ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22e17
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_472387.1| Oryza sativa (japonica cultivar-group), predic... 188 2e-44
2emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 121 3e-24
3dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 121 3e-24
4gb|AY112119.1| Zea mays CL11935_1 mRNA sequence 117 5e-23
5gb|BT019295.1| Zea mays clone Contig968.F mRNA sequence 113 7e-22
6gb|BT017347.1| Zea mays clone EL01N0323E09.c mRNA sequence 94 7e-16
7gb|AY107532.1| Zea mays PCO116468 mRNA sequence 86 2e-13
8dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
9dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic D... 78 4e-11
10dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 6e-10
11gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory prote... 46 0.14
12gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, compl... 46 0.14
13gb|AC011465.4|AC011465 Homo sapiens chromosome 19 clone CTC-450M... 46 0.14
14emb|AL365178.10| Human DNA sequence from clone RP11-454L1 on chr... 44 0.57
15emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chr... 44 0.57
16gb|AC100794.2| Homo sapiens chromosome 18, clone CTD-2559F21, co... 44 0.57
17gb|L17411.1|HUMCR1SF34 Human complement receptor type 1 (alleles... 44 0.57
18gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chrom... 42 2.3
19gb|AE014075.1| Escherichia coli CFT073, complete genome 42 2.3
20gb|CP000243.1| Escherichia coli UTI89, complete genome 42 2.3
21emb|AL591969.4| Human DNA sequence from clone RP11-22E19 on chro... 42 2.3
22gb|AC073584.6| Homo sapiens chromosome 10 clone RP11-47O13, comp... 42 2.3
23gb|AC158742.3| Oryctolagus cuniculus, clone Oryctolagus cuniculu... 42 2.3
24ref|NM_105735.1| Arabidopsis thaliana calcium ion binding AT1G70... 40 8.9
25gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, com... 40 8.9
26gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, ... 40 8.9
27gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome ... 40 8.9
28gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosom... 40 8.9
29gb|AC161873.5| Mus musculus BAC clone RP24-100P9 from chromosome... 40 8.9
30gb|AY392168.1| Scyliorhinus canicula ribosomal protein large P0 ... 40 8.9
31gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome 40 8.9
32gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome 40 8.9
33gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Can... 40 8.9
34gb|AC121605.3| Mus musculus BAC clone RP23-312E16 from 1, comple... 40 8.9
35gb|AE004248.1| Vibrio cholerae O1 biovar eltor str. N16961 chrom... 40 8.9
36gb|AC118539.5| Mus musculus strain 129/Sv clone ct7-282g9 map 14... 40 8.9
37gb|AF535154.1| Vibrio harveyi methionine synthetase (metE) and M... 40 8.9
38gb|AY143815.1| Arabidopsis thaliana At1g70670/F5A18_15 mRNA, com... 40 8.9
39gb|AC159096.2| Mus musculus chromosome 1, clone RP24-95N15, comp... 40 8.9
40emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 o... 40 8.9
41dbj|AK132502.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.9
42gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, comple... 40 8.9
43gb|AC079856.7| Homo sapiens BAC clone RP11-521B4 from 4, complet... 40 8.9
44gb|AY056102.1| Arabidopsis thaliana At1g70670/F5A18_15 mRNA, com... 40 8.9
45dbj|AK036465.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 8.9
46dbj|AK036454.1| Mus musculus adult male bone cDNA, RIKEN full-le... 40 8.9
47dbj|AK028927.1| Mus musculus 10 days neonate skin cDNA, RIKEN fu... 40 8.9
48gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-4... 40 8.9
49gb|AC087083.2|AC087083 Homo sapiens chromosome 3 clone 138a17 ma... 40 8.9
50gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complet... 40 8.9
51gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A... 40 8.9
52gb|AY088279.1| Arabidopsis thaliana clone 5143 mRNA, complete se... 40 8.9
53ref|XM_234275.3| PREDICTED: Rattus norvegicus dishevelled associ... 40 8.9
54gb|AC024057.5| Homo sapiens chromosome 3 clone RP11-299N3 map 3p... 40 8.9
55gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid p... 40 8.9
56gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome 40 8.9
57emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chr... 40 8.9
58emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on ch... 40 8.9 
>ref|XM_472387.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 828

