ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbags21n18 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT024181.1| Zea mays clone EL01N0316B03 mRNA sequence Length = 1595 Score = 412 bits (208), Expect = e-112 Identities = 359/412 (87%) Strand = Plus / Plus Query: 196 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 255 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 354 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 413 Query: 256 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 315 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 414 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 473 Query: 316 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 375 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 474 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 533 Query: 376 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 435 |||||||||| |||||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 534 tgcactcggtcacgttctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 593 Query: 436 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 495 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 594 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 653 Query: 496 tcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 555 |||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 654 tcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 713 Query: 556 caatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||| | || ||||| |||| |||||||| |||||||||||| ||||| Sbjct: 714 caatcagtccagcattgcgaacagcacggatgagatgaggcaacttcaccct 765
>dbj|AK105687.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-B12, full insert sequence Length = 1966 Score = 408 bits (206), Expect = e-111 Identities = 360/414 (86%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1683 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1624 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1623 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1564 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1563 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1504 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1503 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1444 Query: 434 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 493 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1443 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1384 Query: 494 agtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 553 |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1383 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1324 Query: 554 gacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||| || | |||| ||||| |||||||| ||||||||| || ||||| Sbjct: 1323 gacaatctgtccagagttgcggacagcacggatgagatgaggcaatttcaccct 1270
>gb|BT009164.1| Triticum aestivum clone wl1n.pk0095.a10:fis, full insert mRNA sequence Length = 1165 Score = 404 bits (204), Expect = e-109 Identities = 358/412 (86%) Strand = Plus / Minus Query: 196 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 255 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 802 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 743 Query: 256 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 315 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 742 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 683 Query: 316 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 375 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 682 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 623 Query: 376 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 435 |||||||||| || ||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 622 tgcactcggtcacattctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 563 Query: 436 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 495 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 562 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 503 Query: 496 tcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 555 |||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 502 tcttcagcccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 443 Query: 556 caatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||| | || ||||| |||| |||||||| |||||||||||| ||||| Sbjct: 442 caatcagtccagcattgcgaacagcacggatgagatgaggcaacttcaccct 391
>gb|AY103635.1| Zea mays PCO124295 mRNA sequence Length = 2074 Score = 404 bits (204), Expect = e-109 Identities = 358/412 (86%) Strand = Plus / Minus Query: 196 agaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctcttcc 255 ||||||||| ||| |||||||||||| || || |||| || || |||||||||||||| Sbjct: 1687 agaaagccagtggcggcagtggcaggctgctgttgagccccgatcgcatcctcctcttcc 1628 Query: 256 tgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggt 315 | || ||||| ||||| || || ||||||||||| ||||| || |||||||||||||||| Sbjct: 1627 tcagcctctctgcgatgataaaggcgagctccagggactgggaggcattcagccttgggt 1568 Query: 316 cgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccga 375 ||||||| |||||||||||||| | ||| || ||||||||||||||||| |||||||||| Sbjct: 1567 cgcagtgggtgtggtagcggtcgctcagatcgtcgaaggtcacggtccgtgatccaccga 1508 Query: 376 tgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcctt 435 |||||||||| || ||||| ||||||||||||||||||| ||| || ||||||||||||| Sbjct: 1507 tgcactcggtcacattctgcccagtcatttcaaggtggacgcccccagggtggcttcctt 1448 Query: 436 cttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgag 495 |||||||||||||||||||||| |||||||| || || ||||||||| |||||||||| Sbjct: 1447 cttggtcatgcacatcgaagaaggcacgcacttcagccagaatggagtcaaatggacgag 1388 Query: 496 tcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtga 555 |||||| ||||| |||||||||||||||||||| ||||| || |||||||||||||||| Sbjct: 1387 tcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatccatgtga 1328 Query: 556 caatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||| | || ||||| |||| |||||||| |||||||||||| ||||| Sbjct: 1327 caatcagtccagcattgcgaacagcacggatgagatgaggcaacttcaccct 1276
>ref|XM_506482.1| PREDICTED Oryza sativa (japonica cultivar-group), P0594D10.136 mRNA Length = 1966 Score = 400 bits (202), Expect = e-108 Identities = 359/414 (86%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1684 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1625 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1624 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1565 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1564 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1505 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1504 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1445 Query: 434 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 493 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1444 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1385 Query: 494 agtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 553 |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1384 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1325 Query: 554 gacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||| || | |||| ||||| |||||| | ||||||||| || ||||| Sbjct: 1324 gacaatctgtccagagttgcggacagcacggataagatgaggcaatttcaccct 1271
>ref|NM_189880.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1966 Score = 400 bits (202), Expect = e-108 Identities = 359/414 (86%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1683 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1624 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1623 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1564 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1563 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1504 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1503 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1444 Query: 434 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 493 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1443 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1384 Query: 494 agtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 553 |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1383 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1324 Query: 554 gacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||| || | |||| ||||| |||||| | ||||||||| || ||||| Sbjct: 1323 gacaatctgtccagagttgcggacagcacggataagatgaggcaatttcaccct 1270
