ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbags22d20 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY103782.1| Zea mays PCO080860 mRNA sequence Length = 2117 Score = 521 bits (263), Expect = e-145 Identities = 410/459 (89%) Strand = Plus / Minus Query: 162 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 221 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1872 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1813 Query: 222 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 281 ||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 1812 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1753 Query: 282 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 341 ||||||||||||||||||||||||||| || || ||||||||||||| |||||| ||||| Sbjct: 1752 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacaaaggcctg 1693 Query: 342 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 401 ||| |||||||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1692 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1633 Query: 402 cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 461 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1632 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1573 Query: 462 cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 521 ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1572 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1513 Query: 522 cacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgg 581 | ||| ||||| |||||||| || |||| ||| |||||||| ||||||| ||||| || Sbjct: 1512 gatctcaatctgagccatcatcagggcaatgtacactccagcagtgaaggcatggagcgg 1453 Query: 582 gccaaggtcaccatctggccgggtcgagcgcaccttttc 620 |||||| ||||| || || ||||| |||||||||||||| Sbjct: 1452 gccaagatcaccttccggacgggttgagcgcaccttttc 1414
>gb|BT016666.1| Zea mays clone Contig499 mRNA sequence Length = 1992 Score = 513 bits (259), Expect = e-142 Identities = 409/459 (89%) Strand = Plus / Minus Query: 162 aatctaggcagactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagat 221 |||||||| |||||||||||||||||| ||||| ||||| || | ||| | ||| ||||| Sbjct: 1780 aatctaggaagactgccggagctccgggcgcacaaagtcggcgttggcaggcacagagat 1721 Query: 222 gtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacat 281 ||||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||| Sbjct: 1720 gtcgacggtgggcctcagctcggcgcagacctcaatggcaccatggacagggtccgacaa 1661 Query: 282 gaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctg 341 ||||||||||||||||||||||||||| || || ||||||||||||| ||| || ||||| Sbjct: 1660 gaagttgctgatgaggtcctggttgatcggggcgtccttgtccaccgccacgaaggcctg 1601 Query: 342 ctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgt 401 ||| |||||||||||||||||||| |||||||||||||| || ||||| || ||||| || Sbjct: 1600 ctgcgtcaggatgtagtcgaagcgaggcgcccacttcctggatcccaggcgagccgttgt 1541 Query: 402 cgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtc 461 ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||| Sbjct: 1540 ggagcagttgtccaccatgaaggcgaccccacgggcgtgcatgaacgggttcagcgagtc 1481 Query: 462 cactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcag 521 ||| ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 1480 caccgactcaatcacgctctcgttgatgatctcagagtaggagtgccccttcttcctcag 1421 Query: 522 cacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgg 581 | ||| ||||| |||||||| || |||| ||| |||||||| ||||||| ||||| || Sbjct: 1420 gatctcaatctgagccatcatcagggcaatgtacactccagcagtgaaggcatggagcgg 1361 Query: 582 gccaaggtcaccatctggccgggtcgagcgcaccttttc 620 |||||| ||||| || || ||||| |||||||||||||| Sbjct: 1360 gccaagatcaccttccggacgggttgagcgcaccttttc 1322
>dbj|AK061892.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-G05, full insert sequence Length = 1153 Score = 462 bits (233), Expect = e-127 Identities = 395/449 (87%) Strand = Plus / Minus Query: 172 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 231 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 983 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 924 Query: 232 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 291 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 923 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 864 Query: 292 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 351 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 863 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 804 Query: 352 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 411 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 803 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 744 Query: 412 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 471 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 743 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 684 Query: 472 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 531 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 683 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 624 Query: 532 tgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtca 591 || |||||||| ||||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 623 tgagccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaagatcg 564 Query: 592 ccatctggccgggtcgagcgcaccttttc 620 ||||| ||||| || ||||||||||| Sbjct: 563 ttttctggtcgggttgaccgcaccttttc 535