 Score =  188 bits (95), Expect = 2e-44
 Identities = 161/183 (87%)
 Strand = Plus / Minus

                                                                       
Query: 373 cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctgagt 432
           |||| |||||||||||| |||| |||||| |||||||||||||| ||||||||||| |||
Sbjct: 788 ctttgaatgtgatcaaggatgagaagtctgggaccaggggggatcttcacatctctaagt 729

                                                                       
Query: 433 gcgctttcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattcttc 492
           || || |||||||| || |||| ||||| |||||| ||||||||||||||||||||||||
Sbjct: 728 gcactgtcattgagtaggggcaatgtttgatcagtaagaagacccttcttgaaattcttc 669

                                                                       
Query: 493 tcatagttttggaggcccaattggttcaacatatttcttccacgagaatagttcatatct 552
           |||||||| || || || ||||| |||||||||||||| ||||| |||||||  ||||||
Sbjct: 668 tcatagttctgaagccctaattgtttcaacatatttctcccacgggaatagtatatatct 609

              
Query: 553 tca 555
           |||
Sbjct: 608 tca 606



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 71/78 (91%)
 Strand = Plus / Minus

                                                                       
Query: 577 aatttctgcccaacaatgaaaaagccaccttgaaatactgcaaaagccataccagttgta 636
           |||||||| ||||  |||||||| ||||||||||||||||||||||| | ||||||||||
Sbjct: 590 aatttctgaccaatcatgaaaaaaccaccttgaaatactgcaaaagctacaccagttgta 531

                             
Query: 637 attgcattaacaactgga 654
           ||||||||| ||||||||
Sbjct: 530 attgcattagcaactgga 513
to top
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
             complete sequence
          Length = 112404

 Score =  121 bits (61), Expect = 3e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                         
Query: 439   tcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattcttctcatag 498
             |||||||| || |||| ||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 79308 tcattgagtaggggcaatgtttgatcagtaagaagacccttcttgaaattcttctcatag 79367

                                                                      
Query: 499   ttttggaggcccaattggttcaacatatttcttccacgagaatagttcatatcttca 555
             || || || || ||||| |||||||||||||| ||||| |||||||  |||||||||
Sbjct: 79368 ttctgaagccctaattgtttcaacatatttctcccacgggaatagtatatatcttca 79424



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                         
Query: 592   atgaaaaagccaccttgaaatactgcaaaagccataccagttgtaattgcattaacaact 651
             |||||||| ||||||||||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 79707 atgaaaaaaccaccttgaaatactgcaaaagctacaccagttgtaattgcattagcaact 79766

                
Query: 652   gga 654
             |||
Sbjct: 79767 gga 79769



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                         
Query: 373   cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctgagt 432
             |||| |||||||||||| |||| |||||| |||||||||||||| ||||||||||| |||
Sbjct: 79077 ctttgaatgtgatcaaggatgagaagtctgggaccaggggggatcttcacatctctaagt 79136

               
Query: 433   gc 434
             ||
Sbjct: 79137 gc 79138



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                   
Query: 220   tatcttttacaatcatactgctgcctaaagagctcatc 257
             |||||||| |||||| ||| ||||||||||||||||||
Sbjct: 78843 tatcttttccaatcacacttctgcctaaagagctcatc 78880
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  121 bits (61), Expect = 3e-24
 Identities = 103/117 (88%)
 Strand = Plus / Plus

                                                                            
Query: 439      tcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattcttctcatag 498
                |||||||| || |||| ||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 20109403 tcattgagtaggggcaatgtttgatcagtaagaagacccttcttgaaattcttctcatag 20109462

                                                                         
Query: 499      ttttggaggcccaattggttcaacatatttcttccacgagaatagttcatatcttca 555
                || || || || ||||| |||||||||||||| ||||| |||||||  |||||||||
Sbjct: 20109463 ttctgaagccctaattgtttcaacatatttctcccacgggaatagtatatatcttca 20109519