>dbj|AB122058.1| Oryza sativa (japonica cultivar-group) DAHPS2 mRNA for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, complete cds Length = 1951 Score = 400 bits (202), Expect = e-108 Identities = 359/414 (86%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1696 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1637 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1636 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1577 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1576 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1517 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1516 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1457 Query: 434 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 493 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1456 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1397 Query: 494 agtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 553 |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1396 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1337 Query: 554 gacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||| || | |||| ||||| |||||| | ||||||||| || ||||| Sbjct: 1336 gacaatctgtccagagttgcggacagcacggataagatgaggcaatttcaccct 1283
>dbj|AK069968.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038D13, full insert sequence Length = 1967 Score = 400 bits (202), Expect = e-108 Identities = 359/414 (86%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 1684 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 1625 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 1624 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 1565 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 1564 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 1505 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 1504 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 1445 Query: 434 ttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacg 493 |||||| ||||| ||||||||||| ||||| || || || |||||| ||||||||||| Sbjct: 1444 ttcttgatcatggacatcgaagaacgcacgtacttcagccagaatggaatcgaatggacg 1385 Query: 494 agtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgt 553 |||||||| ||||||||| ||||||||||||||||| |||||||| |||||||||||||| Sbjct: 1384 agtcttcagaccacatggagccttgatggtgtttccatgcatgggatcagtaatccatgt 1325 Query: 554 gacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||| || | |||| ||||| |||||| | ||||||||| || ||||| Sbjct: 1324 gacaatctgtccagagttgcggacagcacggataagatgaggcaatttcaccct 1271
>dbj|AK069083.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009C02, full insert sequence Length = 2173 Score = 343 bits (173), Expect = 4e-91 Identities = 297/341 (87%) Strand = Plus / Minus Query: 267 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 326 ||||| ||||| ||||||||||| || || ||||| |||||||||||||| ||||| ||| Sbjct: 1611 gcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgggtcacagtgggtg 1552 Query: 327 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 386 ||||||||||| | ||||||||||||||| ||||||| |||||||||||||| || || Sbjct: 1551 tggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccaccgatgcattcagtc 1492 Query: 387 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 446 |||||||| ||||||||||| |||||||| |||||||||||||| |||||||| ||||| Sbjct: 1491 acgttctgcccagtcatttccaggtggatacctcctgggtggctaccttcttgatcatgg 1432 Query: 447 acatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcanacca 506 ||||||||||| ||||| || || || |||||| ||||||||||||||||||| |||| Sbjct: 1431 acatcgaagaacgcacgtacttcagccagaatggaatcgaatggacgagtcttcagacca 1372 Query: 507 catggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaatctgnnca 566 ||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||| || Sbjct: 1371 catggagccttgatggtgtttccatgcatgggatcagtaatccatgtgacaatctgtcca 1312 Query: 567 naattgcngacagnacggatganatgaggcaacttnaccct 607 | |||| ||||| |||||| | ||||||||| || ||||| Sbjct: 1311 gagttgcggacagcacggataagatgaggcaatttcaccct 1271
>ref|XM_470798.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2016 Score = 337 bits (170), Expect = 3e-89 Identities = 280/317 (88%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1676 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1617 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1616 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1557 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1556 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 1497 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 482 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 1496 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 1437 Query: 483 tcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcatggggtca 542 || || || || ||||||| |||||| || |||||||||||||| |||||||| || ||| Sbjct: 1436 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 1377 Query: 543 gtaatccatgtgacaat 559 ||||||||||||||||| Sbjct: 1376 gtaatccatgtgacaat 1360
>dbj|AK061085.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G01, full insert sequence Length = 1463 Score = 337 bits (170), Expect = 3e-89 Identities = 280/317 (88%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1128 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1069 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1068 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1009 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1008 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 949 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 482 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 948 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 889 Query: 483 tcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcatggggtca 542 || || || || ||||||| |||||| || |||||||||||||| |||||||| || ||| Sbjct: 888 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 829 Query: 543 gtaatccatgtgacaat 559 ||||||||||||||||| Sbjct: 828 gtaatccatgtgacaat 812
>dbj|AK059247.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-G06, full insert sequence Length = 1635 Score = 337 bits (170), Expect = 3e-89 Identities = 280/317 (88%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 1303 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 1244 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 1243 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 1184 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 1183 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 1124 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggag 482 ||||||||||||||||| |||||||||||||||||||| || |||||| || ||||||| Sbjct: 1123 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcggccagaatggag 1064 Query: 483 tcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcatggggtca 542 || || || || ||||||| |||||| || |||||||||||||| |||||||| || ||| Sbjct: 1063 tcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcattggatca 1004 Query: 543 gtaatccatgtgacaat 559 ||||||||||||||||| Sbjct: 1003 gtaatccatgtgacaat 987
>dbj|AB122057.1| Oryza sativa (japonica cultivar-group) DAHPS1 mRNA for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, complete cds Length = 2059 Score = 313 bits (158), Expect = 4e-82 Identities = 264/299 (88%), Gaps = 3/299 (1%) Strand = Plus / Minus Query: 261 ctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcag 320 ||||||||||| ||||| | ||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 1706 ctctcggcgatgatgaaggagagctccagcgactgggacgcgttcagcctcgggtcgcag 1647 Query: 321 tgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcac 380 || |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 1646 tgggtgtggtagcggtcacccaggtcatcgaaggtgacggttcgggatccgccgatgcac 1587 Query: 381 tcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttgg 440 |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||| Sbjct: 1586 tcggttacgttctgcccagtcatctcgaggtggacacctcctgggtggcttccttcttga 1527 Query: 441 tcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttc 500 |||||||||||||||||||| || |||||| ||||||||| || || || |||||| Sbjct: 1526 tcatgcacatcgaagaatgctcgtacctcg---gcaatggagtcaaaggggcgtgtcttc 1470 Query: 501 anaccacatggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaat 559 | |||||| || |||||||||||||| |||||||| || |||||||||||||||||||| Sbjct: 1469 agaccacaaggagccttgatggtgttcccgtgcattggatcagtaatccatgtgacaat 1411