>dbj|AK065295.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002N13, full insert sequence Length = 1983 Score = 462 bits (233), Expect = e-127 Identities = 395/449 (87%) Strand = Plus / Minus Query: 172 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 231 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 1795 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 1736 Query: 232 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 291 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 1735 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 1676 Query: 292 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 351 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 1675 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 1616 Query: 352 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 411 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 1615 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 1556 Query: 412 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 471 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 1555 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 1496 Query: 472 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 531 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 1495 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 1436 Query: 532 tgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtca 591 || |||||||| ||||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 1435 tgagccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaagatcg 1376 Query: 592 ccatctggccgggtcgagcgcaccttttc 620 ||||| ||||| || ||||||||||| Sbjct: 1375 ttttctggtcgggttgaccgcaccttttc 1347
>gb|AC104284.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1735_C10, complete sequence Length = 187034 Score = 406 bits (205), Expect = e-110 Identities = 322/361 (89%) Strand = Plus / Plus Query: 172 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 231 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 143341 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 143400 Query: 232 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 291 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 143401 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 143460 Query: 292 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 351 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 143461 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 143520 Query: 352 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 411 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 143521 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 143580 Query: 412 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 471 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 143581 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 143640 Query: 472 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 531 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 143641 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 143700 Query: 532 t 532 | Sbjct: 143701 t 143701 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcacca 594 |||||||| ||||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 143820 gccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaagatcgttt 143879 Query: 595 tctggccgggtcgagcgcaccttttc 620 ||||| ||||| || ||||||||||| Sbjct: 143880 tctggtcgggttgaccgcaccttttc 143905
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 406 bits (205), Expect = e-110 Identities = 322/361 (89%) Strand = Plus / Plus Query: 172 gactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtg 231 |||||||||||||| || |||||||| || || | ||| | ||| ||||||||||||||| Sbjct: 28359099 gactgccggagctctgggcgcacgaaatcggcgttggcaggcacggagatgtcgacggtg 28359158 Query: 232 ggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctg 291 |||| |||||| ||||| |||||||| ||||| ||||||||||| ||||||||||||||| Sbjct: 28359159 ggccgcagctcagcgcacacctcgattgcgccatggacggggtcggacatgaagttgctg 28359218 Query: 292 atgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcagg 351 |||||||||||||||||||| |||||||||||||| ||||| || || |||||||||||| Sbjct: 28359219 atgaggtcctggttgatgggagcatccttgtccactgtcacgaatgcttgctgggtcagg 28359278 Query: 352 atgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttg 411 |||||||||||||| |||||||| ||||| || ||||| || |||||||| ||||||||| Sbjct: 28359279 atgtagtcgaagcgtggcgcccatttccttgatcccagacgagccgtcgttgagcagttg 28359338 Query: 412 tccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcg 471 || |||||||||||||| ||||| || |||||||| |||||||| |||||||| |||||| Sbjct: 28359339 tcaaccatgaaggccactccacgagcatgcatgaaggggttcagtgagtccacggactcg 28359398 Query: 472 atcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatc 531 || |||||||||||||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 28359399 atgacgctctcgttgatgatctctgagtaggagtgacccttctttctaaggacctcgatc 28359458 Query: 532 t 532 | Sbjct: 28359459 t 28359459 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Plus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcacca 594 |||||||| ||||||||||| |||||||| |||||||| || || |||||||| || Sbjct: 28359578 gccatcatcagtgcaacgtagactccagcagtgaagggatgcagggggccaagatcgttt 28359637 Query: 595 tctggccgggtcgagcgcaccttttc 620 ||||| ||||| || ||||||||||| Sbjct: 28359638 tctggtcgggttgaccgcaccttttc 28359663
