ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21p07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clon... 519 e-144
2ref|NM_193577.1| Oryza sativa (japonica cultivar-group), predic... 517 e-143
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
4dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic D... 268 2e-68
5gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence 174 2e-40
6ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protei... 46 0.12
7gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Can... 44 0.48
8dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:R... 44 0.48
9gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence 42 1.9
10gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Can... 42 1.9
11gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Can... 42 1.9
12gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease ... 42 1.9
13ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain ... 40 7.4
14gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 7.4
15gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosom... 40 7.4
16gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, com... 40 7.4
17ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA 40 7.4
18emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in... 40 7.4
19emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 i... 40 7.4
20gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, comple... 40 7.4
21emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in ... 40 7.4
22emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chro... 40 7.4
23emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on ch... 40 7.4
24emb|CR380953.1| Candida glabrata strain CBS138 chromosome G comp... 40 7.4
25emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in... 40 7.4
26emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in... 40 7.4
27emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, co... 40 7.4
28ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC... 40 7.4
29emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on ch... 40 7.4
30emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20,... 40 7.4
31emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in ... 40 7.4
32emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22,... 40 7.4
33emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on ch... 40 7.4
34gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Canc... 40 7.4
35emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in ... 40 7.4
36gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete ... 40 7.4
37emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 i... 40 7.4
38emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 i... 40 7.4
39emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 i... 40 7.4
40emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in... 40 7.4
41emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in... 40 7.4
42gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining prot... 40 7.4
43gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, comple... 40 7.4 
>dbj|AK100223.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023047H21, full
            insert sequence
          Length = 1245

 Score =  519 bits (262), Expect = e-144
 Identities = 393/437 (89%)
 Strand = Plus / Minus

                                                                        
Query: 113  ctctaaaattccagcattcggcccctcaggatagcctccgcctttctgacttccttcact 172
            ||||| || |||||||| ||||| |  ||||||||||| || ||||||||||||| ||||
Sbjct: 1082 ctctagaactccagcatgcggcctcggaggatagcctcagcttttctgacttcctgcact 1023

                                                                        
Query: 173  ggtccaatgatgaataccctatctggaggcccctttgcaccaccgatatggatttcaaca 232
            |||||||||||||||||||| |||||||| |||||||||||||| |||||||||||||||
Sbjct: 1022 ggtccaatgatgaataccctgtctggaggtccctttgcaccaccaatatggatttcaaca 963

                                                                        
Query: 233  ttgcangattctttcacggccattattgacgatccttttctgccaataacgcgtcccatt 292
            ||||| ||| |||||||  |||||||||| |||||||||||||||||||| || ||||||
Sbjct: 962  ttgcaagatgctttcacttccattattgatgatccttttctgccaataacacgccccatt 903

                                                                        
Query: 293  tttccaggaggcacatctaagagcgaaaggatatccacttcaggaacacggacttcagct 352
            || |||||||||||||| ||||  || ||||||||||| |||||||||   || |||| |
Sbjct: 902  ttgccaggaggcacatccaagactgacaggatatccacctcaggaacataaacatcaggt 843

                                                                        
Query: 353  tcaatgtcatcagggacagttggaagaggtggccaatctgcctgctggttgtcatttatg 412
            ||||| |||||||||||||||||||||||||||||||| || | || |||||||||||||
Sbjct: 842  tcaatttcatcagggacagttggaagaggtggccaatccgcatacttgttgtcatttatg 783

                                                                        
Query: 413  caaaagcacctgcagtatagctcacttcgtactgccagacgccatgaggatactttgctt 472
            |||||||||||||||||||||||||| || |||| |||||||||| | ||||||||||||
Sbjct: 782  caaaagcacctgcagtatagctcactgcgaactgacagacgccataaagatactttgctt 723

                                                                        
Query: 473  aacttctccatcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgct 532
            ||||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||
Sbjct: 722  aacttctccatcattttctcatgtatactgagaaggaagcggacatcatctgtggctgct 663

                             
Query: 533  cgtatcatcatttcaga 549
            || ||||||||||||||
Sbjct: 662  cgaatcatcatttcaga 646



