| Clone Name | rbags22f23 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY224436.1| Oryza sativa (japonica cultivar-group) isolate 21639 PP2A regulatory subunit-like protein mRNA, complete cds Length = 1257 Score = 454 bits (229), Expect = e-124 Identities = 397/453 (87%) Strand = Plus / Minus Query: 162 tagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtca 221 |||||||| ||||| ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 1256 tagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtca 1197 Query: 222 tcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtca 281 |||||||| ||||||||||||||||| |||||||| || || || || | | | || || Sbjct: 1196 tcccatgctcttgctttctcctcttcagcgtcctcatcctcttgggctgaccgactgcca 1137 Query: 282 tccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattgc 341 ||||||||||| | |||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 1136 tccttgtgccatgcggagtttgattcttgaatcatcttagcagttctttcttgccatttc 1077 Query: 342 tccatcattttcatttcagctaggccggcttgttcgatgctcattgtcggcatcctgaaa 401 |||||||||||||| ||| || ||| |||| ||| |||||||| || |||| |||| || Sbjct: 1076 tccatcattttcatctcacgtaagccagcttcttctatgctcatcgttggcaacctgtaa 1017 Query: 402 ctaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaaca 461 || |||||||||||||||||||||||||| || || |||||||| ||||| ||||||||| Sbjct: 1016 cttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaaca 957 Query: 462 agacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacactt 521 ||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||||| Sbjct: 956 agacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacactt 897 Query: 522 gctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggtttg 581 ||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||| ||| Sbjct: 896 gctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggcttg 837 Query: 582 gaatatggtgcacggctggcagcattatggtgc 614 ||||||||||||||| ||||||||||||||||| Sbjct: 836 gaatatggtgcacggttggcagcattatggtgc 804
>dbj|AK070934.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023064K13, full insert sequence Length = 1578 Score = 448 bits (226), Expect = e-122 Identities = 397/454 (87%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 1373 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 1314 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 1313 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 1254 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 1253 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 1194 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcattgtcggcatcctgaa 400 ||||||||||||||| ||| || ||| |||| ||| |||||||| || |||| ||| | Sbjct: 1193 ctccatcattttcatctcacgtaagccagcttcttctatgctcatcgttggcaacctata 1134 Query: 401 actaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaac 460 ||| |||||||||||||||||||||||||| || || |||||||| ||||| |||||||| Sbjct: 1133 acttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaac 1074 Query: 461 aagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacact 520 |||||||||||| ||||||||||| || ||||||||||| ||||| |||||||||||||| Sbjct: 1073 aagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacact 1014 Query: 521 tgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggttt 580 |||||| ||||||||||| ||||||||||| |||||||||||||||||| |||||||||| Sbjct: 1013 tgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggttt 954 Query: 581 ggaatatggtgcacggctggcagcattatggtgc 614 ||| |||||||||||| ||||||||||||||||| Sbjct: 953 ggagtatggtgcacggttggcagcattatggtgc 920
>dbj|AK058901.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-008-A08, full insert sequence Length = 1383 Score = 297 bits (150), Expect = 2e-77 Identities = 222/246 (90%) Strand = Plus / Minus Query: 369 gcttgttcgatgctcattgtcggcatcctgaaactaggctgaaaaacttgtgctgccatt 428 |||| ||| |||||||| || |||| ||| |||| |||||||||||||||||||||||| Sbjct: 1117 gcttcttctatgctcatcgttggcaacctataacttggctgaaaaacttgtgctgccatt 1058 Query: 429 ctttccctctcactggtgagtcccccaccaacaagacttgcaggtccaaatatcaggggt 488 || || || |||||||| ||||| |||||||||||||||||||| ||||||||||| || Sbjct: 1057 ctctctctttcactggttagtcctccaccaacaagacttgcagggccaaatatcagcggc 998 Query: 489 tggtgtttgtggtcatgagcttgtgaaacacttgctctgccttcaatgacgtcttgagca 548 ||||||||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||| Sbjct: 997 tggtgtttgtgctcatgtgcttgtgaaacacttgctctaccttcaatgacatcttgagca 938 Query: 549 aaagttgcacaagtgattggagcagctggtttggaatatggtgcacggctggcagcatta 608 || |||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||| Sbjct: 937 aatgttgcacaagtgattggatcagctggtttggagtatggtgcacggttggcagcatta 878 Query: 609 tggtgc 614 |||||| Sbjct: 877 tggtgc 872 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 1178 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 1119 Query: 221 a 221 | Sbjct: 1118 a 1118
