ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22e16 |
|---|---|
| Clone Library Name | barley_pub |
>FAB1_YEAST (P34756) 1-phosphatidylinositol-3-phosphate 5-kinase FAB1 (EC| 2.7.1.150) (Phosphatidylinositol-3-phosphate 5-kinase) (Type III PIP kinase) Length = 2278 Score = 139 bits (349), Expect = 1e-32 Identities = 62/120 (51%), Positives = 87/120 (72%), Gaps = 1/120 (0%) Frame = -1 Query: 688 LLDSNLIEALHTKPIFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIG 509 LLD N++E ++ PI + K+ L +VWNDT FLA +VMDYSL++GID + L +G Sbjct: 2154 LLDENMVEYIYESPIHVREYDKKLLRASVWNDTLFLAKMNVMDYSLVIGIDNEGYTLTVG 2213 Query: 508 IIDYLRQYTWDKQLETWVKASGILGGPK-NEAPTIISPMQYKKRFRKAMSKYFLTVPDQW 332 IID++R +TWDK+LE+WVK G++GG + PT+++P QYKKRFR+AM +Y L VPD W Sbjct: 2214 IIDFIRTFTWDKKLESWVKEKGLVGGASVIKQPTVVTPRQYKKRFREAMERYILMVPDPW 2273
>FAB1_SCHPO (O59722) Phosphatidylinositol-4-phosphate 5-kinase fab1 (EC 2.7.1.68)| (1-phosphatidylinositol-4-phosphate kinase) (PIP5K) (PtdIns(4)P-5-kinase) (Diphosphoinositide kinase) Length = 1932 Score = 137 bits (344), Expect = 4e-32 Identities = 65/118 (55%), Positives = 85/118 (72%), Gaps = 1/118 (0%) Frame = -1 Query: 688 LLDSNLIEALHTKPIFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIG 509 LLD NL+E ++ PIF+ + K L +WNDT FL+ ++MDYSL+VGID KKEL +G Sbjct: 1807 LLDENLVELIYESPIFVSEQLKSLLHSCLWNDTLFLSKLNIMDYSLIVGIDYTKKELYVG 1866 Query: 508 IIDYLRQYTWDKQLETWVKASGILG-GPKNEAPTIISPMQYKKRFRKAMSKYFLTVPD 338 IID++R YTWDK+LE+WVK G++G GP+ PTI++P QYK RFRKAM Y L D Sbjct: 1867 IIDFIRTYTWDKKLESWVKEKGLVGRGPE---PTIVTPKQYKNRFRKAMDCYILASQD 1921
>FYV1_MOUSE (Q9Z1T6) FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68)| (1-phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5-kinase) (PIKfyve) (p235) Length = 2052 Score = 130 bits (326), Expect = 5e-30 Identities = 61/120 (50%), Positives = 87/120 (72%) Frame = -1 Query: 688 LLDSNLIEALHTKPIFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIG 509 LLD NL++ + P+++ S +K L ++ +D FL+S ++DYSLLVG D+ ELV+G Sbjct: 1928 LLDENLLKMVRDNPLYIRSHSKSELRTSIHSDAHFLSSHLIIDYSLLVGRDDTSNELVVG 1987 Query: 508 IIDYLRQYTWDKQLETWVKASGILGGPKNEAPTIISPMQYKKRFRKAMSKYFLTVPDQWT 329 IIDY+R +TWDK+LE VK++GILGG + + PT++SP Y+ RF +AM KYFL VPD WT Sbjct: 1988 IIDYIRTFTWDKKLEMVVKSTGILGG-QGKMPTVVSPELYRTRFCEAMDKYFLMVPDHWT 2046
>FYV1_HUMAN (Q9Y2I7) FYVE finger-containing phosphoinositide kinase (EC 2.7.1.68)| (1-phosphatidylinositol-4-phosphate 5-kinase) (Phosphatidylinositol-3-phosphate 5-kinase type III) (PIP5K) (PtdIns(4)P-5-kinase) (PIKfyve) (p235) Length = 2098 Score = 129 bits (324), Expect = 8e-30 Identities = 61/120 (50%), Positives = 88/120 (73%) Frame = -1 Query: 688 LLDSNLIEALHTKPIFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIG 509 LLD NL++ + P+++ S +K L ++ +D+ FL+S ++DYSLLVG D+ ELV+G Sbjct: 1974 LLDENLLKMVRDNPLYIRSHSKAVLRTSIHSDSHFLSSHLIIDYSLLVGRDDTSNELVVG 2033 Query: 508 IIDYLRQYTWDKQLETWVKASGILGGPKNEAPTIISPMQYKKRFRKAMSKYFLTVPDQWT 329 IIDY+R +TWDK+LE VK++GILGG + + PT++SP Y+ RF +AM KYFL VPD WT Sbjct: 2034 IIDYIRTFTWDKKLEMVVKSTGILGG-QGKMPTVVSPELYRTRFCEAMDKYFLMVPDHWT 2092
