ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21p17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF020716.1|AF020716 Triticum aestivum histidyl-tRNA synthetas... 1154 0.0
2gb|AF020717.1|AF020717 Triticum aestivum histidyl-tRNA synthetas... 1146 0.0
3ref|XM_493924.1| Oryza sativa (japonica cultivar-group), predic... 472 e-130
4emb|Z85984.1|OSHISRS O.sativa mRNA histidyl tRNA synthetase 472 e-130
5dbj|AK099789.1| Oryza sativa (japonica cultivar-group) cDNA clon... 472 e-130
6dbj|AK059520.1| Oryza sativa (japonica cultivar-group) cDNA clon... 472 e-130
7gb|AY105543.1| Zea mays PCO101093 mRNA sequence 297 3e-77
8gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome... 202 1e-48
9dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 202 1e-48
10emb|AJ720198.1| Gallus gallus mRNA for hypothetical protein, clo... 56 2e-04
11ref|NM_001006144.1| Gallus gallus histidyl-tRNA synthetase (HARS... 56 2e-04
12gb|AF378555.1|AF378555 Ophiostoma novo-ulmi clone 31 histidine-t... 48 0.043
13ref|NM_111144.2| Arabidopsis thaliana ATP binding / histidine-tR... 46 0.17
14ref|XM_387056.1| Gibberella zeae PH-1 chromosome 4 hypothetical ... 46 0.17
15gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC... 46 0.17
16gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10... 46 0.17
17ref|NM_208942.1| Eremothecium gossypii ACR187Wp (ACR187W), mRNA 46 0.17
18emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on ... 44 0.68
19emb|AL157838.24| Human DNA sequence from clone RP4-724E16 on chr... 44 0.68
20gb|AY119278.1| Drosophila melanogaster SD26982 full insert cDNA 44 0.68
21gb|AF312915.1|AF312915 Homo sapiens chromosome 20 clones 97 and ... 44 0.68
22gb|AC005375.4|AC005375 Homo sapiens chromosome 17, clone hRPK.38... 44 0.68
23gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome ... 42 2.7
24ref|XM_462062.1| Debaryomyces hansenii CBS767 hypothetical prote... 42 2.7
25ref|XM_949478.1| Theileria annulata strain Ankara histidyl-tRNA ... 42 2.7
26emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS... 42 2.7
27ref|NM_061043.2| Caenorhabditis elegans INSulin related family m... 42 2.7
28gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14... 42 2.7
29emb|Z82082.1|CEZC334 Caenorhabditis elegans Cosmid ZC334, comple... 42 2.7 
>gb|AF020716.1|AF020716 Triticum aestivum histidyl-tRNA synthetase mRNA, partial cds
          Length = 1633

 Score = 1154 bits (582), Expect = 0.0
 Identities = 721/768 (93%), Gaps = 3/768 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtattaaatcgaggagccgcactgtcttgtgtacacatctcagcaacagcaaaatggccg 60
            |||||||||| ||||||||||| ||| |||||||||||||||||| |||||||||||  |
Sbjct: 1568 gtattaaatcaaggagccgcaccgtcctgtgtacacatctcagcatcagcaaaatggatg 1509

                                                                        
Query: 61   cacagaaaaaccaagaaccacataccgcccagtactcacgcacacgctacatctttctaa 120
            ||||| |||||||| ||| |  || ||||||||   ||| |||   ||||||||||| ||
Sbjct: 1508 cacaggaaaaccaacaacgatgtatcgcccagt---cacacacgttctacatctttcaaa 1452

                                                                        
Query: 121  gatttaccttctaggggttagatagtctctgcttcagcacctcaacgaaatccttcctcg 180
            |||||    |||| |||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 1451 gatttcatctctaagggttagataatctctgcttcagcacctcaacgaaatctttccttg 1392

                                                                        
Query: 181  gaacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaact 240
            ||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||
Sbjct: 1391 gaacctcctcttcctggttagccctaatgtccttcagtttcaccttcccgtccctcaact 1332