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 39   agtaccacatgcatttctgtat 60
            ||||||||||||||||||||||
Sbjct: 1177 agtaccacatgcatttctgtat 1156
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>ref|NM_193577.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score =  517 bits (261), Expect = e-143
 Identities = 386/428 (90%)
 Strand = Plus / Minus

                                                                        
Query: 122  tccagcattcggcccctcaggatagcctccgcctttctgacttccttcactggtccaatg 181
            |||||||| ||||| |  ||||||||||| || ||||||||||||| |||||||||||||
Sbjct: 1202 tccagcatgcggcctcggaggatagcctcagcttttctgacttcctgcactggtccaatg 1143

                                                                        
Query: 182  atgaataccctatctggaggcccctttgcaccaccgatatggatttcaacattgcangat 241
            ||||||||||| |||||||| |||||||||||||| |||||||||||||||||||| |||
Sbjct: 1142 atgaataccctgtctggaggtccctttgcaccaccaatatggatttcaacattgcaagat 1083

                                                                        
Query: 242  tctttcacggccattattgacgatccttttctgccaataacgcgtcccatttttccagga 301
             |||||||  |||||||||| |||||||||||||||||||| || |||||||| ||||||
Sbjct: 1082 gctttcacttccattattgatgatccttttctgccaataacacgccccattttgccagga 1023

                                                                        
Query: 302  ggcacatctaagagcgaaaggatatccacttcaggaacacggacttcagcttcaatgtca 361
            |||||||| ||||  || ||||||||||| |||||||||   || |||| |||||| |||
Sbjct: 1022 ggcacatccaagactgacaggatatccacctcaggaacataaacatcaggttcaatttca 963

                                                                        
Query: 362  tcagggacagttggaagaggtggccaatctgcctgctggttgtcatttatgcaaaagcac 421
            ||||||||||||||||||||||||||||| || | || ||||||||||||||||||||||
Sbjct: 962  tcagggacagttggaagaggtggccaatccgcatacttgttgtcatttatgcaaaagcac 903

                                                                        
Query: 422  ctgcagtatagctcacttcgtactgccagacgccatgaggatactttgcttaacttctcc 481
            ||||||||||||||||| || |||| |||||||||| | |||||||||||||||||||||
Sbjct: 902  ctgcagtatagctcactgcgaactgacagacgccataaagatactttgcttaacttctcc 843

                                                                        
Query: 482  atcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgctcgtatcatc 541
            |||||||||||||||||| ||||||||||||| ||||||||||| |||||||| ||||||
Sbjct: 842  atcattttctcatgtatactgagaaggaagcggacatcatctgtggctgctcgaatcatc 783

                    
Query: 542  atttcaga 549
            ||||||||
Sbjct: 782  atttcaga 775
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  268 bits (135), Expect = 2e-68
 Identities = 174/187 (93%)
 Strand = Plus / Plus

                                                                            
Query: 363      cagggacagttggaagaggtggccaatctgcctgctggttgtcatttatgcaaaagcacc 422
                |||||||||||||||||||||||||||| || | || |||||||||||||||||||||||
Sbjct: 21696812 cagggacagttggaagaggtggccaatccgcatacttgttgtcatttatgcaaaagcacc 21696871

                                                                            
Query: 423      tgcagtatagctcacttcgtactgccagacgccatgaggatactttgcttaacttctcca 482
                |||||||||||||||| || |||| |||||||||| | ||||||||||||||||||||||
Sbjct: 21696872 tgcagtatagctcactgcgaactgacagacgccataaagatactttgcttaacttctcca 21696931

                                                                            
Query: 483      tcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgctcgtatcatca 542
                ||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 21696932 tcattttctcatgtatactgagaaggaagcggacatcatctgtggctgctcgaatcatca 21696991

                       
Query: 543      tttcaga 549
                |||||||
Sbjct: 21696992 tttcaga 21696998



 Score =  113 bits (57), Expect = 6e-22
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                            
Query: 233      ttgcangattctttcacggccattattgacgatccttttctgccaataacgcgtcccatt 292
                ||||| ||| |||||||  |||||||||| |||||||||||||||||||| || ||||||
Sbjct: 21696325 ttgcaagatgctttcacttccattattgatgatccttttctgccaataacacgccccatt 21696384