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 293 bits (148), Expect = 3e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 395 cctgaaactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtccccc 454 |||| |||| |||||||||||||||||||||||||| || || |||||||| ||||| || Sbjct: 1819563 cctgtaacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctcc 1819504 Query: 455 accaacaagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 |||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 1819503 accaacaagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtga 1819444 Query: 515 aacacttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagc 574 |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 1819443 aacacttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagc 1819384 Query: 575 tggtttggaatatggtgcacggctggcagcattatggtgc 614 ||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1819383 tggcttggaatatggtgcacggttggcagcattatggtgc 1819344 Score = 167 bits (84), Expect = 5e-38 Identities = 189/224 (84%) Strand = Plus / Minus Query: 162 tagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtca 221 |||||||| ||||| ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 1820508 tagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtca 1820449 Query: 222 tcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtca 281 |||||||| ||||||||||||||||| |||||||| || || || || | | | || || Sbjct: 1820448 tcccatgctcttgctttctcctcttcagcgtcctcatcctcttgggctgaccgactgcca 1820389 Query: 282 tccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattgc 341 ||||||||||| | |||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 1820388 tccttgtgccatgcggagtttgattcttgaatcatcttagcagttctttcttgccatttc 1820329 Query: 342 tccatcattttcatttcagctaggccggcttgttcgatgctcat 385 |||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 1820328 tccatcattttcatctcacgtaagccagcttcttctatgctcat 1820285
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 293 bits (148), Expect = 3e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 395 cctgaaactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtccccc 454 |||| |||| |||||||||||||||||||||||||| || || |||||||| ||||| || Sbjct: 1819541 cctgtaacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctcc 1819482 Query: 455 accaacaagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 |||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 1819481 accaacaagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtga 1819422 Query: 515 aacacttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagc 574 |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 1819421 aacacttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagc 1819362 Query: 575 tggtttggaatatggtgcacggctggcagcattatggtgc 614 ||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1819361 tggcttggaatatggtgcacggttggcagcattatggtgc 1819322 Score = 167 bits (84), Expect = 5e-38 Identities = 189/224 (84%) Strand = Plus / Minus Query: 162 tagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtca 221 |||||||| ||||| ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 1820486 tagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtca 1820427 Query: 222 tcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtca 281 |||||||| ||||||||||||||||| |||||||| || || || || | | | || || Sbjct: 1820426 tcccatgctcttgctttctcctcttcagcgtcctcatcctcttgggctgaccgactgcca 1820367 Query: 282 tccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattgc 341 ||||||||||| | |||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 1820366 tccttgtgccatgcggagtttgattcttgaatcatcttagcagttctttcttgccatttc 1820307 Query: 342 tccatcattttcatttcagctaggccggcttgttcgatgctcat 385 |||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 1820306 tccatcattttcatctcacgtaagccagcttcttctatgctcat 1820263
>emb|AL935154.2|CNS08CCP Oryza sativa chromosome 12, . BAC OSJNBb0109O08 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 128619 Score = 293 bits (148), Expect = 3e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 395 cctgaaactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtccccc 454 |||| |||| |||||||||||||||||||||||||| || || |||||||| ||||| || Sbjct: 14281 cctgtaacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctcc 14222 Query: 455 accaacaagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 |||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 14221 accaacaagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtga 14162 Query: 515 aacacttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagc 574 |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 14161 aacacttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagc 14102 Query: 575 tggtttggaatatggtgcacggctggcagcattatggtgc 614 ||| |||||||||||||||||| ||||||||||||||||| Sbjct: 14101 tggcttggaatatggtgcacggttggcagcattatggtgc 14062 Score = 167 bits (84), Expect = 5e-38 Identities = 189/224 (84%) Strand = Plus / Minus Query: 162 tagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtca 221 |||||||| ||||| ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 15226 tagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtca 15167 Query: 222 tcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtca 281 |||||||| ||||||||||||||||| |||||||| || || || || | | | || || Sbjct: 15166 tcccatgctcttgctttctcctcttcagcgtcctcatcctcttgggctgaccgactgcca 15107 Query: 282 tccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattgc 341 ||||||||||| | |||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 15106 tccttgtgccatgcggagtttgattcttgaatcatcttagcagttctttcttgccatttc 15047 Query: 342 tccatcattttcatttcagctaggccggcttgttcgatgctcat 385 |||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 15046 tccatcattttcatctcacgtaagccagcttcttctatgctcat 15003