>gb|BT009123.1| Triticum aestivum clone wl1n.pk0013.e12:fis, full insert mRNA sequence Length = 1957 Score = 355 bits (179), Expect = 1e-94 Identities = 362/423 (85%) Strand = Plus / Minus Query: 171 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 230 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1766 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1707 Query: 231 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 290 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1706 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1647 Query: 291 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 350 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1646 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1587 Query: 351 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 410 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1586 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1527 Query: 411 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 470 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 1526 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1467 Query: 471 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 530 ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 1466 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1407 Query: 531 ctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtc 590 ||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| || Sbjct: 1406 ctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaagatc 1347 Query: 591 acc 593 ||| Sbjct: 1346 acc 1344
>gb|AY103707.1| Zea mays PCO072121 mRNA sequence Length = 1985 Score = 355 bits (179), Expect = 1e-94 Identities = 362/423 (85%) Strand = Plus / Minus Query: 171 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 230 |||||| || ||||| ||||||||||| |||||||| || ||||| |||||||| || || Sbjct: 1777 agactgtcgaagctctggacgcacgaaatcagcatcagcggtcactgagatgtcaacagt 1718 Query: 231 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 290 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 1717 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 1658 Query: 291 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 350 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 1657 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 1598 Query: 351 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 410 |||||| |||||||| || ||||||||||| || |||| || || || || |||||||| Sbjct: 1597 gatgtaatcgaagcgtggtgcccacttcctagatcccaaacgagcagttgtggagcagtt 1538 Query: 411 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 470 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 1537 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 1478 Query: 471 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 530 ||||| |||||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 1477 gatcaggctctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 1418 Query: 531 ctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtc 590 ||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| || Sbjct: 1417 ctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaagatc 1358 Query: 591 acc 593 ||| Sbjct: 1357 acc 1355
>gb|BT016378.1| Zea mays clone Contig211 mRNA sequence Length = 1029 Score = 323 bits (163), Expect = 4e-85 Identities = 358/423 (84%) Strand = Plus / Minus Query: 171 agactgccggagctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggt 230 |||||| || ||||| || |||||||| ||||||| || ||||| |||||||| || || Sbjct: 817 agactgtcgaagctctgggcgcacgaaatcagcatgagcggtcactgagatgtcaacagt 758 Query: 231 gggcctcagctcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgct 290 ||||||||||| |||||||| |||||||| |||||||| ||||| |||||||||||||| Sbjct: 757 gggcctcagctgagcgcagacttcgatggcaccgtggacagggtcagacatgaagttgct 698 Query: 291 gatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcag 350 ||||||||| |||||||| || || | |||||| || |||||||||||||| ||||||| Sbjct: 697 gatgaggtcttggttgatcggtgctttcttgtcaacagtcacaaacgcctgttgggtcaa 638 Query: 351 gatgtagtcgaagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagtt 410 |||||| |||||||| || ||||| ||||| || |||| || || || || |||||||| Sbjct: 637 gatgtaatcgaagcgtggtgcccatttcctagatcccaaacgagcagttgtggagcagtt 578 Query: 411 gtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactc 470 || |||||||||||||| || || || |||||||||||||||| ||||||||| ||||| Sbjct: 577 atcgaccatgaaggccacaccgcgagcatgcatgaacgggttcaacgagtccacggactc 518 Query: 471 gatcacgctctcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgat 530 ||||| | |||| || || ||||| ||||| ||||| ||||||||||| || ||||| || Sbjct: 517 gatcagggtctcattaattatctctgagtaagagtggcccttcttcctaaggacctcaat 458 Query: 531 ctgggccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtc 590 ||| |||||||| |||||||| || |||||||| |||||||| || ||||||||||| || Sbjct: 457 ctgagccatcattagtgcaacatacactccagcagtgaagggatgcagtgggccaagatc 398 Query: 591 acc 593 ||| Sbjct: 397 acc 395
>ref|NM_192395.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1746 Score = 270 bits (136), Expect = 5e-69 Identities = 364/440 (82%) Strand = Plus / Minus Query: 181 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 240 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1730 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1671 Query: 241 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 300 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1670 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1611 Query: 301 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 360 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1610 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1551 Query: 361 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 420 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1550 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1491 Query: 421 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 480 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 1490 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1431 Query: 481 tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 540 |||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||| Sbjct: 1430 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1371 Query: 541 ataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcaccatctggc 600 ||||||||||| || |||||||| ||||| || || | ||||||||| ||||| ||||| Sbjct: 1370 ataagtgcaacatacactccagcagtgaaaggatgtaatgggccaagatcacctgctggc 1311 Query: 601 cgggtcgagcgcaccttttc 620 || || || |||||| |||| Sbjct: 1310 cgtgttgaccgcaccctttc 1291
