590 ||||||||| |||||||| Sbjct: 1139 aagagggcgaagatccca 1122
>gb|AY105338.1| Zea mays PCO102700 mRNA sequence Length = 1951 Score = 444 bits (224), Expect = e-121 Identities = 339/376 (90%), Gaps = 1/376 (0%) Strand = Plus / Minus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 1624 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 1565 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 1564 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 1505 Query: 335 gtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctggtg 394 ||||||||| ||||| |||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1504 gtccttgaggagcttgccgtactccttctggatgttcaggcagatggtcactgcctggtg 1445 Query: 395 gaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagcagg 454 ||||||||| | ||||||||||| |||||||| | |||||||| |||||||| || || Sbjct: 1444 gaggaactccccaatctgctcgaaatccttctccagtagacccctcgaggtcattgctgg 1385 Query: 455 agcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttct 514 || |||||||||||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 1384 cgcgccaatgcggacaccacccggagacaatgcactgctgtcaccgaagacagca-ttct 1326 Query: 515 tgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaagccaa 574 |||||||||| ||| ||||| ||||| | ||||||||||||||||||||||||||||| Sbjct: 1325 tgttcaatgtgatgtggcaaagatcacatagcttttcgaccttgtttccagtcaagccaa 1266 Query: 575 gagggcggagatccca 590 | |||||||||||||| Sbjct: 1265 gggggcggagatccca 1250
>gb|AC137752.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0041C22, complete sequence Length = 161172 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 86750 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 86691 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 86690 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 86631 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 86630 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 86571 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 86570 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 86511 Query: 453 ggag 456 |||| Sbjct: 86510 ggag 86507 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 457 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttg 516 |||||||||||||||| || || | |||||||||||||||||| ||||||||| |||||| Sbjct: 86239 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-ttcttg 86181 Query: 517 ttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 560 || | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 86180 ttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 86137 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 86042 ccagtcaagccaagagggcgaagatccca 86014
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 14863684 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 14863625 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14863624 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 14863565 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14863564 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 14863505 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 14863504 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 14863445 Query: 453 ggag 456 |||| Sbjct: 14863444 ggag 14863441 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 457 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttg 516 |||||||||||||||| || || | |||||||||||||||||| ||||||||| |||||| Sbjct: 14863173 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-ttcttg 14863115 Query: 517 ttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 560 || | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 14863114 ttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 14863071 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 14862976 ccagtcaagccaagagggcgaagatccca 14862948
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 333 bits (168), Expect = 4e-88 Identities = 225/244 (92%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggca 272 ||||||||||||||||||||||| ||||| ||||||||||||||||| |||||| ||| Sbjct: 14943651 tcctactccttgtacttcatgctgtcgagggtgaagccgggcatgtcgaaggaggtggcg 14943592 Query: 273 aacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggag 332 |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||| Sbjct: 14943591 aacttctcgacctccagcttgaggttctcgatgtccttgttgttcaccaggcccttggag 14943532 Query: 333 aagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgcctgg 392 ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| |||||| Sbjct: 14943531 aagtccttgaggagcttgccgtgctccttctggatgttgaggcagatggtcacggcctgg 14943472 Query: 393 tggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatagca 452 |||||||||||| |||||||||| ||||||||||| || ||||||||||| ||||| ||| Sbjct: 14943471 tggaggaactcgccgatctgctcaaagtccttctcgacaagacccctggatgtcatcgca 14943412 Query: 453 ggag 456 |||| Sbjct: 14943411 ggag 14943408 Score = 111 bits (56), Expect = 3e-21 Identities = 93/104 (89%), Gaps = 1/104 (0%) Strand = Plus / Minus Query: 457 caccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttg 516 |||||||||||||||| || || | |||||||||||||||||| ||||||||| |||||| Sbjct: 14943140 caccaatgcggacaccgccaggagccaatgcactgctgtcaccaaagacagca-ttcttg 14943082 Query: 517 ttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtt 560 || | ||||||||| ||||||||||||||||| || |||||||| Sbjct: 14943081 ttaagtgtaatgctgcaaaggtcacacatcttctcaaccttgtt 14943038 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 14942943 ccagtcaagccaagagggcgaagatccca 14942915
>dbj|AK101088.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024L02, full insert sequence Length = 1944 Score = 234 bits (118), Expect = 3e-58 Identities = 272/322 (84%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 269 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 328 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 1640 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 1581 Query: 329 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 388 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 1580 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 1521 Query: 389 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 448 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 1520 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 1461 Query: 449 agcaggagcaccaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagc 508 ||||| | |||||||||||||||||| || |||| ||||||||| || || |||||||| Sbjct: 1460 ggcaggtgtaccaatgcggacaccaccaggtgacattgcactgctatccccaaagacagc 1401 Query: 509 atttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtca 568 |||| ||||||| ||||||||| || | ||||| | ||| || || ||||| ||||||| Sbjct: 1400 attt-ttgttcagtgtaatgctgcacaaatcacagaccttctcaactttgttaccagtca 1342 Query: 569 agccaagagggcggagatccca 590 ||||||||||||| |||||||| Sbjct: 1341 agccaagagggcgcagatccca 1320
>gb|AF498509.1| Zea mays cultivar DE811 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 190 bits (96), Expect = 4e-45 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcaatgtccttgttgttcaccangcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498521.1| Zea mays cultivar C_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498520.1| Zea mays cultivar F_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498519.1| Zea mays cultivar D_9 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498518.1| Zea mays cultivar D_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498517.1| Zea mays cultivar F_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498516.1| Zea mays cultivar Mo17 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498515.1| Zea mays cultivar D_7 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498514.1| Zea mays cultivar Wf9Ht hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498510.1| Zea mays cultivar H60 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498508.1| Zea mays cultivar 684 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498507.1| Zea mays cultivar D71-4HT hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 212 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 271 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 272 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 331 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 332 gtccttgaggagcttgccgtactccttctggatgt 366
>gb|AF498506.1| Zea mays cultivar H99 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 217 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 276 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 277 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 336 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 337 gtccttgaggagcttgccgtactccttctggatgt 371
>gb|AF498505.1| Zea mays cultivar CO109 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 371 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 217 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 276 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 277 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 336 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 337 gtccttgaggagcttgccgtactccttctggatgt 371