>emb|BX000502.2|CNS08CDS Oryza sativa chromosome 12, . BAC OSJNBb0041E01 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132026 Score = 293 bits (148), Expect = 3e-76 Identities = 202/220 (91%) Strand = Plus / Plus Query: 395 cctgaaactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtccccc 454 |||| |||| |||||||||||||||||||||||||| || || |||||||| ||||| || Sbjct: 20919 cctgtaacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctcc 20978 Query: 455 accaacaagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 |||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||||| Sbjct: 20979 accaacaagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtga 21038 Query: 515 aacacttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagc 574 |||||||||||| ||||||||||| ||||||||||| |||||||||||||||||| |||| Sbjct: 21039 aacacttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagc 21098 Query: 575 tggtttggaatatggtgcacggctggcagcattatggtgc 614 ||| |||||||||||||||||| ||||||||||||||||| Sbjct: 21099 tggcttggaatatggtgcacggttggcagcattatggtgc 21138 Score = 167 bits (84), Expect = 5e-38 Identities = 189/224 (84%) Strand = Plus / Plus Query: 162 tagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtca 221 |||||||| ||||| ||||||||||||||||| || || ||||| || |||||||||||| Sbjct: 19974 tagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtca 20033 Query: 222 tcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtca 281 |||||||| ||||||||||||||||| |||||||| || || || || | | | || || Sbjct: 20034 tcccatgctcttgctttctcctcttcagcgtcctcatcctcttgggctgaccgactgcca 20093 Query: 282 tccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattgc 341 ||||||||||| | |||| ||| |||||||||||||| || || ||||||||||||| | Sbjct: 20094 tccttgtgccatgcggagtttgattcttgaatcatcttagcagttctttcttgccatttc 20153 Query: 342 tccatcattttcatttcagctaggccggcttgttcgatgctcat 385 |||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 20154 tccatcattttcatctcacgtaagccagcttcttctatgctcat 20197
>gb|AC151480.1| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNAa0068G15, complete sequence Length = 130161 Score = 291 bits (147), Expect = 1e-75 Identities = 198/215 (92%) Strand = Plus / Minus Query: 400 aactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaa 459 |||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct: 22199 aacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaa 22140 Query: 460 caagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacac 519 ||||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 22139 caagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacac 22080 Query: 520 ttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggtt 579 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 22079 ttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggtt 22020 Query: 580 tggaatatggtgcacggctggcagcattatggtgc 614 |||| |||||||||||| ||||||||||||||||| Sbjct: 22019 tggagtatggtgcacggttggcagcattatggtgc 21985 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 23161 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 23102 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 23101 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 23042 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 23041 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 22982 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcat 385 ||||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 22981 ctccatcattttcatctcacgtaagccagcttcttctatgctcat 22937
>gb|AC123527.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0068G15, complete sequence Length = 146175 Score = 291 bits (147), Expect = 1e-75 Identities = 198/215 (92%) Strand = Plus / Minus Query: 400 aactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaa 459 |||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct: 108373 aacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaa 108314 Query: 460 caagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacac 519 ||||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 108313 caagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacac 108254 Query: 520 ttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggtt 579 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 108253 ttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggtt 108194 Query: 580 tggaatatggtgcacggctggcagcattatggtgc 614 |||| |||||||||||| ||||||||||||||||| Sbjct: 108193 tggagtatggtgcacggttggcagcattatggtgc 108159 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 109335 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 109276 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 109275 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 109216 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 109215 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 109156 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcat 385 ||||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 109155 ctccatcattttcatctcacgtaagccagcttcttctatgctcat 109111
