ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22g17 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_190270.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 906 Score = 329 bits (166), Expect = 7e-87 Identities = 402/478 (84%), Gaps = 2/478 (0%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 890 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 831 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 345 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 830 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 771 Query: 346 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 405 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 770 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 711 Query: 406 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagt 465 || | |||||||||| ||||||| ||||||||||||| ||||||||| |||||| | Sbjct: 710 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcact-gaagtgggc 652 Query: 466 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 525 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 651 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 592 Query: 526 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 585 |||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 591 gtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagc 532 Query: 586 aaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcac 645 ||| ||||||||||||| | |||||||| |||||||| |||||||||||||| || |||| Sbjct: 531 aaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcac 473 Query: 646 caaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaa 703 |||| |||||||||||||| || ||||| || || |||||||||||||| |||||||| Sbjct: 472 caaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaa 415
>dbj|AK104693.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H05, full insert sequence Length = 1219 Score = 329 bits (166), Expect = 7e-87 Identities = 402/478 (84%), Gaps = 2/478 (0%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 927 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 345 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 926 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 867 Query: 346 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 405 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 866 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 807 Query: 406 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagt 465 || | |||||||||| ||||||| ||||||||||||| ||||||||| |||||| | Sbjct: 806 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcact-gaagtgggc 748 Query: 466 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 525 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 747 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 688 Query: 526 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 585 |||||||||||||||||||| |||| ||| || |||||||||||||||||| ||||| Sbjct: 687 gtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccagc 628 Query: 586 aaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcac 645 ||| ||||||||||||| | |||||||| |||||||| |||||||||||||| || |||| Sbjct: 627 aaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcac 569 Query: 646 caaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaa 703 |||| |||||||||||||| || ||||| || || |||||||||||||| |||||||| Sbjct: 568 caaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaa 511
>emb|X64622.1|OS5SRRNMR O.sativa Rrl5 mRNA for 5S ribosomal RNA Length = 1114 Score = 315 bits (159), Expect = 1e-82 Identities = 402/479 (83%), Gaps = 3/479 (0%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 900 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 841 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 345 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 840 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 781 Query: 346 gctggcttggttgatttggccatgctagg-atcagcgcggatggcagcgtgaaccttctt 404 | ||||||||||||||||||| |||| |||||| ||||||||||| || |||||||| Sbjct: 780 tccttcttggttgatttggccatggtagggatcagcacggatggcagcatggaccttctt 721 Query: 405 gtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgag 464 ||| | |||||||||| ||||||| ||||||||||||| ||||||||| |||||| | Sbjct: 720 gtacagtgcttccatgccatcagcatcaattcccttcttgaggtactcact-gaagtggg 662 Query: 465 tttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctc 524 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| | Sbjct: 661 cttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccac 602 Query: 525 catagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccag 584 | |||||||||||||||||||| |||| ||| || |||||||||||||||||| |||| Sbjct: 601 cgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttcttgaacccag 542 Query: 585 caaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgca 644 |||| ||||||||||||| | |||||||| |||||||| |||||||||||||| || ||| Sbjct: 541 caaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggca 483 Query: 645 ccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaa 703 ||||| |||||||||||||| || ||||| || || |||||||||||||| |||||||| Sbjct: 482 ccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaa 424
>dbj|AK065268.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002K21, full insert sequence Length = 1219 Score = 313 bits (158), Expect = 4e-82 Identities = 401/478 (83%), Gaps = 3/478 (0%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 986 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgac-aga 928 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggga 345 ||||||||||||| |||||||| ||||||||| ||||||| |||||||| ||| || Sbjct: 927 ctggccttcctctgttcgtaggttagcttcttgaggttgtatctcttgtgggtcgccggt 868 Query: 346 gctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttg 405 | ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||| Sbjct: 867 tccttcttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttg 808 Query: 406 taaactgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagt 465 || | |||||||||| ||||||| ||||||||||||| |||||||| ||||||| | Sbjct: 807 tacagtgcttccatgccatcagcatcaattcccttcttgaggtactcac-tgaagtgggc 749 Query: 466 ttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaacatgccctcc 525 |||| | ||||| |||||||| || || | ||||||||||||||||| || ||||| || Sbjct: 748 ttggaatttctcaggttcctcctccgccatagacctcatgtagtcagccacgtgcccacc 689 Query: 526 atagatgtacttgcggtgaatctcagcatccagagacttctcgtccttcttgaaaccagc 585 |||||||||||||||||||| ||| ||| || |||||||||||||||||| ||||| Sbjct: 688 gtagatgtacttgcggtgaataccagaatcaagctgcttctcgtccttcttgaacccagc 629 Query: 586 aaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaagtgcac 645 ||| ||||||||||||| | |||||||| |||||||| |||||||||||||| || |||| Sbjct: 628 aaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctcccttgagggcac 570 Query: 646 caaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacggaa 703 |||| |||||||||||||| || ||||| || || |||||||||||||| |||||||| Sbjct: 569 caaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacggaa 512
