ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21p23
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
2dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
3ref|XM_512452.1| PREDICTED: Pan troglodytes similar to bromodoma... 42 2.1
4ref|NM_058243.1| Homo sapiens bromodomain containing 4 (BRD4), t... 42 2.1
5ref|NM_014299.1| Homo sapiens bromodomain containing 4 (BRD4), t... 42 2.1
6gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leu... 42 2.1
7gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leu... 42 2.1
8gb|AY714494.1| Oryza sativa (indica cultivar-group) clone OsInlk... 42 2.1
9gb|BC030158.2| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
10gb|BC047888.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
11gb|BC038988.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
12gb|BC000156.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
13emb|Y12059.1|HSHUNKI H.sapiens HUNKI mRNA 42 2.1
14gb|BC035266.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
15dbj|AB220448.1| Macaca fascicularis mRNA, clone QccE-20809: simi... 42 2.1
16gb|AF386649.1|AF386649 Homo sapiens bromodomain-containing 4 (BR... 42 2.1
17gb|AC004798.1|AC004798 Homo sapiens chromosome 19, cosmid R31546... 42 2.1
18gb|BC091649.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
19gb|AC011748.7| Homo sapiens BAC clone RP11-441M4 from 2, complet... 42 2.1
20gb|AY166680.1| Homo sapiens BRD4-NUT fusion oncoprotein (BRD4-NU... 42 2.1
21gb|BC067129.1| Homo sapiens bromodomain containing 4, mRNA (cDNA... 42 2.1
22gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 8.3
23gb|AF010237.1| Mus musculus interleukin-1 alpha gene, complete cds 40 8.3
24gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
25gb|AC148078.2| Mus musculus BAC clone RP24-186K12 from chromosom... 40 8.3
26gb|AY557820.1| Saccharomyces cerevisiae clone FLH002853.01X YGL1... 40 8.3
27ref|XM_569544.1| Cryptococcus neoformans var. neoformans JEC21 b... 40 8.3
28gb|AC069219.17| Homo sapiens 3 BAC RP11-376N7 (Roswell Park Canc... 40 8.3
29gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete seq... 40 8.3
30gb|AC148609.23| Medicago truncatula clone mth2-58e8, complete se... 40 8.3
31emb|CR846954.2| Takifugu rubripes DNA, highly conserved vertebra... 40 8.3
32emb|AL645568.9| Human DNA sequence from clone RP11-296O14 on chr... 40 8.3
33emb|AL365498.21| Human DNA sequence from clone RP11-319I23 on ch... 40 8.3
34emb|AL357080.13| Human DNA sequence from clone RP11-432L12 on ch... 40 8.3
35emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on ch... 40 8.3
36emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chro... 40 8.3
37emb|AL133382.8| Human DNA sequence from clone RP5-1156J9 on chro... 40 8.3
38emb|Z72688.1|SCYGL166W S.cerevisiae chromosome VII reading frame... 40 8.3
39emb|Z48618.1|SCCHVII35 S.cerevisiae genes for RAD54, ACE1(CUP2),... 40 8.3
40emb|CR392330.9| Zebrafish DNA sequence from clone CH211-282J17 i... 40 8.3
41gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Canc... 40 8.3
42gb|AC183492.1| Brassica oleracea Contig G, complete sequence 40 8.3
43emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in... 40 8.3
44gb|AC158319.1| Homo sapiens chromosome 3 clone WI2-1267B16, comp... 40 8.3
45dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
46dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
47dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
48gb|AC139451.7| Homo sapiens 3 BAC RP13-1056D16 (Roswell Park Can... 40 8.3
49gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome ... 40 8.3
50gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome... 40 8.3
51gb|AF294032.1|AF294032 Homo sapiens UBE1L protein (UBE1L) gene, ... 40 8.3
52gb|AC007738.2|AC007738 Homo sapiens BAC clone RP11-32P22 from 2,... 40 8.3
53gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete... 40 8.3
54dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
55dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
56emb|BX649599.7| Zebrafish DNA sequence from clone CH211-224B1 in... 40 8.3
57dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14,... 40 8.3
58dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
59gb|AC005385.3|AC005385 citb_10_k_1, complete sequence 40 8.3
60gb|AC102918.11| Mus musculus chromosome 7, clone RP24-273E13, co... 40 8.3
61gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.3
62emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb... 40 8.3
63emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa... 40 8.3
64emb|AL954358.5| Zebrafish DNA sequence from clone CH211-226D12, ... 40 8.3
65gb|M22580.1|YSCACEA Saccharomyces cerevisiae transcriptional act... 40 8.3
66emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chr... 40 8.3
67emb|AL669956.10| Mouse DNA sequence from clone RP23-222I1 on chr... 40 8.3
68gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, com... 40 8.3
69gb|M24390.1|YSCACE1A Saccharomyces cerevisiae activation protein... 40 8.3 
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                               
Query: 442     gaactgtcactgtctgaggagaaatatatgtg 473
               ||||||||||| ||||||||||||||||||||
Sbjct: 8764352 gaactgtcactatctgaggagaaatatatgtg 8764383