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 266 bits (134), Expect = 8e-68 Identities = 236/270 (87%) Strand = Plus / Plus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 25673140 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 25673199 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 25673200 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 25673259 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 25673260 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 25673319 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 25673320 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 25673379 Query: 434 ttcttggtcatgcacatcgaagaatgcacg 463 |||||| ||||| ||||||||||| ||||| Sbjct: 25673380 ttcttgatcatggacatcgaagaacgcacg 25673409 Score = 159 bits (80), Expect = 1e-35 Identities = 117/132 (88%) Strand = Plus / Plus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 25673840 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 25673899 Query: 536 ggggtcagtaatccatgtgacaatctgnncanaattgcngacagnacggatganatgagg 595 ||| ||||||||||||||||||||||| || | |||| ||||| |||||| | |||||| Sbjct: 25673900 gggatcagtaatccatgtgacaatctgtccagagttgcggacagcacggataagatgagg 25673959 Query: 596 caacttnaccct 607 ||| || ||||| Sbjct: 25673960 caatttcaccct 25673971
>dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0594D10 Length = 143200 Score = 266 bits (134), Expect = 8e-68 Identities = 236/270 (87%) Strand = Plus / Plus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 127113 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 127172 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 127173 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 127232 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 127233 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 127292 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 127293 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 127352 Query: 434 ttcttggtcatgcacatcgaagaatgcacg 463 |||||| ||||| ||||||||||| ||||| Sbjct: 127353 ttcttgatcatggacatcgaagaacgcacg 127382 Score = 159 bits (80), Expect = 1e-35 Identities = 117/132 (88%) Strand = Plus / Plus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 127813 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 127872 Query: 536 ggggtcagtaatccatgtgacaatctgnncanaattgcngacagnacggatganatgagg 595 ||| ||||||||||||||||||||||| || | |||| ||||| |||||| | |||||| Sbjct: 127873 gggatcagtaatccatgtgacaatctgtccagagttgcggacagcacggataagatgagg 127932 Query: 596 caacttnaccct 607 ||| || ||||| Sbjct: 127933 caatttcaccct 127944
>dbj|AB122082.1| Oryza sativa (japonica cultivar-group) DAHPS2 gene for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, exon 1-5, complete cds Length = 5967 Score = 266 bits (134), Expect = 8e-68 Identities = 236/270 (87%) Strand = Plus / Minus Query: 194 ttagaaagccaatgggggcagtggcaggttgttggtgagtcctgacttcatcctcctctt 253 |||||||||||||||||||| |||||||||| || ||| || ||| |||||||||| Sbjct: 5662 ttagaaagccaatgggggcaatggcaggttgctgttgaccccggaccgcatcctcctccg 5603 Query: 254 cctgagtctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgg 313 ||| |||||||||||||| ||||| ||||||||||| || || ||||| ||||||||||| Sbjct: 5602 cctcagtctctcggcgatgatgaaggcgagctccagggattgcgacgcgttcagccttgg 5543 Query: 314 gtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccacc 373 ||| ||||| |||||||||||||| | ||||||||||||||| ||||||| |||||||| Sbjct: 5542 gtcacagtgggtgtggtagcggtcgctcaggtcatcgaaggtgacggtccttgatccacc 5483 Query: 374 gatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttcc 433 |||||| || || |||||||| ||||||||||| |||||||| |||||||||||||| || Sbjct: 5482 gatgcattcagtcacgttctgcccagtcatttccaggtggatacctcctgggtggctacc 5423 Query: 434 ttcttggtcatgcacatcgaagaatgcacg 463 |||||| ||||| ||||||||||| ||||| Sbjct: 5422 ttcttgatcatggacatcgaagaacgcacg 5393 Score = 159 bits (80), Expect = 1e-35 Identities = 117/132 (88%) Strand = Plus / Minus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| Sbjct: 4962 aatggaatcgaatggacgagtcttcagaccacatggagccttgatggtgtttccatgcat 4903 Query: 536 ggggtcagtaatccatgtgacaatctgnncanaattgcngacagnacggatganatgagg 595 ||| ||||||||||||||||||||||| || | |||| ||||| |||||| | |||||| Sbjct: 4902 gggatcagtaatccatgtgacaatctgtccagagttgcggacagcacggataagatgagg 4843 Query: 596 caacttnaccct 607 ||| || ||||| Sbjct: 4842 caatttcaccct 4831
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 15446548 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 15446489 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 15446488 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 15446429 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 15446428 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 15446369 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 470 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 15446368 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 15446321 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||||||| || || || ||||||| |||||| || |||||||||||||| |||||||| Sbjct: 15444868 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 15444809 Query: 536 ggggtcagtaatccatgtgacaat 559 || |||||||||||||||||||| Sbjct: 15444808 tggatcagtaatccatgtgacaat 15444785
>gb|AC092075.7| Oryza sativa chromosome 3 BAC OSJNBa0017N12 genomic sequence, complete sequence Length = 164705 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Plus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 54978 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 55037 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 55038 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 55097 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 55098 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 55157 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 470 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 55158 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 55205 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||||||| || || || ||||||| |||||| || |||||||||||||| |||||||| Sbjct: 56658 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 56717 Query: 536 ggggtcagtaatccatgtgacaat 559 || |||||||||||||||||||| Sbjct: 56718 tggatcagtaatccatgtgacaat 56741
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 262 bits (132), Expect = 1e-66 Identities = 204/228 (89%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 |||||| || |||| || ||||||||||| ||||| | ||||||||| ||||| ||||| Sbjct: 15441082 atcctcttcctcctcagcctctcggcgatgatgaaggagagctccagcgactgggacgcg 15441023 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 |||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||||| Sbjct: 15441022 ttcagcctcgggtcgcagtgggtgtggtagcggtcacccaggtcatcgaaggtgacggtt 15440963 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || ||||| ||||||||||||||||||||||| |||||||| || ||||||| |||||| Sbjct: 15440962 cgggatccgccgatgcactcggttacgttctgcccagtcatctcgaggtggacacctcct 15440903 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcg 470 ||||||||||||||||| |||||||||||||||||||| || |||||| Sbjct: 15440902 gggtggcttccttcttgatcatgcacatcgaagaatgctcgtacctcg 15440855 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||||||| || || || ||||||| |||||| || |||||||||||||| |||||||| Sbjct: 15439402 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 15439343 Query: 536 ggggtcagtaatccatgtgacaat 559 || |||||||||||||||||||| Sbjct: 15439342 tggatcagtaatccatgtgacaat 15439319
