ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags22e14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 2e-48
2dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 2e-48
3dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mR... 200 2e-48
4ref|XM_476072.1| Oryza sativa (japonica cultivar-group), predic... 147 2e-32
5gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence 125 8e-26
6gb|AY110243.1| Zea mays CL2786_1 mRNA sequence 125 8e-26
7gb|AY105052.1| Zea mays PCO138078 mRNA sequence 125 8e-26
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 96 7e-17
9gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 96 7e-17
10gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-7... 44 0.24
11emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in l... 44 0.24
12emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in l... 44 0.24
13emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 42 0.95
14gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-... 40 3.8
15gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric re... 40 3.8
16gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome... 40 3.8
17gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome... 40 3.8
18gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome... 40 3.8
19emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 ... 40 3.8
20gb|CP000001.1| Bacillus cereus E33L, complete genome 40 3.8
21gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswel... 40 3.8
22gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswel... 40 3.8
23ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA 40 3.8
24gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, r... 40 3.8
25emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF,... 40 3.8
26gb|AY104327.1| Zea mays PCO078604 mRNA sequence 40 3.8
27emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in ... 40 3.8
28gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 ... 40 3.8
29gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60... 40 3.8
30gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 ... 40 3.8
31gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, r... 40 3.8
32gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138... 40 3.8
33gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complet... 40 3.8
34gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, com... 40 3.8

>dbj|AK103126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119N09, full
            insert sequence
          Length = 1195

 Score =  200 bits (101), Expect = 2e-48
 Identities = 197/229 (86%)
 Strand = Plus / Minus

                                                                        
Query: 59   tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 118
            ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 1067 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 1008

                                                                        
Query: 119  cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 178
            |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 1007 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 948

                                                                        
Query: 179  tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 238
            ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 947  tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 888

                                                             
Query: 239  agtactctgtattccccttggttatcacacaaacatccacgttgctgcc 287
            |||||||||| ||||||||||| || || ||||||||||| ||||||||
Sbjct: 887  agtactctgtcttccccttggtgattacgcaaacatccacattgctgcc 839



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>dbj|AK058440.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-F11, full
           insert sequence
          Length = 750

 Score =  200 bits (101), Expect = 2e-48
 Identities = 197/229 (86%)
 Strand = Plus / Minus

                                                                       
Query: 59  tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 118
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 634 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 575

                                                                       
Query: 119 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 178
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 574 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 515

                                                                       
Query: 179 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 238
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 514 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 455

                                                            
Query: 239 agtactctgtattccccttggttatcacacaaacatccacgttgctgcc 287
           |||||||||| ||||||||||| || || ||||||||||| ||||||||
Sbjct: 454 agtactctgtcttccccttggtgattacgcaaacatccacattgctgcc 406



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>dbj|AB026564.1| Oryza sativa (japonica cultivar-group) OsPBB1 mRNA for beta 2
           subunit of 20S proteasome, complete cds
          Length = 1122

 Score =  200 bits (101), Expect = 2e-48
 Identities = 197/229 (86%)
 Strand = Plus / Minus

                                                                       
Query: 59  tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 118
           ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 960 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 901

                                                                       
Query: 119 cctctggcttcagcttcagctgcgtgatctttgtagacaatacctcggtatgccccttgt 178
           |||||  |||| ||||||| || || |||||||| ||||| ||| | || ||||||||| 
Sbjct: 900 cctctaccttcggcttcagttgtgttatctttgtggacaacaccacagtctgccccttgg 841

                                                                       
Query: 179 tgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcgtggtttctca 238
           ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |||||||||||
Sbjct: 840 tgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactggtggtttctca 781

                                                            
Query: 239 agtactctgtattccccttggttatcacacaaacatccacgttgctgcc 287
           |||||||||| ||||||||||| || || ||||||||||| ||||||||
Sbjct: 780 agtactctgtcttccccttggtgattacgcaaacatccacattgctgcc 732



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>ref|XM_476072.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  147 bits (74), Expect = 2e-32
 Identities = 167/198 (84%)
 Strand = Plus / Minus