>ref|NM_190269.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 915 Score = 307 bits (155), Expect = 3e-80 Identities = 361/427 (84%), Gaps = 2/427 (0%) Strand = Plus / Minus Query: 277 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgtacctcttgtga 336 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| |||||||| Sbjct: 848 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgtatctcttgtgg 789 Query: 337 gtcttgggagctggcttggttgatttggccatgctaggatcagcgcggatggcagcgtga 396 || || | |||||| |||||||||||| ||||||| |||||||||||||| || Sbjct: 788 gtagccggttccttcttggtcgatttggccatggtaggatcggcgcggatggcagcatgg 729 Query: 397 accttcttgtaaactgcttccatgtcatcagctgagattcccttcttgatgtactcactt 456 ||||||||||| | || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 728 accttcttgtacagtgattccatgccatcagcgtcaattcccttcttgaggtactcacta 669 Query: 457 gaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgtagtcagcaac 516 ||||| | |||| | ||||| |||||||| || || | ||||||||||||||||| || Sbjct: 668 -aagtgggcttggaatttctcaggttcctcctcagccatagacctcatgtagtcagccac 610 Query: 517 atgccctccatagatgtacttgcggtgaatctcagcatccagagacttctcgtccttctt 576 ||||| || |||||||||||||||||||| |||| ||| || ||||||||||||||| Sbjct: 609 gtgcccaccgtagatgtacttgcggtgaatatcagaatcaagctgcttctcgtccttctt 550 Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||| |||||||| ||||||||||||| | |||||||| |||||||| ||||||||||||| Sbjct: 549 gaacccagcaaacctcttgtcactgt-gaggaatgtcaagaccaccatccaaagctccct 491 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcg 696 | || |||||||| |||||||||||||| || ||||| || || |||||||||||||| | Sbjct: 490 tgagggcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagag 431 Query: 697 cacggaa 703 ||||||| Sbjct: 430 cacggaa 424
>gb|AY109375.1| Zea mays CL457_2 mRNA sequence Length = 1397 Score = 303 bits (153), Expect = 4e-79 Identities = 368/437 (84%), Gaps = 2/437 (0%) Strand = Plus / Minus Query: 267 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 933 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 874 Query: 327 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 386 |||||| || ||| || | |||||||||| ||| | ||| ||||||||| ||||| Sbjct: 873 cctcttatgctcctttggtggctgcttggttgacttgacaatggaaggatcagcacggat 814 Query: 387 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 446 |||||| || ||||||||||| | ||||||||||||||||| ||||||||||| || Sbjct: 813 ggcagcatggaccttcttgtacagagcttccatgtcatcagcctcaattcccttcttaat 754 Query: 447 gtactcacttgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgt 506 ||||||||| |||||||| ||||||||||| || ||||| || || || |||||||| Sbjct: 753 gtactcact-gaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgt 695 Query: 507 agtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttct 566 ||||||||||||| || ||||||||||||||||| || || ||||||||||| ||| | Sbjct: 694 agtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgt 635 Query: 567 cgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcc 626 | |||||||||||||||||||| ||||| || ||||| || ||| ||||| ||||| ||| Sbjct: 634 catccttcttgaaaccagcaaacctcttctcgctgtgagg-aatatccaggccaccatcc 576 Query: 627 aaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaaca 686 ||||||||||| || |||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 575 aaagctcccttgagggcaccaaagacacggttcccagttgtagtcctaataaggccaaca 516 Query: 687 tccaagagcgcacggaa 703 |||||||| |||||||| Sbjct: 515 tccaagagagcacggaa 499
>gb|BT016492.1| Zea mays clone Contig325 mRNA sequence Length = 1365 Score = 287 bits (145), Expect = 2e-74 Identities = 366/437 (83%), Gaps = 2/437 (0%) Strand = Plus / Minus Query: 267 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||| || | ||| ||||||||||||| |||||| || || |||||||||||||| Sbjct: 917 gttgagcctttcaatgagactggccttcctctgctcgtatgtcagtttcttggggttgta 858 Query: 327 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 386 ||||||||| ||| || | |||||||||| ||| ||| ||||||||| ||||| Sbjct: 857 cctcttgtgctcctttggtggctgcttggttgacttgaccacagaaggatcagcacggat 798 Query: 387 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 446 |||||| || ||||||||||| | ||||||||||| ||||| ||||||||||| || Sbjct: 797 ggcagcatggaccttcttgtacagagcttccatgtcgtcagcctcaattcccttcttaat 738 Query: 447 gtactcacttgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgt 506 ||||||||| |||||||| ||||||||||| || ||||| || || || |||||||| Sbjct: 737 gtactcact-gaagtgagactggtacttctctggctcctcttcagcgaggttcctcatgt 679 Query: 507 agtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttct 566 ||||||||||||| || ||||||||||||||||| || || ||||||||||| ||| | Sbjct: 678 agtcagcaacatggccaccatagatgtacttgcgatggatatcagcatccagctgcttgt 619 Query: 567 cgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcc 626 | |||||||||||||||||||| ||||| || ||||| || ||| ||||| ||||| ||| Sbjct: 618 catccttcttgaaaccagcaaacctcttctcgctgtgagg-aatatccaggccaccatcc 560 Query: 627 aaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaaca 686 ||||||||||| || |||||||| |||||||| ||||| |||||||| ||||| |||||| Sbjct: 559 aaagctcccttgagggcaccaaagacacggttcccagttgtagtcctaataaggccaaca 500 Query: 687 tccaagagcgcacggaa 703 |||||||| |||||||| Sbjct: 499 tccaagagagcacggaa 483
>gb|BT016417.1| Zea mays clone Contig250 mRNA sequence Length = 1212 Score = 200 bits (101), Expect = 4e-48 Identities = 355/437 (81%), Gaps = 2/437 (0%) Strand = Plus / Minus Query: 267 gttgagcctctcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||| || | ||||||||||||||||| ||| || || ||||||||||||||||| Sbjct: 932 gttgagcctttcaatgaggctggccttcctctgctcatatgtcagcttcttggggttgta 873 Query: 327 cctcttgtgagtcttgggagctggcttggttgatttggccatgctaggatcagcgcggat 386 |||||| || ||| || | |||||||||| || | ||| |||||| || ||||| Sbjct: 872 cctcttatgctcctttggtggctgcttggttgacttaacaatggaaggatcggcacggat 813 Query: 387 ggcagcgtgaaccttcttgtaaactgcttccatgtcatcagctgagattcccttcttgat 446 |||||| || ||||||||||| | ||||| || |||||||| | ||||||||| || Sbjct: 812 ggcagcatggaccttcttgtacagcgcttctatttcatcagcctcaactcccttcttaat 753 Query: 447 gtactcacttgaagtgagtttggtacttctcgggttcctcatctgctagcgacctcatgt 506 |||| |||| |||||| | |||||||| || || ||||| || || || | |||||| Sbjct: 752 gtacgcact-gaagtggctctggtacttttctggctcctcttcagcaaggttcttcatgt 694 Query: 507 agtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccagagacttct 566 ||||||||||||| || |||||||||||| ||||||| | |||||||||| ||| | Sbjct: 693 agtcagcaacatggccaccatagatgtacctgcggtgggtatcagcatccaactgcttgt 634 Query: 567 cgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtcc 626 ||||||||||||| |||||||| ||||| || ||||| || ||| ||||| || || ||| Sbjct: 633 cgtccttcttgaatccagcaaacctcttctcgctgtgagg-aatatccaggcctccatcc 575 Query: 627 aaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaaca 686 || |||||||| || |||||||| |||||||| || || |||||||||||||| |||||| Sbjct: 574 aatgctcccttgagggcaccaaagacacggttccctgttgtagtcctgataaggccaaca 515 Query: 687 tccaagagcgcacggaa 703 |||||||| |||||||| Sbjct: 514 tccaagagagcacggaa 498