>FYV1_DROME (O96838) Putative FYVE finger-containing phosphoinositide kinase (EC| 2.7.1.68) (1-phosphatidylinositol-4-phosphate 5-kinase) (PIP5K) (PtdIns(4)P-5-kinase) Length = 1809 Score = 126 bits (316), Expect = 7e-29 Identities = 62/119 (52%), Positives = 88/119 (73%) Frame = -1 Query: 688 LLDSNLIEALHTKPIFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIG 509 LLD NL++ +KP+++ S +K L A+ D+SFL VMDYSLLVG+D+ LV+G Sbjct: 1686 LLDENLVQMSWSKPLYVLSHSKTVLRDAIQRDSSFLEKNLVMDYSLLVGLDKKNGVLVLG 1745 Query: 508 IIDYLRQYTWDKQLETWVKASGILGGPKNEAPTIISPMQYKKRFRKAMSKYFLTVPDQW 332 IIDY+R +T DK++E+ +K SGILGG K + PT+++P +YK+RF AM +YFLTVPD+W Sbjct: 1746 IIDYIRTFTLDKRVESIIKGSGILGG-KGKDPTVVNPERYKQRFIDAMDRYFLTVPDRW 1803
>PI52B_MOUSE (Q80XI4) Phosphatidylinositol-4-phosphate 5-kinase type-2 beta (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II beta) (1-phosphatidylinositol-4-phosphate 5-kinase 2-beta) (PtdIns(4)P-5-kinase isoform 2-beta) (PIP5KII-beta) (Di Length = 416 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGI-DEDKKE 521 + +G +K+ + D FLA +MDYSLLVGI D D+ E Sbjct: 250 LHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAE 292
>PI52B_HUMAN (P78356) Phosphatidylinositol-4-phosphate 5-kinase type-2 beta (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II beta) (1-phosphatidylinositol-4-phosphate 5-kinase 2-beta) (PtdIns(4)P-5-kinase isoform 2-beta) (PIP5KII-beta) (Di Length = 416 Score = 35.0 bits (79), Expect = 0.21 Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGI-DEDKKE 521 + +G +K+ + D FLA +MDYSLLVGI D D+ E Sbjct: 250 LHVGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAE 292
>PI52B_RAT (O88377) Phosphatidylinositol-4-phosphate 5-kinase type-2 beta (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II beta) (1-phosphatidylinositol-4-phosphate 5-kinase 2-beta) (PtdIns(4)P-5-kinase isoform 2-beta) (PIP5KII-beta) (Diph Length = 416 Score = 34.7 bits (78), Expect = 0.28 Identities = 18/41 (43%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = -1 Query: 640 LGSRAKRRLERAVWNDTSFLASADVMDYSLLVGI-DEDKKE 521 +G +K+ + D FLA +MDYSLLVGI D D+ E Sbjct: 252 VGEESKKNFLEKLKRDVEFLAQLKIMDYSLLVGIHDVDRAE 292
>AFAD_RAT (O35889) Afadin (Af-6 protein)| Length = 1829 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 Query: 420 KPPPLYPRCSTKRGSGRPCPSTSSPSLINGPLNNYS*RLTRSPEALW 280 +P P+ R S +RGSG+P P + L N N S SP+ W Sbjct: 1112 QPSPMMQRISDRRGSGKPRPKSEGFELYNNSAQNGS---PESPQMPW 1155
