>NLAL1_ARATH (Q8VZT0) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein 1
          Length = 202

 Score = 92.4 bits (228), Expect = 3e-19
 Identities = 43/64 (67%), Positives = 49/64 (76%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKGSTPXXXXX 17
           K  EIFGPINES FS+KM EG++ATSY+ GDKFFIDP KLLPL+RFLPQPKG +      
Sbjct: 98  KVDEIFGPINESLFSIKMMEGIVATSYSPGDKFFIDPYKLLPLARFLPQPKGQSTGGRGG 157

Query: 16  GERG 5
             RG
Sbjct: 158 AGRG 161



 Score = 37.7 bits (86), Expect = 0.008
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           +FNAPIYL+NKTQIGKV     P    +F
Sbjct: 83  HFNAPIYLENKTQIGKVDEIFGPINESLF 111

>NLAL2_ARATH (Q9FK53) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein 2
          Length = 189

 Score = 88.6 bits (218), Expect = 4e-18
 Identities = 40/51 (78%), Positives = 46/51 (90%)
 Frame = -2

Query: 187 EIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKGST 35
           EIFGPINES FS+KM EG++ATSY++GDKFFI P KLLPLSRFLPQPKG +
Sbjct: 88  EIFGPINESLFSIKMREGIVATSYSQGDKFFISPEKLLPLSRFLPQPKGQS 138



 Score = 37.7 bits (86), Expect = 0.008
 Identities = 17/29 (58%), Positives = 20/29 (68%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           +FNAPIYLQNKTQIG+V     P    +F
Sbjct: 70  HFNAPIYLQNKTQIGRVDEIFGPINESLF 98

>NOLA1_BRARE (Q7ZVE0) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar|
           protein family A member 1)
          Length = 226

 Score = 64.3 bits (155), Expect(2) = 2e-15
 Identities = 29/52 (55%), Positives = 39/52 (75%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG + + YFSVK+ + + A+S+ +  KF+IDPMKLLPL RFLP+P G
Sbjct: 106 KVDEIFGQLRDFYFSVKLSDNMKASSFKKLQKFYIDPMKLLPLQRFLPRPPG 157



 Score = 35.4 bits (80), Expect(2) = 2e-15
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAP+YL+NK QIGKV
Sbjct: 91  YFNAPVYLENKEQIGKV 107

>NOLA1_RAT (Q6AYA1) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar|
           protein family A member 1)
          Length = 226

 Score = 63.2 bits (152), Expect(2) = 5e-15
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG + + YFSVK+ E + A+S+ +  KF+IDP KLLPL RFLP+P G
Sbjct: 114 KVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPG 165



 Score = 35.4 bits (80), Expect(2) = 5e-15
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAP+YL+NK QIGKV
Sbjct: 99  YFNAPVYLENKEQIGKV 115

>NOLA1_XENTR (Q5RJV1) H/ACA ribonucleoprotein complex subunit 1-like protein|
          Length = 218

 Score = 62.8 bits (151), Expect(2) = 5e-15
 Identities = 28/52 (53%), Positives = 38/52 (73%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG + + YFS+K+ E + A+S+ +  KF+IDP KLLPL RFLP+P G
Sbjct: 105 KVDEIFGQLRDFYFSIKLSENMKASSFKKLQKFYIDPAKLLPLQRFLPRPPG 156



 Score = 35.8 bits (81), Expect(2) = 5e-15
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAPIYL+NK QIGKV
Sbjct: 90  YFNAPIYLENKEQIGKV 106

>NOLA1_HUMAN (Q9NY12) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar|
           protein family A member 1) (snoRNP protein GAR1)
          Length = 217

 Score = 63.2 bits (152), Expect(2) = 5e-15
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG + + YFSVK+ E + A+S+ +  KF+IDP KLLPL RFLP+P G
Sbjct: 112 KVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPG 163



