ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags21p13 |
|---|---|
| Clone Library Name | barley_pub |
>RL21_ARATH (Q43291) 60S ribosomal protein L21| Length = 164 Score = 152 bits (385), Expect = 1e-37 Identities = 73/89 (82%), Positives = 78/89 (87%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQ+GNRII+KRIHVRVEHVQ SRC EEF RK ND+LKA AKA GE ISTKRQP GP Sbjct: 76 VNKQIGNRIIRKRIHVRVEHVQQSRCAEEFKLRKKKNDELKAAAKANGETISTKRQPKGP 135 Query: 201 KPGFMVEGTTIETVTPIPYDVVNDLKGGY 115 KPGFMVEG T+ETVTPIPYDVVNDLKGGY Sbjct: 136 KPGFMVEGMTLETVTPIPYDVVNDLKGGY 164
>RL21B_YEAST (Q12672) 60S ribosomal protein L21-B| Length = 160 Score = 83.2 bits (204), Expect = 1e-16 Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAKA+G + KRQPA P Sbjct: 76 INKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQP 135 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + +V EG +T+ P+PY+ Sbjct: 136 RESRIVSTEGNVPQTLAPVPYE 157
>RL21A_YEAST (Q02753) 60S ribosomal protein L21-A| Length = 160 Score = 83.2 bits (204), Expect = 1e-16 Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 INK VGNR ++KR+++RVEH++ S+C +EFL+R N +AEAKA+G + KRQPA P Sbjct: 76 INKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAKAQGVAVQLKRQPAQP 135 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + +V EG +T+ P+PY+ Sbjct: 136 RESRIVSTEGNVPQTLAPVPYE 157
>RL21_CYAPA (O82574) 60S ribosomal protein L21| Length = 161 Score = 75.1 bits (183), Expect = 4e-14 Identities = 42/83 (50%), Positives = 56/83 (67%), Gaps = 3/83 (3%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK-ARGEVISTKRQPAG 205 INK+V +RIIKKRIHVR++HV+ S C + FL+R NDK+K +A A+ V STKR P Sbjct: 76 INKRVRHRIIKKRIHVRIDHVKKSSCRDSFLKRVKENDKIKHDAHVAKLPVPSTKRLPVL 135 Query: 204 PKPGFMV--EGTTIETVTPIPYD 142 PK G ++ +G ET IPY+ Sbjct: 136 PKAGAIIKSKGQVPETCHAIPYE 158
>RL21_HUMAN (P46778) 60S ribosomal protein L21| Length = 159 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KRQPA P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPP 134 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_CHILA (Q6QN05) 60S ribosomal protein L21| Length = 159 Score = 72.8 bits (177), Expect = 2e-13 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KRQPA P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRQPAPP 134 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21B_SCHPO (O42706) 60S ribosomal protein L21-B| Length = 160 Score = 72.4 bits (176), Expect = 2e-13 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAKA+G+ + +RQPA P Sbjct: 76 IYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPP 135 Query: 201 KPGFMVEGTTIETVT--PIPYD 142 V E VT P+ YD Sbjct: 136 ATAHFVSTENNEPVTLHPVAYD 157
>RL21A_SCHPO (Q9UUC1) 60S ribosomal protein L21-A| Length = 160 Score = 72.4 bits (176), Expect = 2e-13 Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 I K VGNR ++KR++VR+EHV+ S+C ++FL R N+ + EAKA+G+ + +RQPA P Sbjct: 76 IYKVVGNRYMEKRVNVRIEHVKHSKCRQDFLDRVKANEAKRKEAKAQGKTVQLRRQPAPP 135 Query: 201 KPGFMVEGTTIETVT--PIPYD 142 V E VT P+ YD Sbjct: 136 AKAHFVSTENNEPVTLHPVAYD 157