>dbj|AK072075.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013115K02, full insert sequence Length = 1917 Score = 270 bits (136), Expect = 5e-69 Identities = 364/440 (82%) Strand = Plus / Minus Query: 181 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 240 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 1681 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 1622 Query: 241 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 300 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 1621 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 1562 Query: 301 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 360 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 1561 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 1502 Query: 361 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 420 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 1501 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 1442 Query: 421 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 480 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 1441 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 1382 Query: 481 tcgttgatgatctcagagtaggagtgacccttcttcctcagcacctcgatctgggccatc 540 |||||||||||||| ||||| ||||| |||||||| || || || || ||||| |||||| Sbjct: 1381 tcgttgatgatctccgagtaagagtggcccttctttctaaggacttcaatctgtgccatc 1322 Query: 541 ataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcaccatctggc 600 ||||||||||| || |||||||| ||||| || || | ||||||||| ||||| ||||| Sbjct: 1321 ataagtgcaacatacactccagcagtgaaaggatgtaatgggccaagatcacctgctggc 1262 Query: 601 cgggtcgagcgcaccttttc 620 || || || |||||| |||| Sbjct: 1261 cgtgttgaccgcaccctttc 1242
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 220 bits (111), Expect = 4e-54 Identities = 279/335 (83%) Strand = Plus / Minus Query: 181 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 240 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 26389122 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 26389063 Query: 241 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 300 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 26389062 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 26389003 Query: 301 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 360 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 26389002 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 26388943 Query: 361 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 420 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 26388942 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 26388883 Query: 421 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 480 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 26388882 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 26388823 Query: 481 tcgttgatgatctcagagtaggagtgacccttctt 515 |||||||||||||| ||||| ||||| |||||||| Sbjct: 26388822 tcgttgatgatctccgagtaagagtggcccttctt 26388788 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcacca 594 ||||||||||||||||| || |||||||| ||||| || || | ||||||||| ||||| Sbjct: 26388671 gccatcataagtgcaacatacactccagcagtgaaaggatgtaatgggccaagatcacct 26388612 Query: 595 tctggccgggtcgagcgcaccttttc 620 ||||||| || || |||||| |||| Sbjct: 26388611 gctggccgtgttgaccgcaccctttc 26388586
>dbj|AP003710.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0032K15 Length = 126195 Score = 220 bits (111), Expect = 4e-54 Identities = 279/335 (83%) Strand = Plus / Minus Query: 181 agctccggacgcacgaagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagc 240 ||||| |||||||| ||||| ||||| || | ||| || ||||| ||||||||||||| | Sbjct: 62987 agctctggacgcacaaagtctgcatcagcaggcactgaaatgtcaacggtgggcctcaac 62928 Query: 241 tcggcgcagacctcgatggcgccgtggacggggtccgacatgaagttgctgatgaggtcc 300 | || ||||| || ||||| | |||||||| || || | ||| |||||||||||||| Sbjct: 62927 tgagcacagacttcaatggcactatggacgggatcggagaagaaattgctgatgaggtct 62868 Query: 301 tggttgatgggcgcatccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcg 360 || || | || |||| |||||| || |||||||| || || ||||||| |||||||||| Sbjct: 62867 tgattaactggagcattcttgtcaacagtcacaaaagcttgttgggtcaagatgtagtcg 62808 Query: 361 aagcggggcgcccacttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatg 420 ||||| |||||||| ||||| || |||| |||||| || || |||||||| || |||||| Sbjct: 62807 aagcgtggcgcccatttccttgatcccaaccgggctgttgtggagcagttatcaaccatg 62748 Query: 421 aaggccaccccacgcgcgtgcatgaacgggttcagcgagtccactgactcgatcacgctc 480 |||||||||||||| ||||||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 62747 aaggccaccccacgagcgtgcatgaatgggttcagggaatccacagactcgatcaaactc 62688 Query: 481 tcgttgatgatctcagagtaggagtgacccttctt 515 |||||||||||||| ||||| ||||| |||||||| Sbjct: 62687 tcgttgatgatctccgagtaagagtggcccttctt 62653 Score = 60.0 bits (30), Expect = 9e-06 Identities = 72/86 (83%) Strand = Plus / Minus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggggtggagtgggccaaggtcacca 594 ||||||||||||||||| || |||||||| ||||| || || | ||||||||| ||||| Sbjct: 62536 gccatcataagtgcaacatacactccagcagtgaaaggatgtaatgggccaagatcacct 62477 Query: 595 tctggccgggtcgagcgcaccttttc 620 ||||||| || || |||||| |||| Sbjct: 62476 gctggccgtgttgaccgcaccctttc 62451