 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 59/63 (93%)
 Strand = Plus / Plus

                                                                            
Query: 592      atgaaaaagccaccttgaaatactgcaaaagccataccagttgtaattgcattaacaact 651
                |||||||| ||||||||||||||||||||||| | ||||||||||||||||||| |||||
Sbjct: 20109802 atgaaaaaaccaccttgaaatactgcaaaagctacaccagttgtaattgcattagcaact 20109861

                   
Query: 652      gga 654
                |||
Sbjct: 20109862 gga 20109864



 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 56/62 (90%)
 Strand = Plus / Plus

                                                                            
Query: 373      cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctgagt 432
                |||| |||||||||||| |||| |||||| |||||||||||||| ||||||||||| |||
Sbjct: 20109172 ctttgaatgtgatcaaggatgagaagtctgggaccaggggggatcttcacatctctaagt 20109231

                  
Query: 433      gc 434
                ||
Sbjct: 20109232 gc 20109233



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 220      tatcttttacaatcatactgctgcctaaagagctcatc 257
                |||||||| |||||| ||| ||||||||||||||||||
Sbjct: 20108938 tatcttttccaatcacacttctgcctaaagagctcatc 20108975
to top
>gb|AY112119.1| Zea mays CL11935_1 mRNA sequence
          Length = 754

 Score =  117 bits (59), Expect = 5e-23
 Identities = 146/175 (83%)
 Strand = Plus / Plus

                                                                       
Query: 370 tctcttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctg 429
           |||||||||||||||||||||||||  || || || ||||| ||||| ||||||||||||
Sbjct: 406 tctcttttaatgtgatcaagtatgaggagcctggggccaggcgggatcttcacatctctg 465

                                                                       
Query: 430 agtgcgctttcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattc 489
           || || || ||  | || || ||||  |||| ||||||||| |||||||||||||| |||
Sbjct: 466 agagcactgtccgtaaggaggggcaaggtttgatcagttaggagacccttcttgaagttc 525

                                                                  
Query: 490 ttctcatagttttggaggcccaattggttcaacatatttcttccacgagaatagt 544
           ||||||||||| |||||||| || |  | || |||  ||||||||||||||||||
Sbjct: 526 ttctcatagttctggaggcctaacttttgcagcatgcttcttccacgagaatagt 580



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                 
Query: 601 ccaccttgaaatactgcaaaagccataccagttgtaattgcattaacaactgga 654
           |||||||||||||| |||||| | | ||||||||||||||||||| | ||||||
Sbjct: 631 ccaccttgaaatacagcaaaaccaacaccagttgtaattgcattagctactgga 684
to top
>gb|BT019295.1| Zea mays clone Contig968.F mRNA sequence
          Length = 1133

 Score =  113 bits (57), Expect = 7e-22
 Identities = 75/81 (92%)
 Strand = Plus / Plus

                                                                       
Query: 574 gagaatttctgcccaacaatgaaaaagccaccttgaaatactgcaaaagccataccagtt 633
           ||||||||||||||||  |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 474 gagaatttctgcccaatcatgaaaaagccaccttgaaatactgcaaaagcaacaccagtt 533

                                
Query: 634 gtaattgcattaacaactgga 654
           ||||||||||| | |||||||
Sbjct: 534 gtaattgcatttaaaactgga 554



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 364 ccaggttctcttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcaca 423
           ||||| || |||||||| || || || |||| |||||| || ||||| ||||| ||||||
Sbjct: 270 ccagggtcccttttaatttggtcgagaatgagaagtctgggtccaggagggatcttcaca 329

                
Query: 424 tctct 428
           |||||
Sbjct: 330 tctct 334
to top
>gb|BT017347.1| Zea mays clone EL01N0323E09.c mRNA sequence
          Length = 1079

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 65/71 (91%)
 Strand = Plus / Minus