>gb|AY106024.1| Zea mays PCO063168 mRNA sequence Length = 620 Score = 174 bits (88), Expect = 3e-40 Identities = 225/268 (83%), Gaps = 2/268 (0%) Strand = Plus / Minus Query: 436 cccttcttgatgtactcacttgaagtgagtttggtacttctcgggttcctcatctgctag 495 ||||||||||||||||| || |||||||| |||||||||||||| |||||||| || || Sbjct: 587 cccttcttgatgtactcgct-gaagtgagcctggtacttctcgggctcctcatcagccag 529 Query: 496 cgacctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatc 555 | |||| || ||||||||||| ||||||||||||||||| || || |||||||| Sbjct: 528 attcttcatatactcagcaacatggagaccatagatgtacttgcgatggatatcagcatc 469 Query: 556 cagagacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtcca 615 ||| ||| || ||||||||||| |||||||| ||||| || ||||| || ||| || | Sbjct: 468 cagctgcttatcatccttcttgaagccagcaaacctcttatcgctgtgagg-aatatcta 410 Query: 616 gaccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctga 675 ||||||| |||||||||||||| || |||||||| |||||||||||||| |||||||| | Sbjct: 409 gaccaccatccaaagctcccttgagggcaccaaagacacggtttccagtagtagtcctaa 350 Query: 676 taagaccaacatccaagagcgcacggaa 703 |||| || ||||| ||||| |||||||| Sbjct: 349 taaggccgacatctaagagggcacggaa 322
>ref|NM_123336.3| Arabidopsis thaliana 5S rRNA binding / structural constituent of ribosome AT5G39740 mRNA, complete cds Length = 1223 Score = 151 bits (76), Expect = 4e-33 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 530 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 529 tgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 478
>gb|BT008706.1| Arabidopsis thaliana At5g39740 gene, complete cds Length = 906 Score = 151 bits (76), Expect = 4e-33 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 546 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 488 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 487 tgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 436
>gb|AY093123.1| Arabidopsis thaliana ribosomal protein L5 - like (At5g39740) mRNA, complete cds Length = 1100 Score = 151 bits (76), Expect = 4e-33 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 576 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 518 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 517 tgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 466
>gb|AY079020.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1128 Score = 151 bits (76), Expect = 4e-33 Identities = 104/112 (92%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 588 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 530 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 529 tgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 478
>emb|BX831866.1|CNS09ZT2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH35ZF09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1048 Score = 143 bits (72), Expect = 9e-31 Identities = 103/112 (91%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| |||| | || ||||| |||||||||||||||| Sbjct: 565 gaaaccagcaaatctcttgtcactgtgaggga-tatcaagacctccgtccaaagctccct 507 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | ||| |||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 506 tgagttcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 455
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38968845 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38968786 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 38968785 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 38968727 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 38968726 caccatccaaagctccct 38968709 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 38963527 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 38963468 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 38963467 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 38963409 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 38963408 caccatccaaagctccct 38963391 Score = 119 bits (60), Expect = 1e-23 Identities = 118/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 38969192 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 38969133 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagtttggt 470 |||||||||| ||||||| ||||||||||||| |||||||| ||||||| | |||| Sbjct: 38969132 tgcttccatgccatcagcatcaattcccttcttgaggtactcac-tgaagtgggcttgga 38969074 Query: 471 acttctcgggttcctc 486 | ||||| |||||||| Sbjct: 38969073 atttctcaggttcctc 38969058 Score = 97.6 bits (49), Expect = 5e-17 Identities = 91/105 (86%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 38963860 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 38963801 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcact 455 || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 38963800 tgattccatgccatcagcgtcaattcccttcttgaggtactcact 38963756 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 38968537 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 38968478 Query: 702 aa 703 || Sbjct: 38968477 aa 38968476 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 277 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 38964020 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 38963971 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 38963221 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 38963162 Query: 702 aa 703 || Sbjct: 38963161 aa 38963160 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 38969401 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 38969342 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 38969341 ctggccttcctctgttcgtaggttagcttcttgaggttgta 38969301
>dbj|AP003349.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0674H09 Length = 142955 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 42478 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 42419 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 42418 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 42360 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 42359 caccatccaaagctccct 42342 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 37160 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 37101 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 37100 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 37042 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 37041 caccatccaaagctccct 37024 Score = 119 bits (60), Expect = 1e-23 Identities = 118/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 42825 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 42766 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagtttggt 470 |||||||||| ||||||| ||||||||||||| |||||||| ||||||| | |||| Sbjct: 42765 tgcttccatgccatcagcatcaattcccttcttgaggtactcac-tgaagtgggcttgga 42707 Query: 471 acttctcgggttcctc 486 | ||||| |||||||| Sbjct: 42706 atttctcaggttcctc 42691 Score = 97.6 bits (49), Expect = 5e-17 Identities = 