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     aatttctgcatctgaatcat 339
               ||||||||||||||||||||
Sbjct: 7917936 aatttctgcatctgaatcat 7917917
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>dbj|AP005382.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OJ1001_B06
          Length = 134810

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                             
Query: 442   gaactgtcactgtctgaggagaaatatatgtg 473
             ||||||||||| ||||||||||||||||||||
Sbjct: 34673 gaactgtcactatctgaggagaaatatatgtg 34704
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>ref|XM_512452.1| PREDICTED: Pan troglodytes similar to bromodomain-containing protein
            4 isoform long; chromosome-associated protein;
            bromodomain-containing 4 (LOC455794), mRNA
          Length = 4287

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 2530 catcagtcgaactgtcactgtccgaggag 2502
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>ref|NM_058243.1| Homo sapiens bromodomain containing 4 (BRD4), transcript variant
            long, mRNA
          Length = 5198

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1726 catcagtcgaactgtcactgtccgaggag 1698
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>ref|NM_014299.1| Homo sapiens bromodomain containing 4 (BRD4), transcript variant
            short, mRNA
          Length = 3149

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1726 catcagtcgaactgtcactgtccgaggag 1698
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>gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat
             receptor-like kinase gene cluster, complete sequence;
             ternary complex factor MIP1-like gene, complete cds;
             putative membrane-associated protein and gag-pol
             precursor, pseudogenes, complete sequence; and unknown
             genes
          Length = 94077

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 178   cctacacctgattctgatccg 198
             |||||||||||||||||||||
Sbjct: 27973 cctacacctgattctgatccg 27953
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>gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leucine-rich repeat
             receptor-like kinase genes, complete cds
          Length = 42445

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 178   cctacacctgattctgatccg 198
             |||||||||||||||||||||
Sbjct: 27444 cctacacctgattctgatccg 27424
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>gb|AY714494.1| Oryza sativa (indica cultivar-group) clone OsInlk6 putative
           leucine-rich repeat receptor-like kinase mRNA, complete
           cds
          Length = 3634

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 178 cctacacctgattctgatccg 198
           |||||||||||||||||||||
Sbjct: 151 cctacacctgattctgatccg 131
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>gb|BC030158.2| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:5086929), partial cds
          Length = 1734

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1593 catcagtcgaactgtcactgtccgaggag 1565
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>gb|BC047888.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:5496307), containing frame-shift errors
          Length = 1920

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1780 catcagtcgaactgtcactgtccgaggag 1752
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>gb|BC038988.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:5787152), containing frame-shift errors
          Length = 1911

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1767 catcagtcgaactgtcactgtccgaggag 1739
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>gb|BC000156.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:2900081), containing frame-shift errors
          Length = 1716

