| Clone Name | rbags21o08 |
|---|---|
| Clone Library Name | barley_pub |
>DPOD3_MOUSE (Q9EQ28) DNA polymerase delta subunit 3 (DNA polymerase delta| subunit p66) Length = 462 Score = 32.3 bits (72), Expect = 1.2 Identities = 17/34 (50%), Positives = 20/34 (58%) Frame = -1 Query: 354 EQKPVAKTEQKPKVAGPPKAKSNDMKRNQGKQQQ 253 EQ PV+ TE PK+A PP K + K GK QQ Sbjct: 262 EQPPVSVTE--PKLAAPPAQKKSSRKSEPGKVQQ 293
>MSK1_TOBAC (Q40518) Shaggy-related protein kinase NtK-1 (EC 2.7.11.1)| Length = 409 Score = 32.3 bits (72), Expect = 1.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = -2 Query: 176 LSFLLHSYVVCLLHCCFTGTRSDQCRMYLVCAIEHIP 66 + L H VVCL HC F+ T D+ +YL +E++P Sbjct: 118 MRLLDHPNVVCLKHCFFSTTEKDE--VYLNLVLEYVP 152
>SKEL_DROME (Q9GPJ1) Protein skeletor| Length = 743 Score = 31.2 bits (69), Expect = 2.7 Identities = 19/79 (24%), Positives = 27/79 (34%), Gaps = 1/79 (1%) Frame = -1 Query: 546 WEPRSMV-TPENPKKGQSKKDNASTNQSALKLQGAISLSNNTNDRXXXXXXXXXXXXXXX 370 W RS + TP NP G+S + + L+ +G + N R Sbjct: 14 WTQRSRLRTPRNPAAGESHRRGTGASARGLRRRGVRTARNQDGIRAAEALEESLLRNPNL 73 Query: 369 XXXKTEQKPVAKTEQKPKV 313 Q P+ QKP V Sbjct: 74 NPNHPNQNPIPNPHQKPNV 92
>CHLE_MIMIV (Q5UR02) Probable cholinesterase precursor (EC 3.1.1.8)| (Acylcholine acylhydrolase) Length = 579 Score = 30.0 bits (66), Expect = 6.0 Identities = 21/61 (34%), Positives = 30/61 (49%) Frame = +2 Query: 368 GFFLSGEGDDFFLGTFRSLVLLLRLIAPCSLRADWFVLALSFFDCPFFGFSGVTIDRGSH 547 G F+SG +DF +G F L + R+I + A + V A FF G S + RG + Sbjct: 130 GAFISGSPEDFGVGNFSILAVTKRIII---VAASYRVNAFGFFSSELLGKSQLEA-RGVY 185 Query: 548 G 550 G Sbjct: 186 G 186
>KSG7_ARATH (Q39011) Shaggy-related protein kinase eta (EC 2.7.11.1) (ASK-eta)| (BRASSINOSTEROID-INSENSITIVE 2) (ULTRACURVATA1) Length = 380 Score = 30.0 bits (66), Expect = 6.0 Identities = 13/32 (40%), Positives = 20/32 (62%) Frame = -2 Query: 161 HSYVVCLLHCCFTGTRSDQCRMYLVCAIEHIP 66 H VVCL HC F+ T D+ ++L +E++P Sbjct: 90 HPNVVCLKHCFFSTTSKDE--LFLNLVMEYVP 119
>APTH1_CANAL (Q5AGD1) Acyl-protein thioesterase 1 (EC 3.1.2.-)| Length = 231 Score = 29.6 bits (65), Expect = 7.9 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%) Frame = -1 Query: 636 SATSQGNFNYGVGNGGWGWSWMDRWIAARPW--EPRSMVTPENPK 508 SA + F +G+G+ G GWSW+ + ++ +P + V P PK Sbjct: 14 SAKAAVIFLHGLGDSGDGWSWLPQLVSQSKLINDPINYVFPNAPK 58
>NADK_MOUSE (P58058) NAD kinase (EC 2.7.1.23) (Poly(P)/ATP NAD kinase)| Length = 439 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/50 (36%), Positives = 24/50 (48%) Frame = +3 Query: 237 SQELQVVAASLGSSSCHSTSPWEGQPPLVSAPFSLLVSAPFSPLVSSCQE 386 SQEL +AS S+CH W P+ S +SA SP + S +E Sbjct: 11 SQELSADSASYNCSACHGDETWSYNHPIRGRAKSRSLSA--SPALGSTKE 58
>TOB1_RAT (Q8R5K6) Tob1 protein (Transducer of erbB-2 1)| Length = 365 Score = 29.6 bits (65), Expect = 7.9 Identities = 18/87 (20%), Positives = 34/87 (39%), Gaps = 1/87 (1%) Frame = -1 Query: 510 KKGQSKKDNASTNQSALKLQG-AISLSNNTNDRXXXXXXXXXXXXXXXXXXKTEQKPVAK 334 K G +K N+ + + ++ L+ N ND ++Q+P + Sbjct: 186 KFGSTKMKNSGRSSKVARTSPISLGLNVNVNDLLKQKAISSSMHSLYGLGLGSQQQPQPQ 245 Query: 333 TEQKPKVAGPPKAKSNDMKRNQGKQQQ 253 +Q P PP +++Q +QQQ Sbjct: 246 PQQPPSQPPPPPPPPQQQQQHQQQQQQ 272
>SAMD8_MOUSE (Q9DA37) Sphingomyelin synthase-related 1 (Sterile alpha motif| domain-containing 8) Length = 478 Score = 29.6 bits (65), Expect = 7.9 Identities = 12/43 (27%), Positives = 26/43 (60%) Frame = -3 Query: 226 KHAAKRLPDAV*YIL*SCLFFYTLMWFVSYIAVLLEQEVTNVE 98 KH+A+RL + SC++ + + F S+I V++ + V +++ Sbjct: 202 KHSARRLDPEYWKTILSCVYVFIVFGFTSFIMVIVHERVPDMQ 244 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 81,606,592 Number of Sequences: 219361 Number of extensions: 1605455 Number of successful extensions: 5327 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 5069 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5319 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5938641176 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)