                                                                        
Query: 241  cggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggt 300
            |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1331 cggactcgccgaccagcaccatccacgggatgcctgtctgcgtcgcatactttatgtggt 1272

                                                                        
Query: 301  tctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1271 tctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttca 1212

                                                                        
Query: 361  caagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcgg 420
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1211 caagctcggcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcgg 1152

                                                                        
Query: 421  tcgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactcttt 480
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1151 tcgcccggatcacctggttcttttccttttcctgttgctccatgattgcaaagactcttt 1092

                                                                        
Query: 481  ctattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagct 540
            ||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1091 ctattccaaagctgacgccaacagcagggacttgcttgttgctgaacatgcccacaagtt 1032

                                                                        
Query: 541  tgtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagctt 600
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1031 tgtcgtacctgccaccagcagcaatagagccaacctgtgtgacgcccttgaacacagctt 972

                                                                        
Query: 601  catatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcc 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971  catatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcc 912

                                                                        
Query: 661  tgtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaa 720
            |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 911  tgtcaagggcatttgctttttctagagctttgaataatatctccagctcatttaatgcaa 852

                                                            
Query: 721  caacagatccctcgttctncataaatttgctgncctnctttcgcaact 768
            ||||||| |||||||||| ||| || |||||| ||| |||||||||||
Sbjct: 851  caacagacccctcgttctccatgaacttgctgccctcctttcgcaact 804
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>gb|AF020717.1|AF020717 Triticum aestivum histidyl-tRNA synthetase mRNA, partial cds
          Length = 1436

 Score = 1146 bits (578), Expect = 0.0
 Identities = 720/768 (93%), Gaps = 3/768 (0%)
 Strand = Plus / Minus

                                                                        
Query: 1    gtattaaatcgaggagccgcactgtcttgtgtacacatctcagcaacagcaaaatggccg 60
            |||||||||| ||||||||||| |||||||||||||||||||||| |||||||||||  |
Sbjct: 1426 gtattaaatcaaggagccgcaccgtcttgtgtacacatctcagcatcagcaaaatggatg 1367

                                                                        
Query: 61   cacagaaaaaccaagaaccacataccgcccagtactcacgcacacgctacatctttctaa 120
            ||||  |||||||| ||| |  || ||||||||   ||| ||||  ||||||||||| ||
Sbjct: 1366 cacaagaaaaccaacaacgatgtatcgcccagt---cacacacattctacatctttcgaa 1310

                                                                        
Query: 121  gatttaccttctaggggttagatagtctctgcttcagcacctcaacgaaatccttcctcg 180
            |||||    |||| |||||||||| ||||||||||||||||||||||||||| ||||| |
Sbjct: 1309 gatttcatctctaagggttagataatctctgcttcagcacctcaacgaaatctttccttg 1250

                                                                        
Query: 181  gaacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaact 240
            ||||||||||||||||||||||| | ||||||||||| ||||||||||| ||||||||||
Sbjct: 1249 gaacctcctcttcctggttagccctaatgtccttcagtttcaccttcccgtccctcaact 1190

                                                                        
Query: 241  cggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggt 300
            |||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1189 cggactcgccgaccagcaccatccacgggatgcctgtctgcgtcgcatactttatgtggt 1130

                                                                        
Query: 301  tctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttca 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1129 tctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttca 1070

                                                                        
Query: 361  caagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcgg 420
            ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1069 caagctcggcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcgg 1010

                                                                        
Query: 421  tcgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactcttt 480
            | ||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 1009 tggcccggatcacctggttcttttctttctcctgttgctccatgatagcaaaaactcttt 950

                                                                        
Query: 481  ctattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagct 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 949  ctattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagct 890

                                                                        
Query: 541  tgtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagctt 600
            ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 889  tgtcgtacctgccaccagcagcaatagagccaacctgtgtgacgcccttgaacacagctt 830

                                                                        
Query: 601  catatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcc 660
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829  catatatcacaccagtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcc 770

                                                                        
Query: 661  tgtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaa 720
            ||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 769  tgtcaagggcattcgctttttctagagctttgaataatatctccagctcatttaatgcaa 710