                                                                       
Query: 574 gagaatttctgcccaacaatgaaaaagccaccttgaaatactgcaaaagccataccagtt 633
           |||||||||||||| |  |||||||||||||||||||||||||||||||| | |||||||
Sbjct: 598 gagaatttctgcccgatcatgaaaaagccaccttgaaatactgcaaaagcaacaccagtt 539

                      
Query: 634 gtaattgcatt 644
           |||| ||||||
Sbjct: 538 gtaactgcatt 528



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 105/130 (80%)
 Strand = Plus / Minus

                                                                       
Query: 373 cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctgagt 432
           |||||||| || || ||||||| |||||| || ||||| ||||| ||||||||||| || 
Sbjct: 793 cttttaatttggtcgagtatgagaagtctgggtccaggagggatcttcacatctctcaga 734

                                                                       
Query: 433 gcgctttcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattcttc 492
           || || ||  | || || || | ||||| |||| | || |||||| ||||||||||||||
Sbjct: 733 gcactgtccgtaaggagtggtaatgtttgatcattgaggagacccctcttgaaattcttc 674

                     
Query: 493 tcatagtttt 502
           ||||| ||||
Sbjct: 673 tcatactttt 664
to top
>gb|AY107532.1| Zea mays PCO116468 mRNA sequence
          Length = 1087

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 64/71 (90%)
 Strand = Plus / Minus

                                                                       
Query: 574 gagaatttctgcccaacaatgaaaaagccaccttgaaatactgcaaaagccataccagtt 633
           |||||||||||||| |  |||||||||||||||||||||||||| ||||| | |||||||
Sbjct: 610 gagaatttctgcccgatcatgaaaaagccaccttgaaatactgccaaagcaacaccagtt 551

                      
Query: 634 gtaattgcatt 644
           |||| ||||||
Sbjct: 550 gtaactgcatt 540



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                          
Query: 472 agacccttcttgaaattcttctcatagtttt 502
           |||||| ||||||||||||||||||| ||||
Sbjct: 706 agacccctcttgaaattcttctcatactttt 676
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                            
Query: 592      atgaaaaagccaccttgaaatactgcaaaagccataccagttgtaattgcattaacaact 651
                |||||||||||||||||||||| |||||||||   ||||||||||||||||||  |||||
Sbjct: 19277948 atgaaaaagccaccttgaaatattgcaaaagcagcaccagttgtaattgcatttgcaact 19278007

                   
Query: 652      gga 654
                |||
Sbjct: 19278008 gga 19278010



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                                  
Query: 448      agaggcagtgtttcatcagttagaagacccttcttgaaattcttctcata 497
                |||||||  |||| |||||| || ||||||||||| ||||||||||||||
Sbjct: 19276943 agaggcaaagtttgatcagtgagtagacccttcttaaaattcttctcata 19276992



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                        
Query: 373      cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctct 428
                |||||||| ||||| ||||| | |||||| || |||||||| || |||||||||||
Sbjct: 19276779 cttttaatttgatcgagtatcagaagtctggggccagggggaatcttcacatctct 19276834
to top
>dbj|AP004777.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0458B05
          Length = 144917

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 57/63 (90%)
 Strand = Plus / Plus

                                                                         
Query: 592   atgaaaaagccaccttgaaatactgcaaaagccataccagttgtaattgcattaacaact 651
             |||||||||||||||||||||| |||||||||   ||||||||||||||||||  |||||
Sbjct: 45746 atgaaaaagccaccttgaaatattgcaaaagcagcaccagttgtaattgcatttgcaact 45805

                
Query: 652   gga 654
             |||
Sbjct: 45806 gga 45808



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                               
Query: 448   agaggcagtgtttcatcagttagaagacccttcttgaaattcttctcata 497
             |||||||  |||| |||||| || ||||||||||| ||||||||||||||
Sbjct: 44741 agaggcaaagtttgatcagtgagtagacccttcttaaaattcttctcata 44790



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 48/56 (85%)
 Strand = Plus / Plus

                                                                     
Query: 373   cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctct 428
             |||||||| ||||| ||||| | |||||| || |||||||| || |||||||||||
Sbjct: 44577 cttttaatttgatcgagtatcagaagtctggggccagggggaatcttcacatctct 44632
to top
>dbj|AK067722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013120F02, full
            insert sequence
          Length = 2216