>ref|NM_115723.2| Arabidopsis thaliana ketol-acid reductoisomerase AT3G58610 mRNA, complete cds Length = 2087 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1671 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1612 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1611 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1552 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1551 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1492 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1491 actccagcggtgaaggg 1475
>gb|BT000822.1| Arabidopsis thaliana ketol-acid reductoisomerase (At3g58610/F14P22_200) mRNA, complete cds Length = 1776 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1562 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1503 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1502 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1443 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1442 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1383 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1382 actccagcggtgaaggg 1366
>gb|BT000669.1| Arabidopsis thaliana clone RAFL07-09-M16 (R10765) putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2028 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1792 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1733 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1732 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1673 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1672 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1613 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1612 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1553 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1552 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1493 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1492 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1433 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1432 actccagcggtgaaggg 1416
>gb|AY096556.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1807 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1742 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1683 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1682 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1623 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1622 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1563 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1562 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1503 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1502 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1443 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1442 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1383 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1382 actccagcggtgaaggg 1366
>gb|AY065398.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 2058 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1851 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1792 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1791 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1732 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1731 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1672 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1671 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1612 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1611 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1552 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1551 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1492 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1491 actccagcggtgaaggg 1475
>gb|AF329500.1| Arabidopsis thaliana putative ketol-acid reductoisomerase (At3g58610) mRNA, complete cds Length = 1996 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1608 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1549 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1548 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1489 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1488 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1429 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1428 actccagcggtgaaggg 1412
>gb|AY062094.1| Arabidopsis thaliana AT3g58610/F14P22_200 mRNA, complete cds Length = 1990 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1786 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1727 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1726 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1667 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1666 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1607 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1606 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1547 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1546 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1487 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1486 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1427 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1426 actccagcggtgaaggg 1410