                                                            
Query: 721  caacagatccctcgttctncataaatttgctgncctnctttcgcaact 768
            ||||||| |||||||||| ||| || |||||| ||| |||||||||||
Sbjct: 709  caacagacccctcgttctccatgaacttgctgccctcctttcgcaact 662
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>ref|XM_493924.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1485

 Score =  472 bits (238), Expect = e-130
 Identities = 487/570 (85%), Gaps = 3/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
            |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 1434 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 1375

                                                                        
Query: 242  ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
             ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 1374 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 1315

                                                                        
Query: 302  ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
            ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 1314 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 1255

                                                                        
Query: 362  aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
            |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 1254 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 1195

                                                                        
Query: 422  cgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactctttc 481
             ||||||||   ||| ||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 1194 ggcccggat---ctgattcttttccatctcctgttgctccatgattgcgaaaactctttc 1138

                                                                        
Query: 482  tattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagctt 541
            |||||||||||| || ||||| ||||||||||||||    || ||||| || ||||| ||
Sbjct: 1137 tattccaaggctaacaccaacggcagggacttgcttcccactaaacataccaacaaggtt 1078

                                                                        
Query: 542  gtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagcttc 601
            ||| |||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||
Sbjct: 1077 gtcatacctgcctccagcagcaatggagccaacctgagtggtgcccttgaacacagcttc 1018

                                                                        
Query: 602  atatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcct 661
            |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||| |
Sbjct: 1017 atatatcacaccagtgtagtaatcaaggcctctagcaaggcttaaatcaaaaacaatctt 958

                                                                        
Query: 662  gtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaac 721
            | | |  ||||||||||| |||||||||||||||| ||||| ||||||||||| ||||  
Sbjct: 957  gcctattgcatttgctttatctagagctttgaatagtatctccagctcatttagtgcagt 898

                                          
Query: 722  aacagatccctcgttctncataaatttgct 751
            |||||| ||  |||||  |||||| |||||
Sbjct: 897  aacagacccagcgttccccataaacttgct 868
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>emb|Z85984.1|OSHISRS O.sativa mRNA histidyl tRNA synthetase
          Length = 1723

 Score =  472 bits (238), Expect = e-130
 Identities = 487/570 (85%), Gaps = 3/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
            |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 1503 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 1444

                                                                        
Query: 242  ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
             ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 1443 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 1384

                                                                        
Query: 302  ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
            ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 1383 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 1324

                                                                        
Query: 362  aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
            |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 1323 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 1264

                                                                        
Query: 422  cgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactctttc 481
             ||||||||   ||| ||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 1263 ggcccggat---ctgattcttttccatctcctgttgctccatgattgcgaaaactctttc 1207

                                                                        
Query: 482  tattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagctt 541
            |||||||||||| || ||||| ||||||||||||||    || ||||| || ||||| ||
Sbjct: 1206 tattccaaggctaacaccaacggcagggacttgcttcccactaaacataccaacaaggtt 1147

                                                                        
Query: 542  gtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagcttc 601
            ||| |||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||
Sbjct: 1146 gtcatacctgcctccagcagcaatggagccaacctgagtggtgcccttgaacacagcttc 1087

                                                                        
Query: 602  atatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcct 661
            |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||| |
Sbjct: 1086 atatatcacaccagtgtagtaatcaaggcctctagcaaggcttaaatcaaaaacaatctt 1027

                                                                        
Query: 662  gtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaac 721
            | | |  ||||||||||| |||||||||||||||| ||||| ||||||||||| ||||  
Sbjct: 1026 gcctattgcatttgctttatctagagctttgaatagtatctccagctcatttagtgcagt 967

                                          
Query: 722  aacagatccctcgttctncataaatttgct 751
            |||||| ||  |||||  |||||| |||||
Sbjct: 966  aacagacccagcgttccccataaacttgct 937
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>dbj|AK099789.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013097A18, full
            insert sequence
          Length = 2644

 Score =  472 bits (238), Expect = e-130
 Identities = 487/570 (85%), Gaps = 3/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
            |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 2393 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 2334

                                                                        
Query: 242  ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
             ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 2333 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 2274