>RL21_RAT (P20280) 60S ribosomal protein L21| Length = 159 Score = 68.2 bits (165), Expect = 5e-12 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + QPA P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLNGQPAPP 134 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_MOUSE (O09167) 60S ribosomal protein L21| Length = 159 Score = 67.8 bits (164), Expect = 6e-12 Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 2/82 (2%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQV +I+ KRI+VR+EH++ S+ + FL+R ND+ K EAK +G + KR A P Sbjct: 75 VNKQVKGKILAKRINVRIEHIKHSKSRDSFLKRVKENDQKKKEAKEKGTWVQLKRHAAPP 134 Query: 201 KPGFMV--EGTTIETVTPIPYD 142 + V G E + PIPY+ Sbjct: 135 REAHFVRTNGKEPELLEPIPYE 156
>RL21_PYUST (P49667) 60S ribosomal protein L21 (Fragment)| Length = 155 Score = 67.0 bits (162), Expect = 1e-11 Identities = 34/81 (41%), Positives = 51/81 (62%), Gaps = 1/81 (1%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGP 202 +NKQV RII KRI+VR+EH++ S+ F+QR N++ + EA+ + ++ KRQP P Sbjct: 74 VNKQVRGRIIAKRINVRIEHIKHSKSRISFIQRVHENERKRKEAREKKIRVNLKRQPQQP 133 Query: 201 KPGFMVEGTT-IETVTPIPYD 142 + G V + E V PIPY+ Sbjct: 134 RTGHFVRSSAEPELVEPIPYE 154
>RL21_CAEEL (P34334) 60S ribosomal protein L21| Length = 160 Score = 62.4 bits (150), Expect = 3e-10 Identities = 30/85 (35%), Positives = 53/85 (62%), Gaps = 3/85 (3%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGE-VISTKRQPAG 205 +NK+V I+ KRI++R+EH++PS+C +FL R +ND+ + AK+ G+ V + KR P Sbjct: 75 VNKRVRGNILPKRINIRIEHIKPSKCRTDFLNRVKSNDEKRKAAKSAGQPVPALKRLPVA 134 Query: 204 PKPGFMV--EGTTIETVTPIPYDVV 136 P+ V + E + P+ +++V Sbjct: 135 PRGAHTVTTQNNEPELLAPLRFEIV 159
>RL21_ENTHI (P38653) 60S ribosomal protein L21| Length = 166 Score = 62.0 bits (149), Expect = 3e-10 Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 9/89 (10%) Frame = -3 Query: 381 INKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKL-------NNDKLKAEAKARGEVIST 223 +NK+V NRI+ KR+H+ EH++PS C ++FL+RK N +LK E K + Sbjct: 76 VNKKVNNRIVVKRLHISPEHIRPSGCQKDFLERKAAVAAIRKQNIQLKKEGKPL-LPLPA 134 Query: 222 KRQPAGPKPGFMVEGTTIE--TVTPIPYD 142 KR P P+P +++G I+ TV P+ ++ Sbjct: 135 KRLPKQPRPAELIKGADIKFTTVAPLKFE 163
>RL21_ENCCU (Q8SRW8) 60S ribosomal protein L21| Length = 160 Score = 46.2 bits (108), Expect = 2e-05 Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 1/60 (1%) Frame = -3 Query: 375 KQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVIS-TKRQPAGPK 199 K+V + + K+I VR+EHV+ SRC+EE +R L ++ +A++RG V++ +KR+ GP+ Sbjct: 77 KRVRGKYVIKKIIVRIEHVRKSRCSEESQKRILMAAEMARDAESRGVVLAPSKRKIEGPR 136
>PACC_KLULA (Q6CQ07) pH-response transcription factor pacC/RIM101| Length = 517 Score = 30.8 bits (68), Expect = 0.83 Identities = 16/50 (32%), Positives = 27/50 (54%) Frame = -3 Query: 345 RIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKP 196 R+HV+++ S CN++F + + LK K E +S ++ GPKP Sbjct: 169 RVHVQLKPFACSTCNKKFKRPQ----DLKKHLKVHNEELSLLKKKRGPKP 214
>ZN691_MOUSE (Q3TDE8) Zinc finger protein 691| Length = 283 Score = 29.6 bits (65), Expect = 1.8 Identities = 12/27 (44%), Positives = 18/27 (66%) Frame = -3 Query: 363 NRIIKKRIHVRVEHVQPSRCNEEFLQR 283 NRI +RIH+ +H Q ++C E F +R Sbjct: 125 NRIRHERIHLEEKHYQCAKCQESFRRR 151
>FAD6C_SPIOL (P48629) Omega-6 fatty acid desaturase, chloroplast precursor (EC| 1.14.19.-) Length = 447 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/38 (34%), Positives = 19/38 (50%) Frame = +1 Query: 211 WLPLCADDLTTGLGLRLQLVIVEFPLEELLIAPGWLHV 324 WLP+ +D+ + GLR L+ PL + WL V Sbjct: 223 WLPIMKEDIESSPGLRKALIYAYGPLRTWMSIAHWLKV 260