91/105 (86%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 37493 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 37434 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcact 455 || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 37433 tgattccatgccatcagcgtcaattcccttcttgaggtactcact 37389 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 42170 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 42111 Query: 702 aa 703 || Sbjct: 42110 aa 42109 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 277 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 37653 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 37604 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 36854 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 36795 Query: 702 aa 703 || Sbjct: 36794 aa 36793 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 43034 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 42975 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 42974 ctggccttcctctgttcgtaggttagcttcttgaggttgta 42934
>dbj|AP003316.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0696G06 Length = 142571 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 133631 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 133572 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 133571 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 133513 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 133512 caccatccaaagctccct 133495 Score = 139 bits (70), Expect = 1e-29 Identities = 122/138 (88%), Gaps = 1/138 (0%) Strand = Plus / Minus Query: 499 cctcatgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatccag 558 ||||||||||||||| || ||||| || |||||||||||||||||||| |||| ||| || Sbjct: 128313 cctcatgtagtcagccacgtgcccaccgtagatgtacttgcggtgaatatcagaatcaag 128254 Query: 559 agacttctcgtccttcttgaaaccagcaaatctcttgtcactgtgggggaatgtccagac 618 |||||||||||||||||| |||||||| ||||||||||||| | |||||||| |||| Sbjct: 128253 ctgcttctcgtccttcttgaacccagcaaacctcttgtcactgt-gaggaatgtcaagac 128195 Query: 619 caccgtccaaagctccct 636 |||| ||||||||||||| Sbjct: 128194 caccatccaaagctccct 128177 Score = 119 bits (60), Expect = 1e-23 Identities = 118/136 (86%), Gaps = 1/136 (0%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 ||||||||||||||||||| |||||||||| ||||||||||| || ||||||||||| | Sbjct: 133978 cttggttgatttggccatggtaggatcagcacggatggcagcatggaccttcttgtacag 133919 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcacttgaagtgagtttggt 470 |||||||||| ||||||| ||||||||||||| |||||||| ||||||| | |||| Sbjct: 133918 tgcttccatgccatcagcatcaattcccttcttgaggtactcac-tgaagtgggcttgga 133860 Query: 471 acttctcgggttcctc 486 | ||||| |||||||| Sbjct: 133859 atttctcaggttcctc 133844 Score = 97.6 bits (49), Expect = 5e-17 Identities = 91/105 (86%) Strand = Plus / Minus Query: 351 cttggttgatttggccatgctaggatcagcgcggatggcagcgtgaaccttcttgtaaac 410 |||||| |||||||||||| ||||||| |||||||||||||| || ||||||||||| | Sbjct: 128646 cttggtcgatttggccatggtaggatcggcgcggatggcagcatggaccttcttgtacag 128587 Query: 411 tgcttccatgtcatcagctgagattcccttcttgatgtactcact 455 || ||||||| ||||||| ||||||||||||| ||||||||| Sbjct: 128586 tgattccatgccatcagcgtcaattcccttcttgaggtactcact 128542 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 133323 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 133264 Query: 702 aa 703 || Sbjct: 133263 aa 133262 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 277 tcgacgaggctggccttcctctcctcgtaggtgagcttcttggggttgta 326 |||||||| ||||||||||||| ||||||||| ||||||||| ||||||| Sbjct: 128806 tcgacgagactggccttcctctgctcgtaggtcagcttcttgaggttgta 128757 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/62 (88%) Strand = Plus / Minus Query: 642 gcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgcacgg 701 |||||||| |||||||||||||| || ||||| || || |||||||||||||| |||||| Sbjct: 128007 gcaccaaagacacggtttccagtggttgtcctaatgaggccaacatccaagagagcacgg 127948 Query: 702 aa 703 || Sbjct: 127947 aa 127946 Score = 58.0 bits (29), Expect = 4e-05 Identities = 83/101 (82%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggcaccagcagagttgttgagggcgttgagcctctcgacgagg 285 ||||||||||| || | |||||||||||| |||||| || || | || ||||| || Sbjct: 134187 tcctcgtcatcatcatcagcaccagcagaggagttgagagcattcaatctttcgacaaga 134128 Query: 286 ctggccttcctctcctcgtaggtgagcttcttggggttgta 326 ||||||||||||| |||||||| ||||||||| ||||||| Sbjct: 134127 ctggccttcctctgttcgtaggttagcttcttgaggttgta 134087
>emb|BX832617.1|CNS09YMN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH85ZA07 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1060 Score = 127 bits (64), Expect = 5e-26 Identities = 101/112 (90%), Gaps = 1/112 (0%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 |||||||||||||||||| ||||| || |||| | || ||||| |||||||||||||||| Sbjct: 573 gaaaccagcaaatctcttttcactttgaggga-tatcaagacctccgtccaaagctccct 515 Query: 637 taagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 | ||||||||||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 514 tgagtgcaccaaacacacgttttccagtggtagtcctgataagtccaacatc 463
>gb|AY365248.1| Cucumis sativus 60S ribosomal protein L5 mRNA, complete cds Length = 1171 Score = 113 bits (57), Expect = 8e-22 Identities = 109/125 (87%), Gaps = 1/125 (0%) Strand = Plus / Minus Query: 579 aaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccctta 638 |||||||||| |||||||||||||| || |||||||| ||||| |||||||||||||| Sbjct: 565 aaccagcaaacctcttgtcactgtgagg-aatgtccaatccaccatccaaagctcccttc 507 Query: 639 agtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatccaagagcgca 698 || |||||||| || ||||||||||| ||||| |||||||| |||||||| | ||| ||| Sbjct: 506 agagcaccaaaaacgcggtttccagttgtagttctgataagcccaacatcaaggagagca 447 Query: 699 cggaa 703 ||||| Sbjct: 446 cggaa 442 Score = 40.1 bits (20), Expect = 9.6 Identities = 42/48 (87%), Gaps = 1/48 (2%) Strand = Plus / Minus Query: 436 cccttcttgatgtactcacttgaagtgagtttggtacttctcgggttc 483 ||||||||||||||||| | ||||||||| ||| || ||||| ||||| Sbjct: 707 cccttcttgatgtactcgc-tgaagtgagattgatatttctcaggttc 661
>ref|NM_113448.2| Arabidopsis thaliana ATL5 (A. THALIANA RIBOSOMAL PROTEIN L5); structural constituent of ribosome AT3G25520 (ATL5) mRNA, complete cds Length = 1254 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 604 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 546 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 545 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 498 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT000411.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 969 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 542 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 484 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 483 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 436 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|BT008705.1| Arabidopsis thaliana At3g25520 gene, complete cds Length = 906 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 542 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 484 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 483 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 436 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY136319.1| Arabidopsis thaliana putative ribosomal protein (At3g25520) mRNA, complete cds Length = 1161 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 601 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 543 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 542 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 495 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 890 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 846
