>IBBWP_MAIZE (P31862) Bowman-Birk type wound-induced proteinase inhibitor WIP1|
           precursor
          Length = 102

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 26/61 (42%), Positives = 29/61 (47%), Gaps = 4/61 (6%)
 Frame = -2

Query: 405 KCCNNCR-SFSGVDVCDDAHPQCPKGCSACRV---VTPSPHKTFRCADMKSTVDGTCGGP 238
           KCC NC  SFSG+  CDD    C   C  C V    + S +  FRC D   T  G CG  
Sbjct: 45  KCCTNCNFSFSGLYTCDDVKKDCDPVCKKCVVAVHASYSGNNKFRCTD---TFLGMCGPK 101

Query: 237 C 235
           C
Sbjct: 102 C 102

>PKSJ_BACSU (P40806) Putative polyketide synthase pksJ (PKS)|
          Length = 5045

 Score = 30.4 bits (67), Expect = 2.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 248  QVPSTVLFMSAQRNVL*GL--GVTTRQAEQPLGHWGWASSQTST 373
            Q+P T +FMSA  N    L    TT   E P G+  W  +Q+ T
Sbjct: 1869 QIPQTSVFMSASNNSYRALLPSDTTESLETPDGYVSWVLAQSGT 1912

>IBB1_ARAHY (P01066) Bowman-Birk type proteinase inhibitor A-II [Contains:|
           Bowman-Birk type proteinase inhibitor A-I; Bowman-Birk
           type proteinase inhibitor B-I; Bowman-Birk type
           proteinase inhibitor B-III]
          Length = 70

 Score = 30.0 bits (66), Expect = 2.8
 Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
 Frame = -2

Query: 402 CCNNCRSFSGVD-----VCDDAHPQCPKGCSACRVVTPSPHKTFRCAD 274
           CCN C            VC D    CP  C++C V T S     RC D
Sbjct: 11  CCNGCLCDRRAPPYFECVCVDTFDHCPASCNSC-VCTRSNPPQCRCTD 57

>DTX3_HUMAN (Q8N9I9) Protein deltex-3 (Deltex-3) (Deltex3)|
          Length = 347

 Score = 29.6 bits (65), Expect = 3.6
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -2

Query: 192 VPPRIKLR*DEQSSCCYVCVWAVLYGQQYVRCLSSLC 82
           +PPR++   +EQ S C +C+  +   +   +C  S C
Sbjct: 149 LPPRLREEAEEQESTCPICLGEIQNAKTLEKCRHSFC 185

>POMT1_DROME (Q9VTK2) Protein O-mannosyltransferase 1 (EC 2.4.1.109)|
           (Dolichyl-phosphate-mannose--protein mannosyltransferase
           1) (dPOMT1) (Protein rotated abdomen)
          Length = 886

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 2/42 (4%)
 Frame = -2

Query: 408 PKCCNNCRSFSGVDVCDD--AHPQCPKGCSACRVVTPSPHKT 289
           P CCN  R+ + ++ C D   H   P   S  R  TP+P  T
Sbjct: 61  PLCCNGARALTMLNCCVDVNCHLNAPLRGSVNRHTTPTPTPT 102

>ARHG6_RAT (Q5XXR3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 772

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
 Frame = +2

Query: 116 PYSTAHTQT*QHDDCSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 268
           P S +         CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 550 PASCSSLSKTSSSSCSTHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 606

>RECQ5_HUMAN (O94762) ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ|
           protein-like 5) (RecQ5)
          Length = 991

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = -2

Query: 390 CRSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTVDGTCGGP 238
           CR  +      DA P C KGC  C+  T +  +     +  S+   TC GP
Sbjct: 411 CRHAAIAKYFGDALPACAKGCDHCQNPT-AVRRRLEALERSSSWSKTCIGP 460

>ARHG6_HUMAN (Q15052) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6) (PAK-interacting
           exchange factor alpha) (Alpha-Pix) (COOL-2)
          Length = 776

 Score = 28.9 bits (63), Expect = 6.2
 Identities = 20/57 (35%), Positives = 22/57 (38%), Gaps = 6/57 (10%)
 Frame = +2

Query: 116 PYSTAHTQT*QHDDCSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 268
           P S +         CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 550 PASCSSLSKTSSSSCSAHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 606

>ARHG6_MOUSE (Q8K4I3) Rho guanine nucleotide exchange factor 6 (Rac/Cdc42|
           guanine nucleotide exchange factor 6)
          Length = 771

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 18/43 (41%), Positives = 19/43 (44%), Gaps = 6/43 (13%)
 Frame = +2

Query: 158 CSSHLSFILGGTPRPSL------KP*SDQCFLHGPPQVPSTVL 268
           CS+H SF   G PR  L      KP S  C    PP  PS  L
Sbjct: 563 CSTHSSFSSTGQPRGPLEPPQIIKPWSLSCLRPAPPLRPSAAL 605

>ZPBP1_HUMAN (Q9BS86) Zona pellucida-binding protein 1 precursor (Sp38)|
          Length = 351

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 12/43 (27%), Positives = 19/43 (44%)
 Frame = -2

Query: 387 RSFSGVDVCDDAHPQCPKGCSACRVVTPSPHKTFRCADMKSTV 259
           R F G  +    HP+CP+ C  C   + +P     C    S++
Sbjct: 301 RCFPGYGMNVQQHPKCPECCVICSPGSYNPRDGIHCLQCNSSL 343

>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/61 (32%), Positives = 25/61 (40%)
 Frame = +2

Query: 65   FSRERKHSDDKQRTYCWPYSTAHTQT*QHDDCSSHLSFILGGTPRPSLKP*SDQCFLHGP 244
            F RER+  DD+ ++Y               D   H S   GG  RPS    SD+    GP
Sbjct: 973  FDRERRPRDDRNQSY--------------RDKKDHSSSRRGGFDRPSYDRKSDRPPYEGP 1018

Query: 245  P 247
            P
Sbjct: 1019 P 1019


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,101,402
Number of Sequences: 219361
Number of extensions: 1023145
Number of successful extensions: 2773
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2676
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2768
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)