ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22g15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 ... 52 0.002
2gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, com... 44 0.53
3gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, co... 44 0.53
4emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, ... 44 0.53
5emb|CR356231.12| Zebrafish DNA sequence from clone CH211-232N7, ... 44 0.53
6emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chro... 44 0.53
7gb|AC145339.34| Pan troglodytes clone rp43-58e4, complete sequence 44 0.53
8gb|AC145336.18| Pan troglodytes clone rp43-33e5, complete sequence 44 0.53
9gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chrom... 44 0.53
10gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome... 42 2.1
11emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 i... 42 2.1
12ref|NM_079712.2| Drosophila melanogaster Insulin-like receptor C... 42 2.1
13gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, ... 42 2.1
14gb|AC110766.5| Homo sapiens BAC clone RP11-93M12 from 4, complet... 42 2.1
15gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, comp... 42 2.1
16gb|AC004470.2| Homo sapiens X BAC GS1-433O24 (Genome Systems Hum... 42 2.1
17gb|AC073989.6| Homo sapiens BAC clone RP11-473L20 from 2, comple... 42 2.1
18gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, c... 42 2.1
19emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 i... 42 2.1
20gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73... 42 2.1
21emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chro... 42 2.1
22emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chr... 42 2.1
23gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.3
24gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome 40 8.3
25ref|XM_568210.1| Cryptococcus neoformans var. neoformans JEC21 h... 40 8.3
26emb|AL449083.23| Human DNA sequence from clone RP11-434N3 on chr... 40 8.3
27emb|CR543861.1| Acinetobacter sp. ADP1 complete genome 40 8.3
28emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromoso... 40 8.3
29emb|AL732629.6| Zebrafish DNA sequence from clone CH211-146F4 in... 40 8.3
30emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete ... 40 8.3
31gb|U15186.1|MLU15186 Mycobacterium leprae cosmid L471 40 8.3
32gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete s... 40 8.3
33gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, comple... 40 8.3
34gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, comp... 40 8.3
35gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O... 40 8.3
36gb|AC100787.17| Homo sapiens chromosome 17, clone CTD-2589J4, co... 40 8.3
37dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
38gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome... 40 8.3
39dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 8.3
40dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
41dbj|AB073159.1| Arabidopsis thaliana DNA, chromosome 4 centromer... 40 8.3
42emb|BX000466.3| Zebrafish DNA sequence from clone CH211-13B10, c... 40 8.3
43gb|AE017226.1| Treponema denticola ATCC 35405, complete genome 40 8.3
44gb|AC134900.5| Mus musculus BAC clone RP23-249B22 from 10, compl... 40 8.3
45emb|AL831752.7| Mouse DNA sequence from clone RP23-414J22 on chr... 40 8.3 
>emb|AL954182.18| Zebrafish DNA sequence from clone CH211-205N18 in linkage group 20,
              complete sequence
          Length = 151552

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 26/26 (100%)
 Strand = Plus / Plus

                                        
Query: 99     acaaacaagcaaataaaagcaaacaa 124
              ||||||||||||||||||||||||||
Sbjct: 126297 acaaacaagcaaataaaagcaaacaa 126322



 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 99     acaaacaagcaaataaaagcaaacaa 124
              ||||||||||| ||||||||||||||
Sbjct: 126319 acaaacaagcatataaaagcaaacaa 126344
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>gb|AC118260.7| Mus musculus chromosome 5, clone RP24-374B14, complete sequence
          Length = 158892

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 99     acaaacaagcaaataaaagcaa 120
              ||||||||||||||||||||||
Sbjct: 122959 acaaacaagcaaataaaagcaa 122980
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>gb|AC123699.10| Mus musculus chromosome 5, clone RP23-333M22, complete sequence
          Length = 167971

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 99     acaaacaagcaaataaaagcaa 120
              ||||||||||||||||||||||
Sbjct: 155061 acaaacaagcaaataaaagcaa 155040
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>emb|BX950851.1| Erwinia carotovora subsp. atroseptica SCRI1043, complete genome
          Length = 5064019