>dbj|AK221938.1| Arabidopsis thaliana mRNA for ketol-acid reductoisomerase, complete cds, clone: RAFL22-45-C07 Length = 1266 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1064 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1005 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1004 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 945 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 944 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 885 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 884 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 825 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 824 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 765 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 764 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 705 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 704 actccagcggtgaaggg 688
>gb|AF324671.2|AF324671 Arabidopsis thaliana AT3g58610 (AT3g58610/F14P22_200) mRNA, complete cds Length = 1980 Score = 161 bits (81), Expect = 3e-36 Identities = 303/377 (80%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1788 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1729 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1728 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1669 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1668 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1609 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 1608 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 1549 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1548 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1489 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1488 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1429 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1428 actccagcggtgaaggg 1412
>emb|X68150.1|ATKARE A.thaliana mRNA for ketol-acid reductoisomerase subunit Length = 1966 Score = 159 bits (80), Expect = 1e-35 Identities = 287/356 (80%) Strand = Plus / Minus Query: 217 gagatgtcgacggtgggcctcagctcggcgcagacctcgatggcgccgtggacggggtcc 276 ||||| || ||||| ||||| |||| ||||||||||| ||||| || ||||| || || Sbjct: 1745 gagatatcaacggtaggcctgagctgtgcgcagacctcaatggcaccatggactggatca 1686 Query: 277 gacatgaagttgctgatgaggtcctggttgatgggcgcatccttgtccaccgtcacaaac 336 || | |||||| ||||| ||||| |||||| | ||| | ||||||| | ||||| Sbjct: 1685 gagaagaagttactgattaggtctctgttgattgctgcaccactgtccacagccacaaga 1626 Query: 337 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 396 || || ||||||||||||||||| || || |||||||| |||||||| |||| | || Sbjct: 1625 gcttgttgggtcaggatgtagtcaaaccgtggcgcccatttcctcgaacccaatcttgct 1566 Query: 397 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 456 || || ||||||||||| |||||||||| ||| || | |||||||| || ||||| || Sbjct: 1565 gtggttgagcagttgtcaaccatgaaggacactcccctggcgtgcataaatgggtttaga 1506 Query: 457 gagtccactgactcgatcacgctctcgttgatgatctcagagtaggagtgacccttcttc 516 |||||||| || || ||||| |||||||||||||| || ||||| |||||||| |||||| Sbjct: 1505 gagtccacggattcaatcacactctcgttgatgatttctgagtaagagtgacctttcttc 1446 Query: 517 ctcagcacctcgatctgggccatcataagtgcaacgtaaactccagccgtgaaggg 572 |||| | ||| ||||| |||||||||||||| || ||||||||||| |||||||| Sbjct: 1445 ctcaagatctcaatctgagccatcataagtgctacataaactccagcggtgaaggg 1390
>emb|BX823796.1|CNS0A4R1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS76ZD11 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1983 Score = 145 bits (73), Expect = 2e-31 Identities = 301/377 (79%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 1803 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 1744 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 1743 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 1684 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 1683 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 1624 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || Sbjct: 1623 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccgtg 1564 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| | ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 1563 gcgtgcataagtgggtttagagagtccacggattcaatcacactctcgttgatgatttct 1504 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaa 555 ||||| |||||||| |||||||||| | ||| ||||| |||||||||||||| || ||| Sbjct: 1503 gagtaagagtgacctttcttcctcaagatctcaatctgagccatcataagtgctacataa 1444 Query: 556 actccagccgtgaaggg 572 |||||||| |||||||| Sbjct: 1443 actccagcggtgaaggg 1427
>emb|X69880.1|ATAAI A.thaliana gene for acetohydroxy acid isomeroreductase Length = 4395 Score = 121 bits (61), Expect = 3e-24 Identities = 259/325 (79%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 4127 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 4068 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 4067 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 4008 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 4007 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 3948 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 3947 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 3888 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 3887 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 3828 Query: 496 gagtaggagtgacccttcttcctca 520 ||||| |||||||| |||||||||| Sbjct: 3827 gagtaagagtgacctttcttcctca 3803 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggg 572 |||||||||||||| || ||||||||||| |||||||| Sbjct: 3441 gccatcataagtgctacataaactccagcggtgaaggg 3404
