| Clone Name | rbags22e17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | TXA1_ANDAU (Q4LCT3) Toxin-like peptide AaF1CA1 precursor | 32 | 2.2 | 2 | FKBP3_ARATH (Q9SCY2) FKBP-type peptidyl-prolyl cis-trans isomera... | 31 | 3.7 | 3 | S23IP_HUMAN (Q9Y6Y8) SEC23-interacting protein (p125) | 30 | 8.2 | 4 | PHOSP_HENDV (O55778) Phosphoprotein (Protein P) | 30 | 8.2 | 5 | S23IP_MOUSE (Q6NZC7) SEC23-interacting protein | 30 | 8.2 |
|---|
>TXA1_ANDAU (Q4LCT3) Toxin-like peptide AaF1CA1 precursor| Length = 80 Score = 31.6 bits (70), Expect = 2.2 Identities = 12/22 (54%), Positives = 14/22 (63%) Frame = -1 Query: 627 YGFCSISRWLFHCWAEILEDKD 562 YG+C W F CW E LEDK+ Sbjct: 60 YGYC----WFFTCWCEYLEDKN 77
>FKBP3_ARATH (Q9SCY2) FKBP-type peptidyl-prolyl cis-trans isomerase 3,| chloroplast precursor (EC 5.2.1.8) (PPIase) (Rotamase) (AtFKBP13) (FK506-binding protein 1) Length = 208 Score = 30.8 bits (68), Expect = 3.7 Identities = 13/48 (27%), Positives = 27/48 (56%) Frame = -2 Query: 551 DMNYSRGRNMLNQLGLQNYEKNFKKGLLTDETLPLLNESALRDVNIPP 408 D +Y+RG+ + ++G+ K + +G+L + +P + R + IPP Sbjct: 127 DSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPMLTGGKRTLRIPP 174
>S23IP_HUMAN (Q9Y6Y8) SEC23-interacting protein (p125)| Length = 1000 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/56 (28%), Positives = 27/56 (48%) Frame = -2 Query: 521 LNQLGLQNYEKNFKKGLLTDETLPLLNESALRDVNIPPGPRLVILDHIKREPGLAK 354 L L L Y F+K + E+L + L+++ IP GPR I + ++ + K Sbjct: 653 LEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVEHKAAKLK 708
>PHOSP_HENDV (O55778) Phosphoprotein (Protein P)| Length = 707 Score = 29.6 bits (65), Expect = 8.2 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%) Frame = -2 Query: 587 GQKFSKTKTHNEDMNYSRGRNMLNQLGLQNYE--KNFKKGLLTDETLPLLNESALRDVNI 414 G++ KT N ++ GRN+L Q L +++ KNF+ G LTDE P + +RD I Sbjct: 582 GERKGKT---NPELKPVIGRNILEQQELFSFDNLKNFRDGSLTDE--PYGGVARIRDDLI 636 Query: 413 PP 408 P Sbjct: 637 LP 638
>S23IP_MOUSE (Q6NZC7) SEC23-interacting protein| Length = 998 Score = 29.6 bits (65), Expect = 8.2 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -2 Query: 521 LNQLGLQNYEKNFKKGLLTDETLPLLNESALRDVNIPPGPRLVILDHIK 375 L L L +Y F+K + E+L + L+++ IP GPR I + +K Sbjct: 649 LEALSLFDYISTFEKEKIDMESLLMCTVDDLKEMGIPLGPRKKIANFVK 697 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,081,052 Number of Sequences: 219361 Number of extensions: 1660424 Number of successful extensions: 3773 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3700 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3773 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)