>gb|AY065103.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 1151 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 599 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 541 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 540 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 493 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|AY081701.1| Arabidopsis thaliana 60S ribosomal protein L5 (At3g25550) mRNA, complete cds Length = 925 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 542 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 484 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 483 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 436 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>gb|AY054161.1| Arabidopsis thaliana AT5g39740/MKM21_30 mRNA, complete cds Length = 1108 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 589 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 531 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 530 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 483 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 878 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 834
>gb|AY186611.1| Arabidopsis thaliana ribosomal protein L5 mRNA, complete cds Length = 906 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 542 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 484 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 483 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 436 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 831 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 787
>emb|BX823967.1|CNS0A6W1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH10ZG11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1076 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 574 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 516 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 515 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 468 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 863 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 819
>gb|AY087197.1| Arabidopsis thaliana clone 32753 mRNA, complete sequence Length = 1248 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 604 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 546 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 545 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 498 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 893 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 849
>gb|BT002427.1| Arabidopsis thaliana ribosomal protein, putative (At3g25520) mRNA, complete cds Length = 1117 Score = 111 bits (56), Expect = 3e-21 Identities = 96/108 (88%), Gaps = 1/108 (0%) Strand = Plus / Minus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctcccttaag 640 ||||||||||||||||||||||| |||| | || |||||||| |||||||| |||||||| Sbjct: 599 ccagcaaatctcttgtcactgtgaggga-tatcaagaccaccatccaaagcacccttaag 541 Query: 641 tgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 540 agcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 493 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 888 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 844
>gb|BT014015.1| Lycopersicon esculentum clone 133077F, mRNA sequence Length = 1274 Score = 91.7 bits (46), Expect = 3e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 618 ccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgata 677 ||||| ||||| || ||||| || |||||||||||||| |||||||| ||||| || ||| Sbjct: 617 ccaccatccaatgcacccttgagagcaccaaacacacgatttccagtagtagttctaata 558 Query: 678 agaccaacatccaagagcgcacggaa 703 ||||||||||||||||| |||||||| Sbjct: 557 agaccaacatccaagagagcacggaa 532 Score = 48.1 bits (24), Expect = 0.039 Identities = 39/44 (88%) Strand = Plus / Minus Query: 512 gcaacatgccctccatagatgtacttgcggtgaatctcagcatc 555 |||||||| || ||||| || ||||||||||||| ||||||||| Sbjct: 722 gcaacatggccaccatatatatacttgcggtgaacctcagcatc 679
>dbj|AB016876.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MKM21 Length = 44499 Score = 85.7 bits (43), Expect = 2e-13 Identities = 52/55 (94%) Strand = Plus / Minus Query: 634 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 |||| |||||||||||||||||||||||||| |||||||||||||| |||||||| Sbjct: 8034 ccttgagtgcaccaaacacacggtttccagtggtagtcctgataagtccaacatc 7980 Score = 71.9 bits (36), Expect = 3e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 577 gaaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||||||| ||| || || ||||| |||||||||||||||| Sbjct: 8206 gaaaccagcaaatctcttgtcactgtgaggg-atatcaagacctccgtccaaagctccct 8148
>dbj|AB049724.1| Pisum sativum ssa-15 mRNA for putative senescence-associated protein, complete cds Length = 1100 Score = 81.8 bits (41), Expect = 3e-12 Identities = 72/81 (88%), Gaps = 1/81 (1%) Strand = Plus / Minus Query: 578 aaaccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccctt 637 ||||||||||| || ||||||||||| || ||| |||| ||| || |||||||||||||| Sbjct: 607 aaaccagcaaaccttttgtcactgtgagg-aatatccaaacctccatccaaagctccctt 549 Query: 638 aagtgcaccaaacacacggtt 658 |||||||||||||||||||| Sbjct: 548 gagtgcaccaaacacacggtt 528 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 307 gtgagcttcttggggttgtacctcttgtg 335 ||||||||||| |||||||||||||||| Sbjct: 877 gtgagcttcttcaggttgtacctcttgtg 849
>emb|X95566.1|PS5SRNA P.sativum 5S rRNA gene Length = 1115 Score = 63.9 bits (32), Expect = 7e-07 Identities = 86/99 (86%), Gaps = 5/99 (5%) Strand = Plus / Minus Query: 562 cttctcgtccttcttg--aaaccagcaaatctcttgtcactgtgggggaatgtccagacc 619 |||||||||||| ||| ||||||||||| ||||||||||||| | ||||| |||| ||| Sbjct: 570 cttctcgtccttgttgcaaaaccagcaaacctcttgtcactgt-gaggaatatccaaacc 512 Query: 620 accgtccaaagc-tcccttaagtg-caccaaacacacgg 656 || |||||||| |||||| |||| |||||||||||||| Sbjct: 511 tccatccaaagcttcccttgagtgtcaccaaacacacgg 473