>AFAD_HUMAN (P55196) Afadin (AF-6 protein)| Length = 1816 Score = 32.7 bits (73), Expect = 1.1 Identities = 17/47 (36%), Positives = 23/47 (48%) Frame = -2 Query: 420 KPPPLYPRCSTKRGSGRPCPSTSSPSLINGPLNNYS*RLTRSPEALW 280 +P P+ R S +RGSG+P P + L N N S SP+ W Sbjct: 1088 QPSPMMQRISDRRGSGKPRPKSEGFELYNNSTQNGS---PESPQLPW 1131
>OTC1_PSESH (Q02047) Ornithine carbamoyltransferase 1, phaseolotoxin-sensitive| (EC 2.1.3.3) (OTCase 1) (SOCT) Length = 305 Score = 32.0 bits (71), Expect = 1.8 Identities = 15/44 (34%), Positives = 21/44 (47%) Frame = -3 Query: 584 SCVSGCHGLLTSCWNRRGQERTRHRHHRLLAPIHLGQTARDLGE 453 + V+G H + T W GQE R L AP + + + DL E Sbjct: 207 AAVAGAHLVSTDVWTSMGQEEETARRMALFAPFQVTRASLDLAE 250
>PI52A_PIG (O13010) Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II alpha) (1-phosphatidylinositol-4-phosphate 5-kinase 2-alpha) (PtdIns(4)P-5-kinase isoform 2-alpha) (PIP5KII-alpha) Length = 406 Score = 31.6 bits (70), Expect = 2.4 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDE 533 I++ K+ + D FLA +MDYSLLVGI + Sbjct: 245 IYIDDNXKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHD 282
>PKN1_CHLCV (Q822R1) Serine/threonine-protein kinase pkn1 (EC 2.7.11.1)| Length = 618 Score = 31.6 bits (70), Expect = 2.4 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 1/69 (1%) Frame = +2 Query: 320 LLRGPLI-RDGEEVLGHGLPEPLFVLHRGYNGGGFILGASQDARGLHPSLELFVPGVLAQ 496 L+R P++ R EE P+PLF GG F+ G+ + R HP E+F+ Sbjct: 358 LIREPVVSRYVEEEKEEVKPQPLFTEMVFIEGGKFLRGSREGQRDEHPVHEIFLHSFFLD 417 Query: 497 VIDDADDEF 523 + +++F Sbjct: 418 IHPVTNEQF 426
>PI5K5_ARATH (Q9SLG9) Phosphatidylinositol-4-phosphate 5-kinase 5 (EC 2.7.1.68)| (AtPIP5K5) (1-phosphatidylinositol-4-phosphate kinase 5) (PtdIns(4)P-5-kinase 5) (Diphosphoinositide kinase 5) Length = 772 Score = 31.2 bits (69), Expect = 3.1 Identities = 20/56 (35%), Positives = 30/56 (53%) Frame = -1 Query: 520 LVIGIIDYLRQYTWDKQLETWVKASGILGGPKNEAPTIISPMQYKKRFRKAMSKYF 353 ++ GIID L+ Y K+LE K+ I P + + + P QY +RFR + K F Sbjct: 717 MIFGIIDILQDYDISKKLEHAYKS--IQYDPSSISA--VDPRQYSRRFRDFIFKVF 768
>PI52A_CHICK (Q5F356) Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II alpha) (1-phosphatidylinositol-4-phosphate 5-kinase 2-alpha) (PtdIns(4)P-5-kinase isoform 2-alpha) (PIP5KII-alpha Length = 405 Score = 31.2 bits (69), Expect = 3.1 Identities = 16/38 (42%), Positives = 20/38 (52%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDE 533 I + KR + D FLA +MDYSLLVGI + Sbjct: 244 IHIDENNKRMFLEKLKKDVEFLAQLKLMDYSLLVGIHD 281
>BES1_CAEEL (Q21973) Bestrophin-1| Length = 525 Score = 30.8 bits (68), Expect = 4.1 Identities = 18/45 (40%), Positives = 31/45 (68%), Gaps = 3/45 (6%) Frame = +3 Query: 75 YLPLHYMITFFVTMLVTMYND-HASYLWLD-TAISMLG-IQGEGD 200 ++PL +M+ FFVT++V +ND A+ W++ TAI++ I+G D Sbjct: 77 FIPLTFMLGFFVTIIVRRWNDIFANLGWVENTAITVANYIRGTDD 121