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 291 bits (147), Expect = 1e-75 Identities = 198/215 (92%) Strand = Plus / Minus Query: 400 aactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaa 459 |||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct: 1890543 aacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaa 1890484 Query: 460 caagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacac 519 ||||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 1890483 caagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacac 1890424 Query: 520 ttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggtt 579 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1890423 ttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggtt 1890364 Query: 580 tggaatatggtgcacggctggcagcattatggtgc 614 |||| |||||||||||| ||||||||||||||||| Sbjct: 1890363 tggagtatggtgcacggttggcagcattatggtgc 1890329 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 1891505 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 1891446 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 1891445 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 1891386 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 1891385 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 1891326 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcat 385 ||||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 1891325 ctccatcattttcatctcacgtaagccagcttcttctatgctcat 1891281 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 12987686 tgcagtgtcaatagctttta 12987667
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 291 bits (147), Expect = 1e-75 Identities = 198/215 (92%) Strand = Plus / Minus Query: 400 aactaggctgaaaaacttgtgctgccattctttccctctcactggtgagtcccccaccaa 459 |||| |||||||||||||||||||||||||| || || |||||||| ||||| ||||||| Sbjct: 1888264 aacttggctgaaaaacttgtgctgccattctctctctttcactggttagtcctccaccaa 1888205 Query: 460 caagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtgaaacac 519 ||||||||||||| ||||||||||| || ||||||||||| ||||| ||||||||||||| Sbjct: 1888204 caagacttgcagggccaaatatcagcggctggtgtttgtgctcatgtgcttgtgaaacac 1888145 Query: 520 ttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgattggagcagctggtt 579 ||||||| ||||||||||| ||||||||||| |||||||||||||||||| ||||||||| Sbjct: 1888144 ttgctctaccttcaatgacatcttgagcaaatgttgcacaagtgattggatcagctggtt 1888085 Query: 580 tggaatatggtgcacggctggcagcattatggtgc 614 |||| |||||||||||| ||||||||||||||||| Sbjct: 1888084 tggagtatggtgcacggttggcagcattatggtgc 1888050 Score = 168 bits (85), Expect = 1e-38 Identities = 190/225 (84%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 1889226 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 1889167 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 1889166 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 1889107 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 1889106 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 1889047 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcat 385 ||||||||||||||| ||| || ||| |||| ||| |||||||| Sbjct: 1889046 ctccatcattttcatctcacgtaagccagcttcttctatgctcat 1889002 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 13067865 tgcagtgtcaatagctttta 13067846
>emb|Z54153.1|OSCHINDPR O.sativa mRNA for chilling-inducible protein Length = 1585 Score = 216 bits (109), Expect = 6e-53 Identities = 241/285 (84%) Strand = Plus / Minus Query: 161 ttagccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtc 220 ||||||||| ||||| ||||||||||||||||| || || ||||| || ||||||||||| Sbjct: 1338 ttagccacagggagtgagcttcttgttgcctgcaccacgagggttatcgtccttccagtc 1279 Query: 221 atcccatgcccttgctttctcctcttctgcgtcctcgtcgtcctgcgccaaactagtgtc 280 ||||||| | || |||||||||||||| ||||||||||| || || || | | | || | Sbjct: 1278 atcccatcctctcgctttctcctcttcggcgtcctcgtcctcttgggctgaccgactgcc 1219 Query: 281 atccttgtgccaagaggagcttgcctcttgaatcatcttggcggtactttcttgccattg 340 |||||||||||| | |||| ||| ||||||||||||||||| || ||||||||||||| Sbjct: 1218 atccttgtgccatgcggagtttgattcttgaatcatcttggcagttctttcttgccattt 1159 Query: 341 ctccatcattttcatttcagctaggccggcttgttcgatgctcattgtcggcatcctgaa 400 ||||||||||||||| ||| || ||| |||| ||| |||||||| || |||| ||| | Sbjct: 1158 ctccatcattttcatctcacgtaagccagcttcttctatgctcatcgttggcaacctata 1099 Query: 401 actaggctgaaaaacttgtgctgccattctttccctctcactggt 445 ||| |||||||||||||||||||||||||| || || |||||||| Sbjct: 1098 acttggctgaaaaacttgtgctgccattctctctctttcactggt 1054 Score = 103 bits (52), Expect = 7e-19 Identities = 61/64 (95%) Strand = Plus / Minus Query: 551 agttgcacaagtgattggagcagctggtttggaatatggtgcacggctggcagcattatg 610 ||||||||||||||||||| ||||||||||||| |||||||||||| ||||||||||||| Sbjct: 1052 agttgcacaagtgattggatcagctggtttggagtatggtgcacggttggcagcattatg 993 Query: 611 gtgc 614 |||| Sbjct: 992 gtgc 989
>gb|AY775048.1| Nicotiana tabacum Avr9/Cf-9 rapidly elicited protein 271 (ACRE271) mRNA, partial cds Length = 783 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Minus Query: 455 accaacaagacttgcaggtccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 |||||||||||||||||||||||| || | ||||| |||| || ||||| || ||||| Sbjct: 529 accaacaagacttgcaggtccaaaaattaaaggttgatgttcatgttcatgtgcctgtga 470 Query: 515 aacacttgctctgccttcaatgacgtcttgagcaaaagttgcacaagtgat 565 ||| | || || ||||| ||||| ||||| |||||||| ||||| ||||| Sbjct: 469 aaccttggccctcccttctatgacatcttgtgcaaaagtggcacaggtgat 419
>emb|CR956619.7| M.truncatula DNA sequence from clone MTH2-65F22 on chromosome 3, complete sequence Length = 148409 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Plus Query: 474 ccaaatatcaggggttggtgtttgtggtcatgagcttgtga 514 ||||||||||| |||||||||||||| || || |||||||| Sbjct: 80462 ccaaatatcagtggttggtgtttgtgttcgtgtgcttgtga 80502