 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 103/125 (82%)
 Strand = Plus / Minus

                                                                        
Query: 373  cttttaatgtgatcaagtatgacaagtcttggaccaggggggatattcacatctctgagt 432
            |||||||| ||||| ||||| | |||||| || |||||||| || ||||||||||| || 
Sbjct: 1890 cttttaatttgatcgagtatcagaagtctggggccagggggaatcttcacatctctcaga 1831

                                                                        
Query: 433  gcgctttcattgagaagaggcagtgtttcatcagttagaagacccttcttgaaattcttc 492
            || || ||  | || |||||||  |||| |||||| || ||||||||||| |||||||||
Sbjct: 1830 gcactgtcggtaaggagaggcaaagtttgatcagtgagtagacccttcttaaaattcttc 1771

                 
Query: 493  tcata 497
            |||||
Sbjct: 1770 tcata 1766



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 592 atgaaaaagccaccttgaaatactgca 618
           |||||||||||||||||||||| ||||
Sbjct: 810 atgaaaaagccaccttgaaatattgca 784
to top
>gb|AY050668.1| Homo sapiens PKC-potentiated PP1 inhibitory protein (PPP1R14A) gene,
              complete cds
          Length = 169660

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 398    gtcttggaccaggggggatattc 420
              |||||||||||||||||||||||
Sbjct: 149659 gtcttggaccaggggggatattc 149681
to top
>gb|AC011479.7| Homo sapiens chromosome 19 clone CTB-102L5, complete sequence
          Length = 169661

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 398    gtcttggaccaggggggatattc 420
              |||||||||||||||||||||||
Sbjct: 149660 gtcttggaccaggggggatattc 149682
to top
>gb|AC011465.4|AC011465 Homo sapiens chromosome 19 clone CTC-450M9, complete sequence
          Length = 156997

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 398    gtcttggaccaggggggatattc 420
              |||||||||||||||||||||||
Sbjct: 136334 gtcttggaccaggggggatattc 136312
to top
>emb|AL365178.10| Human DNA sequence from clone RP11-454L1 on chromosome 1 Contains
           the 3' end of the CR1L gene for complement component
           (3b/4b) receptor 1-like and the 5' end of the MCP gene
           for membrane cofactor protein (CD46,
           trophoblast-lymphocyte cross-reactive antigen), complete
           sequence
          Length = 71858

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 471 aagacccttcttgaaattcttc 492
           ||||||||||||||||||||||
Sbjct: 402 aagacccttcttgaaattcttc 381
to top
>emb|AL137789.11| Human DNA sequence from clone RP11-57I17 on chromosome 1q32.1-32.3
              Contains the 3' end of the CR1 gene for complement
              component (3b/4b) receptor 1, including Knops blood group
              system, a membrane cofactor protein (CD46,
              trophoblast-lymphocyte cross-reactive antigen) (MCP)
              pseudogene and the 5' end of the CR1L gene for complement
              component (3b/4b) receptor 1-like, complete sequence
          Length = 145325

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 471    aagacccttcttgaaattcttc 492
              ||||||||||||||||||||||
Sbjct: 143727 aagacccttcttgaaattcttc 143706



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 471   aagacccttcttgaaattcttc 492
             ||||||||||||||||||||||
Sbjct: 42824 aagacccttcttgaaattcttc 42803
to top
>gb|AC100794.2| Homo sapiens chromosome 18, clone CTD-2559F21, complete sequence
          Length = 143575

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 369   ttctcttttaatgtgatcaagt 390
             ||||||||||||||||||||||
Sbjct: 93636 ttctcttttaatgtgatcaagt 93615
to top
>gb|L17411.1|HUMCR1SF34 Human complement receptor type 1 (alleles S and F) gene, exon 40
          Length = 507

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 471 aagacccttcttgaaattcttc 492
           ||||||||||||||||||||||
Sbjct: 395 aagacccttcttgaaattcttc 374
to top
>gb|AC183673.2| Pan troglodytes BAC clone CH251-540O10 from chromosome 1, complete
              sequence
          Length = 185717