>emb|AL137082.1|ATF14P22 Arabidopsis thaliana DNA chromosome 3, BAC clone F14P22 Length = 94239 Score = 121 bits (61), Expect = 3e-24 Identities = 259/325 (79%) Strand = Plus / Minus Query: 196 aagtcagcatcggccgtcaccgagatgtcgacggtgggcctcagctcggcgcagacctcg 255 ||||| ||||| || | ||| ||||| || ||||| ||||| |||| ||||||||||| Sbjct: 68106 aagtctgcatcagcaggcacagagatatcaacggtaggcctgagctgtgcgcagacctca 68047 Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| || ||||| || || || | |||||| ||||| ||||| |||||| | ||| Sbjct: 68046 atggcaccatggactggatcagagaagaagttactgattaggtctctgttgattgctgca 67987 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||||| || || ||||||||||||||||| || || |||||||| Sbjct: 67986 ccactgtccacagccacaagagcttgttgggtcaggatgtagtcaaaccgtggcgcccat 67927 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 |||||||| |||| | || || || ||||||||||| |||||||||| ||| || | Sbjct: 67926 ttcctcgaacccaatcttgctgtggttgagcagttgtcaaccatgaaggacactcccctg 67867 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 |||||||| || ||||| || |||||||| || || ||||| |||||||||||||| || Sbjct: 67866 gcgtgcataaatgggtttagagagtccacggattcaatcacactctcgttgatgatttct 67807 Query: 496 gagtaggagtgacccttcttcctca 520 ||||| |||||||| |||||||||| Sbjct: 67806 gagtaagagtgacctttcttcctca 67782 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 535 gccatcataagtgcaacgtaaactccagccgtgaaggg 572 |||||||||||||| || ||||||||||| |||||||| Sbjct: 67420 gccatcataagtgctacataaactccagcggtgaaggg 67383
>emb|Y17796.1|PSY17796 Pisum sativum mRNA for ketol-acid reductoisomerase Length = 2036 Score = 117 bits (59), Expect = 5e-23 Identities = 230/287 (80%) Strand = Plus / Minus Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 1658 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 1599 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||| || |||||||| || || ||||| || || | ||| ||||| Sbjct: 1598 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 1539 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 1538 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 1479 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 || |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||| Sbjct: 1478 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 1419 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgggccatcat 542 ||||| || || ||||||||||||| ||||| |||||||||||||| Sbjct: 1418 gagtaagaatgccccttcttcctcaagacctcaatctgggccatcat 1372
>gb|AY702346.1| Phytophthora infestans ketol-acid reductoisomerase mRNA, partial cds Length = 1257 Score = 115 bits (58), Expect = 2e-22 Identities = 115/134 (85%) Strand = Plus / Minus Query: 337 gcctgctgggtcaggatgtagtcgaagcggggcgcccacttcctcgaccccagccgggcc 396 ||||||| |||||||||||||||||||| || |||||||| | || ||||| || || Sbjct: 1130 gcctgctccgtcaggatgtagtcgaagcgaggagcccacttacgggagcccagacgagcg 1071 Query: 397 gtcgtcgagcagttgtccaccatgaaggccaccccacgcgcgtgcatgaacgggttcagc 456 ||||| |||||||||||||||||| |||| || || || ||||||||| ||||||||||| Sbjct: 1070 gtcgtggagcagttgtccaccatgtaggcgacgccgcgagcgtgcatgtacgggttcagc 1011 Query: 457 gagtccactgactc 470 |||||||| ||||| Sbjct: 1010 gagtccacagactc 997
>emb|AJ251333.1|PSA251333 Pisum sativum aair gene for acetohydroxy acid isomeroreductase, exons 1-9 Length = 3343 Score = 101 bits (51), Expect = 3e-18 Identities = 222/279 (79%) Strand = Plus / Minus Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| ||||| || ||||| |||| |||||||||||| ||||||||||||||||| || Sbjct: 3013 atggccccgtgcactgggtctgacacgaagttgctgatcaggtcctggttgatgggagct 2954 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | ||||||| | ||| || |||||||| || || ||||| || || | ||| ||||| Sbjct: 2953 ccactgtccactgccaccaaggcctgctgagttagaatgtaatcaaatctgggagcccat 2894 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 ||||| || |||| || || || || ||||||||||| |||||||| | || || || Sbjct: 2893 ttccttgaacccaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccgcga 2834 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 || |||||||| || |||| || || || ||||||||||| ||||| || ||||| ||| Sbjct: 2833 gcatgcatgaatggattcaaagaatcaacagactcgatcacactctcattaatgatttca 2774 Query: 496 gagtaggagtgacccttcttcctcagcacctcgatctgg 534 ||||| || || ||||||||||||| ||||| |||||| Sbjct: 2773 gagtaagaatgccccttcttcctcaagacctcaatctgg 2735
>emb|X57073.1|SOAHRI S.oleracea AHRI mRNA for acetohydroxy acid reductoisomerase Length = 2050 Score = 101 bits (51), Expect = 3e-18 Identities = 111/131 (84%) Strand = Plus / Minus Query: 439 tgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctcagag 498 |||||||| ||||||| || ||||||| || ||||| ||||||||||||||||| ||| Sbjct: 1545 tgcatgaaggggttcaaggaatccactgcttcaatcacactctcgttgatgatctccgag 1486 Query: 499 taggagtgacccttcttcctcagcacctcgatctgggccatcataagtgcaacgtaaact 558 || ||||||||||||||||||| | ||| |||||||||||||| || ||||| || || Sbjct: 1485 tacgagtgacccttcttcctcaagatctctatctgggccatcattagagcaacatagaca 1426 Query: 559 ccagccgtgaa 569 ||||| ||||| Sbjct: 1425 ccagcagtgaa 1415
>gb|AC135231.23| Medicago truncatula clone mth2-28m10, complete sequence Length = 106771 Score = 81.8 bits (41), Expect = 3e-12 Identities = 209/265 (78%) Strand = Plus / Plus Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| ||||| || ||||| ||||||||||||||||| | |||||||||||| || || Sbjct: 73387 atggctccgtgcactgggtctgacatgaagttgctgattaagtcctggttgataggagct 73446 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 | |||||||| | ||| || |||||||| || ||||| || || || | ||| ||||| Sbjct: 73447 ccattgtccactgccaccaaagcctgctgagttaggatataatcaaatctgggggcccat 73506 Query: 376 ttcctcgaccccagccgggccgtcgtcgagcagttgtccaccatgaaggccaccccacgc 435 ||||| || || | || || || || ||||||||||| |||||||| | || || || Sbjct: 73507 ttccttgaacctaaccttgctgtggttgagcagttgtcaaccatgaaagaaacaccccga 73566 Query: 436 gcgtgcatgaacgggttcagcgagtccactgactcgatcacgctctcgttgatgatctca 495 || |||||||| || |||| || || ||||| |||||||| ||||| || ||||| ||| Sbjct: 73567 gcatgcatgaatggattcaaagaatcaactgattcgatcacactctcattaatgatttca 73626 Query: 496 gagtaggagtgacccttcttcctca 520 ||||| || || || |||||||||| Sbjct: 73627 gagtaagaatgtcctttcttcctca 73651