>TBB_BOMMO (P41385) Tubulin beta chain (Beta tubulin)| Length = 450 Score = 29.3 bits (64), Expect = 2.4 Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 3/30 (10%) Frame = +1 Query: 124 LEIVDDIVR---DGCDCLNGGALHHEPGLG 204 LE V D+VR +GCDCL G L H G G Sbjct: 113 LETVLDVVRKEAEGCDCLQGFQLVHSLGGG 142
>BMS1_YEAST (Q08965) Ribosome biogenesis protein BMS1| Length = 1183 Score = 28.9 bits (63), Expect = 3.1 Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%) Frame = -3 Query: 315 PSRCNEEFLQRKLNN---DKLKAEAKARGEV 232 P C F Q+KL++ +K+K EAKA GE+ Sbjct: 305 PDPCPTPFYQQKLDDFEREKMKEEAKANGEI 335
>ANK3_HUMAN (Q12955) Ankyrin-3 (ANK-3) (Ankyrin-G)| Length = 4377 Score = 28.1 bits (61), Expect = 5.4 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 4/68 (5%) Frame = -3 Query: 348 KRIHVRVEHVQPSRCNEEFLQ----RKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVE 181 K + V V VQ + E+ +Q +K+ + + K + RG +T++Q P P E Sbjct: 3090 KTLPVYVSFVQVGKQYEKEIQQGGVKKIISQECKTVQETRGTFYTTRQQKQPPSPQGSPE 3149 Query: 180 GTTIETVT 157 T+E V+ Sbjct: 3150 DDTLEQVS 3157
>HN_PI3HU (P12563) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -3 Query: 327 EHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIP 148 + V P R + + LN D ++ T + P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLTMPTTVDGCVRTP 194 Query: 147 YDVVNDLKGGY 115 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3HA (P12561) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -3 Query: 327 EHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIP 148 + V P R + + LN D ++ T + P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 147 YDVVNDLKGGY 115 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>HN_PI3H4 (P08492) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 28.1 bits (61), Expect = 5.4 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -3 Query: 327 EHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIP 148 + V P R + + LN D ++ T + P PG + TT++ P Sbjct: 135 QEVPPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 147 YDVVNDLKGGY 115 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>TBB_PHANO (P41799) Tubulin beta chain (Beta tubulin)| Length = 447 Score = 27.7 bits (60), Expect = 7.0 Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVDDIV------RDGCDCLNGGALHHEPGLG 204 E+VD ++ R+GCDCL G + H G G Sbjct: 111 ELVDQVLDVVRREREGCDCLQGFQITHSLGGG 142
>TBB_DICDI (P32256) Tubulin beta chain (Beta tubulin)| Length = 455 Score = 27.7 bits (60), Expect = 7.0 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%) Frame = +1 Query: 115 VTTLEIVDDIVR---DGCDCLNGGALHHEPGLG 204 V +E V D+VR +GCDCL G + H G G Sbjct: 115 VELVESVLDVVRRETEGCDCLQGFQVTHSIGGG 147
>TBB2_DROME (P61857) Tubulin beta-2 chain (Beta-2 tubulin)| Length = 446 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D+VR +GCDCL G L H G G Sbjct: 111 ELVDSVLDVVRKESEGCDCLQGFQLTHSLGGG 142
>TBB2_DROHY (P61858) Tubulin beta-2 chain (Beta-2 tubulin)| Length = 446 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D+VR +GCDCL G L H G G Sbjct: 111 ELVDSVLDVVRKESEGCDCLQGFQLTHSLGGG 142
>TBB2_DROER (P83130) Tubulin beta-2 chain (Beta-2 tubulin)| Length = 446 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D+VR +GCDCL G L H G G Sbjct: 111 ELVDSVLDVVRKESEGCDCLQGFQLTHSLGGG 142