                                                                
Query: 293      tttccaggaggcacatctaagagcgaaaggatatccacttcaggaaca 340
                || |||||||||||||| ||||  || ||||||||||| |||||||||
Sbjct: 21696385 ttgccaggaggcacatccaagactgacaggatatccacctcaggaaca 21696432



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                            
Query: 113      ctctaaaattccagcattcggcccctcaggatagcctccgcctttctgacttccttcact 172
                ||||| || |||||||| ||||| |  ||||||||||| || ||||||||||||| ||||
Sbjct: 21695275 ctctagaactccagcatgcggcctcggaggatagcctcagcttttctgacttcctgcact 21695334

                                  
Query: 173      ggtccaatgatgaatacc 190
                ||||||||||||||||||
Sbjct: 21695335 ggtccaatgatgaatacc 21695352



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                   
Query: 187      taccctatctggaggcccctttgcaccaccgatatggatttcaacattgca 237
                |||||| |||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 21696183 taccctgtctggaggtccctttgcaccaccaatatggatttcaacactgca 21696233



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                      
Query: 39       agtaccacatgcatttctgtat 60
                ||||||||||||||||||||||
Sbjct: 21695180 agtaccacatgcatttctgtat 21695201
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>dbj|AP003141.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0002B05
          Length = 141275

 Score =  268 bits (135), Expect = 2e-68
 Identities = 174/187 (93%)
 Strand = Plus / Plus

                                                                         
Query: 363   cagggacagttggaagaggtggccaatctgcctgctggttgtcatttatgcaaaagcacc 422
             |||||||||||||||||||||||||||| || | || |||||||||||||||||||||||
Sbjct: 48863 cagggacagttggaagaggtggccaatccgcatacttgttgtcatttatgcaaaagcacc 48922

                                                                         
Query: 423   tgcagtatagctcacttcgtactgccagacgccatgaggatactttgcttaacttctcca 482
             |||||||||||||||| || |||| |||||||||| | ||||||||||||||||||||||
Sbjct: 48923 tgcagtatagctcactgcgaactgacagacgccataaagatactttgcttaacttctcca 48982

                                                                         
Query: 483   tcattttctcatgtatattgagaaggaagcgcacatcatctgttgctgctcgtatcatca 542
             ||||||||||||||||| ||||||||||||| ||||||||||| |||||||| |||||||
Sbjct: 48983 tcattttctcatgtatactgagaaggaagcggacatcatctgtggctgctcgaatcatca 49042

                    
Query: 543   tttcaga 549
             |||||||
Sbjct: 49043 tttcaga 49049



 Score =  113 bits (57), Expect = 6e-22
 Identities = 95/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 233   ttgcangattctttcacggccattattgacgatccttttctgccaataacgcgtcccatt 292
             ||||| ||| |||||||  |||||||||| |||||||||||||||||||| || ||||||
Sbjct: 48376 ttgcaagatgctttcacttccattattgatgatccttttctgccaataacacgccccatt 48435

                                                             
Query: 293   tttccaggaggcacatctaagagcgaaaggatatccacttcaggaaca 340
             || |||||||||||||| ||||  || ||||||||||| |||||||||
Sbjct: 48436 ttgccaggaggcacatccaagactgacaggatatccacctcaggaaca 48483



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 69/78 (88%)
 Strand = Plus / Plus

                                                                         
Query: 113   ctctaaaattccagcattcggcccctcaggatagcctccgcctttctgacttccttcact 172
             ||||| || |||||||| ||||| |  ||||||||||| || ||||||||||||| ||||
Sbjct: 47326 ctctagaactccagcatgcggcctcggaggatagcctcagcttttctgacttcctgcact 47385

                               
Query: 173   ggtccaatgatgaatacc 190
             ||||||||||||||||||
Sbjct: 47386 ggtccaatgatgaatacc 47403



 Score = 69.9 bits (35), Expect = 8e-09
 Identities = 47/51 (92%)
 Strand = Plus / Plus

