ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22g24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1FABH_BRAJA (Q89K89) 3-oxoacyl-[acyl-carrier-protein] synthase 3 ... 30 2.1

>FABH_BRAJA (Q89K89) 3-oxoacyl-[acyl-carrier-protein] synthase 3 (EC 2.3.1.41)|
           (3-oxoacyl-[acyl-carrier-protein] synthase III)
           (Beta-ketoacyl-ACP synthase III) (KAS III)
          Length = 326

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 112 HTSNQQKVQTSTHALHSCGQFACLMVTRHGSFSXA 216
           H +N++ +  S H LH   +   L V RHG+ S A
Sbjct: 253 HQANKRIIDASAHKLHIAPEKVVLTVDRHGNTSAA 287


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,291,481
Number of Sequences: 219361
Number of extensions: 623819
Number of successful extensions: 1454
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1453
length of database: 80,573,946
effective HSP length: 71
effective length of database: 64,999,315
effective search space used: 1559983560
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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