                                                                       
Query: 90  tcactcttccattgcatcaccatcagctacctctggcttcagcttcagctgcgtgatctt 149
           |||||| |||||||||||||| || |  ||||||  |||| ||||||| || || |||||
Sbjct: 819 tcactcctccattgcatcaccctctgtcacctctaccttcggcttcagttgtgttatctt 760

                                                                       
Query: 150 tgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactgacaaaagt 209
           ||| ||||| ||| | || ||||||||| ||||| |||| ||||| ||||| ||  ||||
Sbjct: 759 tgtggacaacaccacagtctgccccttggtgaagttgtaccccttcgaactaacgtaagt 700

                                                                       
Query: 210 cctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggttatcacaca 269
           ||| || |||||||||| ||||||||||||||||||||| ||||||||||| || || ||
Sbjct: 699 ccttggatttggtaactggtggtttctcaagtactctgtcttccccttggtgattacgca 640

                             
Query: 270 aacatccacgttgctgcc 287
           ||||||||| ||||||||
Sbjct: 639 aacatccacattgctgcc 622



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>gb|BT017621.1| Zea mays clone EL01N0435E12.c mRNA sequence
          Length = 1144

 Score =  125 bits (63), Expect = 8e-26
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 142 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 201
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 866 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 807

                                                                       
Query: 202 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 261
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 806 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 747

                                  
Query: 262 atcacacaaacatccacgttgct 284
           ||||| || || |||||||||||
Sbjct: 746 atcacgcagacgtccacgttgct 724



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>gb|AY110243.1| Zea mays CL2786_1 mRNA sequence
          Length = 1029

 Score =  125 bits (63), Expect = 8e-26
 Identities = 123/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 142 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 201
           ||||||||||  ||||| ||||| || ||||||||| ||||||| |||||||||||||| 
Sbjct: 467 gtgatctttgcggacaacacctcagtctgccccttggtgaagctatatccctttgaacta 526

                                                                       
Query: 202 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 261
           ||| |||| || || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 527 acataagttctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 586

                                  
Query: 262 atcacacaaacatccacgttgct 284
           ||||| || |||||||| |||||
Sbjct: 587 atcacgcagacatccacattgct 609



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>gb|AY105052.1| Zea mays PCO138078 mRNA sequence
          Length = 1368

 Score =  125 bits (63), Expect = 8e-26
 Identities = 123/143 (86%)
 Strand = Plus / Minus

                                                                       
Query: 142 gtgatctttgtagacaatacctcggtatgccccttgttgaagctgtatccctttgaactg 201
           |||| ||||| ||||| |||||| || ||||||||| |||| ||||||||||||||||| 
Sbjct: 960 gtgacctttgaagacagtacctcagtctgccccttggtgaaactgtatccctttgaacta 901

                                                                       
Query: 202 acaaaagtcctcgggtttggtaactcgtggtttctcaagtactctgtattccccttggtt 261
            || ||||||| || || || |||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 900 gcataagtcctgggattcggcaactggtggtttctcaagtattctgtcttccccttggtt 841

                                  
Query: 262 atcacacaaacatccacgttgct 284
           ||||| || || |||||||||||
Sbjct: 840 atcacgcagacgtccacgttgct 818



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                           
Query: 59      tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 118
               ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 5280342 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 5280283

                                                       
Query: 119     cctctggcttcagcttcagctgcgtgatctttgtagacaa 158
               |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 5280282 cctctaccttcggcttcagttgtgttatctttgtggacaa 5280243



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                           
Query: 169     tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 228
               ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 5280147 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 5280088

                                           
Query: 229     tggtttctcaagtactctgtattcccct 256
               |||||||||||||||||||| |||||||
Sbjct: 5280087 tggtttctcaagtactctgtcttcccct 5280060



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>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score = 95.6 bits (48), Expect = 7e-17
 Identities = 87/100 (87%)
 Strand = Plus / Minus

                                                                         
Query: 59    tgactgcttgtctgaatgtaagcacacaagatcactcttccattgcatcaccatcagcta 118
             ||||||||||||||||||||||||||||| ||||||| |||||||||||||| || |  |
Sbjct: 17043 tgactgcttgtctgaatgtaagcacacaaaatcactcctccattgcatcaccctctgtca 16984