>dbj|AB025639.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone:MWL2 Length = 84896 Score = 61.9 bits (31), Expect = 3e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 634 ccttaagtgcaccaaacacacggtttccagtcgtagtcctgataagaccaacatc 688 ||||||| ||||| |||||||||||||| || || ||||||||||| |||||||| Sbjct: 56962 ccttaagagcaccgaacacacggtttcctgttgtggtcctgataagtccaacatc 57016 Score = 56.0 bits (28), Expect = 2e-04 Identities = 50/56 (89%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||||||||||||||| ||| || || |||||||| |||||||| |||| Sbjct: 56794 ccagcaaatctcttgtcactgtgaggg-atatcaagaccaccatccaaagcaccct 56848
>dbj|AB001583.1| Solanum melongena mRNA for ribosomal protein L5, partial cds Length = 399 Score = 58.0 bits (29), Expect = 4e-05 Identities = 47/53 (88%) Strand = Plus / Minus Query: 292 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttggg 344 |||||||| || ||||| |||||||| |||||||||||||||| |||||||| Sbjct: 288 ttcctctcttcataggtcagcttcttaaggttgtacctcttgtgtgtcttggg 236 Score = 50.1 bits (25), Expect = 0.010 Identities = 40/45 (88%) Strand = Plus / Minus Query: 501 tcatgtagtcagcaacatgccctccatagatgtacttgcggtgaa 545 ||||||| |||||||||| || |||||||| ||||||||||||| Sbjct: 80 tcatgtatgcagcaacatggccaccatagatatacttgcggtgaa 36 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 385 atggcagcgtgaaccttcttgta 407 ||||||||||||||||||||||| Sbjct: 195 atggcagcgtgaaccttcttgta 173
>gb|DQ228334.1| Solanum tuberosum clone 145F02 unknown mRNA Length = 1114 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 292 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 346 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 864 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 810 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 379 gcgcggatggcagcgtgaaccttcttgta 407 ||||| |||||||| |||||||||||||| Sbjct: 777 gcgcgtatggcagcatgaaccttcttgta 749
>gb|BT012733.1| Lycopersicon esculentum clone 113662F, mRNA sequence Length = 1161 Score = 54.0 bits (27), Expect = 6e-04 Identities = 48/55 (87%) Strand = Plus / Minus Query: 292 ttcctctcctcgtaggtgagcttcttggggttgtacctcttgtgagtcttgggag 346 |||||||| || || || |||||||| |||||||||||||||| |||||||||| Sbjct: 887 ttcctctcttcataagtcagcttcttaaggttgtacctcttgtgtgtcttgggag 833 Score = 44.1 bits (22), Expect = 0.62 Identities = 70/86 (81%) Strand = Plus / Minus Query: 618 ccaccgtccaaagctcccttaagtgcaccaaacacacggtttccagtcgtagtcctgata 677 ||||| ||||| || ||||| || ||||||||||||||||| || || ||||| || | Sbjct: 563 ccaccatccaatgcacccttgagagcaccaaacacacggttccctgtagtagttcttaag 504 Query: 678 agaccaacatccaagagcgcacggaa 703 || || || |||||||| |||||||| Sbjct: 503 aggccgacgtccaagagagcacggaa 478 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 510 cagcaacatgccctccatagatgtacttgcggtgaa 545 ||||||| || || |||||||| ||||||||||||| Sbjct: 670 cagcaacgtggccaccatagatatacttgcggtgaa 635
>dbj|AP004484.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT06I17, TM0017, complete sequence Length = 121127 Score = 50.1 bits (25), Expect = 0.010 Identities = 28/29 (96%) Strand = Plus / Plus Query: 289 gccttcctctcctcgtaggtgagcttctt 317 |||||||||||||| |||||||||||||| Sbjct: 46107 gccttcctctcctcataggtgagcttctt 46135 Score = 40.1 bits (20), Expect = 9.6 Identities = 48/56 (85%), Gaps = 1/56 (1%) Strand = Plus / Plus Query: 581 ccagcaaatctcttgtcactgtgggggaatgtccagaccaccgtccaaagctccct 636 ||||||||||| || ||||||| | ||||| |||||||| || ||||| ||||||| Sbjct: 46724 ccagcaaatcttttatcactgt-gaggaatatccagacccccatccaaggctccct 46778
>emb|Z99296.2|SPAC3H5 S.pombe chromosome I cosmid c3H5 Length = 34284 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 1285 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 1230
>ref|XM_780232.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein LOC580159 (LOC580159), mRNA Length = 1902 Score = 48.1 bits (24), Expect = 0.039 Identities = 24/24 (100%) Strand = Plus / Minus Query: 219 ctcgtcatcctcgtcatcgtcggc 242 |||||||||||||||||||||||| Sbjct: 1131 ctcgtcatcctcgtcatcgtcggc 1108 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 tcatcctcgtcatcgtcggc 242 |||||||||||||||||||| Sbjct: 1187 tcatcctcgtcatcgtcggc 1168
>emb|AL031528.1|SPBC11C11 S.pombe chromosome II cosmid c11C11 Length = 22500 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Plus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 20215 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 20270
>ref|NM_001022319.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPBC11C11.09c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 569
>ref|NM_001019604.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPAC3H5.12c), partial mRNA Length = 885 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 624 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 569
>gb|U48270.1|SPU48270 Schizosaccharomyces pombe ribosomal protein L5 gene, complete cds Length = 1238 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| || |||||| || ||||| |||||| Sbjct: 660 catgtattcagcaacatggccaccatagatatatttgcggagagtctcatcatcca 605
>dbj|AB016045.1| Schizosaccharomyces pombe mRNA for ribosomal protein L5 homolog, partial cds Length = 779 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 502 catgtagtcagcaacatgccctccatagatgtacttgcggtgaatctcagcatcca 557 |||||| ||||||||||| || |||||||| ||||| ||| || ||||| |||||| Sbjct: 486 catgtattcagcaacatgaccaccatagatatacttacggagagtctcatcatcca 431
>ref|XM_500389.1| Yarrowia lipolytica CLIB122, YALI0B01540g predicted mRNA Length = 210 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Minus Query: 218 actcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||||| Sbjct: 208 actcgtcatcctcgtcatcgtcg 186
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 46.1 bits (23), Expect = 0.16 Identities = 23/23 (100%) Strand = Plus / Plus Query: 218 actcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||||| Sbjct: 245151 actcgtcatcctcgtcatcgtcg 245173
>ref|XM_366233.1| Magnaporthe grisea 70-15 predicted protein (MG10452.4) partial mRNA Length = 738 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 223 tcatcctcgtcatcgtcggcggcaccagca 252 ||||| |||||||||||||||||| ||||| Sbjct: 452 tcatcgtcgtcatcgtcggcggcagcagca 423 Score = 44.1 bits (22), Expect = 0.62 Identities = 28/30 (93%) Strand = Plus / Minus Query: 223 tcatcctcgtcatcgtcggcggcaccagca 252 ||||| |||||||||||||||||| ||||| Sbjct: 383 tcatcgtcgtcatcgtcggcggcagcagca 354 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 229 tcgtcatcgtcggcggcaccagca 252 |||||||||||||||||| ||||| Sbjct: 653 tcgtcatcgtcggcggcagcagca 630
>ref|XM_363564.1| Magnaporthe grisea 70-15 hypothetical protein (MG01490.4) partial mRNA Length = 873 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 224 catcctcgtcatcgtcggcgg 244 ||||||||||||||||||||| Sbjct: 261 catcctcgtcatcgtcggcgg 281
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 150462 tcgtcatcctcgtcatcgtcg 150442
>emb|AJ296686.1|PAB296686 Picea abies ATC microsatellite DNA, clone EATC1A02 Length = 421 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 191 tcgtcatcctcgtcatcgtcg 211