                                                                        
Query: 302  ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
            ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 2273 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 2214

                                                                        
Query: 362  aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
            |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 2213 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 2154

                                                                        
Query: 422  cgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactctttc 481
             ||||||||   ||| ||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 2153 ggcccggat---ctgattcttttccatctcctgttgctccatgattgcgaaaactctttc 2097

                                                                        
Query: 482  tattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagctt 541
            |||||||||||| || ||||| ||||||||||||||    || ||||| || ||||| ||
Sbjct: 2096 tattccaaggctaacaccaacggcagggacttgcttcccactaaacataccaacaaggtt 2037

                                                                        
Query: 542  gtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagcttc 601
            ||| |||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||
Sbjct: 2036 gtcatacctgcctccagcagcaatggagccaacctgagtggtgcccttgaacacagcttc 1977

                                                                        
Query: 602  atatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcct 661
            |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||| |
Sbjct: 1976 atatatcacaccagtgtagtaatcaaggcctctagcaaggcttaaatcaaaaacaatctt 1917

                                                                        
Query: 662  gtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaac 721
            | | |  ||||||||||| |||||||||||||||| ||||| ||||||||||| ||||  
Sbjct: 1916 gcctattgcatttgctttatctagagctttgaatagtatctccagctcatttagtgcagt 1857

                                          
Query: 722  aacagatccctcgttctncataaatttgct 751
            |||||| ||  |||||  |||||| |||||
Sbjct: 1856 aacagacccagcgttccccataaacttgct 1827
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>dbj|AK059520.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-029-C05, full
            insert sequence
          Length = 2028

 Score =  472 bits (238), Expect = e-130
 Identities = 487/570 (85%), Gaps = 3/570 (0%)
 Strand = Plus / Minus

                                                                        
Query: 182  aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
            |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 1763 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 1704

                                                                        
Query: 242  ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
             ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 1703 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 1644

                                                                        
Query: 302  ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
            ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 1643 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 1584

                                                                        
Query: 362  aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
            |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 1583 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 1524

                                                                        
Query: 422  cgcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactctttc 481
             ||||||||   ||| ||||||||| |||||||||||||||||||||| || ||||||||
Sbjct: 1523 ggcccggat---ctgattcttttccatctcctgttgctccatgattgcgaaaactctttc 1467

                                                                        
Query: 482  tattccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagctt 541
            |||||||||||| || ||||| ||||||||||||||    || ||||| || ||||| ||
Sbjct: 1466 tattccaaggctaacaccaacggcagggacttgcttcccactaaacataccaacaaggtt 1407

                                                                        
Query: 542  gtcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagcttc 601
            ||| |||||||| ||||||||||| ||||||||||| |||   |||||||||||||||||
Sbjct: 1406 gtcatacctgcctccagcagcaatggagccaacctgagtggtgcccttgaacacagcttc 1347

                                                                        
Query: 602  atatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcct 661
            |||||||||||| |||||||||||||||||||||||||||||||||||||||   ||| |
Sbjct: 1346 atatatcacaccagtgtagtaatcaaggcctctagcaaggcttaaatcaaaaacaatctt 1287

                                                                        
Query: 662  gtcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaac 721
            | | |  ||||||||||| |||||||||||||||| ||||| ||||||||||| ||||  
Sbjct: 1286 gcctattgcatttgctttatctagagctttgaatagtatctccagctcatttagtgcagt 1227

                                          
Query: 722  aacagatccctcgttctncataaatttgct 751
            |||||| ||  |||||  |||||| |||||
Sbjct: 1226 aacagacccagcgttccccataaacttgct 1197
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>gb|AY105543.1| Zea mays PCO101093 mRNA sequence
          Length = 2424

 Score =  297 bits (150), Expect = 3e-77
 Identities = 431/526 (81%)
 Strand = Plus / Minus

                                                                        
Query: 243  gactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggttc 302
            ||||||||||| |||||||||||||| ||||  |  |||   || ||||| |||||||||
Sbjct: 2016 gactcgccgactagcaccatccacggaatgcttgattgcaaggcatacttgatgtggttc 1957

