| Clone Name | rbags22e20 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | V014_FOWPV (Q9J5I7) Putative ankyrin repeat protein FPV014 | 28 | 6.7 | 2 | LRC8C_RAT (Q498T9) Leucine-rich repeat-containing protein 8C | 28 | 8.7 | 3 | LRC8C_MOUSE (Q8R502) Leucine-rich repeat-containing protein 8C (... | 28 | 8.7 | 4 | LRC8C_HUMAN (Q8TDW0) Leucine-rich repeat-containing protein 8C (... | 28 | 8.7 |
|---|
>V014_FOWPV (Q9J5I7) Putative ankyrin repeat protein FPV014| Length = 437 Score = 28.1 bits (61), Expect = 6.7 Identities = 11/23 (47%), Positives = 16/23 (69%) Frame = -1 Query: 91 RRSL*RCCMSTDDMYVAKCIVCL 23 RRSL C++ DD +AKC+ C+ Sbjct: 341 RRSLLDLCLNCDDNAIAKCLNCI 363
>LRC8C_RAT (Q498T9) Leucine-rich repeat-containing protein 8C| Length = 803 Score = 27.7 bits (60), Expect = 8.7 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 85 IAFILFAS*LDI--NHYHILPPFLNTC 159 I +LF S LDI NH+ +LPP L C Sbjct: 748 IGNLLFLSYLDIKGNHFEVLPPELGDC 774
>LRC8C_MOUSE (Q8R502) Leucine-rich repeat-containing protein 8C (Protein AD158)| Length = 803 Score = 27.7 bits (60), Expect = 8.7 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 85 IAFILFAS*LDI--NHYHILPPFLNTC 159 I +LF S LDI NH+ +LPP L C Sbjct: 748 IGNLLFLSYLDIKGNHFEVLPPELGDC 774
>LRC8C_HUMAN (Q8TDW0) Leucine-rich repeat-containing protein 8C (Protein AD158)| Length = 803 Score = 27.7 bits (60), Expect = 8.7 Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%) Frame = +1 Query: 85 IAFILFAS*LDI--NHYHILPPFLNTC 159 I +LF S LD+ NH+ ILPP L C Sbjct: 748 IGNLLFLSYLDVKGNHFEILPPELGDC 774 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 24,574,885 Number of Sequences: 219361 Number of extensions: 354883 Number of successful extensions: 652 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 645 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 652 length of database: 80,573,946 effective HSP length: 37 effective length of database: 72,457,589 effective search space used: 1738982136 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)