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1572 catcagtcgaactgtcactgtccgaggag 1544
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>emb|Y12059.1|HSHUNKI H.sapiens HUNKI mRNA
          Length = 3149

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1726 catcagtcgaactgtcactgtccgaggag 1698
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>gb|BC035266.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone MGC:42948
            IMAGE:4837491), complete cds
          Length = 3255

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1797 catcagtcgaactgtcactgtccgaggag 1769
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>dbj|AB220448.1| Macaca fascicularis mRNA, clone QccE-20809: similar to Homo sapiens
            bromodomain containing 4 (BRD4), transcript variant
            short, mRNA, NM_014299.1
          Length = 4259

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1352 catcagtcgaactgtcactgtccgaggag 1324
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>gb|AF386649.1|AF386649 Homo sapiens bromodomain-containing 4 (BRD4) mRNA, complete cds
          Length = 5198

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1726 catcagtcgaactgtcactgtccgaggag 1698
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>gb|AC004798.1|AC004798 Homo sapiens chromosome 19, cosmid R31546, complete sequence
          Length = 42497

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 434   catcagccgaactgtcactgtctgaggag 462
             |||||| ||||||||||||||| ||||||
Sbjct: 21947 catcagtcgaactgtcactgtccgaggag 21975
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>gb|BC091649.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:6650796), partial cds
          Length = 1910

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1764 catcagtcgaactgtcactgtccgaggag 1736
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>gb|AC011748.7| Homo sapiens BAC clone RP11-441M4 from 2, complete sequence
          Length = 127037

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 76    aattatttttctttccttgtc 96
             |||||||||||||||||||||
Sbjct: 58288 aattatttttctttccttgtc 58308
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>gb|AY166680.1| Homo sapiens BRD4-NUT fusion oncoprotein (BRD4-NUT fusion) mRNA,
            complete cds
          Length = 6004

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1726 catcagtcgaactgtcactgtccgaggag 1698
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>gb|BC067129.1| Homo sapiens bromodomain containing 4, mRNA (cDNA clone
            IMAGE:6138785), partial cds
          Length = 1888

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 434  catcagccgaactgtcactgtctgaggag 462
            |||||| ||||||||||||||| ||||||
Sbjct: 1748 catcagtcgaactgtcactgtccgaggag 1720
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>gb|AE017343.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 3, complete
              sequence
          Length = 2105742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 454    tctgaggagaaatatatgtg 473
              ||||||||||||||||||||
Sbjct: 718087 tctgaggagaaatatatgtg 718068
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>gb|AF010237.1| Mus musculus interleukin-1 alpha gene, complete cds
          Length = 13714

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 77   attatttttctttccttgtc 96
            ||||||||||||||||||||
Sbjct: 2021 attatttttctttccttgtc 2040
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>gb|AC079357.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0033D06,
             complete sequence
          Length = 142659

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aatttctgcatctgaatcat 339
             ||||||||||||||||||||
Sbjct: 99804 aatttctgcatctgaatcat 99785
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>gb|AC148078.2| Mus musculus BAC clone RP24-186K12 from chromosome 13, complete sequence
          Length = 149455

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 471    gtgttttgctgtggttgctt 490
              ||||||||||||||||||||
Sbjct: 103370 gtgttttgctgtggttgctt 103351
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>gb|AY557820.1| Saccharomyces cerevisiae clone FLH002853.01X YGL166W gene, complete
           cds
          Length = 678

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 tacttgtttgtatagctcgt 123
           ||||||||||||||||||||
Sbjct: 651 tacttgtttgtatagctcgt 632
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>ref|XM_569544.1| Cryptococcus neoformans var. neoformans JEC21 beta-glucosidase
           (CNC02510) partial mRNA
          Length = 2911

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 454 tctgaggagaaatatatgtg 473
           ||||||||||||||||||||
Sbjct: 486 tctgaggagaaatatatgtg 467
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>gb|AC069219.17| Homo sapiens 3 BAC RP11-376N7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 55474