>emb|BX548034.14| Zebrafish DNA sequence from clone DKEY-106M16 in linkage group 1, complete sequence Length = 199490 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cagtgtcaatagcttttaaatt 162 |||||||||||||||||||||| Sbjct: 30589 cagtgtcaatagcttttaaatt 30610
>emb|AL974309.17| Zebrafish DNA sequence from clone DKEY-29D5 in linkage group 1, complete sequence Length = 214332 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 141 cagtgtcaatagcttttaaatt 162 |||||||||||||||||||||| Sbjct: 189899 cagtgtcaatagcttttaaatt 189920
>gb|AC079969.5| Homo sapiens chromosome 15, clone RP11-636P14, complete sequence Length = 227506 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 337 attgctccatcattttcatttc 358 |||||||||||||||||||||| Sbjct: 17953 attgctccatcattttcatttc 17974
>gb|AC058803.5| Homo sapiens chromosome 15, clone RP11-717I24, complete sequence Length = 203493 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 337 attgctccatcattttcatttc 358 |||||||||||||||||||||| Sbjct: 125491 attgctccatcattttcatttc 125470
>gb|AY261362.1| African swine fever virus isolate Mkuzi 1979, complete genome Length = 192714 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ggatattgatgaaatgatgcac 25 |||||||||||||||||||||| Sbjct: 28518 ggatattgatgaaatgatgcac 28497
>gb|AY261361.1| African swine fever virus isolate Malawi Lil-20/1 (1983), complete genome Length = 187612 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ggatattgatgaaatgatgcac 25 |||||||||||||||||||||| Sbjct: 25185 ggatattgatgaaatgatgcac 25164
>gb|U03762.1|ASU03762 African swine fever virus Malawi Lil-20/1 multigene family 360 and 300 proteins (LMW2AL, LMW2BL, LMW2DL, LMW2ER, LMW2HL, LMW3BL, LMW3CL, LMW3DL, LMW3EL, LMW3FR, LMW3HL, LMW3IL, LMW3LL, LMW3NR, LMW3QR) genes, complete cds Length = 20500 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 4 ggatattgatgaaatgatgcac 25 |||||||||||||||||||||| Sbjct: 11572 ggatattgatgaaatgatgcac 11551
>ref|NM_124679.1| Arabidopsis thaliana TAP46 (2A PHOSPHATASE ASSOCIATED PROTEIN OF 46 KD) AT5G53000 (TAP46) mRNA, complete cds Length = 1457 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1338 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1279 Query: 223 c 223 | Sbjct: 1278 c 1278
>gb|AC103624.9| Mus musculus chromosome 5, clone RP24-258B22, complete sequence Length = 172330 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 225 catgcccttgctttctcctcttctg 249 |||||| |||||||||||||||||| Sbjct: 5562 catgcctttgctttctcctcttctg 5586
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 gcctcttgaatcatcttggcggtac 327 |||||| |||||||||||||||||| Sbjct: 1854123 gcctctcgaatcatcttggcggtac 1854099
>ref|XM_461653.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G03014g) partial mRNA Length = 1167 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tcatccttccagtcatcccat 227 ||||||||||||||||||||| Sbjct: 1124 tcatccttccagtcatcccat 1104
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggagtaagcttcttgttgcct 191 ||||||||||||||||||||| Sbjct: 637224 ggagtaagcttcttgttgcct 637244
>ref|XM_566910.1| Cryptococcus neoformans var. neoformans JEC21 purine nucleotide biosynthesis-related protein (CNA06790) partial mRNA Length = 1918 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 303 gcctcttgaatcatcttggcggtac 327 |||||| |||||||||||||||||| Sbjct: 164 gcctctcgaatcatcttggcggtac 140
>gb|AC166100.2| Mus musculus BAC clone RP24-64H18 from chromosome 19, complete sequence Length = 275852 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 219 tcatcccatgcccttgctttctcctcttc 247 |||||||| |||||||||||||| ||||| Sbjct: 145295 tcatcccaagcccttgctttctcttcttc 145267
>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces hansenii Length = 2051428 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 207 tcatccttccagtcatcccat 227 ||||||||||||||||||||| Sbjct: 219320 tcatccttccagtcatcccat 219300
>gb|AC083797.16| Homo sapiens 3 BAC RP11-114A6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157113 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 436 tctcactggtgagtcccccac 456 ||||||||||||||||||||| Sbjct: 152479 tctcactggtgagtcccccac 152459
>gb|BT006150.1| Arabidopsis thaliana clone U20629 putative PP2A regulatory subunit (At5g53000) mRNA, complete cds Length = 1249 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1216 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1157 Query: 223 c 223 | Sbjct: 1156 c 1156
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggagtaagcttcttgttgcct 191 ||||||||||||||||||||| Sbjct: 637222 ggagtaagcttcttgttgcct 637242
>emb|BX831385.1|CNS09YV4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS85ZB08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1453 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1305 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1246 Query: 223 c 223 | Sbjct: 1245 c 1245
>gb|BT004072.1| Arabidopsis thaliana clone RAFL15-22-G20 (R20629) putative PP2A regulatory subunit (At5g53000) mRNA, complete cds Length = 1546 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1333 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1274 Query: 223 c 223 | Sbjct: 1273 c 1273
>gb|AY085863.1| Arabidopsis thaliana clone 19116 mRNA, complete sequence Length = 1457 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1338 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1279 Query: 223 c 223 | Sbjct: 1278 c 1278
