>KKR1_YEAST (P36003) Probable serine/threonine-protein kinase YKL171W (EC|
           2.7.11.1)
          Length = 928

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 18  AQVSKATCNDTCSTG*VGLNTRHNPRNSSSTIIESRP 128
           A VS+AT ND        +N+R+ P NS+ T + +RP
Sbjct: 367 ASVSQATANDD------NINSRNTPNNSNDTYVNTRP 397

>LRP2_HUMAN (P98164) Low-density lipoprotein receptor-related protein 2 precursor|
            (Megalin) (Glycoprotein 330) (gp330)
          Length = 4655

 Score = 30.0 bits (66), Expect = 3.5
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
 Frame = -1

Query: 473  IWMQRPLLICFITSKE--NTSPRLPLHKNFQLSAQVTEFGKQVQ 348
            IW+ R L   F  SKE  NT P   +  N      VT F KQVQ
Sbjct: 2291 IWVDRNLKKIFQASKEPENTEPPTVIRDNINWLRDVTIFDKQVQ 2334

>YNR0_YEAST (P53888) Hypothetical 14.7 kDa protein in RPS3-PSD1 intergenic|
           region
          Length = 131

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 17/42 (40%), Positives = 22/42 (52%)
 Frame = +2

Query: 218 THNLNLIGKQKP*TRIKLSSGTNGSPVQSAPATKTMPPIVLL 343
           T NLN +G  K  T +      N  P  S+P TK +PP +LL
Sbjct: 87  TSNLNSVGASKQSTTVL----PNSKPPISSPLTKGIPPNILL 124

>TINAL_HUMAN (Q9GZM7) Tubulointerstitial nephritis antigen-like precursor|
           (Tubulointerstitial nephritis antigen-related protein)
           (TIN Ag-related protein) (TIN-Ag-RP)
           (Glucocorticoid-inducible protein 5) (Oxidized
           LDL-responsive gene 2 protein) (OLRG-2)
          Length = 467

 Score = 29.6 bits (65), Expect = 4.6
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = +1

Query: 271 VLWNQWKSSPECTCYENNAPNCALEVCTCLPNSVT*ADS*KFLCKGNLG 417
           VL   W +   CTC EN    C  E C   P+ +      K + +GN G
Sbjct: 114 VLGTYWDNCNRCTCQENRQWQCDQEPCLVDPDMI------KAINQGNYG 156

>UFD1_CAEEL (Q19584) Ubiquitin fusion degradation protein 1 homolog (UB fusion|
           protein 1)
          Length = 342

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = +2

Query: 233 LIGKQKP*TRIKLSSGTNGSPVQSAPATKTMPPI 334
           L GK+KP + + LS GT  S   +AP    +P I
Sbjct: 252 LDGKKKPSSSVSLSDGTGVSTSNAAPVANDLPAI 285

>CHD7_HUMAN (Q9P2D1) Chromodomain-helicase-DNA-binding protein 7 (EC 3.6.1.-)|
            (ATP-dependent helicase CHD7) (CHD-7) (Fragment)
          Length = 2235

 Score = 29.3 bits (64), Expect = 6.0
 Identities = 17/61 (27%), Positives = 28/61 (45%)
 Frame = +2

Query: 215  PTHNLNLIGKQKP*TRIKLSSGTNGSPVQSAPATKTMPPIVLLKSAPAYRIQSPEPTAEN 394
            PT N+   G+  P TRI + +  +G+ +    A K    +  LK  P Y +  P    +N
Sbjct: 1791 PTRNIPSPGQLDPDTRIPVINLEDGTRLVGEDAPKNKDLVEWLKLHPTYTVDMPSYVPKN 1850

Query: 395  S 397
            +
Sbjct: 1851 A 1851


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,086,780
Number of Sequences: 219361
Number of extensions: 1526240
Number of successful extensions: 3688
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3685
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)