                                                                        
Query: 303  tgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcaca 362
              ||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||| 
Sbjct: 1956 gccaccctggtagtgagcttgaactctgcctttatcccagcattccacagctcgctcacg 1897

                                                                        
Query: 363  agctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggtc 422
            ||||| || || |   | |||||||| |||||||| |||||||  ||||| ||||| || 
Sbjct: 1896 agctcggcagctagggtaaggtcctttcccagaattgacaccagcacctctgtctctgta 1837

                                                                        
Query: 423  gcccggatcacctggttcttttccttctcctgttgctccatgattgcaaagactctttct 482
            | |||||||  ||  ||  |||| |||||||| ||||||||||||||||||||||| || 
Sbjct: 1836 ggccggatcttctcatttctttctttctcctgctgctccatgattgcaaagactctctca 1777

                                                                        
Query: 483  attccaaggctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagcttg 542
            ||||||||||| || ||||||||||||| ||||||    || ||||| || ||||| |||
Sbjct: 1776 attccaaggctcacaccaacagcagggatttgcttcccactaaacatacccacaaggttg 1717

                                                                        
Query: 543  tcgtacctgccaccagcagcaatagagccaacctgtgtgactcccttgaacacagcttca 602
            |||||||  |||||||| || || ||||||||||| |   | |||||||| || ||||||
Sbjct: 1716 tcgtaccgaccaccagccgctatggagccaacctgagctgcacccttgaaaacggcttca 1657

                                                                        
Query: 603  tatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaaacttatcctg 662
            ||||| ||||| ||||||||||||||||| || || |  |||||||||||| ||||| ||
Sbjct: 1656 tatatgacaccagtgtagtaatcaaggcccctggccaaacttaaatcaaaagttatcttg 1597

                                                                        
Query: 663  tcaagggcatttgctttttctagagctttgaataatatctncagctcatttaatgcaaca 722
               |  ||||||||||| || ||||||||||||||||||| ||||||||| | |||| ||
Sbjct: 1596 cttattgcatttgctttatccagagctttgaataatatctccagctcattcagtgcagca 1537

                                                          
Query: 723  acagatccctcgttctncataaatttgctgncctnctttcgcaact 768
            ||||| ||  | || | |||||| |||||| ||| ||||| |||||
Sbjct: 1536 acagaccctacattattcataaacttgctgccctcctttctcaact 1491
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>gb|AC084218.6| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0001A07,
             complete sequence
          Length = 164898

 Score =  202 bits (102), Expect = 1e-48
 Identities = 213/250 (85%)
 Strand = Plus / Plus

                                                                         
Query: 182   aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
             |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 62615 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 62674

                                                                         
Query: 242   ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
              ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 62675 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 62734

                                                                         
Query: 302   ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
             ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 62735 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 62794

                                                                         
Query: 362   aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
             |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 62795 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 62854

                       
Query: 422   cgcccggatc 431
              |||||||||
Sbjct: 62855 ggcccggatc 62864



 Score =  168 bits (85), Expect = 2e-38
 Identities = 146/167 (87%)
 Strand = Plus / Plus

                                                                         
Query: 585   cccttgaacacagcttcatatatcacacctgtgtagtaatcaaggcctctagcaaggctt 644
             ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 63429 cccttgaacacagcttcatatatcacaccagtgtagtaatcaaggcctctagcaaggctt 63488

                                                                         
Query: 645   aaatcaaaacttatcctgtcaagggcatttgctttttctagagctttgaataatatctnc 704
             |||||||||   ||| || | |  ||||||||||| |||||||||||||||| ||||| |
Sbjct: 63489 aaatcaaaaacaatcttgcctattgcatttgctttatctagagctttgaatagtatctcc 63548

                                                            
Query: 705   agctcatttaatgcaacaacagatccctcgttctncataaatttgct 751
             |||||||||| ||||  |||||| ||  |||||  |||||| |||||
Sbjct: 63549 agctcatttagtgcagtaacagacccagcgttccccataaacttgct 63595