>dbj|AB122083.1| Oryza sativa (japonica cultivar-group) DAHPS1 gene for 3-deoxy-D-arabino heptulosonate-7-phosphate synthase, exon 1-5, complete cds Length = 7765 Score = 258 bits (130), Expect = 2e-65 Identities = 190/210 (90%) Strand = Plus / Minus Query: 261 ctctcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcag 320 ||||||||||| ||||| | ||||||||| ||||| ||||| |||||||| ||||||||| Sbjct: 6947 ctctcggcgatgatgaaggagagctccagcgactgggacgcgttcagcctcgggtcgcag 6888 Query: 321 tgagtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcac 380 || |||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||| Sbjct: 6887 tgggtgtggtagcggtcacccaggtcatcgaaggtgacggttcgggatccgccgatgcac 6828 Query: 381 tcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttgg 440 |||||||||||||| |||||||| || ||||||| ||||||||||||||||||||||| Sbjct: 6827 tcggttacgttctgcccagtcatctcgaggtggacacctcctgggtggcttccttcttga 6768 Query: 441 tcatgcacatcgaagaatgcacgcacctcg 470 |||||||||||||||||||| || |||||| Sbjct: 6767 tcatgcacatcgaagaatgctcgtacctcg 6738 Score = 89.7 bits (45), Expect = 1e-14 Identities = 74/84 (88%) Strand = Plus / Minus Query: 476 aatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||||||| || || || ||||||| |||||| || |||||||||||||| |||||||| Sbjct: 5285 aatggagtcaaaggggcgtgtcttcagaccacaaggagccttgatggtgttcccgtgcat 5226 Query: 536 ggggtcagtaatccatgtgacaat 559 || |||||||||||||||||||| Sbjct: 5225 tggatcagtaatccatgtgacaat 5202
>gb|AF457957.1| Zea mays clone csi1.pk0011.e4, mRNA sequence Length = 447 Score = 178 bits (90), Expect = 1e-41 Identities = 155/178 (87%), Gaps = 1/178 (0%) Strand = Plus / Minus Query: 430 ttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatg 489 |||||||||||||||||||||||||||| |||||||| || || ||||||||| |||| Sbjct: 413 ttccttcttggtcatgcacatcgaagaa-gcacgcacttcagccagaatggagtcaaatg 355 Query: 490 gacgagtcttcanaccacatggggccttgatggtgtttccgtgcatggggtcagtaatcc 549 |||||||||||| ||||| |||||||||||||||||||| ||||| || |||||||||| Sbjct: 354 gacgagtcttcaggccacaaggggccttgatggtgtttccatgcataggatcagtaatcc 295 Query: 550 atgtgacaatctgnncanaattgcngacagnacggatganatgaggcaacttnaccct 607 ||||||||||| | || ||||| |||| |||||||| |||||||||||| ||||| Sbjct: 294 atgtgacaatcagtccagcattgcgaacagcacggatgagatgaggcaacttcaccct 237
>ref|NM_102090.2| Arabidopsis thaliana 3-deoxy-7-phosphoheptulonate synthase AT1G22410 mRNA, complete cds Length = 1911 Score = 137 bits (69), Expect = 5e-29 Identities = 221/272 (81%) Strand = Plus / Minus Query: 264 tcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtga 323 |||||||| ||||| | |||||| ||||||||||| ||||| || | || || ||||| Sbjct: 1601 tcggcgatgatgaaggagagctcaagagactgtgaagcattaaggcgaggatcacagtgc 1542 Query: 324 gtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcg 383 |||||||| || ||||| ||| ||||| || || || || || ||||||||||||||| Sbjct: 1541 gtgtggtaacgtgaacccaagtcgtcgaatgtgactgtgcgtgaaccaccgatgcactcg 1482 Query: 384 gttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtca 443 || |||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| || Sbjct: 1481 gtcacgttctgaccagtcatttctaggtgaattcctccggggtggctaccttcttgctcg 1422 Query: 444 tgcacatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcana 503 ||||| |||||||| || | ||| || || |||| ||| || ||||||||||| | | Sbjct: 1421 tgcacgtcgaagaaagctctcacttcagccaagatggcgtcaaagggacgagtcttgaga 1362 Query: 504 ccacatggggccttgatggtgtttccgtgcat 535 ||||| || ||||| ||||||||||||||||| Sbjct: 1361 ccacaaggagccttaatggtgtttccgtgcat 1330
>ref|XM_483024.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1746 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 1481 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 1422 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 1421 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 1362 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 1361 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 1302 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1301 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 1255
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 23927883 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 23927942 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 23927943 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 23928002 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 23928003 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 23928062 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 23928063 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 23928109
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0419H09 Length = 143533 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Plus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 61034 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 61093 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 61094 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 61153 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 61154 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 61213 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 61214 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 61260
>dbj|AK106196.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E11, full insert sequence Length = 1175 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 922 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 863 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 862 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 803 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 802 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 743 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 742 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 696
>dbj|AK070359.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B06, full insert sequence Length = 1746 Score = 117 bits (59), Expect = 4e-23 Identities = 185/227 (81%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||||||||| ||||| | ||||||||| ||||| || | |||||||||||| || || Sbjct: 1481 atcctcctctttctgagccgctcggcgatgatgaacgccaactccagagactgcgatgcg 1422 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacggtc 362 || ||||| ||||||||||| |||||||| || ||||| || ||||| ||||| || Sbjct: 1421 ttgagcctcgggtcgcagtgtgtgtggtatcgtgagcccagatcgtcgaatgtcaccgtg 1362 Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcct 422 || || || |||||||| || || || || ||||||||||| || || || | |||||| Sbjct: 1361 cgtgacccgccgatgcattctgtcacattttgtccagtcatctccagatgcacccctcct 1302 Query: 423 gggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||| |||||||| || |||||||| |||||||| |||||||| Sbjct: 1301 gggtggctgccttcttgttcgtgcacatcaaagaatgcgcgcacctc 1255
>gb|AC006551.6|AC006551 Arabidopsis thaliana chromosome I BAC F12K8 genomic sequence, complete sequence Length = 107200 Score = 115 bits (58), Expect = 2e-22 Identities = 160/194 (82%) Strand = Plus / Plus Query: 264 tcggcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtga 323 |||||||| ||||| | |||||| ||||||||||| ||||| || | || || ||||| Sbjct: 93342 tcggcgatgatgaaggagagctcaagagactgtgaagcattaaggcgaggatcacagtgc 93401 Query: 324 gtgtggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcg 383 |||||||| || ||||| ||| ||||| || || || || || ||||||||||||||| Sbjct: 93402 gtgtggtaacgtgaacccaagtcgtcgaatgtgactgtgcgtgaaccaccgatgcactcg 93461 Query: 384 gttacgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtca 443 || |||||||| ||||||||||| ||||| || ||||| |||||||| |||||||| || Sbjct: 93462 gtcacgttctgaccagtcatttctaggtgaattcctccggggtggctaccttcttgctcg 93521 Query: 444 tgcacatcgaagaa 457 ||||| |||||||| Sbjct: 93522 tgcacgtcgaagaa 93535 Score = 56.0 bits (28), Expect = 1e-04 Identities = 42/47 (89%) Strand = Plus / Plus Query: 489 ggacgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||||||||| | |||||| || ||||| ||||||||||||||||| Sbjct: 93968 ggacgagtcttgagaccacaaggagccttaatggtgtttccgtgcat 94014