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                         
Query: 497     catcagcccgaccagcgctgccacaa 522
               |||||||||||||||||| |||||||
Sbjct: 2897582 catcagcccgaccagcgccgccacaa 2897607
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>emb|CR356231.12| Zebrafish DNA sequence from clone CH211-232N7, complete sequence
          Length = 166203

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 99    acaaacaagcaaataaaagcaaacaa 124
             |||||||| |||||||||||||||||
Sbjct: 83494 acaaacaaacaaataaaagcaaacaa 83469
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>emb|AL662891.9| Mouse DNA sequence from clone RP23-20N14 on chromosome 11 Contains the
              Psme4 gene for proteasome (prosome, macropain) activator
              subunit 4, the Gpr75 gene for G protein-coupled receptor
              75, a novel pseudogene, a PDZ and LIM domain 1 (elfin)
              (Pdlim1) pseudogene, two novel genes, the 5' end of the
              Asb3 gene for ankyrin repeat and SOCS box-containing
              protein 3, a methyl-CpG binding domain protein 2
              interacting protein (Mbdin) pseudogene and a CpG island,
              complete sequence
          Length = 244971

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 99     acaaacaagcaaataaaagcaaacaa 124
              |||||||||||||||||| |||||||
Sbjct: 162450 acaaacaagcaaataaaaacaaacaa 162475
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>gb|AC145339.34| Pan troglodytes clone rp43-58e4, complete sequence
          Length = 150845

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 99     acaaacaagcaaataaaagcaaacaa 124
              |||||||||||||||||| |||||||
Sbjct: 110619 acaaacaagcaaataaaaacaaacaa 110594
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>gb|AC145336.18| Pan troglodytes clone rp43-33e5, complete sequence
          Length = 155317

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 99    acaaacaagcaaataaaagcaaacaa 124
             |||||||||||||||||| |||||||
Sbjct: 62952 acaaacaagcaaataaaaacaaacaa 62927
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>gb|AC159032.2| Pan troglodytes BAC clone CH251-358H13 from chromosome unknown, complete
              sequence
          Length = 183880

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 99     acaaacaagcaaataaaagcaaacaa 124
              |||||||||||||||||| |||||||
Sbjct: 176040 acaaacaagcaaataaaaacaaacaa 176065
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>gb|AC125146.3| Mus musculus BAC clone RP24-348B1 from chromosome 2, complete sequence
          Length = 212563

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 101    aaacaagcaaataaaagcaaacaag 125
              |||||||||||||||| ||||||||
Sbjct: 111977 aaacaagcaaataaaaacaaacaag 111953
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>emb|BX548058.9| Zebrafish DNA sequence from clone CH211-181H11 in linkage group 18,
             complete sequence
          Length = 95339

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 316   caaagacaacacaacagtcaa 336
             |||||||||||||||||||||
Sbjct: 54424 caaagacaacacaacagtcaa 54444
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>ref|NM_079712.2| Drosophila melanogaster Insulin-like receptor CG18402-RA (InR), mRNA
          Length = 7375

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 101  aaacaagcaaataaaagcaaa 121
            |||||||||||||||||||||
Sbjct: 7201 aaacaagcaaataaaagcaaa 7221
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>gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, region 93E4-93E7, BAC clone
              BACR48I01, complete sequence
          Length = 170535

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    aaacaagcaaataaaagcaaa 121
              |||||||||||||||||||||
Sbjct: 106541 aaacaagcaaataaaagcaaa 106521
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>gb|AC110766.5| Homo sapiens BAC clone RP11-93M12 from 4, complete sequence
          Length = 169442

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 99    acaaacaagcaaataaaagca 119
             |||||||||||||||||||||
Sbjct: 66578 acaaacaagcaaataaaagca 66558
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>gb|AC099699.16| Mus musculus chromosome 7, clone RP23-32A8, complete sequence
          Length = 195263

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 40     aaagactcaactgactgatca 60
              |||||||||||||||||||||
Sbjct: 145707 aaagactcaactgactgatca 145687
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>gb|AC004470.2| Homo sapiens X BAC GS1-433O24 (Genome Systems Human BAC Library) complete
              sequence
          Length = 206809