                                                     
Query: 119   cctctggcttcagcttcagctgcgtgatctttgtagacaa 158
             |||||  |||| ||||||| || || |||||||| |||||
Sbjct: 16983 cctctaccttcggcttcagttgtgttatctttgtggacaa 16944



 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 77/88 (87%)
 Strand = Plus / Minus

                                                                         
Query: 169   tgccccttgttgaagctgtatccctttgaactgacaaaagtcctcgggtttggtaactcg 228
             ||||||||| ||||| |||| ||||| ||||| ||  ||||||| || |||||||||| |
Sbjct: 16848 tgccccttggtgaagttgtaccccttcgaactaacgtaagtccttggatttggtaactgg 16789

                                         
Query: 229   tggtttctcaagtactctgtattcccct 256
             |||||||||||||||||||| |||||||
Sbjct: 16788 tggtttctcaagtactctgtcttcccct 16761



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>gb|AC150800.3| Medicago truncatula chromosome 7 BAC clone mth2-77m9, complete sequence
          Length = 116865

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 254    ccttggttatcacacaaacatc 275
              ||||||||||||||||||||||
Sbjct: 106030 ccttggttatcacacaaacatc 106051



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>emb|BX890627.4| Zebrafish DNA sequence from clone DKEY-21E7 in linkage group 22,
             complete sequence
          Length = 57918

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 18    aagcactgagaaaaaagaagaaatgg 43
             ||||||||| ||||||||||||||||
Sbjct: 33366 aagcactgaaaaaaaagaagaaatgg 33341



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>emb|BX248416.3| Zebrafish DNA sequence from clone DKEY-75L1 in linkage group 22, complete
              sequence
          Length = 155796

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 18     aagcactgagaaaaaagaagaaatgg 43
              ||||||||| ||||||||||||||||
Sbjct: 107650 aagcactgaaaaaaaagaagaaatgg 107675



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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 170     gccccttgttgaagctgtatc 190
               |||||||||||||||||||||
Sbjct: 2497372 gccccttgttgaagctgtatc 2497392



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>gb|AE017355.1| Bacillus thuringiensis serovar konkukian str. 97-27, complete genome
          Length = 5237682

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      agaaatggcgcaaattctta 55
               ||||||||||||||||||||
Sbjct: 1001598 agaaatggcgcaaattctta 1001617



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>gb|AY642984.1| Tripsacum dactyloides clone CentT9 centromeric repeat sequence
          Length = 157

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 24  tgagaaaaaagaagaaatgg 43
           ||||||||||||||||||||
Sbjct: 148 tgagaaaaaagaagaaatgg 129



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>gb|AC147502.2| Mus musculus BAC clone RP23-111N9 from chromosome 7, complete sequence
          Length = 202934

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    catcagctacctctggcttcagct 133
              ||||||||||||||||| ||||||
Sbjct: 123045 catcagctacctctggcatcagct 123068



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>gb|AC133177.3| Mus musculus BAC clone RP24-116D7 from chromosome 18, complete sequence
          Length = 185838

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    ctagaacaagcactgagaaa 30
             ||||||||||||||||||||
Sbjct: 13938 ctagaacaagcactgagaaa 13919



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>gb|AC140352.3| Mus musculus BAC clone RP23-223L7 from chromosome 18, complete sequence
          Length = 165504

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 11     ctagaacaagcactgagaaa 30
              ||||||||||||||||||||
Sbjct: 150305 ctagaacaagcactgagaaa 150286



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>emb|BX936408.10| Zebrafish DNA sequence from clone CH211-195A15 in linkage group 17,
             complete sequence
          Length = 198387

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 21    cactgagaaaaaagaagaaatggc 44
             |||||||||| |||||||||||||
Sbjct: 49849 cactgagaaataagaagaaatggc 49826



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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 36      agaaatggcgcaaattctta 55
               ||||||||||||||||||||
Sbjct: 1134799 agaaatggcgcaaattctta 1134818



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>gb|AC010070.8| Drosophila melanogaster 3L BAC RP98-18E21 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 171622

