| Clone Name | rbags22e02 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MATK_MATIN (Q9GF34) Maturase K (Intron maturase) | 28 | 4.6 | 2 | INVO_PANPA (P14591) Involucrin | 28 | 7.8 | 3 | MPH23_YEAST (P47186) Alpha-glucosides permease MPH2/3 (Maltose t... | 28 | 7.8 | 4 | RIR1_CHLPN (Q9Z6S5) Ribonucleoside-diphosphate reductase alpha s... | 28 | 7.8 | 5 | BPHF_RHOSR (O05151) 4-hydroxy-2-oxovalerate aldolase (EC 4.1.2.-) | 28 | 7.8 |
|---|
>MATK_MATIN (Q9GF34) Maturase K (Intron maturase)| Length = 504 Score = 28.5 bits (62), Expect = 4.6 Identities = 17/36 (47%), Positives = 24/36 (66%), Gaps = 1/36 (2%) Frame = +1 Query: 10 LLYNEITW*TYFYNLYTCIYFNIRF-PTKISVSKLY 114 LL N+ W YF NL+ C YF+I F P K ++++LY Sbjct: 291 LLMNK--WKYYFVNLWQC-YFSIWFQPQKANINQLY 323
>INVO_PANPA (P14591) Involucrin| Length = 560 Score = 27.7 bits (60), Expect = 7.8 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%) Frame = +2 Query: 80 GSLQRLVCQNCTSLRSEGKPEDIARQWDHLFP*SQLVH-NTISTSILQIESAKNQAGLP 253 G L+ LV Q + EG+ E + +Q +HL QL H + +E + Q G+P Sbjct: 371 GQLEHLVQQEGQLEQQEGQVEHLEQQVEHLEQLGQLKHLEEQEGQLKHLEQQQGQLGVP 429
>MPH23_YEAST (P47186) Alpha-glucosides permease MPH2/3 (Maltose transport| protein 2/3) Length = 602 Score = 27.7 bits (60), Expect = 7.8 Identities = 10/21 (47%), Positives = 13/21 (61%) Frame = +1 Query: 211 YPSNRVSQEPSWVTMVDKVKR 273 YP S EPSW+ M D+ K+ Sbjct: 21 YPGKAKSHEPSWIEMDDQTKK 41
>RIR1_CHLPN (Q9Z6S5) Ribonucleoside-diphosphate reductase alpha subunit (EC| 1.17.4.1) (Ribonucleotide reductase) Length = 1044 Score = 27.7 bits (60), Expect = 7.8 Identities = 14/50 (28%), Positives = 25/50 (50%) Frame = +3 Query: 36 DILLQPIYMHIFQHKVPYKD*CVKIVHLYAVKGSQKILLVNGTISSHNHS 185 D+L + + Q V + D C +I+ YA+ S + GT +S++ S Sbjct: 750 DVLYELNISYASQEAVEFSDECSEIIAYYAILASSLLAKERGTYASYSGS 799
>BPHF_RHOSR (O05151) 4-hydroxy-2-oxovalerate aldolase (EC 4.1.2.-)| Length = 258 Score = 27.7 bits (60), Expect = 7.8 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%) Frame = -3 Query: 245 QLGSWLTLFEGYSC*LC----YVLAVIMGRDGPIDEQYLLASLHCVEMY 111 Q+G WL L + YS +C + +I G P D + +LA L + Y Sbjct: 18 QIGFWLALGDAYSAEVCAGAGFDWLLIDGEHAPQDLRSVLAQLQVIGAY 66 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 41,803,980 Number of Sequences: 219361 Number of extensions: 752295 Number of successful extensions: 1541 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1532 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1541 length of database: 80,573,946 effective HSP length: 73 effective length of database: 64,560,593 effective search space used: 1549454232 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)