>ref|XM_463675.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 588

 Score =  192 bits (97), Expect = 5e-46
 Identities = 151/169 (89%)
 Strand = Plus / Minus

                                                                       
Query: 144 tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
           ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 588 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 529

                                                                       
Query: 204 gcttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccat 263
            ||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 528 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcaccttttcttccat 469

                                                            
Query: 264 gccagtggagtcactctttgcaaacgcctcggtccaatagcgagcagta 312
           ||| ||||||  | |||||||||| ||||| ||||| ||||||||||||
Sbjct: 468 gccggtggaggaattctttgcaaaggcctccgtccagtagcgagcagta 420

>dbj|AK073357.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033027F19, full
           insert sequence
          Length = 862

 Score =  192 bits (97), Expect = 5e-46
 Identities = 151/169 (89%)
 Strand = Plus / Minus

                                                                       
Query: 144 tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
           ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 679 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 620

                                                                       
Query: 204 gcttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccat 263
            ||||||||||| || || |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 619 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcaccttttcttccat 560

                                                            
Query: 264 gccagtggagtcactctttgcaaacgcctcggtccaatagcgagcagta 312
           ||| ||||||  | |||||||||| ||||| ||||| ||||||||||||
Sbjct: 559 gccggtggaggaattctttgcaaaggcctccgtccagtagcgagcagta 511

>gb|BT017297.1| Zea mays clone EL01N0315H07.c mRNA sequence
          Length = 879

 Score =  188 bits (95), Expect = 8e-45
 Identities = 146/163 (89%)
 Strand = Plus / Minus

                                                                       
Query: 146 agccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggcgc 205
           |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |
Sbjct: 671 agccagagcagagcttttcgagagccatgttctcgtcgccatccacgctcttcagggcac 612

                                                                       
Query: 206 ttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccatgc 265
           ||||||||  |||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 611 ttctcacctgatcctctgggaagcccatctcaaccagcttctgcaccttctcttccatgc 552

                                                      
Query: 266 cagtggagtcactctttgcaaacgcctcggtccaatagcgagc 308
           | || ||  ||||||| ||||| ||||| ||||| ||||||||
Sbjct: 551 ccgttgatgcactcttcgcaaaggcctctgtccagtagcgagc 509

>gb|AY110058.1| Zea mays CL9888_1 mRNA sequence
          Length = 1002

 Score =  168 bits (85), Expect = 8e-39
 Identities = 112/121 (92%)
 Strand = Plus / Plus

                                                                       
Query: 146 agccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggcgc 205
           |||||||||||||||| ||||||||||||||||||||||| | ||||||||||||||| |
Sbjct: 284 agccagagcagagcttttcgagagccatgttctcgtcgccatccacgctcttcagggcac 343

                                                                       
Query: 206 ttctcaccatatcctcggggaagcccatctccaccagcttctgcaccttttcttccatgc 265
           ||||||||  |||||| |||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 344 ttctcacctgatcctctgggaagcccatctcaaccagcttctgcaccttctcttccatgc 403

            
Query: 266 c 266
           |
Sbjct: 404 c 404

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                            
Query: 144      tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
                ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 40588611 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 40588670

                                                                  
Query: 204      gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 253
                 ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 40588671 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 40588720



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                            
Query: 250      accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 309
                ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 40588810 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 40588869

                   
Query: 310      gta 312
                |||
Sbjct: 40588870 gta 40588872

>dbj|AP004332.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OSJNBa0093F16
          Length = 160925

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 144   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
             ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 30589 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 30648

                                                               
Query: 204   gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 253
              ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 30649 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 30698



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 250   accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 309
             ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 30788 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 30847

                
Query: 310   gta 312
             |||
Sbjct: 30848 gta 30850

>dbj|AP003262.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0482D04
          Length = 144583

 Score =  131 bits (66), Expect = 2e-27
 Identities = 99/110 (90%)
 Strand = Plus / Plus

                                                                         
Query: 144   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
             ||||||||||||||||||||| |||||||||||||||||||| || || ||||||||  |
Sbjct: 68626 tcagccagagcagagcttctcaagagccatgttctcgtcgccattgacactcttcagaac 68685

                                                               
Query: 204   gcttctcaccatatcctcggggaagcccatctccaccagcttctgcacct 253
              ||||||||||| || || |||||||||||||| ||||||||||||||||
Sbjct: 68686 acttctcaccatgtcttcagggaagcccatctcaaccagcttctgcacct 68735



 Score = 69.9 bits (35), Expect = 5e-09
 Identities = 56/63 (88%)
 Strand = Plus / Plus

                                                                         
Query: 250   accttttcttccatgccagtggagtcactctttgcaaacgcctcggtccaatagcgagca 309
             ||||||||||||||||| ||||||  | |||||||||| ||||| ||||| |||||||||
Sbjct: 68825 accttttcttccatgccggtggaggaattctttgcaaaggcctccgtccagtagcgagca 68884

                
Query: 310   gta 312
             |||
Sbjct: 68885 gta 68887

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                            
Query: 144      tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
                |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 26423680 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 26423739

                                              
Query: 204      gcttctcaccatatcctcggggaagcccat 233
                 || ||||| || || || |||||||||||
Sbjct: 26423740 actcctcacgatgtcttcagggaagcccat 26423769

>dbj|AP003920.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1789_C07
          Length = 138944

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                         
Query: 144   tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
             |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 73232 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 73291

                                           
Query: 204   gcttctcaccatatcctcggggaagcccat 233
              || ||||| || || || |||||||||||
Sbjct: 73292 actcctcacgatgtcttcagggaagcccat 73321

>dbj|AP004015.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1770_H02
          Length = 170648