>dbj|AB061254.1| Solanum tuberosum mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, complete cds Length = 1929 Score = 115 bits (58), Expect = 2e-22 Identities = 216/269 (80%) Strand = Plus / Minus Query: 267 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 326 ||||||||||| | |||||| || || || || ||||| ||||| || || ||||||||| Sbjct: 1645 gcgataatgaacgagagctcaagggattgagatgcattgagcctaggatcacagtgagtg 1586 Query: 327 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 386 ||||| || | ||| ||||| |||||||| || || ||||||||||||||||| || Sbjct: 1585 tggtaacgtgagctcagatcatcaaaggtcacagttcgtgatccaccgatgcactctgtg 1526 Query: 387 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 446 ||||| || || ||||| || || || | ||||||||||||||||||||||| ||||| Sbjct: 1525 acgttttggcctgtcatctccagatgaactcctcctgggtggcttccttcttgatcatga 1466 Query: 447 acatcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcanacca 506 ||||| |||||||| | |||||| | | ||||| || || || ||||| || | |||| Sbjct: 1465 acatcaaagaatgctcttacctcggccctgatggaatcaaaaggtcgagtttttagacca 1406 Query: 507 catggggccttgatggtgtttccgtgcat 535 || || ||||||||||| ||||||||||| Sbjct: 1405 caaggagccttgatggtatttccgtgcat 1377
>gb|J05191.1|POTARO1A S.tuberosum 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (aro1) mRNA, complete cds Length = 1784 Score = 103 bits (52), Expect = 7e-19 Identities = 156/191 (81%) Strand = Plus / Minus Query: 345 tcatcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatt 404 ||||| |||||||| || || ||||||||||||||||| || ||||| || || ||||| Sbjct: 1513 tcatcaaaggtcacagttcgtgatccaccgatgcactctgtgacgttttggcctgtcatc 1454 Query: 405 tcaaggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgc 464 || || || | ||||||||||||||||||||||| ||||| ||||| |||||||| | Sbjct: 1453 tccagatgaactcctcctgggtggcttccttcttgatcatgaacatcaaagaatgctctt 1394 Query: 465 acctcgttcataatggagtcgaatggacgagtcttcanaccacatggggccttgatggtg 524 |||||| | | ||||| || || || ||||| || | |||||| || ||||||||||| Sbjct: 1393 acctcggccctgatggaatcaaaaggtcgagtttttagaccacaaggagccttgatggta 1334 Query: 525 tttccgtgcat 535 ||||||||||| Sbjct: 1333 tttccgtgcat 1323
>gb|DQ166521.1| Fagus sylvatica putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 3 mRNA, complete cds Length = 1989 Score = 101 bits (51), Expect = 3e-18 Identities = 230/290 (79%) Strand = Plus / Minus Query: 270 ataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtgg 329 |||||||| || ||||| ||||| ||||| ||||| ||||| ||||| ||||| |||||| Sbjct: 1712 ataatgaaggcaagctcaagagattgtgaagcattgagcctagggtcacagtgggtgtgg 1653 Query: 330 tagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggttacg 389 || || || |||||||| || ||||| || || || ||||| |||||||| || ||| Sbjct: 1652 taacgtgaacttaggtcatcaaaagtcaccgttcgtgacccaccaatgcactctgtcacg 1593 Query: 390 ttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgcaca 449 ||||| || ||||| || | || | ||||| || |||||||||||||||||||||||| Sbjct: 1592 ttctggcctgtcatctctaaatgaactcctccaggatggcttccttcttggtcatgcaca 1533 Query: 450 tcgaagaatgcacgcacctcgttcataatggagtcgaatggacgagtcttcanaccacat 509 || ||||| || | |||||| | | |||| ||||| || ||||| |||| ||| || Sbjct: 1532 tcaaagaacgctctcacctccgccctgatggcatcgaaggggcgagttttcagaccgcag 1473 Query: 510 ggggccttgatggtgtttccgtgcatggggtcagtaatccatgtgacaat 559 || ||||| || |||||||| ||||| || ||| ||| |||||||||||| Sbjct: 1472 ggagcctttatagtgtttccatgcataggatcactaacccatgtgacaat 1423
>emb|Z21793.1|LEDAHPSNB L.esculentum DAHP synthase 2 precursor Length = 1916 Score = 99.6 bits (50), Expect = 1e-17 Identities = 158/194 (81%) Strand = Plus / Minus Query: 267 gcgataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtg 326 ||||||||||| | |||||| || || || || ||||| ||||| || || ||||||||| Sbjct: 1664 gcgataatgaatgagagctcaagggattgagatgcattgagcctaggatcacagtgagtg 1605 Query: 327 tggtagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggtt 386 ||||| || | ||| ||||| |||||||| || || |||||||| |||||||| || Sbjct: 1604 tggtaacgtgagctcagatcatcaaaggtcacagttcgtgatccaccaatgcactctgtg 1545 Query: 387 acgttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgc 446 ||||| || || ||||| ||||| || | ||||||||||||||||||||||| ||||| Sbjct: 1544 acgttttggcctgtcatctcaagatgaactcctcctgggtggcttccttcttgatcatga 1485 Query: 447 acatcgaagaatgc 460 ||||| |||||||| Sbjct: 1484 acatcaaagaatgc 1471
>ref|NM_120162.2| Arabidopsis thaliana DHS1 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE 1); 3-deoxy-7-phosphoheptulonate synthase AT4G39980 (DHS1) mRNA, complete cds Length = 1912 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>gb|BT000821.1| Arabidopsis thaliana 2-dehydro-3-deoxyphosphoheptonate aldolase (At4g39980/T5J17_150) mRNA, complete cds Length = 1578 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1511 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1452 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1451 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1392 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1391 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1339
>emb|AL161596.2|ATCHRIV92 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 92 Length = 112067 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 68784 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 68725 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 68724 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 68665 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 68664 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 68612
>emb|AL035708.2|ATT5J17 Arabidopsis thaliana DNA chromosome 4, BAC clone T5J17 (ESSA project) Length = 118267 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 79351 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 79292 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 79291 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 79232 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 79231 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 79179
>gb|AY140052.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1856 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>gb|AY090349.1| Arabidopsis thaliana AT4g39980/T5J17_150 mRNA, complete cds Length = 1855 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1584 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1525 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1524 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1465 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1464 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1412
>emb|BX828843.1|CNS0A2CS Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL43ZE06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1819 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1575 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1516 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1515 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1456 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1455 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1403
>gb|M74819.1|ATHDHS1 A.thaliana 3-deoxy-D-arabino-heptulosonate y-phosphate synthase (DHS1) mRNA, complete cds Length = 1918 Score = 97.6 bits (49), Expect = 4e-17 Identities = 142/173 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 1586 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 1527 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 1526 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 1467 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 1466 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 1414
>gb|M64261.1|TOBDAHPS1 Nicotiana tabacum 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, complete cds Length = 1928 Score = 93.7 bits (47), Expect = 6e-16 Identities = 155/191 (81%) Strand = Plus / Minus Query: 270 ataatgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtgg 329 |||||||| |||||||| || || || || ||||| ||||| || || ||||| |||||| Sbjct: 1654 ataatgaaggcgagctcaagggattgagatgcattgagcctaggatcacagtgggtgtgg 1595 Query: 330 tagcggtcacccaggtcatcgaaggtcacggtccgcgatccaccgatgcactcggttacg 389 || || | ||| ||||| |||||||| || || |||||||| |||||||| || ||| Sbjct: 1594 taacgtgagctcagatcatcaaaggtcacagttcgtgatccaccaatgcactctgtgacg 1535 Query: 390 ttctgtccagtcatttcaaggtggatgcctcctgggtggcttccttcttggtcatgcaca 449 || || || ||||| || ||||| | ||||||||||||||||||||||| ||||| ||| Sbjct: 1534 ttttggcctgtcatctccaggtgtactcctcctgggtggcttccttcttgctcatgaaca 1475 Query: 450 tcgaagaatgc 460 || |||||||| Sbjct: 1474 tcaaagaatgc 1464