                                                                
Query: 187   taccctatctggaggcccctttgcaccaccgatatggatttcaacattgca 237
             |||||| |||||||| |||||||||||||| ||||||||||||||| ||||
Sbjct: 48234 taccctgtctggaggtccctttgcaccaccaatatggatttcaacactgca 48284



 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 39    agtaccacatgcatttctgtat 60
             ||||||||||||||||||||||
Sbjct: 47231 agtaccacatgcatttctgtat 47252
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>gb|BT017548.1| Zea mays clone EL01N0423H02.c mRNA sequence
          Length = 428

 Score =  174 bits (88), Expect = 2e-40
 Identities = 159/183 (86%)
 Strand = Plus / Minus

                                                                       
Query: 112 tctctaaaattccagcattcggcccctcaggatagcctccgcctttctgacttccttcac 171
           |||||| || |||||||||||||| || | ||| ||||| || || |||||||| |||||
Sbjct: 193 tctctagaactccagcattcggcctctgaagatggcctcggctttcctgacttcattcac 134

                                                                       
Query: 172 tggtccaatgatgaataccctatctggaggcccctttgcaccaccgatatggatttcaac 231
           || |||||||||||| |||||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 133 tgatccaatgatgaaaaccctatctggaggccccttagcaccaccaatatggatttcaac 74

                                                                       
Query: 232 attgcangattctttcacggccattattgacgatccttttctgccaataacgcgtcccat 291
            ||||| |||||||||||  ||||||| |  || || |||||||||||||| ||||||||
Sbjct: 73  gttgcaagattctttcacaaccattatagttgacccctttctgccaataactcgtcccat 14

              
Query: 292 ttt 294
           |||
Sbjct: 13  ttt 11
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>ref|XM_741410.1| Aspergillus fumigatus Af293 hypothetical protein (Afu4g03170)
           partial mRNA
          Length = 564

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 266 ccttttctgccaataacgcgtcc 288
           |||||||||||||||||||||||
Sbjct: 139 ccttttctgccaataacgcgtcc 161
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>gb|AC008008.2| Homo sapiens Xp22 PAC RPCI6-102 (Roswell Park Cancer Institute Human
             PAC Library) complete sequence
          Length = 167257

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 485   attttctcatgtatattgagaa 506
             ||||||||||||||||||||||
Sbjct: 59256 attttctcatgtatattgagaa 59235
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>dbj|AP002782.3| Homo sapiens genomic DNA, chromosome 11q clone:RP11-660M18, complete
             sequences
          Length = 153078

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 43    ccacatgcatttctgtattcct 64
             ||||||||||||||||||||||
Sbjct: 24785 ccacatgcatttctgtattcct 24764
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>gb|BT013287.1| Lycopersicon esculentum clone 134897R, mRNA sequence
          Length = 1244

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 ttctgccaataacgcgtcccatttt 294
           ||||||||||||| |||||||||||
Sbjct: 889 ttctgccaataacacgtcccatttt 865
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>gb|AC023050.36| Homo sapiens 12 BAC RP11-428G5 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 186864

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 378    gaggtggccaatctgcctgct 398
              |||||||||||||||||||||
Sbjct: 135064 gaggtggccaatctgcctgct 135044
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>gb|AC126177.8| Homo sapiens 12 BAC RP11-554D14 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 131209

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 356    atgtcatcagggacagttgga 376
              |||||||||||||||||||||
Sbjct: 113158 atgtcatcagggacagttgga 113138
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>gb|DQ284465.1| Solanum tuberosum clone 096G02 3'-5' exonuclease domain-containing
           protein-like mRNA, complete cds
          Length = 1249

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 270 ttctgccaataacgcgtcccatttt 294
           ||||||||||||| |||||||||||
Sbjct: 867 ttctgccaataacacgtcccatttt 843
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>ref|XM_632648.1| Dictyostelium discoideum myosin II heavy chain (DDB0191444), partial
            mRNA
          Length = 6351

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 522  ctgttgctgctcgtatcatc 541
            ||||||||||||||||||||
Sbjct: 2366 ctgttgctgctcgtatcatc 2385
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    tcacggccattattgacgat 265
              ||||||||||||||||||||
Sbjct: 939367 tcacggccattattgacgat 939386
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>gb|AC161587.2| Mus musculus BAC clone RP24-492G17 from chromosome 9, complete sequence
          Length = 176237