>gb|AC121490.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0005F16, complete sequence Length = 160053 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggagtaagcttcttgttgcct 191 ||||||||||||||||||||| Sbjct: 23105 ggagtaagcttcttgttgcct 23125
>dbj|AB018116.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MNB8 Length = 46872 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Plus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 9137 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 9196 Query: 223 c 223 | Sbjct: 9197 c 9197
>dbj|AK067241.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096G22, full insert sequence Length = 2591 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 171 ggagtaagcttcttgttgcct 191 ||||||||||||||||||||| Sbjct: 228 ggagtaagcttcttgttgcct 248
>gb|AC104742.9| Mus musculus chromosome 5, clone RP24-334A12, complete sequence Length = 117378 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 225 catgcccttgctttctcctcttctg 249 |||||| |||||||||||||||||| Sbjct: 6083 catgcctttgctttctcctcttctg 6059
>gb|AF133708.1|AF133708 Arabidopsis thaliana PP2A regulatory subunit (TAP46) mRNA, complete cds Length = 1553 Score = 42.1 bits (21), Expect = 2.1 Identities = 51/61 (83%) Strand = Plus / Minus Query: 163 agccacatggagtaagcttcttgttgcctgcgccgcgtgggttttcatccttccagtcat 222 ||||||| || || || |||||||| ||||| ||||| || || ||||||||||| |||| Sbjct: 1332 agccacaaggtgtgagtttcttgttacctgcaccgcgaggattatcatccttccaatcat 1273 Query: 223 c 223 | Sbjct: 1272 c 1272
>gb|AC145327.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0095J10 map near S6115, complete sequence Length = 123717 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 59583 tgcagtgtcaatagctttta 59564
>gb|AC161262.2| Mus musculus BAC clone RP23-325G1 from chromosome 9, complete sequence Length = 204750 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 507 gcttgtgaaacacttgctctgcct 530 |||||| ||||||||||||||||| Sbjct: 86508 gcttgtcaaacacttgctctgcct 86531
>gb|U41548.2| Caenorhabditis elegans cosmid M02F4, complete sequence Length = 26835 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 341 ctccatcattttcatttcag 360 |||||||||||||||||||| Sbjct: 23224 ctccatcattttcatttcag 23205
>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome Length = 5237682 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1082640 aggggatattgatgaaatga 1082659
>gb|AC135567.3| Mus musculus BAC clone RP23-312I24 from chromosome 16, complete sequence Length = 208603 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cccttgctttctcctcttct 248 |||||||||||||||||||| Sbjct: 42524 cccttgctttctcctcttct 42505
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1053714 aggggatattgatgaaatga 1053733
>ref|XM_956555.1| Neurospora crassa OR74A hypothetical protein ( (AF294883) calcium-related spray protein [Neurospora crassa OR74A] ) (NCU01036.1) partial mRNA Length = 3435 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 2198 tcttctgcgtcctcgtcgtc 2217
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1053607 aggggatattgatgaaatga 1053626
>ref|XM_326528.1| Neurospora crassa OR74A hypothetical protein ( (AF294883) calcium-related spray protein [Neurospora crassa OR74A] ) (NCU01036.1) partial mRNA Length = 3435 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 2198 tcttctgcgtcctcgtcgtc 2217
>gb|AC138110.3| Mus musculus BAC clone RP24-363O16 from chromosome 1, complete sequence Length = 158654 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cttgctttctcctcttctgc 250 |||||||||||||||||||| Sbjct: 41363 cttgctttctcctcttctgc 41344
>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome Length = 185689 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 gatattgatgaaatgatgca 24 |||||||||||||||||||| Sbjct: 183665 gatattgatgaaatgatgca 183684
>gb|AY261360.1| African swine fever virus isolate Kenya 1950, complete genome Length = 193886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggatattgatgaaatgatgc 23 |||||||||||||||||||| Sbjct: 4306 ggatattgatgaaatgatgc 4287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 ggatattgatgaaatgatgc 23 |||||||||||||||||||| Sbjct: 3115 ggatattgatgaaatgatgc 3096
>gb|AC101822.24| Mus musculus chromosome 1, clone RP24-393F8, complete sequence Length = 125941 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cttgctttctcctcttctgc 250 |||||||||||||||||||| Sbjct: 103351 cttgctttctcctcttctgc 103332
>gb|AC093701.4| Homo sapiens BAC clone RP11-1252L15 from 7, complete sequence Length = 51166 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 151 agcttttaaattagccacatggag 174 |||||| ||||||||||||||||| Sbjct: 23908 agctttgaaattagccacatggag 23885
>gb|AC069279.6| Homo sapiens BAC clone CTD-2031I8 from 7, complete sequence Length = 103898 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 154 ttttaaattagccacatggagtaa 177 |||||||||||||||| ||||||| Sbjct: 1422 ttttaaattagccacagggagtaa 1399
>gb|AC133967.2| Mus musculus BAC clone RP23-14J5 from chromosome 16, complete sequence Length = 195446 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cccttgctttctcctcttct 248 |||||||||||||||||||| Sbjct: 109661 cccttgctttctcctcttct 109642
>gb|AC122935.3| Mus musculus BAC clone RP23-20E4 from chromosome 3, complete sequence Length = 191153 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 300 cttgcctcttgaatcatctt 319 |||||||||||||||||||| Sbjct: 13940 cttgcctcttgaatcatctt 13959