>gb|AF498504.1| Zea mays cultivar I_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498503.1| Zea mays cultivar B73 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498502.1| Zea mays cultivar F_2 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498501.1| Zea mays cultivar G_1 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 372 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 218 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 277 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 278 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 337 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 338 gtccttgaggagcttgccgtactccttctggatgt 372
>gb|AF498500.1| Zea mays cultivar B_6 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498499.1| Zea mays cultivar H_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 369 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 215 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 274 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 275 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 334 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 335 gtccttgaggagcttgccgtactccttctggatgt 369
>gb|AF498498.1| Zea mays cultivar F_4 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 375 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 221 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 280 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 281 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 340 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 341 gtccttgaggagcttgccgtactccttctggatgt 375
>gb|AF498497.1| Zea mays cultivar F_3 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AF498496.1| Zea mays cultivar F_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 373 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 219 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 278 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 279 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 338 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 339 gtccttgaggagcttgccgtactccttctggatgt 373
>gb|AF498495.1| Zea mays cultivar H_5 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 374 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 220 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 279 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 280 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 339 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 340 gtccttgaggagcttgccgtactccttctggatgt 374
>gb|AF498492.1| Zea mays cultivar 647 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 366 Score = 188 bits (95), Expect = 1e-44 Identities = 140/155 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 212 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 271 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||| Sbjct: 272 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccaggcccttgttgaa 331 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 332 gtccttgaggagcttgccgtactccttctggatgt 366
>gb|AF498511.1| Zea mays cultivar B84 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 376 Score = 182 bits (92), Expect = 9e-43 Identities = 139/155 (89%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaaggagagggcaaa 274 |||||||||||| ||||||||||| |||||||| || |||||||| |||||| |||||| Sbjct: 222 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaaggagtcggcaaa 281 Query: 275 cttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggcccttggagaa 334 |||||| |||| ||||||||||||||| ||||||||||||||||||| ||||||| ||| Sbjct: 282 cttctccacctggaccttgaggttctcgatgtccttgttgttcaccangcccttgttgaa 341 Query: 335 gtccttgagcagcttcccgtgctccttctggatgt 369 ||||||||| ||||| |||| |||||||||||||| Sbjct: 342 gtccttgaggagcttgccgtactccttctggatgt 376
>gb|AY106587.1| Zea mays PCO066539 mRNA sequence Length = 603 Score = 167 bits (84), Expect = 5e-38 Identities = 195/232 (84%) Strand = Plus / Minus Query: 244 tgaagccgggcatgtcaaaggagagggcaaacttctcgacctcgaccttgaggttctcaa 303 ||||||| ||||||||||| || ||| |||||||||||||| || | |||||||| | Sbjct: 246 tgaagccaggcatgtcaaatgaagtggcgaacttctcgacctccgccctcaggttctcta 187 Query: 304 tgtccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttct 363 |||||||||| | ||||| |||||| |||||||||||| | ||| || |||||| || Sbjct: 186 tgtccttgttttgcaccaagcccttcttgaagtccttgagaatcttgccatgctccgcct 127 Query: 364 ggatgttcaggcagatggtcactgcctggtggaggaactcggcgatctgctcgaagtcct 423 ||||| ||| |||||||||||| || |||| ||| ||||||| |||||| ||||||||| Sbjct: 126 ggatgctcaagcagatggtcacagctcggtgaaggtactcggcaatctgcacgaagtcct 67 Query: 424 tctcaaccagacccctggaggtcatagcaggagcaccaatgcggacaccacc 475 ||||||||| |||||| |||||||||||||| | ||||||||| |||||||| Sbjct: 66 tctcaaccaaaccccttgaggtcatagcaggtgtaccaatgcgcacaccacc 15