 Score = 35.4 bits (80), Expect(2) = 5e-15
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAP+YL+NK QIGKV
Sbjct: 97  YFNAPVYLENKEQIGKV 113

>NOLA1_MOUSE (Q9CY66) H/ACA ribonucleoprotein complex subunit 1 (Nucleolar|
           protein family A member 1) (snoRNP protein GAR1)
          Length = 231

 Score = 63.2 bits (152), Expect(2) = 6e-15
 Identities = 29/52 (55%), Positives = 38/52 (73%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG + + YFSVK+ E + A+S+ +  KF+IDP KLLPL RFLP+P G
Sbjct: 123 KVDEIFGQLRDFYFSVKLSENMKASSFKKLQKFYIDPYKLLPLQRFLPRPPG 174



 Score = 35.0 bits (79), Expect(2) = 6e-15
 Identities = 13/17 (76%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAP+YL+NK Q+GKV
Sbjct: 108 YFNAPVYLENKEQVGKV 124

>GAR1_CANGA (Q6FSB0) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 222

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 33/55 (60%), Positives = 42/55 (76%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKGSTP 32
           K  EI GP+NE YF++K  EGV ATS+ EGDKF+I P KLLP+ RF+P+PK + P
Sbjct: 78  KVDEILGPLNEVYFTIKCGEGVQATSFKEGDKFYIAPDKLLPIERFIPKPKVAGP 132



 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           YFNAPIYL+NKTQ+GKV   L P   + F
Sbjct: 63  YFNAPIYLENKTQVGKVDEILGPLNEVYF 91

>GAR1_ASHGO (Q757V8) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 212

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 30/55 (54%), Positives = 42/55 (76%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKGSTP 32
           K  EI GP+NE +F++K  EGV A+S+ +GDKF+I P KLLP+ RF+P+PK + P
Sbjct: 78  KVDEILGPLNEVFFTIKCAEGVKASSFKDGDKFYISPEKLLPIERFIPKPKVAGP 132



 Score = 37.4 bits (85), Expect = 0.010
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           YFNA IYL+NKT++GKV   L P   + F
Sbjct: 63  YFNAMIYLENKTEVGKVDEILGPLNEVFF 91

>NOLA1_CAEBR (Q61B10) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein
          Length = 246

 Score = 55.1 bits (131), Expect(2) = 4e-12
 Identities = 27/52 (51%), Positives = 35/52 (67%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG   E+ FSV + +GV A+S+  G + +IDP KLLP+ RFLPQ  G
Sbjct: 108 KIDEIFGSPGENGFSVTLSQGVKASSFKSGSELYIDPGKLLPVERFLPQVGG 159



 Score = 33.5 bits (75), Expect(2) = 4e-12
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAPIY +NK Q+GK+
Sbjct: 93  YFNAPIYFENKEQVGKI 109

>NOLA1_DROME (Q7KVQ0) H/ACA ribonucleoprotein complex subunit 1-like protein|
           (GCR 101 snRNP)
          Length = 237

 Score = 54.7 bits (130), Expect(2) = 6e-12
 Identities = 27/56 (48%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFL---PQPKGS 38
           K  EIFG + +   S+K+ + V A S+    K FIDP KLLP++RFL   PQPKG+
Sbjct: 109 KIDEIFGTVRDYSVSIKLSDNVYANSFKPNQKLFIDPGKLLPIARFLPKPPQPKGA 164



 Score = 33.5 bits (75), Expect(2) = 6e-12
 Identities = 12/17 (70%), Positives = 16/17 (94%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAPI+L+NK Q+GK+
Sbjct: 94  YFNAPIFLENKEQVGKI 110

>GAR1_YEAST (P28007) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 205

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 30/51 (58%), Positives = 39/51 (76%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPK 44
           K  EI GP+NE +F++K  +GV ATS+ EGDKF+I   KLLP+ RFLP+PK
Sbjct: 77  KVDEILGPLNEVFFTIKCGDGVQATSFKEGDKFYIAADKLLPIERFLPKPK 127