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                          
Query: 144    tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
              |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 153261 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 153320

                                            
Query: 204    gcttctcaccatatcctcggggaagcccat 233
               || ||||| || || || |||||||||||
Sbjct: 153321 actcctcacgatgtcttcagggaagcccat 153350

>dbj|AK064897.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000L10, full
            insert sequence
          Length = 2314

 Score = 52.0 bits (26), Expect = 0.001
 Identities = 74/90 (82%)
 Strand = Plus / Minus

                                                                        
Query: 144  tcagccagagcagagcttctcgagagccatgttctcgtcgccgttcacgctcttcagggc 203
            |||| ||||||||||||| || |||  |||||||||||||||||  ||  ||||||| ||
Sbjct: 2113 tcagacagagcagagcttttcaagaatcatgttctcgtcgccgtcgacaatcttcagagc 2054

                                          
Query: 204  gcttctcaccatatcctcggggaagcccat 233
             || ||||| || || || |||||||||||
Sbjct: 2053 actcctcacgatgtcttcagggaagcccat 2024

>ref|XM_508970.1| PREDICTED: Pan troglodytes similar to Ubiquitin carboxyl-terminal
            hydrolase 5 (Ubiquitin thiolesterase 5)
            (Ubiquitin-specific processing protease 5)
            (Deubiquitinating enzyme 5) (Isopeptidase T) (LOC451798),
            mRNA
          Length = 2825

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 223  gggaagcccatctccaccagct 244
            ||||||||||||||||||||||
Sbjct: 1760 gggaagcccatctccaccagct 1739

>ref|XM_543845.2| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 1 (LOC486718), mRNA
          Length = 3201

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 223  gggaagcccatctccaccagct 244
            ||||||||||||||||||||||
Sbjct: 2055 gggaagcccatctccaccagct 2034

>ref|XM_862321.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 4 (LOC486718), mRNA
          Length = 3045

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 223  gggaagcccatctccaccagct 244
            ||||||||||||||||||||||
Sbjct: 1899 gggaagcccatctccaccagct 1878

>ref|XM_862310.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
           transcript variant 3 (LOC486718), mRNA
          Length = 1856

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 223 gggaagcccatctccaccagct 244
           ||||||||||||||||||||||
Sbjct: 634 gggaagcccatctccaccagct 613

>ref|XM_862300.1| PREDICTED: Canis familiaris similar to Ubiquitin isopeptidase T,
            transcript variant 2 (LOC486718), mRNA
          Length = 3132

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 223  gggaagcccatctccaccagct 244
            ||||||||||||||||||||||
Sbjct: 1986 gggaagcccatctccaccagct 1965

>emb|CR861453.1| Pongo pygmaeus mRNA; cDNA DKFZp459D032 (from clone DKFZp459D032)
          Length = 3180

 Score = 44.1 bits (22), Expect = 0.30
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 223  gggaagcccatctccaccagct 244
            ||||||||||||||||||||||
Sbjct: 2039 gggaagcccatctccaccagct 2018

>ref|XM_875102.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 8 (LOC509356), mRNA
          Length = 1885

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_875017.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 7 (LOC509356), mRNA
          Length = 1987

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_874941.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 6 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_874861.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 5 (LOC509356), mRNA
          Length = 1966

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_874774.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 4 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_874692.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 3 (LOC509356), mRNA
          Length = 1969

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_874604.1| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 2 (LOC509356), mRNA
          Length = 2053

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_586296.2| PREDICTED: Bos taurus similar to zinc finger protein 71, transcript
           variant 1 (LOC509356), mRNA
          Length = 2902

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 136 caaggccttcagccagagca 155
           ||||||||||||||||||||
Sbjct: 500 caaggccttcagccagagca 519

>ref|XM_807938.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053507087.50) partial mRNA
          Length = 2850

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 314  taacaaaatgtggcctttgt 333
            ||||||||||||||||||||
Sbjct: 1910 taacaaaatgtggcctttgt 1929

>gb|AC104094.4| Homo sapiens BAC clone RP11-1383E23 from 7, complete sequence
          Length = 38437

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   caaggccttcagccagagcagagc 159
             |||| |||||||||||||||||||
Sbjct: 36023 caagaccttcagccagagcagagc 36046

>gb|AC125257.4| Homo sapiens chromosome , clone RP11-229E13, complete sequence
          Length = 159726

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 145   cagccagagcagagcttctc 164
             ||||||||||||||||||||
Sbjct: 48635 cagccagagcagagcttctc 48654

>emb|BX572101.1| Prochlorococcus marinus MIT9313 complete genome; segment 7/7
          Length = 318136

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   aagcccatctccaccagctt 245
             ||||||||||||||||||||
Sbjct: 34936 aagcccatctccaccagctt 34917

>gb|AC091172.11| Homo sapiens chromosome 17, clone RP11-156E6, complete sequence
          Length = 178345

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 145    cagccagagcagagcttctc 164
              ||||||||||||||||||||
Sbjct: 101181 cagccagagcagagcttctc 101200

>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D
             from chromosome 14 of Homo sapiens (Human), complete
             sequence
          Length = 226035

 Score = 40.1 bits (20), Expect = 4.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 138   aggccttcagccagagcaga 157
             ||||||||||||||||||||
Sbjct: 62518 aggccttcagccagagcaga 62499


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,431,290
Number of Sequences: 3902068
Number of extensions: 2431290
Number of successful extensions: 47138
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 47062
Number of HSP's gapped (non-prelim): 76
length of query: 355
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 333
effective length of database: 17,147,199,772
effective search space: 5710017524076
effective search space used: 5710017524076
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)