>gb|DQ175859.1| Hordeum vulgare clone DsC31 Ds insertion site flanking region genomic sequence Length = 659 Score = 165 bits (83), Expect = 2e-37 Identities = 122/135 (90%) Strand = Plus / Plus Query: 326 cttggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcac 385 |||||||||||||||||||||||| ||||||||||||||||| |||| |||||| ||||| Sbjct: 511 cttggagaagtccttgagcagcttgccgtgctccttctggattttcaagcagatcgtcac 570 Query: 386 tgcctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggt 445 |||||||||||||||||||| ||||||||||| || ||||| ||||||||||| || || Sbjct: 571 agcctggtggaggaactcggcaatctgctcgaaatctttctcgaccagaccccttgaagt 630 Query: 446 catagcaggagcacc 460 ||| || |||||||| Sbjct: 631 cattgctggagcacc 645
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 269 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 328 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 12437386 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 12437445 Query: 329 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 388 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 12437446 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 12437505 Query: 389 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 448 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 12437506 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 12437565 Query: 449 agcagg 454 ||||| Sbjct: 12437566 ggcagg 12437571 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 458 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttgt 517 |||||||||||||||||| || |||| ||||||||| || || |||||||||||| |||| Sbjct: 12438434 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcattt-ttgt 12438492 Query: 518 tcaatgtaatgct 530 ||| ||||||||| Sbjct: 12438493 tcagtgtaatgct 12438505 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 12438618 ccagtcaagccaagagggcgcagatccca 12438646
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 269 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 328 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 12391756 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 12391815 Query: 329 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 388 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 12391816 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 12391875 Query: 389 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 448 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 12391876 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 12391935 Query: 449 agcagg 454 ||||| Sbjct: 12391936 ggcagg 12391941 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 458 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttgt 517 |||||||||||||||||| || |||| ||||||||| || || |||||||||||| |||| Sbjct: 12392804 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcattt-ttgt 12392862 Query: 518 tcaatgtaatgct 530 ||| ||||||||| Sbjct: 12392863 tcagtgtaatgct 12392875 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 12392988 ccagtcaagccaagagggcgcagatccca 12393016
>emb|AL713942.4|CNS07YPB Oryza sativa chromosome 12, . BAC OSJNBa0009F05 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 163702 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 269 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 328 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 151751 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 151810 Query: 329 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 388 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 151811 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 151870 Query: 389 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 448 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 151871 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 151930 Query: 449 agcagg 454 ||||| Sbjct: 151931 ggcagg 151936 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 458 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttgt 517 |||||||||||||||||| || |||| ||||||||| || || |||||||||||| |||| Sbjct: 152799 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcattt-ttgt 152857 Query: 518 tcaatgtaatgct 530 ||| ||||||||| Sbjct: 152858 tcagtgtaatgct 152870 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 152983 ccagtcaagccaagagggcgcagatccca 153011