>PI52A_HUMAN (P48426) Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II alpha) (1-phosphatidylinositol-4-phosphate 5-kinase 2-alpha) (PtdIns(4)P-5-kinase isoform 2-alpha) (PIP5KII-alpha Length = 406 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDE 533 I++ K+ + D FLA +MDYSLLVGI + Sbjct: 245 IYIDDNNKKVFLEKLKKDVEFLAQLKLMDYSLLVGIHD 282
>CAC1I_RAT (Q9Z0Y8) Voltage-dependent T-type calcium channel alpha-1I subunit| (Voltage-gated calcium channel alpha subunit Cav3.3) (CaVT.3) Length = 2201 Score = 30.8 bits (68), Expect = 4.1 Identities = 20/59 (33%), Positives = 26/59 (44%) Frame = -2 Query: 537 TRTRKNSSSASSITCANTPGTNSSRLG*RPLASWEAPRMKPPPLYPRCSTKRGSGRPCP 361 T RK +S++S PG+ S G SW A R K PP + + GS P P Sbjct: 2127 TPARKFNSTSSLAAGPGRPGSTVSARGLVRSPSWAADRSKDPPGQAQLVSGLGSSAPGP 2185
>PI52A_MOUSE (O70172) Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II alpha) (1-phosphatidylinositol-4-phosphate 5-kinase 2-alpha) (PtdIns(4)P-5-kinase isoform 2-alpha) (PIP5KII-alpha Length = 405 Score = 30.8 bits (68), Expect = 4.1 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDE 533 I++ K+ + D FLA +MDYSLLVGI + Sbjct: 245 IYIDDNNKKIFLEKLKKDVEFLAQLKLMDYSLLVGIHD 282
>MDTF_ECOLI (P37637) Multidrug resistance protein mdtF| Length = 1037 Score = 30.4 bits (67), Expect = 5.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 136 ITPPIFGWTLQLACLVSRERVILSMPTAQLPQL 234 I P+F W L + +++ I+++P AQ PQ+ Sbjct: 6 IDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQI 38
>MDTF_ECOL6 (Q8FCI8) Multidrug resistance protein mdtF| Length = 1037 Score = 30.4 bits (67), Expect = 5.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 136 ITPPIFGWTLQLACLVSRERVILSMPTAQLPQL 234 I P+F W L + +++ I+++P AQ PQ+ Sbjct: 6 IDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQI 38
>MDTF_ECO57 (Q8X3J5) Multidrug resistance protein mdtF| Length = 1037 Score = 30.4 bits (67), Expect = 5.3 Identities = 11/33 (33%), Positives = 20/33 (60%) Frame = +1 Query: 136 ITPPIFGWTLQLACLVSRERVILSMPTAQLPQL 234 I P+F W L + +++ I+++P AQ PQ+ Sbjct: 6 IDRPVFAWVLAIIMMLAGGLAIMNLPVAQYPQI 38
>PI52A_RAT (Q9R0I8) Phosphatidylinositol-4-phosphate 5-kinase type-2 alpha (EC| 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II alpha) (1-phosphatidylinositol-4-phosphate 5-kinase 2-alpha) (PtdIns(4)P-5-kinase isoform 2-alpha) (PIP5KII-alpha) Length = 406 Score = 30.4 bits (67), Expect = 5.3 Identities = 15/38 (39%), Positives = 21/38 (55%) Frame = -1 Query: 646 IFLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGIDE 533 I++ K+ + D FLA +MDYSLLVGI + Sbjct: 245 IYIDDSNKKIFLEKLKKDVEFLAQLKLMDYSLLVGIHD 282
