>THIC2_METAC (Q8TPW4) Thiamine biosynthesis protein thiC 2|
          Length = 428

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +3

Query: 168 AGTEKLTQINGLLLLPSNGRRKMIPFSLGMSISRKI 275
           A T +     GL+ +P N RR+ +P  +G  +S KI
Sbjct: 27  AETVRSCVAKGLIAIPKNNRRETLPIGIGKYMSTKI 62

>CYB_PICPJ (Q36507) Cytochrome b|
          Length = 386

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 226 LPFEGNSKSPFIWVSFSV 173
           +PF GN   PFIW SFSV
Sbjct: 154 IPFIGNDLVPFIWGSFSV 171

>MMP1_MYCLE (P46841) Major membrane protein I (MMP-I) (35 kDa antigen)|
          Length = 307

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 20/75 (26%), Positives = 32/75 (42%)
 Frame = +2

Query: 2   KILNKYTXTADSMTKMYRLDNQTTTIRKPRELGCADD*DLLYELLFPCTPNSHATCWYGK 181
           ++ + Y+   D +T+  RL  +T   R+  EL  + +    + LL   TP      + G 
Sbjct: 104 RVSDLYSSPHDQITQQLRLTIETIKERQECELVNSPE----FGLLAQVTPEQTIRTFAGA 159

Query: 182 ANPDKRTLAITLEWK 226
             PD     IT  WK
Sbjct: 160 PTPDDLDALITKVWK 174

>Y2095_RHIME (Q52999) Hypothetical protein R02095|
          Length = 1029

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 10/61 (16%)
 Frame = +2

Query: 131 LLFPCTPNSHATCWYGKANP----------DKRTLAITLEWKEKNDPFLPWDVDFSEDLS 280
           LL   +  S+A+ W   ANP          D+  LAI  +W E     LP   D +E +S
Sbjct: 414 LLVTTSRPSYASEWLDAANPTRLALRPLDSDETRLAIKAKWPEHRLALLPDLFDATERIS 473

Query: 281 G 283
           G
Sbjct: 474 G 474

>HPRK_XYLFT (Q87DP7) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 316

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 57  WTTKQQQSANQ-ES*DVQTIRIFCMSFCSLVHPTVTQLAGTEKLTQINGL 203
           W   QQ    Q +S D +  R     + + ++P   Q+ GTE+LT ++ L
Sbjct: 22  WIAGQQGEHRQIDSGDTRARRPSLAGYLNTIYPNKVQILGTEELTWLDSL 71

>HPRK_XYLFA (Q9PDH3) HPr kinase/phosphorylase (EC 2.7.11.-) (EC 2.7.4.-)|
           (HPrK/P) (HPr(Ser) kinase/phosphorylase)
          Length = 316

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 15/50 (30%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 57  WTTKQQQSANQ-ES*DVQTIRIFCMSFCSLVHPTVTQLAGTEKLTQINGL 203
           W   QQ    Q +S D +  R     + + ++P   Q+ GTE+LT ++ L
Sbjct: 22  WIAGQQGEHRQIDSGDTRARRPSLAGYLNTIYPNKVQILGTEELTWLDSL 71

>ATG15_EMENI (Q5B0L1) Putative lipase atg15 (EC 3.1.1.3) (Autophagy-related|
           protein 15)
          Length = 590

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 4/71 (5%)
 Frame = +2

Query: 20  TXTADSMTKMYRLDNQTTTIRKPRELGCADD*DLLYELLFPCTPNSHATC----WYGKAN 187
           T ++ + T       +TTT + P   GC DD           T +S  TC    W+G  +
Sbjct: 460 TTSSTTTTSTITTSTRTTTCKTPGWWGCLDDSTTTDPPTTTTTTSS--TCKTPGWFGCKD 517

Query: 188 PDKRTLAITLE 220
           P   T   T E
Sbjct: 518 PTSTTATTTTE 528

>GTF2I_HUMAN (P78347) General transcription factor II-I (GTFII-I) (TFII-I)|
           (Bruton tyrosine kinase-associated protein 135)
           (BTK-associated protein 135) (BAP-135)
           (SRF-Phox1-interacting protein) (SPIN) (Williams-Beuren
           syndrome chromosome region 6 protein)
          Length = 998

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +1

Query: 1   KNPQ*IYXNSRFYD*NVPFGQPNNNNPQTKRAR 99
           K P+    NS+  +  V    PNNNNPQT   R
Sbjct: 670 KRPRSPGSNSKVPEIEVTVEGPNNNNPQTSAVR 702


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,001,568
Number of Sequences: 219361
Number of extensions: 799262
Number of successful extensions: 2576
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2576
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)