>emb|AL954826.3|CNS08CD2 Oryza sativa chromosome 12, . BAC OSJNBb0080P14 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132241 Score = 139 bits (70), Expect = 1e-29 Identities = 157/186 (84%) Strand = Plus / Plus Query: 269 ggcaaacttctcgacctcgaccttgaggttctcaatgtccttgttgttcaccaggccctt 328 |||||||||||| ||||| || |||||| ||||||||||||||||||| ||||||||| Sbjct: 38864 ggcaaacttctccacctccgccctgaggtcctcaatgtccttgttgttctccaggccctc 38923 Query: 329 ggagaagtccttgagcagcttcccgtgctccttctggatgttcaggcagatggtcactgc 388 | ||||| |||||| ||||| || |||||||||| | | || ||||||||||||||| Sbjct: 38924 gttgaagtacttgagaagcttgccacgctccttctgaacatccaagcagatggtcactgc 38983 Query: 389 ctggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcat 448 |||||| ||||||||||||||||| | ||||||| ||| |||| |||||| || ||||| Sbjct: 38984 ctggtgaaggaactcggcgatctgtacaaagtcctcctctaccaaaccccttgatgtcat 39043 Query: 449 agcagg 454 ||||| Sbjct: 39044 ggcagg 39049 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand = Plus / Plus Query: 458 accaatgcggacaccacccggggacaatgcactgctgtcaccgaagacagcatttcttgt 517 |||||||||||||||||| || |||| ||||||||| || || |||||||||||| |||| Sbjct: 39912 accaatgcggacaccaccaggtgacattgcactgctatccccaaagacagcattt-ttgt 39970 Query: 518 tcaatgtaatgct 530 ||| ||||||||| Sbjct: 39971 tcagtgtaatgct 39983 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||||||||||||||| |||||||| Sbjct: 40096 ccagtcaagccaagagggcgcagatccca 40124
>dbj|AB154528.1| Cucumis melo 6F11 mRNA for hypothetical protein, partial cds Length = 963 Score = 101 bits (51), Expect = 3e-18 Identities = 204/255 (80%) Strand = Plus / Minus Query: 245 gaagccgggcatgtcaaaggagagggcaaacttctcgacctcgaccttgaggttctcaat 304 |||||| |||||||| || ||| || ||| |||||||| || ||||||| | || || Sbjct: 944 gaagcctggcatgtcgaaagagccggaaaatttctcgacatcagccttgagctcttcgat 885 Query: 305 gtccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctg 364 ||||||||||| || || |||||| ||||||||| | |||||| || | |||||||| Sbjct: 884 ttccttgttgtttacaagacccttgttgaagtccttcaacagctttccatattccttctg 825 Query: 365 gatgttcaggcagatggtcactgcctggtggaggaactcggcgatctgctcgaagtcctt 424 |||||||| | |||||| || || |||| |||||||| |||||||| |||||||| || Sbjct: 824 gatgttcaaggtgatggttacagcacggtgcaggaactccgcgatctgttcgaagtcttt 765 Query: 425 ctcaaccagacccctggaggtcatagcaggagcaccaatgcggacaccacccggggacaa 484 ||| |||| ||| || || ||||| ||||| ||||| || | |||||| || || | ||| Sbjct: 764 ctctaccaaacctcttgaagtcatggcaggtgcaccgattctgacacctccgggagtcaa 705 Query: 485 tgcactgctgtcacc 499 ||||||||||||||| Sbjct: 704 tgcactgctgtcacc 690
>gb|AY224189.1| Medicago truncatula adenosylhomocysteinase (AHC2) gene, complete cds Length = 68460 Score = 83.8 bits (42), Expect = 6e-13 Identities = 63/70 (90%) Strand = Plus / Plus Query: 391 ggtggaggaactcggcgatctgctcgaagtccttctcaaccagacccctggaggtcatag 450 |||| |||||||| || ||||||||||||||||||||||||| ||||||||| ||||||| Sbjct: 20906 ggtgaaggaactctgcaatctgctcgaagtccttctcaaccaaacccctggaagtcatag 20965 Query: 451 caggagcacc 460 | || ||||| Sbjct: 20966 ctggggcacc 20975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 28/28 (100%) Strand = Plus / Plus Query: 565 gtcaagccaagagggcggagatcccata 592 |||||||||||||||||||||||||||| Sbjct: 21419 gtcaagccaagagggcggagatcccata 21446
>ref|NM_117467.2| Arabidopsis thaliana SHM4 (SERINE HYDROXYMETHYLTRANSFERASE 4); glycine hydroxymethyltransferase AT4G13930 (SHM4) mRNA, complete cds Length = 1810 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1206 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1147 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1146 ccaagagggcgaagatccca 1127
>gb|AY142551.1| Arabidopsis thaliana clone RAFL08-14-N15 (R11225) mRNA sequence Length = 3755 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1191 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1132 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1131 ccaagagggcgaagatccca 1112
>gb|AY093987.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1416 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1121 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1062 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1061 ccaagagggcgaagatccca 1042
>gb|AF361589.1| Arabidopsis thaliana AT4g13930/dl3005c mRNA, complete cds Length = 1712 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1184 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1125 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1124 ccaagagggcgaagatccca 1105
>gb|AF324991.2|AF324991 Arabidopsis thaliana AT4g13930 (AT4g13930/dl3005c) mRNA, complete cds Length = 1716 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1188 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1129 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1128 ccaagagggcgaagatccca 1109
