ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22f06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT018916.1| Zea mays clone EL01T0404G12.d mRNA sequence 278 2e-71
2ref|NM_185751.2| Oryza sativa (japonica cultivar-group), mRNA 252 1e-63
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
4dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic D... 252 1e-63
5dbj|AK109365.2| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
6dbj|AK073657.1| Oryza sativa (japonica cultivar-group) cDNA clon... 252 1e-63
7gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, comp... 44 0.58
8gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence 44 0.58
9gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete s... 44 0.58
10ref|NM_126275.2| Arabidopsis thaliana unknown protein AT2G02150 ... 42 2.3
11gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete g... 42 2.3
12gb|BC070583.1| Xenopus laevis hypothetical protein MGC81129, mRN... 42 2.3
13emb|CR956409.5| Pig DNA sequence from clone CH242-276G9 on chrom... 42 2.3
14gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map ... 42 2.3
15emb|CT009569.17| Pig DNA sequence from clone CH242-213C10 on chr... 42 2.3
16gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 40 9.0
17gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, comp... 40 9.0
18gb|AC108824.17| Mus musculus chromosome 7, clone RP23-81B14, com... 40 9.0
19gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosom... 40 9.0
20emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 i... 40 9.0
21gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, co... 40 9.0
22gb|AC102375.8| Mus musculus chromosome 3, clone RP23-281M6, comp... 40 9.0
23gb|AY198133.1| Spiroplasma kunkelii strain CR2-3x partial genome... 40 9.0
24emb|AL683812.12| Human DNA sequence from clone RP5-1014E24 on ch... 40 9.0
25emb|AL589763.6| Human DNA sequence from clone RP11-290P14 on chr... 40 9.0
26emb|AL589952.2| Human DNA sequence from clone RP11-122L16 on chr... 40 9.0
27emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chr... 40 9.0
28emb|AL356512.19| Human DNA sequence from clone RP11-156E8 on chr... 40 9.0
29emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chr... 40 9.0
30gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, co... 40 9.0
31gb|AY900001.1| J-virus, complete genome 40 9.0
32emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 40 9.0
33emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 40 9.0
34emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in... 40 9.0
35emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-8... 40 9.0
36gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, com... 40 9.0
37gb|AC004467.1|AC004467 Homo sapiens Xp22 BAC GSHB-512P14 (Genome... 40 9.0

>gb|BT018916.1| Zea mays clone EL01T0404G12.d mRNA sequence
          Length = 1782

 Score =  278 bits (140), Expect = 2e-71
 Identities = 233/264 (88%)
 Strand = Plus / Plus

                                                                       
Query: 393 accttagtgcattccaaatatatcatctggagggtcataaatatgcctctctgggaatag 452
           |||| ||||||| ||||| || || |||||||| ||||| |||||||| |||||||| | 
Sbjct: 361 acctcagtgcatgccaaaaatttcttctggaggatcatagatatgcctttctgggaacat 420

                                                                       
Query: 453 ctcttcaaaatcttgcttcactctgttccttaatagtggatgaggtaaaagacccttcaa 512
           ||||||||||||||| || ||||| || ||||  ||||| ||||||||||||||||||||
Sbjct: 421 ctcttcaaaatcttgttttactctatttcttagcagtgggtgaggtaaaagacccttcaa 480

                                                                       
Query: 513 taataccctgaaaggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaat 572
            |||||||| ||||| ||||| |||||||||||||||||  |||||||||||||||||||
Sbjct: 481 caataccctaaaaggtaactcttctggtggatcaggtgactttttcatgtcctcgtaaat 540

                                                                       
Query: 573 gttcattgcatctgatggggaaccatatctcaagaaccctcttatgacttcagcataagt 632
            |||||||||||||||||||| |||||||||||||| |||||||| ||||| ||||||||
Sbjct: 541 attcattgcatctgatggggagccatatctcaagaatcctcttattacttcggcataagt 600

                                   
Query: 633 ctgtgagtcgggaaacaggttctc 656
           ||||||||| ||| ||| ||||||
Sbjct: 601 ctgtgagtcaggagacaagttctc 624



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>ref|NM_185751.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1228

 Score =  252 bits (127), Expect = 1e-63
 Identities = 220/251 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 ccaaatatatcatctggagggtcataaatatgcctctctgggaatagctcttcaaaatct 465
           |||||||| || ||||| || ||||| |||||||| || || || |  ||||||||||||
Sbjct: 893 ccaaatatttcttctgggggatcatagatatgcctttccggaaacaattcttcaaaatct 834