>gb|AC004125.1|HUAC004125 Homo sapiens Chromosome 16 BAC clone CIT987SK-625P11, complete sequence Length = 194020 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 tttcatccttccagtcatcccatg 228 ||||||||||||||| |||||||| Sbjct: 118981 tttcatccttccagtaatcccatg 119004
>gb|AC115291.7| Mus musculus BAC clone RP23-65P2 from 15, complete sequence Length = 237119 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 505 gagcttgtgaaacacttgct 524 |||||||||||||||||||| Sbjct: 52120 gagcttgtgaaacacttgct 52101
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1094427 aggggatattgatgaaatga 1094446
>emb|AL031672.13|HS691N24 Human DNA sequence from clone RP4-691N24 on chromosome 20p11.1-11.22 Contains the 3' part of the KIAA0980 gene, the 3' end of the gene for a novel protein (KIAA0186) and a CpG island, complete sequence Length = 100958 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 ctctcactggtgagtccccc 454 |||||||||||||||||||| Sbjct: 33266 ctctcactggtgagtccccc 33285
>emb|BX018608.1|CNS08MIS Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAA28BB04 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 433 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tcctcgtcgtcctgcgccaa 271 |||||||||||||||||||| Sbjct: 151 tcctcgtcgtcctgcgccaa 132
>gb|BT023753.1| Drosophila melanogaster RE63826 full insert cDNA Length = 2258 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 1313 cgtcctcgtcgtcctgcgcc 1294
>emb|BX294014.1|NCB11O8 Neurospora crassa DNA linkage group V BAC contig B11O8 Length = 93850 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 6211 tcttctgcgtcctcgtcgtc 6192
>emb|AL670006.1|NCG15G9 Neurospora crassa DNA linkage group V cosmid contig G15G9 Length = 92230 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 58792 tcttctgcgtcctcgtcgtc 58773
>emb|AL353817.1|NC1A9 Neurospora crassa DNA linkage group V Cosmid contig 1A9 Length = 57469 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 16216 tcttctgcgtcctcgtcgtc 16197
>gb|AC084053.6| Mus Musculus Strain C57BL6/J chromosome 3 BAC, RP23-158F1, complete sequence Length = 199415 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 cttgcctcttgaatcatctt 319 |||||||||||||||||||| Sbjct: 39143 cttgcctcttgaatcatctt 39124
>ref|NM_142831.2| Drosophila melanogaster CG4813-RA (CG4813), mRNA Length = 2017 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 1313 cgtcctcgtcgtcctgcgcc 1294
>gb|AC040172.5| Homo sapiens chromosome 16 clone RP11-60I4, complete sequence Length = 145003 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 508 cttgtgaaacacttgctctgcctt 531 ||||||||||||||||||| |||| Sbjct: 107901 cttgtgaaacacttgctcttcctt 107878
>gb|AY052004.1| Drosophila melanogaster LD46938 full length cDNA Length = 1518 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 795 cgtcctcgtcgtcctgcgcc 776
>gb|AC154448.2| Mus musculus BAC clone RP23-185F24 from chromosome 16, complete sequence Length = 203269 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 tatatgaacatcagctacat 125 |||||||||||||||||||| Sbjct: 173937 tatatgaacatcagctacat 173956
>dbj|AK087122.1| Mus musculus 0 day neonate lung cDNA, RIKEN full-length enriched library, clone:E030028L09 product:LIM domain containing preferred translocation partner in lipoma, full insert sequence Length = 2319 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cccttgctttctcctcttct 248 |||||||||||||||||||| Sbjct: 2155 cccttgctttctcctcttct 2174
>dbj|AK050035.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730005C19 product:similar to TYROSINE-PROTEIN KINASE JAK3 (EC 2.7.1.112) (JANUS KINASE 3) (JAK-3) [Mus musculus], full insert sequence Length = 3947 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cccttgctttctcctcttct 248 |||||||||||||||||||| Sbjct: 1538 cccttgctttctcctcttct 1557
>dbj|AK085876.1| Mus musculus 16 days neonate heart cDNA, RIKEN full-length enriched library, clone:D830021N23 product:unclassifiable, full insert sequence Length = 594 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cccttgctttctcctcttct 248 |||||||||||||||||||| Sbjct: 141 cccttgctttctcctcttct 160
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 15845312 tgcagtgtcaatagctttta 15845331
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 14853481 tgcagtgtcaatagctttta 14853500
>gb|AC009147.9| Homo sapiens chromosome 16 clone RP11-55H18, complete sequence Length = 163719 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 508 cttgtgaaacacttgctctgcctt 531 ||||||||||||||||||| |||| Sbjct: 62205 cttgtgaaacacttgctcttcctt 62228
>gb|AC008197.3|AC008197 Drosophila melanogaster, chromosome 3R, region 94B-94C, BAC clone BACR02L12, complete sequence Length = 178931 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 171010 cgtcctcgtcgtcctgcgcc 171029
>gb|AC009846.9|AC009846 Drosophila melanogaster, chromosome 3R, region 94C-94D, BAC clone BACR23F10, complete sequence Length = 164038 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 93073 cgtcctcgtcgtcctgcgcc 93092
>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence Length = 176299 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 tatatgaacatcagctacat 125 |||||||||||||||||||| Sbjct: 160863 tatatgaacatcagctacat 160844