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 471    aagacccttcttgaaattctt 491
              |||||||||||||||||||||
Sbjct: 115185 aagacccttcttgaaattctt 115165
to top
>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    ccaatgcaatcacttcagttt 351
              |||||||||||||||||||||
Sbjct: 484240 ccaatgcaatcacttcagttt 484220
to top
>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 331    ccaatgcaatcacttcagttt 351
              |||||||||||||||||||||
Sbjct: 424432 ccaatgcaatcacttcagttt 424412
to top
>emb|AL591969.4| Human DNA sequence from clone RP11-22E19 on chromosome 6 Contains the
             5' end of a novel gene (FLJ23357), complete sequence
          Length = 60886

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 488   tcttctcatagttttggaggc 508
             |||||||||||||||||||||
Sbjct: 27021 tcttctcatagttttggaggc 27001
to top
>gb|AC073584.6| Homo sapiens chromosome 10 clone RP11-47O13, complete sequence
          Length = 171089

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 114   ataaaatttctaccatgacaa 134
             |||||||||||||||||||||
Sbjct: 86874 ataaaatttctaccatgacaa 86894
to top
>gb|AC158742.3| Oryctolagus cuniculus, clone Oryctolagus cuniculus-16721457I9, complete
             sequence
          Length = 35237

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 61    aactctgaataattttcaaaa 81
             |||||||||||||||||||||
Sbjct: 15558 aactctgaataattttcaaaa 15538
to top
>ref|NM_105735.1| Arabidopsis thaliana calcium ion binding AT1G70670 mRNA, complete
           cds
          Length = 987

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  tcttgtctttacacaaataa 62
           ||||||||||||||||||||
Sbjct: 732 tcttgtctttacacaaataa 713
to top
>gb|AC109205.12| Mus musculus chromosome 7, clone RP23-137A4, complete sequence
          Length = 225302

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 267    agagctggactggactggac 286
              ||||||||||||||||||||
Sbjct: 145608 agagctggactggactggac 145589
to top
>gb|CP000099.1| Methanosarcina barkeri str. fusaro chromosome 1, complete sequence
          Length = 4837408

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      aaataactctgaacaagctc 100
               ||||||||||||||||||||
Sbjct: 1124706 aaataactctgaacaagctc 1124725
to top
>gb|AC161872.7| Mus musculus BAC clone RP24-88E7 from chromosome 14, complete sequence
          Length = 226399

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 288   gacttcccagaccatagttt 307
             ||||||||||||||||||||
Sbjct: 59960 gacttcccagaccatagttt 59979
to top
>gb|AC154227.2| Mus musculus BAC clone RP24-142A23 from chromosome 14, complete
            sequence
          Length = 156644

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gaaacttcaatacagataat 174
            ||||||||||||||||||||
Sbjct: 4240 gaaacttcaatacagataat 4259
to top
>gb|AC161873.5| Mus musculus BAC clone RP24-100P9 from chromosome 14, complete sequence
          Length = 240703

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 288    gacttcccagaccatagttt 307
              ||||||||||||||||||||
Sbjct: 142842 gacttcccagaccatagttt 142861
to top
>gb|AY392168.1| Scyliorhinus canicula ribosomal protein large P0 mRNA, partial
          cds
          Length = 769

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 66 tgaataattttcaaaaaata 85
          ||||||||||||||||||||
Sbjct: 27 tgaataattttcaaaaaata 8
to top
>gb|AE017244.1| Mycoplasma hyopneumoniae 7448, complete genome
          Length = 920079

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    gaataattttcaaaaaataa 86
             ||||||||||||||||||||
Sbjct: 37221 gaataattttcaaaaaataa 37240
to top
>gb|AE017243.1| Mycoplasma hyopneumoniae J, complete genome
          Length = 897405

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    gaataattttcaaaaaataa 86
             ||||||||||||||||||||
Sbjct: 30505 gaataattttcaaaaaataa 30524
to top
>gb|AC072028.14| Homo sapiens 3 BAC RP11-190C21 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186739