>emb|BX827403.1|CNS0A2GP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZE10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1624 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1179 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1120 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1119 ccaagagggcgaagatccca 1100
>gb|AY086929.1| Arabidopsis thaliana clone 29662 mRNA, complete sequence Length = 1723 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttccagtcaag 570 |||||||||||||||||||| || || || || | ||| || ||||||||||| ||||| Sbjct: 1200 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttccggtcaat 1141 Query: 571 ccaagagggcggagatccca 590 ||||||||||| |||||||| Sbjct: 1140 ccaagagggcgaagatccca 1121
>gb|AF498512.1| Zea mays cultivar H98 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 259 Score = 60.0 bits (30), Expect = 9e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtcaaagg 264 |||||||||||| ||||||||||| |||||||| || |||||||| |||| Sbjct: 210 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtcgaagg 259
>gb|AF498513.1| Zea mays cultivar C123 hydroxymethyltransferase-like protein gene, 3'UTR and partial cds Length = 256 Score = 58.0 bits (29), Expect = 3e-05 Identities = 41/45 (91%) Strand = Plus / Plus Query: 215 ctactccttgtacttcatgctctcgagcgtgaagccgggcatgtc 259 |||||||||||| ||||||||||| |||||||| || |||||||| Sbjct: 210 ctactccttgtatttcatgctctcaagcgtgaacccaggcatgtc 254
>gb|BC108318.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:117397 IMAGE:6141535), complete cds Length = 3421 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 2552 aggaactcggcgatctgctcgatgtcctt 2524
>ref|XM_524321.1| PREDICTED: Pan troglodytes DNA ligase I (LOC468936), mRNA Length = 4041 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 3077 aggaactcggcgatctgctcgacgtcctt 3049
>gb|AF527418.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1) gene, complete cds Length = 56408 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 48020 aggaactcggcgatctgctcgatgtcctt 47992
>emb|CR619348.1| full-length cDNA clone CS0DJ001YC06 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1500 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 784 aggaactcggcgatctgctcgatgtcctt 756
>emb|CR599472.1| full-length cDNA clone CS0DJ009YF03 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1637 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 854 aggaactcggcgatctgctcgatgtcctt 826
>gb|AC010458.6| Homo sapiens chromosome 19 clone CTD-2265M8, complete sequence Length = 105788 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 7643 aggaactcggcgatctgctcgatgtcctt 7615
>gb|AC011466.6| Homo sapiens chromosome 19 clone CTC-453G23, complete sequence Length = 167272 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Plus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 40781 aggaactcggcgatctgctcgatgtcctt 40809
>gb|BC110622.1| Homo sapiens ligase I, DNA, ATP-dependent, mRNA (cDNA clone MGC:130025 IMAGE:40035687), complete cds Length = 3965 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 2201 aggaactcggcgatctgctcgatgtcctt 2173
>ref|NM_000234.1| Homo sapiens ligase I, DNA, ATP-dependent (LIG1), mRNA Length = 3083 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 2252 aggaactcggcgatctgctcgatgtcctt 2224
>dbj|AB208791.1| Homo sapiens mRNA for DNA ligase I variant protein Length = 4102 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 2272 aggaactcggcgatctgctcgatgtcctt 2244
>gb|M36067.1|HUMLIGAA Human DNA ligase I mRNA, complete cds Length = 3083 Score = 50.1 bits (25), Expect = 0.008 Identities = 28/29 (96%) Strand = Plus / Minus Query: 396 aggaactcggcgatctgctcgaagtcctt 424 |||||||||||||||||||||| |||||| Sbjct: 2252 aggaactcggcgatctgctcgatgtcctt 2224
>ref|XM_779683.1| PREDICTED: Strongylocentrotus purpuratus similar to serine hydroxymethyltransferase 2 (mitochondrial) (LOC579575), mRNA Length = 1847 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Minus Query: 441 gaggtcatagcaggagcaccaat 463 ||||||||||||||||||||||| Sbjct: 1335 gaggtcatagcaggagcaccaat 1313
>ref|NM_117463.2| Arabidopsis thaliana glycine hydroxymethyltransferase AT4G13890 mRNA, complete cds Length = 1592 Score = 44.1 bits (22), Expect = 0.52 Identities = 34/38 (89%) Strand = Plus / Minus Query: 553 accttgtttccagtcaagccaagagggcggagatccca 590 |||||||| || ||||| ||||||||||| |||||||| Sbjct: 1084 accttgttaccggtcaatccaagagggcgaagatccca 1047 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Minus Query: 306 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 365 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 1330 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 1271 Query: 366 atgt 369 |||| Sbjct: 1270 atgt 1267