>gb|M95201.1|POTSHKB Potato 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (shkB) mRNA, complete cds Length = 1995 Score = 87.7 bits (44), Expect = 4e-14 Identities = 217/275 (78%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||| || ||||||| |||||||| || |||||||||||||| |||| || Sbjct: 1581 agagactgagaagcattcaatcttgggtcacaatgagtgtggtagcgagagcccaaatcg 1522 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 || |||| || || || |||||||| |||||||| || || || || || |||||||| Sbjct: 1521 tcataggttactgttcgtgatccaccaatgcactcagtcacattttgccctgtcatttct 1462 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacc 467 ||||| || || || ||||||||||||||||| ||||||||||||||||| || || ||| Sbjct: 1461 aggtgaataccaccagggtggcttccttcttgctcatgcacatcgaagaaagctcggacc 1402 Query: 468 tcgttcataatggagtcgaatggacgagtcttcanaccacatggggccttgatggtgttt 527 || || || || ||||| | ||| || || | |||||||| ||||||||||| || Sbjct: 1401 tcagccaggattgaatcgaaagcacgggttttgagtccacatggtgccttgatggtattc 1342 Query: 528 ccgtgcatggggtcagtaatccatgtgacaatctg 562 |||||||| || ||| || |||||| |||||||| Sbjct: 1341 ccgtgcattggatcacaaacccatgtcacaatctg 1307
>emb|BX828779.1|CNS0A2IG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL37ZH01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1213 Score = 81.8 bits (41), Expect = 2e-12 Identities = 140/173 (80%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 ||||||||| |||| |||||||||||||| ||||| |||||||| || || |||||| Sbjct: 1037 agagactgttacgcgttcagccttgggtcacagtgtgtgtggtaacgagaactgaggtca 978 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| || Sbjct: 977 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcatctcg 918 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 || ||||| || || | ||||||||||||||| || |||||||| | |||||| Sbjct: 917 agatggataccgcccgcgtggcttccttcttgctcgtgcacatcaaggaatgc 865
>ref|NM_197776.1| Oryza sativa (japonica cultivar-group) putative 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (OSJNBa0027P10.18), mRNA Length = 1581 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 291 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 350 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 1493 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 1434 Query: 351 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 410 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 1433 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 1374 Query: 411 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 1373 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 1327
>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete sequence Length = 141307 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 291 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 350 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 85220 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 85279 Query: 351 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 410 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 85280 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 85339 Query: 411 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 85340 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 85386
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 291 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 350 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 21770537 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 21770596 Query: 351 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 410 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 21770597 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 21770656 Query: 411 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 21770657 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 21770703
>dbj|AK109667.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-145-A06, full insert sequence Length = 1619 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Minus Query: 291 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 350 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 1448 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 1389 Query: 351 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 410 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 1388 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 1329 Query: 411 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 1328 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 1282
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 77.8 bits (39), Expect = 4e-11 Identities = 135/167 (80%) Strand = Plus / Plus Query: 291 gactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcg 350 ||||| || ||||||||||| ||||||||||| ||| ||||||| | || ||||| Sbjct: 21782200 gactgcgatgcattcagcctggggtcgcagtgcgtgcggtagcgagagctgagatcatca 21782259 Query: 351 aaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaagg 410 | |||||| ||| |||||||| |||||||| || |||||||| || ||||| || ||| Sbjct: 21782260 agggtcaccgtcttggatccaccaatgcactctgtaacgttctgccctgtcatctccagg 21782319 Query: 411 tggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 || || ||||| |||| |||||| ||||| ||||| ||||||||||| Sbjct: 21782320 tgaatccctccagggtagcttccctcttgctcatggacatcgaagaa 21782366
>dbj|D21108.1|RICAD403 Oryza sativa mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, partial sequence Length = 381 Score = 73.8 bits (37), Expect = 6e-10 Identities = 65/77 (84%) Strand = Plus / Minus Query: 531 tgcatggggtcagtaatccatgtgacaatctgnncanaattgcngacagnacggatgana 590 |||||||| ||||||||||||||||||||||| || | |||| ||||| |||| | | | Sbjct: 378 tgcatgggatcagtaatccatgtgacaatctgtccagagttgcggacagcacggntaaga 319 Query: 591 tgaggcaacttnaccct 607 |||||||| || ||||| Sbjct: 318 tgaggcaatttcaccct 302
>gb|AY150519.1| Vitis vinifera 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase mRNA, partial cds Length = 794 Score = 71.9 bits (36), Expect = 2e-09 Identities = 78/92 (84%) Strand = Plus / Minus Query: 243 atcctcctcttcctgagtctctcggcgataatgaaagcgagctccagagactgtgacgca 302 ||||| |||||||| || | ||| || ||||||||||||||||| |||||||| || ||| Sbjct: 766 atccttctcttcctaaggcgctctgcaataatgaaagcgagctcaagagactgggaagca 707 Query: 303 ttcagccttgggtcgcagtgagtgtggtagcg 334 || ||||| ||||| || || ||||||||||| Sbjct: 706 ttgagcctagggtcacaatgggtgtggtagcg 675 Score = 63.9 bits (32), Expect = 6e-07 Identities = 115/143 (80%) Strand = Plus / Minus Query: 417 cctcctgggtggcttccttcttggtcatgcacatcgaagaatgcacgcacctcgttcata 476 ||||| ||||||||||||||||| |||||||| || |||||||| | || ||| | | Sbjct: 592 cctcccgggtggcttccttcttgctcatgcacgtcaaagaatgctcttacttcggccctg 533 Query: 477 atggagtcgaatggacgagtcttcanaccacatggggccttgatggtgtttccgtgcatg 536 |||| ||||| || ||||| || | |||||| || |||||||| |||||||| ||||| Sbjct: 532 atggcatcgaaggggcgagttttgagaccacagggagccttgatcgtgtttccatgcata 473 Query: 537 gggtcagtaatccatgtgacaat 559 || ||| | | |||||||||||| Sbjct: 472 ggatcactgacccatgtgacaat 450
>emb|BX828152.1|CNS0A29W Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH57ZG02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 391 Score = 71.9 bits (36), Expect = 2e-09 Identities = 96/116 (82%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct: 142 agagactgtgacgcgttcagccttgggtcacagtgtgtgtggtagcgagaactgaggtca 83 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcat 403 ||| ||||||| || || || || || ||||| || || |||||||| || ||||| Sbjct: 82 tcgtaggtcacagtgcgggaccctccaatgcattctgtcacgttctgacctgtcat 27
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 67.9 bits (34), Expect = 4e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 369 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 418 ||||||||||| ||||| ||||||||||| |||||||||| ||||||||| Sbjct: 4307314 ccaccgatgcattcggtgacgttctgtccggtcatttcaatgtggatgcc 4307265