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 465    agttagaagacccttcttgaaatt 488
              ||||||||| ||||||||||||||
Sbjct: 123799 agttagaagccccttcttgaaatt 123822
to top
>gb|AC121605.3| Mus musculus BAC clone RP23-312E16 from 1, complete sequence
          Length = 196494

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    taattttcaaaaaataactctgaa 93
             |||||||||||| |||||||||||
Sbjct: 89719 taattttcaaaatataactctgaa 89742
to top
>gb|AE004248.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, section 156
            of 251 of the complete chromosome
          Length = 10460

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 586  ccaacaatgaaaaagccaccttga 609
            ||||||||| ||||||||||||||
Sbjct: 6314 ccaacaatgcaaaagccaccttga 6337
to top
>gb|AC118539.5| Mus musculus strain 129/Sv clone ct7-282g9 map 14, complete sequence
          Length = 98063

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   gaaacttcaatacagataat 174
             ||||||||||||||||||||
Sbjct: 61586 gaaacttcaatacagataat 61605
to top
>gb|AF535154.1| Vibrio harveyi methionine synthetase (metE) and MetR (metR) genes,
            complete cds
          Length = 4122

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 586  ccaacaatgaaaaagccaccttga 609
            ||||||||| ||||||||||||||
Sbjct: 3992 ccaacaatgcaaaagccaccttga 4015
to top
>gb|AY143815.1| Arabidopsis thaliana At1g70670/F5A18_15 mRNA, complete cds
          Length = 588

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  tcttgtctttacacaaataa 62
           ||||||||||||||||||||
Sbjct: 484 tcttgtctttacacaaataa 465
to top
>gb|AC159096.2| Mus musculus chromosome 1, clone RP24-95N15, complete sequence
          Length = 189668

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 70    taattttcaaaaaataactctgaa 93
             |||||||||||| |||||||||||
Sbjct: 88960 taattttcaaaatataactctgaa 88937
to top
>emb|AL031056.1|HS111D6 Human DNA sequence from clone RP1-111D6 on chromosome 6q24-25.2
             Contains a pseudogene similar to peripheral myelin protein
             2 (M-FABP) (PMP2)(P2, MP2, FABP8) and two novel genes,
             complete sequence
          Length = 128330

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 131   acaacagcagaaagtagctc 150
             ||||||||||||||||||||
Sbjct: 44146 acaacagcagaaagtagctc 44127
to top
>dbj|AK132502.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
           library, clone:4732469H22 product:unclassifiable, full
           insert sequence
          Length = 2684

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 267 agagctggactggactggac 286
           ||||||||||||||||||||
Sbjct: 878 agagctggactggactggac 859
to top
>gb|AC097489.2| Homo sapiens BAC clone RP11-226A18 from 4, complete sequence
          Length = 152039

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 34     agacattcctcttgtctttacaca 57
              ||||||||||| ||||||||||||
Sbjct: 144580 agacattcctcctgtctttacaca 144557
to top
>gb|AC079856.7| Homo sapiens BAC clone RP11-521B4 from 4, complete sequence
          Length = 155340

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 411  ggggatattcacatctctga 430
            ||||||||||||||||||||
Sbjct: 8912 ggggatattcacatctctga 8931
to top
>gb|AY056102.1| Arabidopsis thaliana At1g70670/F5A18_15 mRNA, complete cds
          Length = 808

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  tcttgtctttacacaaataa 62
           ||||||||||||||||||||
Sbjct: 552 tcttgtctttacacaaataa 533
to top
>dbj|AK036465.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830113C24 product:hypothetical protein,
            full insert sequence
          Length = 2209

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gaaacttcaatacagataat 174
            ||||||||||||||||||||
Sbjct: 1806 gaaacttcaatacagataat 1825
to top
>dbj|AK036454.1| Mus musculus adult male bone cDNA, RIKEN full-length enriched
            library, clone:9830112A06 product:RIKEN cDNA 4932432K03
            gene, full insert sequence
          Length = 2788