                                                                       
Query: 466 tgcttcactctgttccttaatagtggatgaggtaaaagacccttcaataataccctgaaa 525
           |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 833 tgcttcactctgttccttaaaagtgggtgcggtaaaagacccttcaataataccctgaaa 774

                                                                       
Query: 526 ggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaatgttcattgcatct 585
           || || || || || |||||||||||  ||||||| ||||| |||||||||||||| |||
Sbjct: 773 ggtaattcttccggaggatcaggtgactttttcatttcctcataaatgttcattgcgtct 714

                                                                       
Query: 586 gatggggaaccatatctcaagaaccctcttatgacttcagcataagtctgtgagtcggga 645
           ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || 
Sbjct: 713 gatggggaaccgtatctcaagaatcctcttatgacttcagcatatgtctgtgcgtcaggg 654

                      
Query: 646 aacaggttctc 656
           || ||||||||
Sbjct: 653 aaaaggttctc 643



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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  252 bits (127), Expect = 1e-63
 Identities = 220/251 (87%)
 Strand = Plus / Plus

                                                                            
Query: 406      ccaaatatatcatctggagggtcataaatatgcctctctgggaatagctcttcaaaatct 465
                |||||||| || ||||| || ||||| |||||||| || || || |  ||||||||||||
Sbjct: 21749487 ccaaatatttcttctgggggatcatagatatgcctttccggaaacaattcttcaaaatct 21749546

                                                                            
Query: 466      tgcttcactctgttccttaatagtggatgaggtaaaagacccttcaataataccctgaaa 525
                |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 21749547 tgcttcactctgttccttaaaagtgggtgcggtaaaagacccttcaataataccctgaaa 21749606

                                                                            
Query: 526      ggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaatgttcattgcatct 585
                || || || || || |||||||||||  ||||||| ||||| |||||||||||||| |||
Sbjct: 21749607 ggtaattcttccggaggatcaggtgactttttcatttcctcataaatgttcattgcgtct 21749666

                                                                            
Query: 586      gatggggaaccatatctcaagaaccctcttatgacttcagcataagtctgtgagtcggga 645
                ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || 
Sbjct: 21749667 gatggggaaccgtatctcaagaatcctcttatgacttcagcatatgtctgtgcgtcaggg 21749726

                           
Query: 646      aacaggttctc 656
                || ||||||||
Sbjct: 21749727 aaaaggttctc 21749737



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 50/57 (87%), Gaps = 2/57 (3%)
 Strand = Plus / Plus

                                                                         
Query: 20       gttagggaaggaacagcatgaaaagtgagcagtgtactatttctaacaacctaatca 76
                ||||||||||||| |||||| || |||  |||||| ||| |||||||||||||||||
Sbjct: 21749066 gttagggaaggaatagcatg-aatgtggccagtgtccta-ttctaacaacctaatca 21749120



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>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0534A03
          Length = 153170

 Score =  252 bits (127), Expect = 1e-63
 Identities = 220/251 (87%)
 Strand = Plus / Plus

                                                                         
Query: 406   ccaaatatatcatctggagggtcataaatatgcctctctgggaatagctcttcaaaatct 465
             |||||||| || ||||| || ||||| |||||||| || || || |  ||||||||||||
Sbjct: 66670 ccaaatatttcttctgggggatcatagatatgcctttccggaaacaattcttcaaaatct 66729

                                                                         
Query: 466   tgcttcactctgttccttaatagtggatgaggtaaaagacccttcaataataccctgaaa 525
             |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 66730 tgcttcactctgttccttaaaagtgggtgcggtaaaagacccttcaataataccctgaaa 66789

                                                                         
Query: 526   ggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaatgttcattgcatct 585
             || || || || || |||||||||||  ||||||| ||||| |||||||||||||| |||
Sbjct: 66790 ggtaattcttccggaggatcaggtgactttttcatttcctcataaatgttcattgcgtct 66849

                                                                         
Query: 586   gatggggaaccatatctcaagaaccctcttatgacttcagcataagtctgtgagtcggga 645
             ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || 
Sbjct: 66850 gatggggaaccgtatctcaagaatcctcttatgacttcagcatatgtctgtgcgtcaggg 66909