>gb|AC103736.5| Homo sapiens chromosome 11, clone RP11-703E9, complete sequence Length = 147226 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 342 tccatcattttcatttcagc 361 |||||||||||||||||||| Sbjct: 127012 tccatcattttcatttcagc 126993
>dbj|BA000020.2| Nostoc sp. PCC 7120 plasmid pCC7120alpha DNA, complete genome Length = 408101 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 tatcaggggttggtgtttgt 498 |||||||||||||||||||| Sbjct: 221172 tatcaggggttggtgtttgt 221153
>ref|XM_215733.3| PREDICTED: Rattus norvegicus plakophilin 4 (predicted) (Pkp4_predicted), mRNA Length = 5211 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 417 tgtgctgccattctttccct 436 |||||||||||||||||||| Sbjct: 648 tgtgctgccattctttccct 667
>gb|AF294883.1|AF294883 Neurospora crassa calcium-related spray protein gene, complete cds Length = 5500 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 tcttctgcgtcctcgtcgtc 262 |||||||||||||||||||| Sbjct: 3684 tcttctgcgtcctcgtcgtc 3703
>gb|AC133208.3| Mus musculus BAC clone RP23-17O6 from chromosome unknown, complete sequence Length = 239189 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aacagaaatgttatatggtatatg 111 ||||||||||| |||||||||||| Sbjct: 162002 aacagaaatgtcatatggtatatg 161979
>dbj|AK194168.1| Mus musculus cDNA, clone:Y1G0114I02, strand:plus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000052097, based on BLAT search Length = 392 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 cttgctttctcctcttctgc 250 |||||||||||||||||||| Sbjct: 297 cttgctttctcctcttctgc 316
>dbj|AP004734.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0026P23 Length = 180188 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 58315 tgcagtgtcaatagctttta 58334
>dbj|AP005648.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0055I13 Length = 169486 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 tgcagtgtcaatagctttta 158 |||||||||||||||||||| Sbjct: 119284 tgcagtgtcaatagctttta 119303
>gb|AE003740.3| Drosophila melanogaster chromosome 3R, section 78 of 118 of the complete sequence Length = 234378 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 cgtcctcgtcgtcctgcgcc 269 |||||||||||||||||||| Sbjct: 79724 cgtcctcgtcgtcctgcgcc 79743
>emb|AL163612.5|CNS01RII Human chromosome 14 DNA sequence BAC R-346L24 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 171345 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 atggtatatgaacatcagct 121 |||||||||||||||||||| Sbjct: 163548 atggtatatgaacatcagct 163529
>emb|BX119956.8| Mouse DNA sequence from clone RP23-301K15 on chromosome X, complete sequence Length = 187028 Score = 40.1 bits (20), Expect = 8.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 88 aacagaaatgttatatggtatatg 111 ||||||||||| |||||||||||| Sbjct: 7694 aacagaaatgtcatatggtatatg 7671
>gb|AE016877.1| Bacillus cereus ATCC 14579, complete genome Length = 5411809 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1055048 aggggatattgatgaaatga 1055067
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 aggggatattgatgaaatga 20 |||||||||||||||||||| Sbjct: 1053714 aggggatattgatgaaatga 1053733
>dbj|AP007289.1| Lotus japonicus genomic DNA, clone:LjT33M01, TM0300b, complete sequence Length = 103374 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 atcattttcatttcagctag 364 |||||||||||||||||||| Sbjct: 43978 atcattttcatttcagctag 43997 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 345 atcattttcatttcagctag 364 |||||||||||||||||||| Sbjct: 38672 atcattttcatttcagctag 38691
>emb|AL929383.7| Mouse DNA sequence from clone RP23-303A7 on chromosome 4, complete sequence Length = 99059 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 ggtactttcttgccattgct 342 |||||||||||||||||||| Sbjct: 76462 ggtactttcttgccattgct 76443
>emb|AL929106.5| Mouse DNA sequence from clone RP23-446N16 on chromosome 2, complete sequence Length = 130872 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 86 ataacagaaatgttatatgg 105 |||||||||||||||||||| Sbjct: 84672 ataacagaaatgttatatgg 84691
>emb|AL672308.8| Mouse DNA sequence from clone RP23-459H14 on chromosome X, complete sequence Length = 178038 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 cttgctttctcctcttctgc 250 |||||||||||||||||||| Sbjct: 151330 cttgctttctcctcttctgc 151311
>emb|AL139099.3|CNS01DX7 Human chromosome 14 DNA sequence BAC R-649E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 157010 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 102 atggtatatgaacatcagct 121 |||||||||||||||||||| Sbjct: 155937 atggtatatgaacatcagct 155956
>gb|AC009677.21| Homo sapiens chromosome 15, clone RP11-54P21, complete sequence Length = 194529 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 84 aaataacagaaatgttatat 103 |||||||||||||||||||| Sbjct: 110438 aaataacagaaatgttatat 110419 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,167,255 Number of Sequences: 3902068 Number of extensions: 6167255 Number of successful extensions: 119168 Number of sequences better than 10.0: 99 Number of HSP's better than 10.0 without gapping: 101 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 118245 Number of HSP's gapped (non-prelim): 923 length of query: 614 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 591 effective length of database: 17,143,297,704 effective search space: 10131688943064 effective search space used: 10131688943064 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)