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gaactcggcgatctgctcgaag 419 |||||||||||||||||||||| Sbjct: 3440576 gaactcggcgatctgctcgaag 3440555
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 44.1 bits (22), Expect = 0.52 Identities = 22/22 (100%) Strand = Plus / Minus Query: 398 gaactcggcgatctgctcgaag 419 |||||||||||||||||||||| Sbjct: 2659689 gaactcggcgatctgctcgaag 2659668
>emb|Z97335.2|ATFCA0 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 0 Length = 200576 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttcc 563 |||||||||||||||||||| || || || || | ||| || ||||||||||| Sbjct: 6293 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttcc 6345
>emb|AL161537.2|ATCHRIV37 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 37 Length = 199667 Score = 42.1 bits (21), Expect = 2.0 Identities = 45/53 (84%) Strand = Plus / Plus Query: 511 ttcttgttcaatgtaatgctacaaaggtcacacatcttttcgaccttgtttcc 563 |||||||||||||||||||| || || || || | ||| || ||||||||||| Sbjct: 140508 ttcttgttcaatgtaatgctgcacagatcgcagagcttctcaaccttgtttcc 140560 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 306 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 365 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 124342 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 124401 Query: 366 atgt 369 |||| Sbjct: 124402 atgt 124405
>ref|NM_137344.2| Drosophila melanogaster CG30456-RA (CG30456), mRNA Length = 2386 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggaactcggcgatctgctcga 417 ||||||||||||||||||||| Sbjct: 1061 ggaactcggcgatctgctcga 1041
>gb|AC099032.1| Drosophila melanogaster, chromosome 2R, region 53F-54A, BAC clone BACR32P08, complete sequence Length = 163072 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggaactcggcgatctgctcga 417 ||||||||||||||||||||| Sbjct: 113467 ggaactcggcgatctgctcga 113447
>gb|AY224188.1| Medicago truncatula adenosylhomocysteinase (AHC1) gene, complete cds Length = 99431 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 562 ccagtcaagccaagagggcggagatccca 590 |||||||| ||||||||||| |||||||| Sbjct: 62812 ccagtcaatccaagagggcgaagatccca 62784
>gb|AC007520.8|AC007520 Drosophila melanogaster, chromosome 2R, region 53D-54A, BAC clone BACR11M15, complete sequence Length = 170994 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggaactcggcgatctgctcga 417 ||||||||||||||||||||| Sbjct: 37634 ggaactcggcgatctgctcga 37614
>gb|AE003804.4| Drosophila melanogaster chromosome 2R, section 46 of 73 of the complete sequence Length = 260337 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 397 ggaactcggcgatctgctcga 417 ||||||||||||||||||||| Sbjct: 100759 ggaactcggcgatctgctcga 100739
>ref|XM_510545.1| PREDICTED: Pan troglodytes similar to transmembrane channel-like 3 (LOC453589), mRNA Length = 4479 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 1951 tcaggcagatggtcactgcc 1932
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ctcgacctcgaccttgaggt 297 |||||||||||||||||||| Sbjct: 43746 ctcgacctcgaccttgaggt 43727
>ref|XM_455485.1| Kluyveromyces lactis NRRL Y-1140, KLLA0F08921g predicted mRNA Length = 1410 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 444 gtcatagcaggagcaccaatgcggacaccacc 475 |||||||| |||||||| || ||||||||||| Sbjct: 1199 gtcatagctggagcaccgatacggacaccacc 1168
>gb|AY316747.1| Rhizobium sp. NGR234 megaplasmid 2 contig 1, complete sequence Length = 357655 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 295 ggttctcaatgtccttgttg 314 |||||||||||||||||||| Sbjct: 235786 ggttctcaatgtccttgttg 235805
>gb|AC132366.4| Mus musculus BAC clone RP23-461N12 from chromosome 7, complete sequence Length = 183964 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcat 232 |||||||||||||||||||| Sbjct: 29775 tcctactccttgtacttcat 29756
>ref|XM_774258.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_165_11606_4440) partial mRNA Length = 7167 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 cagcttcccgtgctccttctggat 367 |||||||||||||| ||||||||| Sbjct: 1776 cagcttcccgtgctgcttctggat 1753
>gb|DQ450540.1| Trypanosoma pestanai alpha tubulin and beta tubulin genes, partial cds Length = 1087 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 538 tcacacatcttttcgaccttgttt 561 |||| ||||||||||||||||||| Sbjct: 697 tcacgcatcttttcgaccttgttt 674