>gb|AC146108.3| Pan troglodytes BAC clone RP43-22F10 from 7, complete sequence Length = 230349 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 69373 gaggctggccttcctctcctc 69393
>gb|AC146056.2| Pan troglodytes BAC clone RP43-89N11 from 7, complete sequence Length = 154447 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 112651 gaggctggccttcctctcctc 112671
>gb|AF513502.1| Homo sapiens STRA8 (STRA8) mRNA, complete cds Length = 993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>emb|AJ890137.1| Murid Herpesvirus 2 r138 gene (partial), r139 gene, r140 gene, r141 gene and r142 gene (partial) Length = 7462 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 3340 tcgtcatcctcgtcatcgtcg 3360
>gb|AC025483.7| Homo sapiens chromosome 15, clone RP11-398I10, complete sequence Length = 180096 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 aaaaacaagaaagggtgccag 40 ||||||||||||||||||||| Sbjct: 174337 aaaaacaagaaagggtgccag 174317
>ref|NM_182489.1| Homo sapiens STRA8 (LOC346673), mRNA Length = 993 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 588 gaggctggccttcctctcctc 568
>gb|AC023723.4| Drosophila melanogaster X BAC RP98-48E6 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179363 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 13719 tcgtcatcctcgtcatcgtcg 13699
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 111766 tcgtcatcctcgtcatcgtcg 111746
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 190797 tcgtcatcctcgtcatcgtcg 190817
>ref|NM_132413.1| Drosophila melanogaster CG15295-RA (CG15295), mRNA Length = 2288 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 962 tcgtcatcctcgtcatcgtcg 942
>gb|AC090083.3| Homo sapiens chromosome 15, clone CTD-2311K11, complete sequence Length = 96253 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 20 aaaaacaagaaagggtgccag 40 ||||||||||||||||||||| Sbjct: 25958 aaaaacaagaaagggtgccag 25938
>dbj|AK221847.1| Arabidopsis thaliana mRNA for ribosomal protein, complete cds, clone: RAFL22-05-O03 Length = 517 Score = 42.1 bits (21), Expect = 2.4 Identities = 39/45 (86%) Strand = Plus / Minus Query: 291 cttcctctcctcgtaggtgagcttcttggggttgtacctcttgtg 335 ||||||||||||||| || || ||||| ||||||||||||||| Sbjct: 262 cttcctctcctcgtaagtaagtttcttcaagttgtacctcttgtg 218
>gb|AC009542.2|AC009542 Homo sapiens clone RP11-260N14 from 7q31, complete sequence Length = 160367 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 92688 gaggctggccttcctctcctc 92668
>gb|AC009330.5|AC009330 Homo sapiens clone RP11-83M17 from 7q31, complete sequence Length = 174768 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 282 gaggctggccttcctctcctc 302 ||||||||||||||||||||| Sbjct: 89870 gaggctggccttcctctcctc 89850
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 130980 tcgtcatcctcgtcatcgtcg 131000
>gb|AY664418.1| Zea mays cultivar Mo17 locus 9008, complete sequence Length = 282600 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 115897 tcgtcatcctcgtcatcgtcg 115917
>gb|AY664414.1| Zea mays cultivar B73 locus 9008, complete sequence Length = 339089 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 220 tcgtcatcctcgtcatcgtcg 240 ||||||||||||||||||||| Sbjct: 129620 tcgtcatcctcgtcatcgtcg 129640
>gb|M60100.1|HRSMHDRA E.caballus MHC class II DR alpha chain (A2 haplotype) gene, 3' end Length = 2006 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 434 ttcccttcttgatgtactcac 454 ||||||||||||||||||||| Sbjct: 906 ttcccttcttgatgtactcac 926
>ref|NM_180473.1| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.2 mRNA, complete cds Length = 1170 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gacagaaaggaacaggtccg 142 |||||||||||||||||||| Sbjct: 677 gacagaaaggaacaggtccg 696
>ref|NM_121109.2| Arabidopsis thaliana unknown protein AT5G10710 transcript variant AT5G10710.1 mRNA, complete cds Length = 1270 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gacagaaaggaacaggtccg 142 |||||||||||||||||||| Sbjct: 777 gacagaaaggaacaggtccg 796
>ref|XM_467072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1424 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cttccatgtcatcagctgag 432 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>gb|AC113006.9| Mus musculus chromosome 16, clone RP23-332O12, complete sequence Length = 195941 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 421 tcatcagctgagattccctt 440 |||||||||||||||||||| Sbjct: 107257 tcatcagctgagattccctt 107276
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 cctcgtcatcgtcggcggca 246 |||||||||||||||||||| Sbjct: 302688 cctcgtcatcgtcggcggca 302669
>ref|XM_754221.1| Ustilago maydis 521 hypothetical protein (UM03167.1) partial mRNA Length = 2610 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtc 239 |||||||||||||||||||| Sbjct: 1748 tcgtcatcctcgtcatcgtc 1729
>ref|XM_754531.1| Ustilago maydis 521 hypothetical protein (UM03477.1) partial mRNA Length = 3900 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtc 239 |||||||||||||||||||| Sbjct: 1019 tcgtcatcctcgtcatcgtc 1000
>ref|XM_380961.1| Gibberella zeae PH-1 chromosome 1 hypothetical protein (FG00785.1) partial mRNA Length = 600 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 220 tcgtcatcctcgtcatcgtc 239 |||||||||||||||||||| Sbjct: 593 tcgtcatcctcgtcatcgtc 574
>gb|AF315713.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase mRNA, partial cds Length = 1767 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggc 245 |||||||||||||||||||| Sbjct: 323 tcctcgtcatcgtcggcggc 304
>emb|Z49967.1|CEF54C9 Caenorhabditis elegans Cosmid F54C9, complete sequence Length = 34842 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcatgtagtcagcaacatgc 520 |||||||||||||||||||| Sbjct: 16526 tcatgtagtcagcaacatgc 16507
>gb|AC161114.4| Mus musculus BAC clone RP24-338A5 from chromosome 12, complete sequence Length = 220746 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 gttgagggcgttgagcctct 277 |||||||||||||||||||| Sbjct: 125822 gttgagggcgttgagcctct 125841
>gb|AF360281.1| Arabidopsis thaliana unknown protein (At5g10710) mRNA, complete cds Length = 1285 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gacagaaaggaacaggtccg 142 |||||||||||||||||||| Sbjct: 776 gacagaaaggaacaggtccg 795
>gb|AC164004.3| Mus musculus chromosome 5, clone RP23-58C20, complete sequence Length = 198872 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 aagacagaaaggaacaggtc 140 |||||||||||||||||||| Sbjct: 112990 aagacagaaaggaacaggtc 112971
>gb|BC037840.2| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4814643) Length = 1531 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tggttgatttggccatgcta 372 |||||||||||||||||||| Sbjct: 447 tggttgatttggccatgcta 466
>gb|AY043490.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmg1) mRNA, complete cds Length = 1827 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggc 245 |||||||||||||||||||| Sbjct: 383 tcctcgtcatcgtcggcggc 364