 Score = 42.0 bits (97), Expect = 4e-04
 Identities = 18/29 (62%), Positives = 21/29 (72%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           YFNAPIYL+NKTQ+GKV   L P   + F
Sbjct: 62  YFNAPIYLENKTQVGKVDEILGPLNEVFF 90

>NOLA1_CAEEL (Q9TYK1) Putative H/ACA ribonucleoprotein complex subunit 1-like|
           protein
          Length = 244

 Score = 52.0 bits (123), Expect(2) = 5e-11
 Identities = 26/52 (50%), Positives = 34/52 (65%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKG 41
           K  EIFG   E+ FSV + +GV A+S+    + +IDP KLLP+ RFLPQ  G
Sbjct: 100 KIDEIFGSPGENGFSVTLSQGVKASSFEPESQLYIDPGKLLPVDRFLPQAGG 151



 Score = 33.1 bits (74), Expect(2) = 5e-11
 Identities = 12/17 (70%), Positives = 15/17 (88%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKV 192
           YFNAPIY +NK Q+GK+
Sbjct: 85  YFNAPIYFKNKEQVGKI 101

>GAR1_SCHPO (Q06975) H/ACA ribonucleoprotein complex subunit 1 (snoRNP protein|
           GAR1)
          Length = 194

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 27/55 (49%), Positives = 40/55 (72%)
 Frame = -2

Query: 196 KXXEIFGPINESYFSVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLPQPKGSTP 32
           K  E+FGP+N+ YF+VK  EG++++S+  GDK ++   KL+PL RFLP+PK   P
Sbjct: 70  KIDEVFGPMNQVYFTVKPSEGIVSSSFKVGDKVYLSGDKLIPLDRFLPKPKTVGP 124



 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 242 YFNAPIYLQNKTQIGKVXRDLRPHQRIIF 156
           YFNAPIYL+NK+QIGK+     P  ++ F
Sbjct: 55  YFNAPIYLENKSQIGKIDEVFGPMNQVYF 83

>PRMA_DESPS (Q6AQF1) Ribosomal protein L11 methyltransferase (EC 2.1.1.-) (L11|
           Mtase)
          Length = 300

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = +3

Query: 120 DVAMTPSNILTEKYDSLMGPKISXXFADLGLVLEVYGRVK 239
           D+ +TP + L E+YD ++   I    A   +VLE+Y RVK
Sbjct: 216 DIGITPLSELREEYDLVVANIIHDVLA--SMVLELYSRVK 253

>PSD1_YEAST (P39006) Phosphatidylserine decarboxylase proenzyme 1,|
           mitochondrial precursor (EC 4.1.1.65) [Contains:
           Phosphatidylserine decarboxylase 1 beta chain;
           Phosphatidylserine decarboxylase 1 alpha chain]
          Length = 500

 Score = 28.9 bits (63), Expect = 3.7
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +1

Query: 160 MIR*WGRRSRXTLPIWVLFWRY 225
           M R WG+ +  TLPIWV  W Y
Sbjct: 137 MSRLWGQVNSLTLPIWVRPWGY 158

>ATS1_RAT (Q9WUQ1) ADAMTS-1 precursor (EC 3.4.24.-) (A disintegrin and|
           metalloproteinase with thrombospondin motifs 1) (ADAM-TS
           1) (ADAM-TS1)
          Length = 967

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = -2

Query: 154 SVKMFEGVIATSYNEGDKFFIDPMKLLPLSRFLP-QPK 44
           ++ + EGV    Y +G++FFI P   +   R +P +PK
Sbjct: 144 ALSLCEGVRGAFYLQGEEFFIQPAPAVATERLVPAEPK 181


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,201,444
Number of Sequences: 219361
Number of extensions: 406825
Number of successful extensions: 1033
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1033
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)