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 483   tcattttctcatgtatattgagaa 506
             ||||||||||||||| ||||||||
Sbjct: 27965 tcattttctcatgtaaattgagaa 27942
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>gb|AC136699.23| Mus musculus chromosome 9, clone RP23-18E24, complete sequence
          Length = 229184

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 483    tcattttctcatgtatattgagaa 506
              ||||||||||||||| ||||||||
Sbjct: 186070 tcattttctcatgtaaattgagaa 186047
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>ref|XM_446615.1| Candida glabrata CBS138, CAGL0G05830g partial mRNA
          Length = 2532

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 475  cttctccatcattttctcat 494
            ||||||||||||||||||||
Sbjct: 1905 cttctccatcattttctcat 1886
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>emb|BX005268.26| Zebrafish DNA sequence from clone DKEY-11L22 in linkage group 14,
              complete sequence
          Length = 182719

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 119686 caaaagtcctttctctaaaa 119705
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>emb|BX510909.19| Zebrafish DNA sequence from clone DKEY-195E19 in linkage group 5,
            complete sequence
          Length = 190731

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  caaaagtcctttctctaaaa 120
            ||||||||||||||||||||
Sbjct: 1964 caaaagtcctttctctaaaa 1983
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>gb|AC072054.10| Homo sapiens BAC clone RP11-33P21 from 7, complete sequence
          Length = 154037

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 465    ctttgcttaacttctccatc 484
              ||||||||||||||||||||
Sbjct: 117696 ctttgcttaacttctccatc 117715
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>emb|CR383684.7| Zebrafish DNA sequence from clone DKEYP-69E1 in linkage group 3,
             complete sequence
          Length = 111124

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 208   tgcaccaccgatatggattt 227
             ||||||||||||||||||||
Sbjct: 15731 tgcaccaccgatatggattt 15712
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>emb|AL596179.3| Human DNA sequence from clone RP11-49A12 on chromosome 6, complete
              sequence
          Length = 169159

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 109    ctttctctaaaattccagca 128
              ||||||||||||||||||||
Sbjct: 112313 ctttctctaaaattccagca 112294
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>emb|AL512510.13| Human DNA sequence from clone RP11-537P24 on chromosome 6 Contains a CpG
              island, complete sequence
          Length = 170970

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 45     acatgcatttctgtattccttgtgttca 72
              |||| |||||||||||||| ||||||||
Sbjct: 139743 acattcatttctgtattccctgtgttca 139716
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>emb|CR380953.1| Candida glabrata strain CBS138 chromosome G complete sequence
          Length = 992211

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 475    cttctccatcattttctcat 494
              ||||||||||||||||||||
Sbjct: 562570 cttctccatcattttctcat 562589
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>emb|CR388146.9| Zebrafish DNA sequence from clone DKEY-205F14 in linkage group 5,
             complete sequence
          Length = 19924

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   caaaagtcctttctctaaaa 120
             ||||||||||||||||||||
Sbjct: 19888 caaaagtcctttctctaaaa 19907
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>emb|CR293500.7| Zebrafish DNA sequence from clone DKEY-211I20 in linkage group 18,
              complete sequence
          Length = 164140

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 136757 caaaagtcctttctctaaaa 136776
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>emb|BX511020.10| Zebrafish DNA sequence from clone RP71-9C18, complete sequence
          Length = 160830

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaaagtcctttctctaaaa 120
             ||||||||||||||||||||
Sbjct: 17818 caaaagtcctttctctaaaa 17799
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>ref|XM_698012.1| PREDICTED: Danio rerio hypothetical protein LOC555615 (LOC555615),
           mRNA
          Length = 1101

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 475 cttctccatcattttctcatgtat 498
           ||||||||||||| ||||||||||
Sbjct: 795 cttctccatcattgtctcatgtat 772
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>emb|BX813317.11| Mouse DNA sequence from clone RP24-297H17 on chromosome 2, complete
             sequence
          Length = 157571

