| Clone Name | rbags22f23 |
|---|---|
| Clone Library Name | barley_pub |
>TAP46_ARATH (Q8LDQ4) PP2A regulatory subunit TAP46 (2A phosphatase-associated| protein of 46 kDa) Length = 405 Score = 197 bits (502), Expect = 2e-50 Identities = 98/157 (62%), Positives = 114/157 (72%), Gaps = 7/157 (4%) Frame = -2 Query: 613 HHNAASRAPYSKPAAPITCATFAQDVIEGRASVSQAHDHKHQPLIFGPASLVGGGLTSER 434 H +AA+R YSKPA PITCATFAQDV+EGRASVSQ H+HK+QPLIFGPAS+VGG L++ER Sbjct: 249 HRDAAARIQYSKPAQPITCATFAQDVLEGRASVSQGHEHKNQPLIFGPASIVGGPLSTER 308 Query: 433 ERMAAQVFQPSFRMPTMSIEQAGLAEMKMMEQWQESTAKMIQEASSSWH-------KDDT 275 ERM AQVFQPS RMPTM IE AGL EM +M WQE T K I+EA++SW+ K++ Sbjct: 309 ERMIAQVFQPSHRMPTMCIEDAGLTEMNIMNDWQEQTKKAIEEATTSWYNDKPLRRKEED 368 Query: 274 SLXXXXXXXXXXXXXXXXDWKDENPRGAGNKKLTPCG 164 DWKD+NPRGAGNKKLTPCG Sbjct: 369 EEDDDEDEEAVMKARAFDDWKDDNPRGAGNKKLTPCG 405
>SRP_DROME (P52172) Box A-binding factor (ABF) (GATA-binding factor-B)| (Transcription factor GATA-B) (dGATA-B) (Protein serpent) Length = 1264 Score = 32.3 bits (72), Expect = 1.1 Identities = 23/75 (30%), Positives = 37/75 (49%) Frame = -1 Query: 542 RRH*RQSKCFTSS*PQTPTPDIWTCKSCWWGTHQ*EGKNGSTSFSA*FQDADNEHRTSRP 363 ++H +Q C P TPT I+ S THQ N + + S+ F + +N + +S Sbjct: 992 QQHQQQQSCSMQHSPSTPT-SIFNTPS---PTHQLHNNNNNNNNSSIFNNNNNNNSSS-- 1045 Query: 362 S*NENDGAMARKYRQ 318 NEN+ + +KY Q Sbjct: 1046 --NENNNKLIQKYLQ 1058
>VDH_STRCO (Q06539) Valine dehydrogenase (EC 1.4.1.-) (ValDH)| Length = 363 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +1 Query: 442 W*VPHQQDLQVQISGVGVCGHELVKHLL 525 W P +D V I+GVG GH LV+HLL Sbjct: 176 WGDPTLRDRTVGIAGVGKVGHHLVEHLL 203
>VDH_STRAL (O69056) Valine dehydrogenase (EC 1.4.1.-) (ValDH)| Length = 363 Score = 31.6 bits (70), Expect = 1.9 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = +1 Query: 442 W*VPHQQDLQVQISGVGVCGHELVKHLL 525 W P +D V I+GVG GH LV+HLL Sbjct: 176 WGDPTLRDRTVGIAGVGKVGHHLVEHLL 203
>CTBP_DROME (O46036) C-terminal-binding protein (CtBP protein) (dCtBP)| Length = 476 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/61 (31%), Positives = 27/61 (44%) Frame = -2 Query: 595 RAPYSKPAAPITCATFAQDVIEGRASVSQAHDHKHQPLIFGPASLVGGGLTSERERMAAQ 416 R P + A + A + + + RA + HD H G S VGGG T+ + AA Sbjct: 358 RTPPAAAAGGVAAAVYPEGALHHRAHSTTPHDGPHSTTNLG--STVGGGPTTVAQAAAAA 415 Query: 415 V 413 V Sbjct: 416 V 416
>NAGZ_VIBCH (Q9KU37) Beta-hexosaminidase (EC 3.2.1.52)| (N-acetyl-beta-glucosaminidase) (Beta-N-acetylhexosaminidase) Length = 330 Score = 30.4 bits (67), Expect = 4.3 Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 10/89 (11%) Frame = -2 Query: 550 FAQDV-IEGRASVSQAHDHKHQPLIFGPASLVGGGLTSERERMAAQVFQPSFRMPTMSIE 374 F+ D+ +EG A + + HQ L+ G + L + A +V +P M + Sbjct: 240 FSDDLSMEGAAVMGGPVERSHQALVAGCDMI----LICNKREAAVEVLD---NLPIMEVP 292 Query: 373 QA---------GLAEMKMMEQWQESTAKM 314 QA +E+K +E+WQ+++A M Sbjct: 293 QAEALLKKQQFSYSELKRLERWQQASANM 321
>MEGF8_HUMAN (Q7Z7M0) Multiple epidermal growth factor-like domains 8 (EGF-like| domain-containing protein 4) (Multiple EGF-like domain protein 4) Length = 2386 Score = 30.0 bits (66), Expect = 5.6 Identities = 21/53 (39%), Positives = 28/53 (52%) Frame = +3 Query: 354 ISARPACSMLIVGILKLG*KTCAAILSLSLVSPPPTRLAGPNIRGWCLWS*AC 512 + A PA S L +G L LG C A L+ S + PP GP GWC+ + +C Sbjct: 135 LGACPAASCLGLGRL-LG--DCQACLAFSSPTAPPR---GPGTLGWCVHNESC 181
>VDH_STRCM (Q53872) Valine dehydrogenase (EC 1.4.1.-) (ValDH)| Length = 358 Score = 29.6 bits (65), Expect = 7.3 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +1 Query: 442 W*VPHQQDLQVQISGVGVCGHELVKHLL 525 W P + +V ++GVG GH LV+HLL Sbjct: 174 WGDPSLRGRKVGVAGVGKVGHHLVEHLL 201
>Z20D2_MOUSE (O88878) Zinc finger A20 domain-containing protein 2 (Zinc finger| protein 216) Length = 213 Score = 29.3 bits (64), Expect = 9.6 Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 7/71 (9%) Frame = -1 Query: 605 CCQPCTIFQTSCSNHLCNFCSRRH*-------RQSKCFTSS*PQTPTPDIWTCKSCWWGT 447 C C + +N +C+ C + H R S T+S +PT D + + G Sbjct: 14 CSTGCGFYGNPRTNGMCSVCYKEHLQRQQNSGRMSPMGTASGSNSPTSDSASVQRADAGL 73 Query: 446 HQ*EGKNGSTS 414 + EG GSTS Sbjct: 74 NNCEGAAGSTS 84 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 85,359,316 Number of Sequences: 219361 Number of extensions: 1615155 Number of successful extensions: 3792 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3684 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3789 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)