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    aatactaattatttttctttcctt 93
             ||||||||||||| ||||||||||
Sbjct: 17310 aatactaattattattctttcctt 17333
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>gb|AC149306.9| Medicago truncatula clone mth2-88b8, complete sequence
          Length = 89880

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 69    caatactaattatttttctt 88
             ||||||||||||||||||||
Sbjct: 53539 caatactaattatttttctt 53520
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>gb|AC148609.23| Medicago truncatula clone mth2-58e8, complete sequence
          Length = 132218

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     caatactaattatttttctt 88
              ||||||||||||||||||||
Sbjct: 120134 caatactaattatttttctt 120153
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>emb|CR846954.2| Takifugu rubripes DNA, highly conserved vertebrate non-coding
           sequence, element ID CNE850
          Length = 217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 465 atatatgtgttttgctgtgg 484
           ||||||||||||||||||||
Sbjct: 105 atatatgtgttttgctgtgg 124
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>emb|AL645568.9| Human DNA sequence from clone RP11-296O14 on chromosome 1 Contains a
              pseudogene similar to part of ribosomal protein L26
              (RPL26), a novel pseudogene and a novel gene, complete
              sequence
          Length = 136031

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 76     aattatttttctttccttgt 95
              ||||||||||||||||||||
Sbjct: 119120 aattatttttctttccttgt 119101
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>emb|AL365498.21| Human DNA sequence from clone RP11-319I23 on chromosome 10 Contains
             three novel genes, complete sequence
          Length = 176508

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atatatgtgttttgctgtgg 484
             ||||||||||||||||||||
Sbjct: 44097 atatatgtgttttgctgtgg 44116
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>emb|AL357080.13| Human DNA sequence from clone RP11-432L12 on chromosome 6 Contains STSs
             and GSSs, complete sequence
          Length = 172073

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 20    caaaagtggagaataaatac 39
             ||||||||||||||||||||
Sbjct: 62045 caaaagtggagaataaatac 62026
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>emb|AL353788.33| Human DNA sequence from clone RP11-112K13 on chromosome Xq26.1-26.3,
             complete sequence
          Length = 162739

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 20    caaaagtggagaataaatac 39
             ||||||||||||||||||||
Sbjct: 28746 caaaagtggagaataaatac 28765
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>emb|AL157364.15| Human DNA sequence from clone RP11-31H2 on chromosome 13 Contians the
            ATP12A gene for ATPase, H+/K+ transporting, nongastric,
            alpha polypeptide, a ribosomal protein L26 (RPL26)
            pseudogene and a CpG island, complete sequence
          Length = 91231

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 320  aatttctgcatctgaatcat 339
            ||||||||||||||||||||
Sbjct: 5921 aatttctgcatctgaatcat 5940
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>emb|AL133382.8| Human DNA sequence from clone RP5-1156J9 on chromosome 1p12-13.2
             Contains part of the gene for a novel protein (FLJ37099)
             and a novel gene, complete sequence
          Length = 81419

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 402   aaacttttcctaccaactga 421
             ||||||||||||||||||||
Sbjct: 43666 aaacttttcctaccaactga 43685
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>emb|Z72688.1|SCYGL166W S.cerevisiae chromosome VII reading frame ORF YGL166w
          Length = 1509

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  tacttgtttgtatagctcgt 123
            ||||||||||||||||||||
Sbjct: 1311 tacttgtttgtatagctcgt 1292
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>emb|Z48618.1|SCCHVII35 S.cerevisiae genes for RAD54, ACE1(CUP2), PMR1, RCK1, AMS1, DNA
            helicase and tRNA-Leu
          Length = 35364

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 104  tacttgtttgtatagctcgt 123
            ||||||||||||||||||||
Sbjct: 1090 tacttgtttgtatagctcgt 1071
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>emb|CR392330.9| Zebrafish DNA sequence from clone CH211-282J17 in linkage group 20
             Contains eight genes for novel lectin C-type domain
             containing protein, complete sequence
          Length = 136773