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaaagtcctttctctaaaa 120
             ||||||||||||||||||||
Sbjct: 90135 caaaagtcctttctctaaaa 90116
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>emb|AL807749.21| Zebrafish DNA sequence from clone CH211-197F20, complete sequence
          Length = 198777

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 101  caaaagtcctttctctaaaa 120
            ||||||||||||||||||||
Sbjct: 9459 caaaagtcctttctctaaaa 9478
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>emb|BX324003.7| Zebrafish DNA sequence from clone DKEY-81I14 in linkage group 17,
              complete sequence
          Length = 247607

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 151546 caaaagtcctttctctaaaa 151527
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>emb|BX276122.23| Zebrafish DNA sequence from clone CH211-232H22, complete sequence
          Length = 186714

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 182384 caaaagtcctttctctaaaa 182403
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>emb|AL732504.23| Mouse DNA sequence from clone RP23-177I18 on chromosome 4, complete
             sequence
          Length = 192031

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 366   ggacagttggaagaggtggc 385
             ||||||||||||||||||||
Sbjct: 53883 ggacagttggaagaggtggc 53864
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>gb|AC021889.29| Homo sapiens 3 BAC RP11-554F8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 178752

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 59    attccttgtgttcaaaagat 78
             ||||||||||||||||||||
Sbjct: 60006 attccttgtgttcaaaagat 60025
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>emb|BX640584.10| Zebrafish DNA sequence from clone DKEY-78O7 in linkage group 14, complete
              sequence
          Length = 265520

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 103155 caaaagtcctttctctaaaa 103136
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>gb|AC153774.3| Loxodonta africana clone VMRC15-554J14, complete sequence
          Length = 136822

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 346    ttcagcttcaatgtcatcag 365
              ||||||||||||||||||||
Sbjct: 133796 ttcagcttcaatgtcatcag 133815
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>emb|BX649616.5| Zebrafish DNA sequence from clone CH211-165K17 in linkage group 18,
              complete sequence
          Length = 131062

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 117386 caaaagtcctttctctaaaa 117405
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>emb|AL928917.9| Zebrafish DNA sequence from clone CH211-103D12 in linkage group 1,
             complete sequence
          Length = 176961

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 475   cttctccatcattttctcatgtat 498
             ||||||||||||| ||||||||||
Sbjct: 83334 cttctccatcattgtctcatgtat 83311
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>emb|BX510947.20| Zebrafish DNA sequence from clone DKEY-226F16 in linkage group 4,
             complete sequence
          Length = 125275

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaaagtcctttctctaaaa 120
             ||||||||||||||||||||
Sbjct: 21736 caaaagtcctttctctaaaa 21717
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>emb|CR792418.18| Zebrafish DNA sequence from clone DKEY-59L11 in linkage group 4, complete
              sequence
          Length = 263674

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 101    caaaagtcctttctctaaaa 120
              ||||||||||||||||||||
Sbjct: 154217 caaaagtcctttctctaaaa 154236
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>emb|BX649283.16| Zebrafish DNA sequence from clone DKEYP-86C4 in linkage group 14,
             complete sequence
          Length = 193551

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 101   caaaagtcctttctctaaaa 120
             ||||||||||||||||||||
Sbjct: 14342 caaaagtcctttctctaaaa 14323
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>gb|U22443.1|EFU22443 Ellobius fuscocapillus sex-determining protein (Sry) gene, partial
           cds
          Length = 153

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 ccatttttccaggaggcaca 307
           ||||||||||||||||||||
Sbjct: 121 ccatttttccaggaggcaca 140
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>gb|M14628.1|DDIMYHC D.discoideum myosin heavy chain gene, complete cds
          Length = 6681

 Score = 40.1 bits (20), Expect = 7.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 522  ctgttgctgctcgtatcatc 541
            ||||||||||||||||||||
Sbjct: 2435 ctgttgctgctcgtatcatc 2454


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,088,026
Number of Sequences: 3902068
Number of extensions: 5088026
Number of successful extensions: 94574
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94446
Number of HSP's gapped (non-prelim): 128
length of query: 549
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 526
effective length of database: 17,143,297,704
effective search space: 9017374592304
effective search space used: 9017374592304
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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