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 122   ctggcttcagcttcagctgc 141
             ||||||||||||||||||||
Sbjct: 96939 ctggcttcagcttcagctgc 96958



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>gb|AC010118.8| Drosophila melanogaster 3L BAC RP98-10D15 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 171868

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 124    ggcttcagcttcagctgcgt 143
              ||||||||||||||||||||
Sbjct: 145850 ggcttcagcttcagctgcgt 145831



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>ref|NM_139415.1| Drosophila melanogaster CG13924-RA (CG13924), mRNA
          Length = 1485

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 124 ggcttcagcttcagctgcgt 143
           ||||||||||||||||||||
Sbjct: 290 ggcttcagcttcagctgcgt 271



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>gb|AC092235.1|AC092235 Drosophila melanogaster, chromosome 2L, region 21E-21F, BAC clone
             BACR30G21, complete sequence
          Length = 168370

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctctggcttcagcttcagct 139
             ||||||||||||||||||||
Sbjct: 36068 ctctggcttcagcttcagct 36049



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>emb|Y08571.1|NVY08571 N.vacuolatum gvpA, gvpC, gvpN, gvpO, gvpF, gvpG and gvpH genes
          Length = 5110

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 24  tgagaaaaaagaagaaatgg 43
           ||||||||||||||||||||
Sbjct: 439 tgagaaaaaagaagaaatgg 458



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>gb|AY104327.1| Zea mays PCO078604 mRNA sequence
          Length = 1960

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 97   tccattgcatcaccatcagc 116
            ||||||||||||||||||||
Sbjct: 1469 tccattgcatcaccatcagc 1450



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>emb|BX936463.13| Zebrafish DNA sequence from clone DKEY-4G17 in linkage group 17, complete
              sequence
          Length = 232846

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 21     cactgagaaaaaagaagaaatggc 44
              |||||||||| |||||||||||||
Sbjct: 152867 cactgagaaataagaagaaatggc 152890



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>gb|AE003588.3| Drosophila melanogaster chromosome 2L, section 3 of 83 of the complete
             sequence
          Length = 308447

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctctggcttcagcttcagct 139
             ||||||||||||||||||||
Sbjct: 73191 ctctggcttcagcttcagct 73172



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>gb|AE003525.4| Drosophila melanogaster chromosome 3L, section 60 of 83 of the complete
              sequence
          Length = 196398

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 122    ctggcttcagcttcagctgc 141
              ||||||||||||||||||||
Sbjct: 107603 ctggcttcagcttcagctgc 107622



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>gb|AE003473.3| Drosophila melanogaster chromosome 3L, section 7 of 83 of the complete
             sequence
          Length = 315108

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   ggcttcagcttcagctgcgt 143
             ||||||||||||||||||||
Sbjct: 32540 ggcttcagcttcagctgcgt 32521



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>gb|AC004713.1|AC004713 Drosophila melanogaster, chromosome 3L, region 62B8-62B11, P1 clone
            DS04710, complete sequence
          Length = 72327

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 124  ggcttcagcttcagctgcgt 143
            ||||||||||||||||||||
Sbjct: 4064 ggcttcagcttcagctgcgt 4045



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>gb|AC004245.1|AC004245 Drosophila melanogaster (P1 DS03239 (D138)) DNA sequence, complete
             sequence
          Length = 79454

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 120   ctctggcttcagcttcagct 139
             ||||||||||||||||||||
Sbjct: 40545 ctctggcttcagcttcagct 40526



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>gb|AC149060.4| Mus musculus BAC clone RP23-242D8 from 7, complete sequence
          Length = 205543

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 110    catcagctacctctggcttcagct 133
              ||||||||||||||||| ||||||
Sbjct: 183500 catcagctacctctggcatcagct 183523



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>gb|AC116729.14| Mus musculus chromosome 3, clone RP23-346I1, complete sequence
          Length = 224088

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     ctgttctagaacaagcactgagaa 29
             |||||||||||||| |||||||||
Sbjct: 67173 ctgttctagaacaatcactgagaa 67150


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,201,299
Number of Sequences: 3902068
Number of extensions: 3201299
Number of successful extensions: 75887
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 75721
Number of HSP's gapped (non-prelim): 166
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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