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 535   tcatctccttgctcggatga 554
             ||||||||||||||||||||
Sbjct: 21906 tcatctccttgctcggatga 21887
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>gb|AC128710.2| Homo sapiens 3 BAC RP11-307C21 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 135514

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    aatactaattatttttctttcctt 93
             ||||||||||||| ||||||||||
Sbjct: 16283 aatactaattattattctttcctt 16306
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>gb|AC183492.1| Brassica oleracea Contig G, complete sequence
          Length = 236640

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 70    aatactaattatttttcttt 89
             ||||||||||||||||||||
Sbjct: 59404 aatactaattatttttcttt 59385
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>emb|BX842696.13| Zebrafish DNA sequence from clone DKEY-165P1 in linkage group 13,
              complete sequence
          Length = 216185

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    atatatgtgttttgctgtgg 484
              ||||||||||||||||||||
Sbjct: 199578 atatatgtgttttgctgtgg 199597
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>gb|AC158319.1| Homo sapiens chromosome 3 clone WI2-1267B16, complete sequence
          Length = 35497

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    aatactaattatttttctttcctt 93
             ||||||||||||| ||||||||||
Sbjct: 26585 aatactaattattattctttcctt 26562
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       atactaattatttttctttc 90
                ||||||||||||||||||||
Sbjct: 22572556 atactaattatttttctttc 22572575
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 320     aatttctgcatctgaatcat 339
               ||||||||||||||||||||
Sbjct: 1787075 aatttctgcatctgaatcat 1787056
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 369      tacagcgcccctgtcctcca 388
                ||||||||||||||||||||
Sbjct: 17300956 tacagcgcccctgtcctcca 17300937
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>gb|AC139451.7| Homo sapiens 3 BAC RP13-1056D16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 119043

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 66    tgccaatactaattatttttctttcctt 93
             ||||||||||  ||||||||||||||||
Sbjct: 52731 tgccaatactggttatttttctttcctt 52704
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>gb|AC154807.2| Mus musculus BAC clone RP23-79E7 from chromosome 16, complete sequence
          Length = 256130

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    cttcctacacctgattctga 194
              ||||||||||||||||||||
Sbjct: 235434 cttcctacacctgattctga 235415
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>gb|AC154804.2| Mus musculus BAC clone RP24-506H9 from chromosome 16, complete sequence
          Length = 176299

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 175   cttcctacacctgattctga 194
             ||||||||||||||||||||
Sbjct: 36965 cttcctacacctgattctga 36946
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>gb|AF294032.1|AF294032 Homo sapiens UBE1L protein (UBE1L) gene, complete cds
          Length = 12979

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 66   tgccaatactaattatttttctttcctt 93
            ||||||||||  ||||||||||||||||
Sbjct: 1764 tgccaatactggttatttttctttcctt 1737
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>gb|AC007738.2|AC007738 Homo sapiens BAC clone RP11-32P22 from 2, complete sequence
          Length = 183438

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 463   aaatatatgtgttttgctgt 482
             ||||||||||||||||||||
Sbjct: 64981 aaatatatgtgttttgctgt 64962
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>gb|AC009298.3| Homo sapiens BAC clone RP11-17I6 from 2, complete sequence
          Length = 165242

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 467    atatgtgttttgctgtggtt 486
              ||||||||||||||||||||
Sbjct: 123373 atatgtgttttgctgtggtt 123392
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>dbj|AP005518.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0046H10
          Length = 155544

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 320   aatttctgcatctgaatcat 339
             ||||||||||||||||||||
Sbjct: 25454 aatttctgcatctgaatcat 25435
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>dbj|AP005107.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0431E05
          Length = 146091

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 320    aatttctgcatctgaatcat 339
              ||||||||||||||||||||
Sbjct: 132318 aatttctgcatctgaatcat 132299
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>emb|BX649599.7| Zebrafish DNA sequence from clone CH211-224B1 in linkage group 18,
              complete sequence
          Length = 162087