 Score =  149 bits (75), Expect = 2e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                         
Query: 432   acctggttcttttccttctcctgttgctccatgattgcaaagactctttctattccaagg 491
             ||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 62938 acctgattcttttccatctcctgttgctccatgattgcgaaaactctttctattccaagg 62997

                                                                         
Query: 492   ctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagcttgtcgtacctg 551
             || || ||||| ||||||||||||||    || ||||| || ||||| ||||| ||||||
Sbjct: 62998 ctaacaccaacggcagggacttgcttcccactaaacataccaacaaggttgtcatacctg 63057

                                        
Query: 552   ccaccagcagcaatagagccaacctgt 578
             || ||||||||||| ||||||||||||
Sbjct: 63058 cctccagcagcaatggagccaacctgt 63084
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  202 bits (102), Expect = 1e-48
 Identities = 213/250 (85%)
 Strand = Plus / Plus

                                                                           
Query: 182     aacctcctcttcctggttagccgtgatgtccttcagcttcaccttcccatccctcaactc 241
               |||||||||||||||| | || |  | || ||||||||||||||| |||   || |  ||
Sbjct: 2868004 aacctcctcttcctggctggctgccaagttcttcagcttcacctttccactgcttatttc 2868063

                                                                           
Query: 242     ggactcgccgaccagcaccatccacgggatgcccgtctgcgtcgcgtactttatgtggtt 301
                ||||| || ||||||||||||||||| ||||| |  |||||||||||||| | ||||||
Sbjct: 2868064 agactcaccaaccagcaccatccacggaatgccagattgcgtcgcgtacttcaagtggtt 2868123

                                                                           
Query: 302     ctgcaccctggtggtgagcttgaactctgcctttatcccagcactccacagctcgttcac 361
               ||| | ||| || ||||| |||||||||||||||||||||||| ||||||| ||  | ||
Sbjct: 2868124 ctgtatcctagtagtgagtttgaactctgcctttatcccagcattccacagttcactaac 2868183

                                                                           
Query: 362     aagctcagcggccaatatgaggtccttgcccagaatcgacaccaaaacctccgtctcggt 421
               |||||||||||||||||||||||||||||| | |||||||||||| ||||||||||||||
Sbjct: 2868184 aagctcagcggccaatatgaggtccttgccgataatcgacaccaatacctccgtctcggt 2868243

                         
Query: 422     cgcccggatc 431
                |||||||||
Sbjct: 2868244 ggcccggatc 2868253



 Score =  168 bits (85), Expect = 2e-38
 Identities = 146/167 (87%)
 Strand = Plus / Plus

                                                                           
Query: 585     cccttgaacacagcttcatatatcacacctgtgtagtaatcaaggcctctagcaaggctt 644
               ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2868818 cccttgaacacagcttcatatatcacaccagtgtagtaatcaaggcctctagcaaggctt 2868877

                                                                           
Query: 645     aaatcaaaacttatcctgtcaagggcatttgctttttctagagctttgaataatatctnc 704
               |||||||||   ||| || | |  ||||||||||| |||||||||||||||| ||||| |
Sbjct: 2868878 aaatcaaaaacaatcttgcctattgcatttgctttatctagagctttgaatagtatctcc 2868937

                                                              
Query: 705     agctcatttaatgcaacaacagatccctcgttctncataaatttgct 751
               |||||||||| ||||  |||||| ||  |||||  |||||| |||||
Sbjct: 2868938 agctcatttagtgcagtaacagacccagcgttccccataaacttgct 2868984



 Score =  149 bits (75), Expect = 2e-32
 Identities = 129/147 (87%)
 Strand = Plus / Plus

                                                                           
Query: 432     acctggttcttttccttctcctgttgctccatgattgcaaagactctttctattccaagg 491
               ||||| ||||||||| |||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 2868327 acctgattcttttccatctcctgttgctccatgattgcgaaaactctttctattccaagg 2868386

                                                                           
Query: 492     ctgacgccaacagcagggacttgcttgttgctgaacatgccgacaagcttgtcgtacctg 551
               || || ||||| ||||||||||||||    || ||||| || ||||| ||||| ||||||
Sbjct: 2868387 ctaacaccaacggcagggacttgcttcccactaaacataccaacaaggttgtcatacctg 2868446