                        
Query: 646   aacaggttctc 656
             || ||||||||
Sbjct: 66910 aaaaggttctc 66920



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 50/57 (87%), Gaps = 2/57 (3%)
 Strand = Plus / Plus

                                                                      
Query: 20    gttagggaaggaacagcatgaaaagtgagcagtgtactatttctaacaacctaatca 76
             ||||||||||||| |||||| || |||  |||||| ||| |||||||||||||||||
Sbjct: 66249 gttagggaaggaatagcatg-aatgtggccagtgtccta-ttctaacaacctaatca 66303



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>dbj|AK109365.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-H01, full
           insert sequence
          Length = 1224

 Score =  252 bits (127), Expect = 1e-63
 Identities = 220/251 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 ccaaatatatcatctggagggtcataaatatgcctctctgggaatagctcttcaaaatct 465
           |||||||| || ||||| || ||||| |||||||| || || || |  ||||||||||||
Sbjct: 889 ccaaatatttcttctgggggatcatagatatgcctttccggaaacaattcttcaaaatct 830

                                                                       
Query: 466 tgcttcactctgttccttaatagtggatgaggtaaaagacccttcaataataccctgaaa 525
           |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 829 tgcttcactctgttccttaaaagtgggtgcggtaaaagacccttcaataataccctgaaa 770

                                                                       
Query: 526 ggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaatgttcattgcatct 585
           || || || || || |||||||||||  ||||||| ||||| |||||||||||||| |||
Sbjct: 769 ggtaattcttccggaggatcaggtgactttttcatttcctcataaatgttcattgcgtct 710

                                                                       
Query: 586 gatggggaaccatatctcaagaaccctcttatgacttcagcataagtctgtgagtcggga 645
           ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || 
Sbjct: 709 gatggggaaccgtatctcaagaatcctcttatgacttcagcatatgtctgtgcgtcaggg 650

                      
Query: 646 aacaggttctc 656
           || ||||||||
Sbjct: 649 aaaaggttctc 639



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>dbj|AK073657.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051K19, full
           insert sequence
          Length = 1153

 Score =  252 bits (127), Expect = 1e-63
 Identities = 220/251 (87%)
 Strand = Plus / Minus

                                                                       
Query: 406 ccaaatatatcatctggagggtcataaatatgcctctctgggaatagctcttcaaaatct 465
           |||||||| || ||||| || ||||| |||||||| || || || |  ||||||||||||
Sbjct: 820 ccaaatatttcttctgggggatcatagatatgcctttccggaaacaattcttcaaaatct 761

                                                                       
Query: 466 tgcttcactctgttccttaatagtggatgaggtaaaagacccttcaataataccctgaaa 525
           |||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||||
Sbjct: 760 tgcttcactctgttccttaaaagtgggtgcggtaaaagacccttcaataataccctgaaa 701

                                                                       
Query: 526 ggcaactcctctggtggatcaggtgatcttttcatgtcctcgtaaatgttcattgcatct 585
           || || || || || |||||||||||  ||||||| ||||| |||||||||||||| |||
Sbjct: 700 ggtaattcttccggaggatcaggtgactttttcatttcctcataaatgttcattgcgtct 641

                                                                       
Query: 586 gatggggaaccatatctcaagaaccctcttatgacttcagcataagtctgtgagtcggga 645
           ||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||| || 
Sbjct: 640 gatggggaaccgtatctcaagaatcctcttatgacttcagcatatgtctgtgcgtcaggg 581

                      
Query: 646 aacaggttctc 656
           || ||||||||
Sbjct: 580 aaaaggttctc 570



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>gb|AC107754.9| Mus musculus chromosome 7, clone RP23-231J2, complete sequence
          Length = 171637

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 603  caagaaccctcttatgacttcagcat 628
            ||||||||||||||||||||| ||||
Sbjct: 6007 caagaaccctcttatgacttctgcat 6032



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>gb|AC107781.9| Mus musculus, clone RP23-56O1, complete sequence
          Length = 174437

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 603    caagaaccctcttatgacttcagcat 628
              ||||||||||||||||||||| ||||
Sbjct: 146317 caagaaccctcttatgacttctgcat 146342



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>gb|AC159538.20| Medicago truncatula clone mth2-48f16, complete sequence
          Length = 123581