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 64     ctctcatacatagaaaaatagaaca 88
              |||||||| ||||||||||||||||
Sbjct: 163125 ctctcatatatagaaaaatagaaca 163101
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>gb|AC073989.6| Homo sapiens BAC clone RP11-473L20 from 2, complete sequence
          Length = 99369

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 279  cagttcttcttcatcttgcag 299
            |||||||||||||||||||||
Sbjct: 6102 cagttcttcttcatcttgcag 6122
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>gb|AC084541.1|CBRG27D19 Caenorhabditis briggsae cosmid G27D19, complete sequence
          Length = 40961

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 537   agcattgctgctgccatgacc 557
             |||||||||||||||||||||
Sbjct: 16394 agcattgctgctgccatgacc 16414
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>emb|BX548060.7| Zebrafish DNA sequence from clone CH211-117I10 in linkage group 18,
            complete sequence
          Length = 120346

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 316  caaagacaacacaacagtcaa 336
            |||||||||||||||||||||
Sbjct: 8337 caaagacaacacaacagtcaa 8317
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>gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73 of 118 of the complete
              sequence
          Length = 255463

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 101    aaacaagcaaataaaagcaaa 121
              |||||||||||||||||||||
Sbjct: 108378 aaacaagcaaataaaagcaaa 108358
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>emb|AL773530.9| Mouse DNA sequence from clone RP23-180A8 on chromosome 2, complete
             sequence
          Length = 188424

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 99    acaaacaagcaaataaaagca 119
             |||||||||||||||||||||
Sbjct: 39247 acaaacaagcaaataaaagca 39267
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>emb|AL953900.7| Mouse DNA sequence from clone RP24-166A20 on chromosome 2, complete
             sequence
          Length = 131582

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 101   aaacaagcaaataaaagcaaacaag 125
             |||||||||||||||| ||||||||
Sbjct: 13909 aaacaagcaaataaaaacaaacaag 13933
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>gb|AE017352.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 12, complete
             sequence
          Length = 906719

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 276   ttccagttcttcttcatctt 295
             ||||||||||||||||||||
Sbjct: 84017 ttccagttcttcttcatctt 84036
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>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 271    gagccttccagttcttcttc 290
              ||||||||||||||||||||
Sbjct: 882317 gagccttccagttcttcttc 882298
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>ref|XM_568210.1| Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
            (CNL03950) partial mRNA
          Length = 3228

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 276  ttccagttcttcttcatctt 295
            ||||||||||||||||||||
Sbjct: 1356 ttccagttcttcttcatctt 1337
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>emb|AL449083.23| Human DNA sequence from clone RP11-434N3 on chromosome 9, complete
              sequence
          Length = 128945

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 102    aacaagcaaataaaagcaaa 121
              ||||||||||||||||||||
Sbjct: 124809 aacaagcaaataaaagcaaa 124828
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>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome
          Length = 3598621

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 15      atttattctgattggtacaa 34
               ||||||||||||||||||||
Sbjct: 1623940 atttattctgattggtacaa 1623959
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>emb|CR382121.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome A of strain NRRL
              Y-1140 of Kluyveromyces lactis
          Length = 1062590

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 64     ctctcatacatagaaaaata 83
              ||||||||||||||||||||
Sbjct: 323240 ctctcatacatagaaaaata 323259
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>emb|AL732629.6| Zebrafish DNA sequence from clone CH211-146F4 in linkage group 12
             Contains a novel gene similar to human BAP28, a putative
             novel gene, a novel gene similar to human ARG1 (liver
             arginase), a novel gene similar to human and rodent P4HA1
             (procollagen-proline, 2-oxoglutarate 4-dioxygenase
             (proline 4-hydroxylase), alpha polypeptide I), a novel
             gene for a protein with a NUDIX domain and four CpG
             islands, complete sequence
          Length = 164474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 409   tgtagcacgcattcacgacattct 432
             |||||||||||||||| |||||||
Sbjct: 45945 tgtagcacgcattcactacattct 45968
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>emb|AL583920.1|MLEPRTN4 Mycobacterium leprae strain TN complete genome; segment 4/10
          Length = 348450