                                          
Query: 552     ccaccagcagcaatagagccaacctgt 578
               || ||||||||||| ||||||||||||
Sbjct: 2868447 cctccagcagcaatggagccaacctgt 2868473
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>emb|AJ720198.1| Gallus gallus mRNA for hypothetical protein, clone 12f15
          Length = 1983

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 594  acagcttcatatatcacacctgtgtagtaatcaaggcctc 633
            ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 1021 acagcctcatatatcacccctgtgtagtaatctaggcctc 982
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>ref|NM_001006144.1| Gallus gallus histidyl-tRNA synthetase (HARS), mRNA
          Length = 1983

 Score = 56.0 bits (28), Expect = 2e-04
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                    
Query: 594  acagcttcatatatcacacctgtgtagtaatcaaggcctc 633
            ||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 1021 acagcctcatatatcacccctgtgtagtaatctaggcctc 982
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>gb|AF378555.1|AF378555 Ophiostoma novo-ulmi clone 31 histidine-tRNA ligase precursor-like
           protein mRNA, partial cds
          Length = 554

 Score = 48.1 bits (24), Expect = 0.043
 Identities = 36/40 (90%)
 Strand = Plus / Minus

                                                   
Query: 526 acatgccgacaagcttgtcgtacctgccaccagcagcaat 565
           ||||||||||||| |||||||| | ||||||||| |||||
Sbjct: 121 acatgccgacaaggttgtcgtagcggccaccagcggcaat 82
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>ref|NM_111144.2| Arabidopsis thaliana ATP binding / histidine-tRNA ligase/ tRNA
           ligase AT3G02760 mRNA, complete cds
          Length = 1669

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                      
Query: 594 acagcttcatatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaa 652
           ||||||||| | || || || |||||||||||||| |||||||| || |||| ||||||
Sbjct: 974 acagcttcaaagatgacgccggtgtagtaatcaagacctctagctagacttagatcaaa 916
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>ref|XM_387056.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG06880.1)
            partial mRNA
          Length = 1656

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                   
Query: 524  gaacatgccgacaagcttgtcgtacctgccaccagcagc 562
            |||||||||||| || |||||||| ||||| ||||||||
Sbjct: 1053 gaacatgccgacgaggttgtcgtatctgcctccagcagc 1015
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>gb|AC018363.8|ATAC018363 Arabidopsis thaliana chromosome III BAC F13E7 genomic sequence,
             complete sequence
          Length = 100559

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 50/59 (84%)
 Strand = Plus / Minus

                                                                        
Query: 594   acagcttcatatatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaa 652
             ||||||||| | || || || |||||||||||||| |||||||| || |||| ||||||
Sbjct: 88093 acagcttcaaagatgacgccggtgtagtaatcaagacctctagctagacttagatcaaa 88035
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>gb|AE016816.1| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome III,
              complete sequence
          Length = 907057

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                             
Query: 525    aacatgccgacaagcttgtcgtacctgccaccagcagcaatagagcc 571
              |||||||||||||| |||||||| | |||||| || ||||| |||||
Sbjct: 673909 aacatgccgacaaggttgtcgtaacggccaccggcggcaatggagcc 673863
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>ref|NM_208942.1| Eremothecium gossypii ACR187Wp (ACR187W), mRNA
          Length = 1626

 Score = 46.1 bits (23), Expect = 0.17
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 525  aacatgccgacaagcttgtcgtacctgccaccagcagcaatagagcc 571
            |||||||||||||| |||||||| | |||||| || ||||| |||||
Sbjct: 1136 aacatgccgacaaggttgtcgtaacggccaccggcggcaatggagcc 1090
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>emb|Z97056.1|HS434P1 Human DNA sequence from clone RP3-434P1 on chromosome 22, complete
            sequence
          Length = 124990