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 33     cagcatgaaaagtgagcagtgt 54
              ||||||||||||||||||||||
Sbjct: 108362 cagcatgaaaagtgagcagtgt 108341



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>ref|NM_126275.2| Arabidopsis thaliana unknown protein AT2G02150 mRNA, complete cds
          Length = 3554

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 2    aagttggtttctaaagcagtt 22
            |||||||||||||||||||||
Sbjct: 1375 aagttggtttctaaagcagtt 1395



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>gb|CP000111.1| Prochlorococcus marinus str. MIT 9312, complete genome
          Length = 1709204

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 448     aatagctcttcaaaatcttgc 468
               |||||||||||||||||||||
Sbjct: 1554938 aatagctcttcaaaatcttgc 1554918



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>gb|BC070583.1| Xenopus laevis hypothetical protein MGC81129, mRNA (cDNA clone
           MGC:81129 IMAGE:6317517), complete cds
          Length = 1697

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 468 cttcactctgttccttaatag 488
           |||||||||||||||||||||
Sbjct: 543 cttcactctgttccttaatag 523



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>emb|CR956409.5| Pig DNA sequence from clone CH242-276G9 on chromosome 17, complete
             sequence
          Length = 129264

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 523   aaaggcaactcctctggtgga 543
             |||||||||||||||||||||
Sbjct: 73990 aaaggcaactcctctggtgga 73970



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>gb|AC005936.3| Arabidopsis thaliana chromosome 2 clone F5O4 map CIC11A04, complete
             sequence
          Length = 93212

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 2     aagttggtttctaaagcagtt 22
             |||||||||||||||||||||
Sbjct: 35404 aagttggtttctaaagcagtt 35424



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>emb|CT009569.17| Pig DNA sequence from clone CH242-213C10 on chromosome 17, complete
             sequence
          Length = 201723

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 270   cttctctgcatatcctctgac 290
             |||||||||||||||||||||
Sbjct: 86747 cttctctgcatatcctctgac 86767



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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 328     ccaagcaattggctgatctg 347
               ||||||||||||||||||||
Sbjct: 2500470 ccaagcaattggctgatctg 2500451



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>gb|AC102509.6| Mus musculus chromosome 7, clone RP24-327G7, complete sequence
          Length = 186990

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    gaatctttttgtttctccat 250
              ||||||||||||||||||||
Sbjct: 168115 gaatctttttgtttctccat 168096



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>gb|AC108824.17| Mus musculus chromosome 7, clone RP23-81B14, complete sequence
          Length = 182109

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 231    gaatctttttgtttctccat 250
              ||||||||||||||||||||
Sbjct: 107264 gaatctttttgtttctccat 107245



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  gaatctttttgtttctccat 250
            ||||||||||||||||||||
Sbjct: 7411 gaatctttttgtttctccat 7392



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>gb|AC144508.3| Mus musculus BAC clone RP24-152C23 from chromosome 15, complete
             sequence
          Length = 155524

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aataaattgcttcatatatt 183
             ||||||||||||||||||||
Sbjct: 20530 aataaattgcttcatatatt 20511



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>emb|BX322575.19| Zebrafish DNA sequence from clone CH211-283E2 in linkage group 9,
             complete sequence
          Length = 149874

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 378   gacataaacacttcaacctt 397
             ||||||||||||||||||||
Sbjct: 93046 gacataaacacttcaacctt 93065



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>gb|AC111048.8| Mus musculus chromosome 19, clone RP23-355N22, complete sequence
          Length = 232012

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 233   atctttttgtttctccatga 252
             ||||||||||||||||||||
Sbjct: 88906 atctttttgtttctccatga 88925



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>gb|AC102375.8| Mus musculus chromosome 3, clone RP23-281M6, complete sequence
          Length = 149467

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 19    agttagggaaggaacagcat 38
             ||||||||||||||||||||
Sbjct: 16558 agttagggaaggaacagcat 16539



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>gb|AY198133.1| Spiroplasma kunkelii strain CR2-3x partial genome sequence
          Length = 84712

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 159   aagtgaataaattgcttcatatattaag 186
             ||||||| |||||||| |||||||||||
Sbjct: 24749 aagtgaacaaattgctgcatatattaag 24776



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>emb|AL683812.12| Human DNA sequence from clone RP5-1014E24 on chromosome 1, complete
            sequence
          Length = 40731