>gb|BC047625.1| Homo sapiens cDNA clone IMAGE:4795909 Length = 2187 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 agcgtgaaccttcttgtaaactgc 413 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC036587.2| Homo sapiens cDNA clone IMAGE:4799072 Length = 2187 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 agcgtgaaccttcttgtaaactgc 413 |||||||||||| ||||||||||| Sbjct: 1284 agcgtgaaccttattgtaaactgc 1307
>gb|BC034036.1| Homo sapiens potassium inwardly-rectifying channel, subfamily J, member 10, mRNA (cDNA clone IMAGE:4811633), partial cds Length = 4424 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 353 tggttgatttggccatgcta 372 |||||||||||||||||||| Sbjct: 3333 tggttgatttggccatgcta 3352
>gb|AC100771.2| Homo sapiens chromosome 11, clone RP11-159H22, complete sequence Length = 177819 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 390 agcgtgaaccttcttgtaaactgc 413 ||||||||||||||||| |||||| Sbjct: 96341 agcgtgaaccttcttgtgaactgc 96318
>dbj|AB035927.1| Oryza sativa (japonica cultivar-group) GDH3 mRNA for glutamate dehydrogenase 3, complete cds Length = 1452 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cttccatgtcatcagctgag 432 |||||||||||||||||||| Sbjct: 412 cttccatgtcatcagctgag 393
>gb|AC026427.4| Homo sapiens chromosome 5 clone CTD-2193P3, complete sequence Length = 175838 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 caagatacccaagacagaaa 130 |||||||||||||||||||| Sbjct: 53284 caagatacccaagacagaaa 53303
>gb|AY039230.1| Malus x domestica 3-hydroxy-3-methylglutaryl coenzyme A reductase (hmgr) mRNA, complete cds Length = 2301 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggc 245 |||||||||||||||||||| Sbjct: 536 tcctcgtcatcgtcggcggc 517
>gb|AC020901.8|AC020901 Homo sapiens chromosome 5 clone CTC-527N11, complete sequence Length = 180636 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 111 caagatacccaagacagaaa 130 |||||||||||||||||||| Sbjct: 161539 caagatacccaagacagaaa 161558
>ref|NM_063410.2| Caenorhabditis elegans Ribosomal Protein, Large subunit family member (rpl-5) (rpl-5) mRNA, complete cds Length = 969 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 501 tcatgtagtcagcaacatgc 520 |||||||||||||||||||| Sbjct: 630 tcatgtagtcagcaacatgc 611
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 actcgtcatcctcgtcatcgtcggcggc 245 ||||||| |||||||| ||||||||||| Sbjct: 24219624 actcgtcctcctcgtcgtcgtcggcggc 24219597
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cttccatgtcatcagctgag 432 |||||||||||||||||||| Sbjct: 26259382 cttccatgtcatcagctgag 26259363
>gb|DQ022844.1| Oryza sativa (japonica cultivar-group) cytochrome P450 mRNA, complete cds Length = 1719 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 actcgtcatcctcgtcatcgtcggcggc 245 ||||||| |||||||| ||||||||||| Sbjct: 549 actcgtcctcctcgtcgtcgtcggcggc 576
>emb|BX830763.1|CNS09ZHR Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS20ZF05 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1195 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gacagaaaggaacaggtccg 142 |||||||||||||||||||| Sbjct: 734 gacagaaaggaacaggtccg 753
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome Length = 3052398 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 ctcgtcatcctcgtcatcgtcggcggca 246 |||||| || |||||||||||||||||| Sbjct: 2243576 ctcgtcttcatcgtcatcgtcggcggca 2243603
>gb|BT002314.1| Arabidopsis thaliana clone C104667 unknown protein (At5g10710) mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 123 gacagaaaggaacaggtccg 142 |||||||||||||||||||| Sbjct: 577 gacagaaaggaacaggtccg 596
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 261 gagggcgttgagcctctcga 280 |||||||||||||||||||| Sbjct: 433386 gagggcgttgagcctctcga 433367
>dbj|AP007203.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBb0012J10 Length = 132375 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cttccatgtcatcagctgag 432 |||||||||||||||||||| Sbjct: 82223 cttccatgtcatcagctgag 82204
>gb|AE005004.1| Halobacterium sp. NRC-1 section 35 of 170 of the complete genome Length = 11030 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 tcctcgtcatcgtcggcggc 245 |||||||||||||||||||| Sbjct: 5096 tcctcgtcatcgtcggcggc 5077
>dbj|AB125365.1| Corvus macrorhynchos DRD4 gene for dopamine receptor D4, exon 1, partial cds Length = 182 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 223 tcatcctcgtcatcgtcggcggca 246 |||||||| ||||||||||||||| Sbjct: 61 tcatcctcctcatcgtcggcggca 84
>dbj|AK121238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023096A02, full insert sequence Length = 1698 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 218 actcgtcatcctcgtcatcgtcggcggc 245 ||||||| |||||||| ||||||||||| Sbjct: 543 actcgtcctcctcgtcgtcgtcggcggc 570
>dbj|AK103028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033117C02, full insert sequence Length = 1424 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 413 cttccatgtcatcagctgag 432 |||||||||||||||||||| Sbjct: 386 cttccatgtcatcagctgag 367
>emb|BX842684.4| Zebrafish DNA sequence from clone DKEY-33I22 in linkage group 20, complete sequence Length = 140982 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 17 tttaaaaacaagaaagggtgccagacaa 44 |||||||| |||||||||||| |||||| Sbjct: 51770 tttaaaaagaagaaagggtgcaagacaa 51743
>gb|AC102476.14| Mus musculus chromosome 5, clone RP24-396L12, complete sequence Length = 181047 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 aagacagaaaggaacaggtc 140 |||||||||||||||||||| Sbjct: 168314 aagacagaaaggaacaggtc 168333
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 actcgtcatcctcgtcatcgtcggcggc 245 ||||||| |||||||| ||||||||||| Sbjct: 24147830 actcgtcctcctcgtcgtcgtcggcggc 24147803
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 218 actcgtcatcctcgtcatcgtcggcggc 245 ||||||| |||||||| ||||||||||| Sbjct: 104315 actcgtcctcctcgtcgtcgtcggcggc 104288
>gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome unknown, complete sequence Length = 162933 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 1 gatgaaaataatacgctttaaaaacaag 28 ||||||||||||| ||||| |||||||| Sbjct: 143893 gatgaaaataatatgctttgaaaacaag 143920
>emb|AL139194.7|CNS01DXB Human chromosome 14 DNA sequence BAC C-2190G12 of library CalTech-D from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157120 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 390 agcgtgaaccttcttgtaaactgc 413 |||||||||||| ||||||||||| Sbjct: 41652 agcgtgaaccttattgtaaactgc 41675 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,922,459 Number of Sequences: 3902068 Number of extensions: 5922459 Number of successful extensions: 107431 Number of sequences better than 10.0: 112 Number of HSP's better than 10.0 without gapping: 112 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 106835 Number of HSP's gapped (non-prelim): 533 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