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 206    atcctgaagcagcaggactg 225
              ||||||||||||||||||||
Sbjct: 151106 atcctgaagcagcaggactg 151087
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>dbj|BS000168.2| Pan troglodytes chromosome 22 clone:RP43-021P14, map 22, complete
             sequences
          Length = 184554

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 313   ccaagataatttctgcatct 332
             ||||||||||||||||||||
Sbjct: 60322 ccaagataatttctgcatct 60341
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>dbj|AP005317.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0579G08
          Length = 164452

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 369   tacagcgcccctgtcctcca 388
             ||||||||||||||||||||
Sbjct: 73639 tacagcgcccctgtcctcca 73620
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>gb|AC005385.3|AC005385 citb_10_k_1, complete sequence
          Length = 127203

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 465   atatatgtgttttgctgtgg 484
             ||||||||||||||||||||
Sbjct: 12037 atatatgtgttttgctgtgg 12056
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>gb|AC102918.11| Mus musculus chromosome 7, clone RP24-273E13, complete sequence
          Length = 128992

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 79    tatttttctttccttgtcct 98
             ||||||||||||||||||||
Sbjct: 51161 tatttttctttccttgtcct 51180
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 71       atactaattatttttctttc 90
                ||||||||||||||||||||
Sbjct: 22500901 atactaattatttttctttc 22500920
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>emb|AL954871.5|CNS08CDA Oryza sativa chromosome 12, . BAC OSJNBb0085B24 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131441

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    atactaattatttttctttc 90
             ||||||||||||||||||||
Sbjct: 75135 atactaattatttttctttc 75154
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>emb|AL845342.2|CNS08CB4 Oryza sativa chromosome 12, . BAC OSJNBa0027H05 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 138368

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    atactaattatttttctttc 90
             ||||||||||||||||||||
Sbjct: 17833 atactaattatttttctttc 17852
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>emb|AL954358.5| Zebrafish DNA sequence from clone CH211-226D12, complete sequence
          Length = 182858

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 465    atatatgtgttttgctgtgg 484
              ||||||||||||||||||||
Sbjct: 107624 atatatgtgttttgctgtgg 107605
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>gb|M22580.1|YSCACEA Saccharomyces cerevisiae transcriptional activator protein (ACE1)
           gene, complete cds, and two ORFs
          Length = 2730

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 tacttgtttgtatagctcgt 123
           ||||||||||||||||||||
Sbjct: 846 tacttgtttgtatagctcgt 827
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>emb|AL772347.6| Mouse DNA sequence from clone RP23-160G19 on chromosome 2, complete
              sequence
          Length = 184583

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 77     attatttttctttccttgtc 96
              ||||||||||||||||||||
Sbjct: 141872 attatttttctttccttgtc 141853
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>emb|AL669956.10| Mouse DNA sequence from clone RP23-222I1 on chromosome X, complete
              sequence
          Length = 199434

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 74     ctaattatttttctttcctt 93
              ||||||||||||||||||||
Sbjct: 180275 ctaattatttttctttcctt 180294
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>gb|AC102553.8| Mus musculus chromosome 19, clone RP23-159D6, complete sequence
          Length = 181534

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   atatatgtgttttgctgtgg 484
             ||||||||||||||||||||
Sbjct: 85591 atatatgtgttttgctgtgg 85572
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>gb|M24390.1|YSCACE1A Saccharomyces cerevisiae activation protein of CUP1 expression
           (ACE1) gene, complete cds
          Length = 1100

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 104 tacttgtttgtatagctcgt 123
           ||||||||||||||||||||
Sbjct: 845 tacttgtttgtatagctcgt 826


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,989,823
Number of Sequences: 3902068
Number of extensions: 5989823
Number of successful extensions: 123224
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 122910
Number of HSP's gapped (non-prelim): 314
length of query: 608
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 585
effective length of database: 17,143,297,704
effective search space: 10028829156840
effective search space used: 10028829156840
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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