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 538    gcattgctgctgccatgacc 557
              ||||||||||||||||||||
Sbjct: 340298 gcattgctgctgccatgacc 340317
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>gb|U15186.1|MLU15186 Mycobacterium leprae cosmid L471
          Length = 36241

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 538  gcattgctgctgccatgacc 557
            ||||||||||||||||||||
Sbjct: 4845 gcattgctgctgccatgacc 4826
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>gb|AC025726.2| Caenorhabditis elegans cosmid Y71G12B, complete sequence
          Length = 191954

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    tacatagaaaaatagaacat 89
             ||||||||||||||||||||
Sbjct: 46733 tacatagaaaaatagaacat 46714
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>gb|AC018884.6| Homo sapiens BAC clone RP11-369I16 from 4, complete sequence
          Length = 166300

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     atacatagaaaaatagaaca 88
              ||||||||||||||||||||
Sbjct: 146541 atacatagaaaaatagaaca 146560
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>gb|AC008900.5| Homo sapiens chromosome 5 clone CTD-2242C17, complete sequence
          Length = 166253

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 217   actagcaggccttctccctg 236
             ||||||||||||||||||||
Sbjct: 45380 actagcaggccttctccctg 45361
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>gb|AC026230.5|AC026230 Homo sapiens chromosome 5 clone CTD-2288O8, complete sequence
          Length = 114802

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 217  actagcaggccttctccctg 236
            ||||||||||||||||||||
Sbjct: 7045 actagcaggccttctccctg 7064
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>gb|AC100787.17| Homo sapiens chromosome 17, clone CTD-2589J4, complete sequence
          Length = 233062

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 297    cagaggcacgagtggcctcc 316
              ||||||||||||||||||||
Sbjct: 138582 cagaggcacgagtggcctcc 138601
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 452     cggcgcaccaccggcggcgg 471
               ||||||||||||||||||||
Sbjct: 8871863 cggcgcaccaccggcggcgg 8871882
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>gb|AC133645.5| Mus musculus BAC clone RP23-73O10 from chromosome 5, complete sequence
          Length = 207846

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 99    acaaacaagcaaataaaagcaaac 122
             |||||||| |||||||||||||||
Sbjct: 83134 acaaacaaacaaataaaagcaaac 83111
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 498     atcagcccgaccagcgctgc 517
               ||||||||||||||||||||
Sbjct: 7592643 atcagcccgaccagcgctgc 7592662
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>dbj|AP004801.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0613F08
          Length = 142937

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 452   cggcgcaccaccggcggcgg 471
             ||||||||||||||||||||
Sbjct: 76881 cggcgcaccaccggcggcgg 76900
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>dbj|AB073159.1| Arabidopsis thaliana DNA, chromosome 4 centromere region, BAC
             clone:T2P22
          Length = 81019

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aacaagcaaataaaagcaaa 121
             ||||||||||||||||||||
Sbjct: 76725 aacaagcaaataaaagcaaa 76744
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>emb|BX000466.3| Zebrafish DNA sequence from clone CH211-13B10, complete sequence
          Length = 159849

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 409   tgtagcacgcattcacgacattct 432
             |||||||||||||||| |||||||
Sbjct: 53947 tgtagcacgcattcactacattct 53924
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>gb|AE017226.1| Treponema denticola ATCC 35405, complete genome
          Length = 2843201

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 96      atgacaaacaagcaaataaa 115
               ||||||||||||||||||||
Sbjct: 1540361 atgacaaacaagcaaataaa 1540380
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>gb|AC134900.5| Mus musculus BAC clone RP23-249B22 from 10, complete sequence
          Length = 213095

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   gacattctgatcaacaatgt 444
             ||||||||||||||||||||
Sbjct: 73783 gacattctgatcaacaatgt 73764
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>emb|AL831752.7| Mouse DNA sequence from clone RP23-414J22 on chromosome X, complete
             sequence
          Length = 169807

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   aaacaagcaaataaaagcaaacaa 124
             |||||||||||||||| |||||||
Sbjct: 62615 aaacaagcaaataaaaacaaacaa 62592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,345,915
Number of Sequences: 3902068
Number of extensions: 5345915
Number of successful extensions: 118850
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 118590
Number of HSP's gapped (non-prelim): 260
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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