>OTC_PSESM (Q87XL4) Ornithine carbamoyltransferase (EC 2.1.3.3) (OTCase)| Length = 305 Score = 30.4 bits (67), Expect = 5.3 Identities = 14/44 (31%), Positives = 20/44 (45%) Frame = -3 Query: 584 SCVSGCHGLLTSCWNRRGQERTRHRHHRLLAPIHLGQTARDLGE 453 + V+G H + T W GQE R L AP + + DL + Sbjct: 207 AAVAGAHLVSTDVWTSMGQEEETARRKALFAPFQVTRALLDLAD 250
>MLL2_HUMAN (O14686) Myeloid/lymphoid or mixed-lineage leukemia protein 2| (ALL1-related protein) Length = 5262 Score = 30.4 bits (67), Expect = 5.3 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 2/49 (4%) Frame = -2 Query: 486 TPGTNSSRLG*RP--LASWEAPRMKPPPLYPRCSTKRGSGRPCPSTSSP 346 TPG+ +S L P L E + P +YP C G G PC P Sbjct: 865 TPGSLASELKGSPVLLDPEELAPVTPMEVYPECKQTAGRGSPCEEQEEP 913
>Y1411_PYRKO (Q5JH13) UPF0292 protein TK1411| Length = 133 Score = 29.6 bits (65), Expect = 9.0 Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%) Frame = -1 Query: 640 LGSRAKR-RLERAVWNDTSFLASADVMDYSLLVGIDEDKKELVIGIIDYLRQYTWDKQLE 464 LG RA+ RL R ++ + +AS+ + +L D+ +EL +++YL Y +E Sbjct: 37 LGVRAEIIRLSRLPLSEVALIASSH-KEVMILTDFDKKGEELAKKLLNYLAGYPCSVDIE 95 Query: 463 TW 458 TW Sbjct: 96 TW 97
>PI5K7_ARATH (Q9SUI2) Phosphatidylinositol-4-phosphate 5-kinase 7 (EC 2.7.1.68)| (AtPIP5K7) (1-phosphatidylinositol-4-phosphate kinase 7) (PtdIns(4)P-5-kinase 7) (Diphosphoinositide kinase 7) (AtP5K2) Length = 754 Score = 29.6 bits (65), Expect = 9.0 Identities = 12/29 (41%), Positives = 21/29 (72%) Frame = -1 Query: 625 KRRLERAVWNDTSFLASADVMDYSLLVGI 539 + L + ++ D SFL S +++DYSLL+G+ Sbjct: 550 REALFKQIYLDCSFLESLNIIDYSLLLGL 578
>MSXA_BRARE (Q03357) Homeobox protein MSH-A| Length = 257 Score = 29.6 bits (65), Expect = 9.0 Identities = 13/62 (20%), Positives = 33/62 (53%) Frame = -1 Query: 541 IDEDKKELVIGIIDYLRQYTWDKQLETWVKASGILGGPKNEAPTIISPMQYKKRFRKAMS 362 I++D + + +D++++ K+ W+ + P++++PT I P++ K RK + Sbjct: 69 INQDDRSIYSDSVDFIKRRESAKEDSAWINKPRLSTSPRSQSPT-ICPLRKHKTNRKPRT 127 Query: 361 KY 356 + Sbjct: 128 PF 129
>PI5K9_ARATH (Q8L850) Phosphatidylinositol-4-phosphate 5-kinase 9 (EC 2.7.1.68)| (AtPIP5K9) (1-phosphatidylinositol-4-phosphate kinase 9) (PtdIns(4)P-5-kinase 9) (Diphosphoinositide kinase 9) Length = 815 Score = 29.6 bits (65), Expect = 9.0 Identities = 14/35 (40%), Positives = 23/35 (65%) Frame = -1 Query: 643 FLGSRAKRRLERAVWNDTSFLASADVMDYSLLVGI 539 FL + + L R + D+ FL + ++MDYSLL+G+ Sbjct: 606 FLETSWREGLLRQLEIDSKFLEAQNIMDYSLLLGV 640 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 104,700,020 Number of Sequences: 219361 Number of extensions: 2352898 Number of successful extensions: 7135 Number of sequences better than 10.0: 29 Number of HSP's better than 10.0 without gapping: 6778 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7116 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6825954960 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