>emb|Z21792.1|LEDAHPSNA L.esculentum DAHP synthase 1 precursor Length = 1695 Score = 67.9 bits (34), Expect = 4e-08 Identities = 136/170 (80%) Strand = Plus / Minus Query: 288 agagactgtgacgcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtca 347 |||||||| || ||||||| |||||||| || |||||||||||||| |||| || Sbjct: 1493 agagactgagatgcattcaatcttgggtcacaatgagtgtggtagcgagagcccaaatcg 1434 Query: 348 tcgaaggtcacggtccgcgatccaccgatgcactcggttacgttctgtccagtcatttca 407 || |||| || || || |||||||| ||||| || || || || || || ||||||||| Sbjct: 1433 tcataggttactgttcgtgatccaccaatgcattcagtcacattttgccctgtcatttca 1374 Query: 408 aggtggatgcctcctgggtggcttccttcttggtcatgcacatcgaagaa 457 ||||| || | | ||||||||||||||||| ||||||||||||||||| Sbjct: 1373 aggtgaatacaccaggggtggcttccttcttgctcatgcacatcgaagaa 1324
>emb|Y14797.1|MCY14797 Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, DS1 Length = 1923 Score = 65.9 bits (33), Expect = 1e-07 Identities = 129/161 (80%) Strand = Plus / Minus Query: 300 gcattcagccttgggtcgcagtgagtgtggtagcggtcacccaggtcatcgaaggtcacg 359 ||||| |||||||| || ||||| ||||||||||| ||||||||||| || || || Sbjct: 1631 gcattaagccttggatcacagtgtgtgtggtagcgtgagcccaggtcatcaaatgtaaca 1572 Query: 360 gtccgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcct 419 || || ||||| || ||||| || || || ||||| ||||||||||| | || | || Sbjct: 1571 gtacgagatccgccaatgcattcagtcacattctgaccagtcatttctaaatgaacacca 1512 Query: 420 cctgggtggcttccttcttggtcatgcacatcgaagaatgc 460 ||||||||||| |||||||| ||||| || ||||||||||| Sbjct: 1511 cctgggtggctgccttcttgctcatgtacgtcgaagaatgc 1471
>ref|NM_119505.2| Arabidopsis thaliana DHS2 (3-DEOXY-D-ARABINO-HEPTULOSONATE 7-PHOSPHATE SYNTHASE); 3-deoxy-7-phosphoheptulonate synthase AT4G33510 (DHS2) mRNA, complete cds Length = 1821 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 333 cg 334 || Sbjct: 1446 cg 1445
>emb|AL161583.2|ATCHRIV79 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 79 Length = 199536 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 146571 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 146512 Query: 333 cg 334 || Sbjct: 146511 cg 146510
>emb|AL035678.1|ATF17M5 Arabidopsis thaliana DNA chromosome 4, BAC clone F17M5 (ESSA project) Length = 96475 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 81792 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 81733 Query: 333 cg 334 || Sbjct: 81732 cg 81731
>gb|AY124858.1| Arabidopsis thaliana AT4g33510/F17M5_270 mRNA, complete cds Length = 1524 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1457 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1398 Query: 333 cg 334 || Sbjct: 1397 cg 1396
>gb|AF361798.1| Arabidopsis thaliana AT4g33510/F17M5_270 mRNA, complete cds Length = 1706 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 333 cg 334 || Sbjct: 1446 cg 1445
>emb|BX827446.1|CNS0A4BJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS55ZG12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1737 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1504 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1445 Query: 333 cg 334 || Sbjct: 1444 cg 1443
>gb|AY087659.1| Arabidopsis thaliana clone 37432 mRNA, complete sequence Length = 1736 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1506 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1447 Query: 333 cg 334 || Sbjct: 1446 cg 1445
>gb|M74820.1|ATHDHS2 A.thaliana 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase (DHS2) mRNA, complete cds Length = 1856 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 273 atgaaagcgagctccagagactgtgacgcattcagccttgggtcgcagtgagtgtggtag 332 ||||| || |||||||||||||| || || || || |||||||| ||||||||||||||| Sbjct: 1519 atgaatgcaagctccagagactgagatgcgttgagtcttgggtcacagtgagtgtggtag 1460 Query: 333 cg 334 || Sbjct: 1459 cg 1458
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 369 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 418 ||||||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 4520808 ccaccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 4520759 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 300 gcattcagccttgggtcgcagtgagtgtggtagcg 334 ||||||| || |||||||||||||||||| ||||| Sbjct: 4520877 gcattcatccgtgggtcgcagtgagtgtgatagcg 4520843
>emb|Y15113.1|MC3DDAH7P Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase Length = 2134 Score = 52.0 bits (26), Expect = 0.002 Identities = 74/90 (82%) Strand = Plus / Minus Query: 369 ccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctgggtgg 428 ||||| |||||||| || || || ||||| |||||||| || || | ||||| || ||| Sbjct: 1539 ccaccaatgcactctgtcacattttgtcctgtcatttccagatgaactcctccaggatgg 1480 Query: 429 cttccttcttggtcatgcacatcgaagaat 458 || |||||||| ||||||||||| |||||| Sbjct: 1479 ctcccttcttgctcatgcacatcaaagaat 1450
>emb|Y14798.1|MCY14798 Morinda citrifolia mRNA for 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase, DS2 Length = 1944 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 428 gcttccttcttggtcatgcacatcgaagaatgcacgcacctc 469 |||||||||||| ||||||||||| |||||||| | |||||| Sbjct: 1404 gcttccttcttgatcatgcacatcaaagaatgctctcacctc 1363
>gb|AE004711.1| Pseudomonas aeruginosa PAO1, section 272 of 529 of the complete genome Length = 10646 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Minus Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 418 ||||| || |||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 3150 cgcgaaccgccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 3095 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Minus Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtc 337 ||||||| ||||||||||| |||||||||||||| Sbjct: 3210 ttcagccgcgggtcgcagtgggtgtggtagcggtc 3176
>gb|AF440523.1| Pseudomonas aeruginosa strain C genomic sequence, gene island PAGI-2(C) Length = 158230 Score = 48.1 bits (24), Expect = 0.034 Identities = 48/56 (85%) Strand = Plus / Plus Query: 363 cgcgatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcc 418 ||||| || |||||||||||||| |||||||| || ||||| || | ||||||||| Sbjct: 2021 cgcgaaccgccgatgcactcggtgacgttctgcccggtcatctcgatgtggatgcc 2076 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 303 ttcagccttgggtcgcagtgagtgtggtagcggtc 337 ||||||| ||||||||||| |||||||||||||| Sbjct: 1961 ttcagccgcgggtcgcagtgggtgtggtagcggtc 1995
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 46.1 bits (23), Expect = 0.13 Identities = 23/23 (100%) Strand = Plus / Plus Query: 312 gggtcgcagtgagtgtggtagcg 334 ||||||||||||||||||||||| Sbjct: 1941336 gggtcgcagtgagtgtggtagcg 1941358 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 512 ggccttgatggtgtttccgtgcatggggtc 541 ||||||||||||||| |||||||| ||||| Sbjct: 1941536 ggccttgatggtgttgccgtgcatcgggtc 1941565 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 372 ccgatgcactcggttacgttctgtccagtcat 403 |||||||| ||||| ||||||||||| ||||| Sbjct: 1941396 ccgatgcattcggtgacgttctgtccggtcat 1941427
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 46.1 bits (23), Expect = 0.13 Identities = 32/35 (91%) Strand = Plus / Plus Query: 369 ccaccgatgcactcggttacgttctgtccagtcat 403 ||||||||||| ||||| |||||||| |||||||| Sbjct: 2088232 ccaccgatgcattcggtgacgttctgcccagtcat 2088266 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 512 ggccttgatggtgtttccgtgcat 535 ||||||||||||||| |||||||| Sbjct: 2088375 ggccttgatggtgttgccgtgcat 2088398
>gb|AF012864.1|AF012864 Petroselinum crispum plastidic 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 2 (pDAHPS2) mRNA, nuclear gene encoding plastid protein, complete cds Length = 2094 Score = 46.1 bits (23), Expect = 0.13 Identities = 68/83 (81%) Strand = Plus / Minus Query: 366 gatccaccgatgcactcggttacgttctgtccagtcatttcaaggtggatgcctcctggg 425 |||||||| ||||||||||| ||||| || || ||||| || || || || || || || Sbjct: 1550 gatccaccaatgcactcggtcacgttttggcctgtcatctccagatgaattccgccagga 1491 Query: 426 tggcttccttcttggtcatgcac 448 |||||||||||||| || ||||| Sbjct: 1490 tggcttccttcttgctcgtgcac 1468 Score = 42.1 bits (21), Expect = 2.1 Identities = 38/44 (86%) Strand = Plus / Minus Query: 492 cgagtcttcanaccacatggggccttgatggtgtttccgtgcat 535 ||||| |||| ||||| || || |||||||||||||||||||| Sbjct: 1424 cgagttttcaagccacagggagctttgatggtgtttccgtgcat 1381
>gb|AC123946.4| Mus musculus BAC clone RP23-97L17 from chromosome 12, complete sequence Length = 193610 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 actatctaacccctcctccctg 182 |||||||||||||||||||||| Sbjct: 176404 actatctaacccctcctccctg 176383
