ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1YQI4_CAEEL (Q09505) Hypothetical protein C45G9.4 30 4.9
2YQI9_CAEEL (Q09507) Hypothetical protein C45G9.9 30 4.9

>YQI4_CAEEL (Q09505) Hypothetical protein C45G9.4|
          Length = 292

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 74  SHKWTQQLNVTTRCLTRSWITEQAVAVVEVNKLLHILRDCPNNV 205
           SHK+     V   C  R W+ E +V ++  + + H+LR   N +
Sbjct: 221 SHKFFMTQYVKDECRVRRWVYEDSVPLMMESNMKHMLRMASNRI 264



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>YQI9_CAEEL (Q09507) Hypothetical protein C45G9.9|
          Length = 294

 Score = 30.4 bits (67), Expect = 4.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 74  SHKWTQQLNVTTRCLTRSWITEQAVAVVEVNKLLHILRDCPNNV 205
           SHK+     V   C  R W+ E +V ++  + + H+LR   N +
Sbjct: 223 SHKFFMTQYVKDECRVRRWVYEDSVPLMMESNMKHMLRMASNRI 266


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,856,122
Number of Sequences: 219361
Number of extensions: 1929038
Number of successful extensions: 3877
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 3790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3877
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6314008338
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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