>ref|XM_545878.2| PREDICTED: Canis familiaris similar to transmembrane channel-like gene family 3 (LOC488760), mRNA Length = 3399 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 395 gaggaactcggcgatctgct 414 |||||||||||||||||||| Sbjct: 3072599 gaggaactcggcgatctgct 3072618
>gb|AY236490.1| Homo sapiens transmembrane channel-like protein 3 (TMC3) mRNA, complete cds Length = 2442 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 1033 tcaggcagatggtcactgcc 1014
>emb|AL137848.5| Human DNA sequence from clone RP11-77D6 on chromosome 9q31.1-32 Contains part of a novel gene, the OGN gene for osteoglycin (osteoinductive factor, mimecan), the OMD gene for osteomodulin, the ASPN gene for asporin (LRR class 1) and the 3' end of the ECM2 gene for extracellular matrix protein 2 (female organ and adipocyte specific), complete sequence Length = 152341 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 377 gatggtcactgcctggtggaggaa 400 |||||||||||||||| ||||||| Sbjct: 61928 gatggtcactgcctgggggaggaa 61951
>gb|AY263163.1| Homo sapiens TMC3 protein (TMC3) mRNA, complete cds Length = 4746 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 994 tcaggcagatggtcactgcc 975
>emb|CR382126.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2602197 Score = 40.1 bits (20), Expect = 8.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 444 gtcatagcaggagcaccaatgcggacaccacc 475 |||||||| |||||||| || ||||||||||| Sbjct: 829212 gtcatagctggagcaccgatacggacaccacc 829243
>emb|AL035528.2|ATF18A5 Arabidopsis thaliana DNA chromosome 4, BAC clone F18A5 (ESSA project) Length = 118718 Score = 40.1 bits (20), Expect = 8.1 Identities = 53/64 (82%) Strand = Plus / Plus Query: 306 tccttgttgttcaccaggcccttggagaagtccttgagcagcttcccgtgctccttctgg 365 |||||||||||||||| |||||| ||||||||| | || ||| |||| || || |||| Sbjct: 103250 tccttgttgttcaccaaacccttgttgaagtccttcatcaccttaccgtactgctcctgg 103309 Query: 366 atgt 369 |||| Sbjct: 103310 atgt 103313
>emb|BX640632.1|HSM806678 Homo sapiens mRNA; cDNA DKFZp686L09244 (from clone DKFZp686L09244) Length = 11482 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 1091 tcaggcagatggtcactgcc 1072
>gb|AC103794.2| Homo sapiens chromosome 11, clone CTD-3096P4, complete sequence Length = 211445 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 aagacagcatttcttgttca 520 |||||||||||||||||||| Sbjct: 30470 aagacagcatttcttgttca 30451
>gb|AC103858.2| Homo sapiens chromosome 15, clone RP11-761I4, complete sequence Length = 194996 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 167491 tcaggcagatggtcactgcc 167510
>gb|AC109809.3| Homo sapiens chromosome 15, clone CTD-2240J17, complete sequence Length = 116491 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 76587 tcaggcagatggtcactgcc 76568
>ref|XM_937643.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>ref|XM_930010.1| PREDICTED: Homo sapiens transmembrane channel-like 3 (TMC3), mRNA Length = 3303 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 370 tcaggcagatggtcactgcc 389 |||||||||||||||||||| Sbjct: 955 tcaggcagatggtcactgcc 936
>gb|DQ274179.2| Solanum tuberosum patatin-rich BAC 14K07, complete sequence Length = 154382 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 558 gtttccagtcaagccaagag 577 |||||||||||||||||||| Sbjct: 108147 gtttccagtcaagccaagag 108128
>dbj|AB009589.1| Homo sapiens gene for Osteomodulin, complete cds Length = 12414 Score = 40.1 bits (20), Expect = 8.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 377 gatggtcactgcctggtggaggaa 400 |||||||||||||||| ||||||| Sbjct: 7498 gatggtcactgcctgggggaggaa 7475
>gb|AC130532.3| Mus musculus BAC clone RP23-189G24 from 7, complete sequence Length = 207333 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 tcctactccttgtacttcat 232 |||||||||||||||||||| Sbjct: 200636 tcctactccttgtacttcat 200617
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 8.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 173 aaggcttagaagcgagacaa 192 |||||||||||||||||||| Sbjct: 236545 aaggcttagaagcgagacaa 236526 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,125,582 Number of Sequences: 3902068 Number of extensions: 5125582 Number of successful extensions: 97085 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 99 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96605 Number of HSP's gapped (non-prelim): 470 length of query: 592 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 569 effective length of database: 17,143,297,704 effective search space: 9754536393576 effective search space used: 9754536393576 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