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 209  gtccttcagcttcaccttccca 230
            ||||||||||||||||||||||
Sbjct: 5790 gtccttcagcttcaccttccca 5811
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>emb|AL157838.24| Human DNA sequence from clone RP4-724E16 on chromosome 20q13.12-13.32
             Contains the ZNF217 gene for zinc finger protein 217, the
             gene for a novel protein (FLJ14031) and two CpG islands,
             complete sequence
          Length = 128871

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 209   gtccttcagcttcaccttccca 230
             ||||||||||||||||||||||
Sbjct: 78687 gtccttcagcttcaccttccca 78708
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>gb|AY119278.1| Drosophila melanogaster SD26982 full insert cDNA
          Length = 1942

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 438 ttcttttccttctcctgttgctccat 463
           |||||||||||||||||||| |||||
Sbjct: 640 ttcttttccttctcctgttgttccat 615
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>gb|AF312915.1|AF312915 Homo sapiens chromosome 20 clones 97 and 127, complete sequence
          Length = 121143

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 209    gtccttcagcttcaccttccca 230
              ||||||||||||||||||||||
Sbjct: 112423 gtccttcagcttcaccttccca 112444
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>gb|AC005375.4|AC005375 Homo sapiens chromosome 17, clone hRPK.388_F_14, complete sequence
          Length = 149030

 Score = 44.1 bits (22), Expect = 0.68
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 288   tactttatgtggttctgcaccc 309
             ||||||||||||||||||||||
Sbjct: 14538 tactttatgtggttctgcaccc 14559
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>gb|AC155164.5| Mus musculus BAC clone RP24-74L7 from chromosome 8, complete sequence
          Length = 193057

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 327   tctgcctttatcccagcactc 347
             |||||||||||||||||||||
Sbjct: 83598 tctgcctttatcccagcactc 83578
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>ref|XM_462062.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0G12969g)
            partial mRNA
          Length = 1641

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 597  gcttcatatatcacacctgtgtagtaatc 625
            |||||||| |||| |||||||||||||||
Sbjct: 1019 gcttcataaatcaaacctgtgtagtaatc 991
to top
>ref|XM_949478.1| Theileria annulata strain Ankara histidyl-tRNA synthetase (TA19080)
            partial mRNA
          Length = 1752

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 42/49 (85%)
 Strand = Plus / Minus

                                                             
Query: 604  atatcacacctgtgtagtaatcaaggcctctagcaaggcttaaatcaaa 652
            ||||||||||||||||||| || |  ||||| |||||||| | ||||||
Sbjct: 1222 atatcacacctgtgtagtagtctaatcctctggcaaggctcatatcaaa 1174
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>emb|CR382139.1| Debaryomyces hansenii chromosome G of strain CBS767 of Debaryomyces
              hansenii
          Length = 2051428

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 597    gcttcatatatcacacctgtgtagtaatc 625
              |||||||| |||| |||||||||||||||
Sbjct: 995696 gcttcataaatcaaacctgtgtagtaatc 995668
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>ref|NM_061043.2| Caenorhabditis elegans INSulin related family member (ins-30)
           (ins-30) mRNA, complete cds
          Length = 391

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 433 cctggttcttttccttctcct 453
           |||||||||||||||||||||
Sbjct: 15  cctggttcttttccttctcct 35
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>gb|AC004846.2|AC004846 Homo sapiens PAC clone RP4-647C14 from 14q24.3, complete sequence
          Length = 154616

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 218   cttcaccttcccatccctcaa 238
             |||||||||||||||||||||
Sbjct: 38755 cttcaccttcccatccctcaa 38775
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>emb|Z82082.1|CEZC334 Caenorhabditis elegans Cosmid ZC334, complete sequence
          Length = 35836

 Score = 42.1 bits (21), Expect = 2.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 433   cctggttcttttccttctcct 453
             |||||||||||||||||||||
Sbjct: 30391 cctggttcttttccttctcct 30371


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,848,225
Number of Sequences: 3902068
Number of extensions: 7848225
Number of successful extensions: 148785
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 148661
Number of HSP's gapped (non-prelim): 101
length of query: 768
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 745
effective length of database: 17,143,297,704
effective search space: 12771756789480
effective search space used: 12771756789480
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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