>gb|AC164615.3| Mus musculus BAC clone RP23-320N6 from chromosome 12, complete sequence Length = 201524 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 161 actatctaacccctcctccctg 182 |||||||||||||||||||||| Sbjct: 71598 actatctaacccctcctccctg 71577
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Minus Query: 512 ggccttgatggtgtttccgtgcatggggtc 541 ||||||||||||||| |||||||| ||||| Sbjct: 4952230 ggccttgatggtgttgccgtgcatcgggtc 4952201
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 512 ggccttgatggtgtttccgtgcatggggtc 541 ||||||||||||||| |||||||| ||||| Sbjct: 2434963 ggccttgatggtgttgccgtgcatcgggtc 2434992
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 512 ggccttgatggtgtttccgtgcatggggtc 541 ||||||||||||||| |||||||| ||||| Sbjct: 1638976 ggccttgatggtgttgccgtgcatcgggtc 1639005 Score = 44.1 bits (22), Expect = 0.53 Identities = 25/26 (96%) Strand = Plus / Plus Query: 312 gggtcgcagtgagtgtggtagcggtc 337 ||||||||||| |||||||||||||| Sbjct: 1638776 gggtcgcagtgggtgtggtagcggtc 1638801 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 372 ccgatgcactcggttacgttctgtccagtcat 403 |||||||||||||| |||||||| || ||||| Sbjct: 1638836 ccgatgcactcggtgacgttctgcccggtcat 1638867
>emb|BX883042.1| Rattus norvegicus chromosome 20, major histocompatibility complex, assembled from 40 BACs, strain Brown Norway (BN/ssNHsd), RT1n haplotype; segment 1/11 Length = 348780 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 248 cctcttcctgagtctctcggc 268 ||||||||||||||||||||| Sbjct: 96541 cctcttcctgagtctctcggc 96561
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 513 gccttgatggtgtttccgtgcatggggtc 541 |||||||||||||| ||||||||||||| Sbjct: 1294157 gccttgatggtgttggcgtgcatggggtc 1294185
>gb|AC007736.3| Homo sapiens BAC clone RP11-15J24 from 2, complete sequence Length = 172476 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 240 ttcatcctcctcttcctgagtctct 264 |||||||||||| |||||||||||| Sbjct: 37901 ttcatcctcctcctcctgagtctct 37877
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 ccgatgcactcggttacgttctgtccagtcat 403 |||||||||||||| |||||||| || ||||| Sbjct: 1347017 ccgatgcactcggtgacgttctgcccggtcat 1346986
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 512 ggccttgatggtgtttccgtgcat 535 ||||||||||||||| |||||||| Sbjct: 4182675 ggccttgatggtgttgccgtgcat 4182652
>gb|AC127597.5| Mus musculus BAC clone RP23-71A1 from chromosome 14, complete sequence Length = 235368 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 2 aaaaacaaagnaaacaaaacata 24 |||||||||| |||||||||||| Sbjct: 9598 aaaaacaaagcaaacaaaacata 9576
>gb|AC138314.4| Mus musculus BAC clone RP23-218B5 from chromosome 14, complete sequence Length = 211932 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Plus Query: 2 aaaaacaaagnaaacaaaacata 24 |||||||||| |||||||||||| Sbjct: 173418 aaaaacaaagcaaacaaaacata 173440
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 372 ccgatgcactcggttacgttctgtccagtcat 403 |||||||||||||| |||||||| || ||||| Sbjct: 1685118 ccgatgcactcggtgacgttctgcccggtcat 1685087
>gb|AC018861.9| Homo sapiens chromosome 8, clone RP11-577N1, complete sequence Length = 187047 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 ttcatcctcctcttcctgag 259 |||||||||||||||||||| Sbjct: 122204 ttcatcctcctcttcctgag 122185
>gb|AE005900.1| Caulobacter crescentus CB15 section 226 of 359 of the complete genome Length = 14916 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 315 tcgcagtgagtgtggtagcggtcacccaggtc 346 |||||||| |||||||||||||| ||||||| Sbjct: 7752 tcgcagtgggtgtggtagcggtcggccaggtc 7783
>gb|AF290914.2| Mus musculus stabilin-1 mRNA, complete cds Length = 7931 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 5555 gatggtgtttccgtgcatgg 5536
>gb|AF173226.1| Stenotrophomonas maltophilia multidrug efflux system SmeR (smeR), SmeS (smeS), SmeA (smeA), SmeB (smeB), and SmeC (smeC) genes, complete cds Length = 8560 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 gcggtcacccaggtcatcga 351 |||||||||||||||||||| Sbjct: 3945 gcggtcacccaggtcatcga 3964
>ref|XM_693655.1| PREDICTED: Danio rerio similar to HECT, C2 and WW domain containing E3 ubiquitin protein ligase 2 (LOC570206), mRNA Length = 3418 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 239 cttcatcctcctcttcctga 258 |||||||||||||||||||| Sbjct: 868 cttcatcctcctcttcctga 849
>gb|AC154446.2| Mus musculus BAC clone RP24-181E7 from chromosome 14, complete sequence Length = 163771 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 108177 gatggtgtttccgtgcatgg 108196
>gb|BC031166.1| Mus musculus stabilin 1, mRNA (cDNA clone IMAGE:4983573), partial cds Length = 3911 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 1478 gatggtgtttccgtgcatgg 1459
>dbj|AK028441.1| Mus musculus 0 day neonate skin cDNA, RIKEN full-length enriched library, clone:4631403B18 product:inferred: hypothetical {Homo sapiens}, full insert sequence Length = 3454 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 342 gatggtgtttccgtgcatgg 323
>gb|BC049247.1| Mus musculus stabilin 1, mRNA (cDNA clone IMAGE:5038209), containing frame-shift errors Length = 3025 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 527 gatggtgtttccgtgcatgg 508
>gb|AC093892.3| Homo sapiens BAC clone RP11-702L18 from 2, complete sequence Length = 111078 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gggggcagtggcaggttgtt 226 |||||||||||||||||||| Sbjct: 17468 gggggcagtggcaggttgtt 17487
>ref|XM_214279.3| PREDICTED: Rattus norvegicus stabilin 1 (predicted) (Stab1_predicted), mRNA Length = 8055 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 5814 gatggtgtttccgtgcatgg 5795
>emb|AL163302.2|HS21C102 Homo sapiens chromosome 21 segment HS21C102 Length = 340000 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tgcaaatgccaactatctaa 169 |||||||||||||||||||| Sbjct: 99373 tgcaaatgccaactatctaa 99354
>gb|AC159206.2| Mus musculus BAC clone RP23-214M19 from chromosome 7, complete sequence Length = 224088 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 235 ctgacttcatcctcctcttc 254 |||||||||||||||||||| Sbjct: 79836 ctgacttcatcctcctcttc 79855
>emb|X79860.1|RNH1SHR R.norvegicus H1SHR mRNA Length = 1789 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 239 cttcatcctcctcttcctga 258 |||||||||||||||||||| Sbjct: 1035 cttcatcctcctcttcctga 1054
>emb|BX322562.1|HSQ21A11 Homo sapiens chromosome 21 from cosmid LL21NC02-21A1 map 21q22.3 region D21S171-LA161, complete sequence Length = 45600 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 tgcaaatgccaactatctaa 169 |||||||||||||||||||| Sbjct: 17837 tgcaaatgccaactatctaa 17818
>emb|AL929548.8| Zebrafish DNA sequence from clone CH211-159E17, complete sequence Length = 168842 Score = 40.1 bits (20), Expect = 8.3 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 taaaaacaaagnaaacaaaacat 23 ||||||||||| ||||||||||| Sbjct: 59063 taaaaacaaagcaaacaaaacat 59041
>ref|NM_138672.1| Mus musculus stabilin 1 (Stab1), mRNA Length = 7931 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 gatggtgtttccgtgcatgg 537 |||||||||||||||||||| Sbjct: 5555 gatggtgtttccgtgcatgg 5536
>emb|CT485678.1| Xenopus tropicalis finished cDNA, clone TEgg038i22 Length = 3556 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 103 agcagcccaccatacaaact 122 |||||||||||||||||||| Sbjct: 1437 agcagcccaccatacaaact 1418
>dbj|AB060203.1| Macaca fascicularis brain cDNA clone:QflA-10629, full insert sequence Length = 2948 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gtggatgcctcctgggtggc 429 |||||||||||||||||||| Sbjct: 989 gtggatgcctcctgggtggc 970 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,498,446 Number of Sequences: 3902068 Number of extensions: 4498446 Number of successful extensions: 85250 Number of sequences better than 10.0: 103 Number of HSP's better than 10.0 without gapping: 103 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 84672 Number of HSP's gapped (non-prelim): 544 length of query: 607 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 584 effective length of database: 17,143,297,704 effective search space: 10011685859136 effective search space used: 10011685859136 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