>TBB1_NOTCO (P36221) Tubulin beta-1 chain (Beta-1 tubulin)| Length = 446 Score = 27.7 bits (60), Expect = 7.0 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D+VR +GCDCL G L H G G Sbjct: 111 ELVDSVLDVVRKEAEGCDCLQGFQLTHSLGGG 142
>HN_PI3HW (P12565) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 27.7 bits (60), Expect = 7.0 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -3 Query: 327 EHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIP 148 + V P R + + LN D ++ T + P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCVRTP 194 Query: 147 YDVVNDLKGGY 115 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>TRPA_MYCLE (Q9CC53) Tryptophan synthase alpha chain (EC 4.2.1.20)| Length = 270 Score = 27.3 bits (59), Expect = 9.1 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +1 Query: 118 TTLEIVDDIVRDGCDCLNGGALHHEPGL-GPCWLPLCADDLTTGLGLRLQLVIVE 279 T+++ + ++V GCD + G + +PG+ GP L G+ +R L VE Sbjct: 40 TSVDAMIELVESGCDIIEVGVPYSDPGMDGPTIARATEVALRGGVRVRDTLAAVE 94
>ZN691_HUMAN (Q5VV52) Zinc finger protein 691| Length = 312 Score = 27.3 bits (59), Expect = 9.1 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -3 Query: 363 NRIIKKRIHVRVEHVQPSRCNEEFLQR 283 NRI +RIH+ +H + +C E F +R Sbjct: 157 NRIRHERIHLEEKHYKCPKCQESFRRR 183
>NISC_LACLA (Q03202) Nisin biosynthesis protein nisC| Length = 418 Score = 27.3 bits (59), Expect = 9.1 Identities = 10/22 (45%), Positives = 14/22 (63%) Frame = -3 Query: 186 VEGTTIETVTPIPYDVVNDLKG 121 +EG +E +TP YDV+ L G Sbjct: 127 IEGFNLENITPPDYDVIEGLSG 148
>TBB1_BRUPA (P18241) Tubulin beta-1 chain (Beta-1 tubulin)| Length = 448 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D++R +GCDCL G L H G G Sbjct: 111 ELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGG 142
>DCR1C_RAT (Q5XIX3) Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C| protein) (SNM1-like protein) Length = 698 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/49 (30%), Positives = 22/49 (44%) Frame = -3 Query: 264 LKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGG 118 L ++ K+ G+ S + PKP + + IE P D DLK G Sbjct: 568 LSSQEKSGGDSTSLNKDTYKPKPKDSISASQIEQNALCPQDTHCDLKSG 616
>HN_PI3HT (P12562) Hemagglutinin-neuraminidase (EC 3.2.1.18)| Length = 572 Score = 27.3 bits (59), Expect = 9.1 Identities = 18/71 (25%), Positives = 28/71 (39%) Frame = -3 Query: 327 EHVQPSRCNEEFLQRKLNNDKLKAEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIP 148 + V P R + + LN D ++ T + P PG + TT++ P Sbjct: 135 QEVLPQRITHDVGIKPLNPDDFWRCTSGLPSLMKTPKIRLMPGPGLLAMPTTVDGCIRTP 194 Query: 147 YDVVNDLKGGY 115 V+NDL Y Sbjct: 195 SLVINDLIYAY 205
>TBB2_CAEEL (P52275) Tubulin beta-2 chain (Beta-2 tubulin)| Length = 450 Score = 27.3 bits (59), Expect = 9.1 Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 6/32 (18%) Frame = +1 Query: 127 EIVD---DIVR---DGCDCLNGGALHHEPGLG 204 E+VD D++R +GCDCL G L H G G Sbjct: 111 ELVDNVLDVIRKEAEGCDCLQGFQLTHSLGGG 142 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 46,467,133 Number of Sequences: 219361 Number of extensions: 783239 Number of successful extensions: 3128 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 3042 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3127 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 1391514312 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