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gaaacttcaatacagataat 174
            ||||||||||||||||||||
Sbjct: 1799 gaaacttcaatacagataat 1818
to top
>dbj|AK028927.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched
            library, clone:4732471G23 product:RIKEN cDNA 4932432K03
            gene, full insert sequence
          Length = 3470

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 155  gaaacttcaatacagataat 174
            ||||||||||||||||||||
Sbjct: 1829 gaaacttcaatacagataat 1848
to top
>gb|AC155890.2| Medicago truncatula chromosome 7 BAC clone mth2-49p3, complete sequence
          Length = 127058

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 68    aataattttcaaaaaataac 87
             ||||||||||||||||||||
Sbjct: 86680 aataattttcaaaaaataac 86661
to top
>gb|AC087083.2|AC087083 Homo sapiens chromosome 3 clone 138a17 map 3p, complete sequence
          Length = 176368

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 451    ggcagtgtttcatcagttag 470
              ||||||||||||||||||||
Sbjct: 163982 ggcagtgtttcatcagttag 163963
to top
>gb|AC016766.6| Homo sapiens BAC clone RP11-558I6 from 2, complete sequence
          Length = 194374

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 106   ttctggaaataaaatttcta 125
             ||||||||||||||||||||
Sbjct: 72521 ttctggaaataaaatttcta 72502
to top
>gb|AC011663.7|AC011663 Arabidopsis thaliana chromosome 1 BAC F5A18 genomic sequence, complete
             sequence
          Length = 108582

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 43    tcttgtctttacacaaataa 62
             ||||||||||||||||||||
Sbjct: 58723 tcttgtctttacacaaataa 58742
to top
>gb|AY088279.1| Arabidopsis thaliana clone 5143 mRNA, complete sequence
          Length = 988

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 43  tcttgtctttacacaaataa 62
           ||||||||||||||||||||
Sbjct: 733 tcttgtctttacacaaataa 714
to top
>ref|XM_234275.3| PREDICTED: Rattus norvegicus dishevelled associated activator of
           morphogenesis 1 (predicted) (Daam1_predicted), mRNA
          Length = 3990

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 31  ctgagacattcctcttgtct 50
           ||||||||||||||||||||
Sbjct: 205 ctgagacattcctcttgtct 186
to top
>gb|AC024057.5| Homo sapiens chromosome 3 clone RP11-299N3 map 3p, complete sequence
          Length = 186007

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 451   ggcagtgtttcatcagttag 470
             ||||||||||||||||||||
Sbjct: 97784 ggcagtgtttcatcagttag 97765
to top
>gb|AE001438.3| Clostridium acetobutylicum ATCC 824 megaplasmid pSOL1, complete
             sequence
          Length = 192000

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 596   aaaagccaccttgaaatact 615
             ||||||||||||||||||||
Sbjct: 13501 aaaagccaccttgaaatact 13482
to top
>gb|AE017332.1| Mycoplasma hyopneumoniae 232, complete genome
          Length = 892758

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 67    gaataattttcaaaaaataa 86
             ||||||||||||||||||||
Sbjct: 38405 gaataattttcaaaaaataa 38424
to top
>emb|CT025618.6| Mouse DNA sequence from clone RP24-268L19 on chromosome 14, complete
             sequence
          Length = 139312

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   gaaacttcaatacagataat 174
             ||||||||||||||||||||
Sbjct: 78449 gaaacttcaatacagataat 78430
to top
>emb|AL606498.17| Mouse DNA sequence from clone RP23-197C15 on chromosome 11, complete
             sequence
          Length = 222330

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 53    acacaaataactctgaataatttt 76
             |||||||||| |||||||||||||
Sbjct: 78901 acacaaataagtctgaataatttt 78878


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,323,169
Number of Sequences: 3902068
Number of extensions: 7323169
Number of successful extensions: 159049
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 158642
Number of HSP's gapped (non-prelim): 404
length of query: 654
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 631
effective length of database: 17,143,297,704
effective search space: 10817420851224
effective search space used: 10817420851224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top