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 14   aaagcagttagggaaggaacagca 37
            ||||||||| ||||||||||||||
Sbjct: 7477 aaagcagtttgggaaggaacagca 7454



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>emb|AL589763.6| Human DNA sequence from clone RP11-290P14 on chromosome 1 Contains
           the 3' end of the gene for a novel protein (FLJ33608),
           an aldo-keto reductase family 1 member B1 (aldose
           reductase) (AKR1B1) pseudogene, the 5' end of the gene
           for a novel protein and a CpG island, complete sequence
          Length = 166772

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 13  taaagcagttagggaaggaacagc 36
           |||||||||||||| |||||||||
Sbjct: 365 taaagcagttaggggaggaacagc 342



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>emb|AL589952.2| Human DNA sequence from clone RP11-122L16 on chromosome 6, complete
             sequence
          Length = 40893

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 164   aataaattgcttcatatatt 183
             ||||||||||||||||||||
Sbjct: 17562 aataaattgcttcatatatt 17543



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>emb|AL512601.18| Human DNA sequence from clone RP11-500B3 on chromosome 9 Contains the
             5' end of a novel gene, complete sequence
          Length = 165517

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   ctctgacaaattctgaattc 303
             ||||||||||||||||||||
Sbjct: 65685 ctctgacaaattctgaattc 65704



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>emb|AL356512.19| Human DNA sequence from clone RP11-156E8 on chromosome 1 Contains the
             5' end of the gene for a novel protein (FLJ33608) and a
             CpG island, complete sequence
          Length = 74029

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 13    taaagcagttagggaaggaacagc 36
             |||||||||||||| |||||||||
Sbjct: 72393 taaagcagttaggggaggaacagc 72370



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>emb|AL162497.20| Human DNA sequence from clone RP11-313L9 on chromosome 13 Contains a
             novel gene, the IRS2 gene for insulin receptor substrate 2
             and two CpG islands, complete sequence
          Length = 143409

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 626   cataagtctgtgagtcggga 645
             ||||||||||||||||||||
Sbjct: 78152 cataagtctgtgagtcggga 78171



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>gb|AC157785.2| Mus musculus chromosome 19, clone RP24-272L14, complete sequence
          Length = 159030

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 233    atctttttgtttctccatga 252
              ||||||||||||||||||||
Sbjct: 149088 atctttttgtttctccatga 149107



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>gb|AY900001.1| J-virus, complete genome
          Length = 18954

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 175   tcatatattaagagattgcc 194
             ||||||||||||||||||||
Sbjct: 12405 tcatatattaagagattgcc 12424



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>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 328   ccaagcaattggctgatctg 347
             ||||||||||||||||||||
Sbjct: 78356 ccaagcaattggctgatctg 78337



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>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14
          Length = 306050

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 328    ccaagcaattggctgatctg 347
              ||||||||||||||||||||
Sbjct: 277343 ccaagcaattggctgatctg 277324



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>emb|CR392365.8| Zebrafish DNA sequence from clone DKEY-171P17 in linkage group 5,
              complete sequence
          Length = 168716

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 285    tctgacaaattctgaattct 304
              ||||||||||||||||||||
Sbjct: 101475 tctgacaaattctgaattct 101494



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>emb|AL157789.6|CNS01RG6 Human chromosome 14 DNA sequence BAC R-880O3 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 225603

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 575   tcattgcatctgatggggaa 594
             ||||||||||||||||||||
Sbjct: 93133 tcattgcatctgatggggaa 93152



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>gb|AC102405.8| Mus musculus chromosome 3, clone RP24-318I21, complete sequence
          Length = 181425

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 19     agttagggaaggaacagcat 38
              ||||||||||||||||||||
Sbjct: 163997 agttagggaaggaacagcat 163978



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>gb|AC004467.1|AC004467 Homo sapiens Xp22 BAC GSHB-512P14 (Genome Systems Human BAC library)
             complete sequence
          Length = 73401

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 443   ctgggaatagctcttcaaaa 462
             ||||||||||||||||||||
Sbjct: 61609 ctgggaatagctcttcaaaa 61628


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,660,990
Number of Sequences: 3902068
Number of extensions: 6660990
Number of successful extensions: 116941
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116828
Number of HSP's gapped (non-prelim): 111
length of query: 659
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 636
effective length of database: 17,143,297,704
effective search space: 10903137339744
effective search space used: 10903137339744
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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