>gb|DQ448854.1| Theobroma cacao putative ketol acid reductoisomerase precursor-like protein, mRNA, partial sequence Length = 258 Score = 44.1 bits (22), Expect = 0.55 Identities = 99/125 (79%) Strand = Plus / Minus Query: 256 atggcgccgtggacggggtccgacatgaagttgctgatgaggtcctggttgatgggcgca 315 ||||| ||||| || ||||| |||| |||||||||||| | || ||||||||||| | Sbjct: 169 atggcaccgtgcaccgggtctgacaggaagttgctgatcngatcttggttgatgggggtg 110 Query: 316 tccttgtccaccgtcacaaacgcctgctgggtcaggatgtagtcgaagcggggcgcccac 375 |||| || || | ||| || ||||| ||||| |||||||| ||||| || || ||||| Sbjct: 109 cccttatcaactgccaccaaagcctgttgggtaaggatgtaatcgaatcgaggggcccat 50 Query: 376 ttcct 380 ||||| Sbjct: 49 ttcct 45
>gb|AC136921.8| Mus musculus chromosome 17, clone RP23-210D4, complete sequence Length = 244237 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaagttgctgatgaggtcctg 302 ||||||||||||||||||||| Sbjct: 46822 gaagttgctgatgaggtcctg 46842
>gb|AC129095.12| Mus musculus strain C57BL/6J clone rp23-360g16 map 17, complete sequence Length = 209946 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaagttgctgatgaggtcctg 302 ||||||||||||||||||||| Sbjct: 107699 gaagttgctgatgaggtcctg 107719
>gb|AC027251.6| Homo sapiens chromosome 8, clone RP11-14G5, complete sequence Length = 130377 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Plus Query: 503 agtgacccttcttcctcagcacctc 527 ||||| ||||||||||||||||||| Sbjct: 36169 agtgatccttcttcctcagcacctc 36193
>dbj|AK035823.1| Mus musculus 16 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:9630008E23 product:mitogen activated protein kinase kinase kinase 4, full insert sequence Length = 3816 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaagttgctgatgaggtcctg 302 ||||||||||||||||||||| Sbjct: 2783 gaagttgctgatgaggtcctg 2803
>gb|AC153999.7| Mus musculus 6 BAC RP24-395E8 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 188196 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 503 agtgacccttcttcctcagca 523 ||||||||||||||||||||| Sbjct: 36870 agtgacccttcttcctcagca 36850
>emb|BX119963.5| Zebrafish DNA sequence from clone DKEY-6A5 in linkage group 4, complete sequence Length = 229125 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 70 acacagcagctcacaggttcaaaca 94 ||||||||||||||||||| ||||| Sbjct: 144182 acacagcagctcacaggtttaaaca 144158
>gb|AC087901.20| Mus musculus strain C57BL/6J chromosome 17 clone rp23-22l23, complete sequence Length = 214372 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 282 gaagttgctgatgaggtcctg 302 ||||||||||||||||||||| Sbjct: 151591 gaagttgctgatgaggtcctg 151611
>gb|AC154000.4| Mus musculus 6 BAC RP24-313C5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 198580 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 503 agtgacccttcttcctcagca 523 ||||||||||||||||||||| Sbjct: 39352 agtgacccttcttcctcagca 39372
>ref|XM_428106.1| PREDICTED: Gallus gallus similar to hypothetical protein LOC255104 (LOC430549), partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 ctgacacagcagctcacagg 86 |||||||||||||||||||| Sbjct: 279 ctgacacagcagctcacagg 298
>ref|XM_789042.1| PREDICTED: Strongylocentrotus purpuratus similar to Forkhead box protein F1 (Forkhead-related protein FKHL5) (Forkhead-related transcription factor 1) (FREAC-1) (Forkhead-related activator-1) (LOC589400), mRNA Length = 1248 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 279 catgaagttgctgatgaggt 298 |||||||||||||||||||| Sbjct: 206 catgaagttgctgatgaggt 187
>emb|AL939118.1|SCO939118 Streptomyces coelicolor A3(2) complete genome; segment 15/29 Length = 303550 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 383 accccagccgggccgtcgtcgagc 406 ||||| |||||||||||||||||| Sbjct: 24366 acccccgccgggccgtcgtcgagc 24343
>gb|AY007310.1| Coturnix coturnix target of Jun 3 (TOJ3) mRNA, complete cds Length = 1772 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 tgatgaggtcctggttgatg 309 |||||||||||||||||||| Sbjct: 1575 tgatgaggtcctggttgatg 1556
>gb|AC138666.6| Mus musculus chromosome 5, clone RP24-140D11, complete sequence Length = 209938 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 503 agtgacccttcttcctcagc 522 |||||||||||||||||||| Sbjct: 145642 agtgacccttcttcctcagc 145661
>gb|AC123917.25| Mus musculus chromosome 15, clone RP23-281P5, complete sequence Length = 184959 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 70 acacagcagctcacaggttcaaac 93 |||||||||| ||||||||||||| Sbjct: 108353 acacagcagcacacaggttcaaac 108376 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,921,120 Number of Sequences: 3902068 Number of extensions: 3921120 Number of successful extensions: 70710 Number of sequences better than 10.0: 46 Number of HSP's better than 10.0 without gapping: 46 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 70563 Number of HSP's gapped (non-prelim): 124 length of query: 625 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 602 effective length of database: 17,143,297,704 effective search space: 10320265217808 effective search space used: 10320265217808 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
