| Clone Name | rbags22c15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AC154226.3| Mus musculus BAC clone RP24-353J14 from chromosome 13, complete sequence Length = 196991 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 atcctgtgtcacaatcaccat 169 ||||||||||||||||||||| Sbjct: 29464 atcctgtgtcacaatcaccat 29444
>gb|AC154355.1| Mus musculus BAC clone RP23-220N4 from 13, complete sequence Length = 168447 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 atcctgtgtcacaatcaccat 169 ||||||||||||||||||||| Sbjct: 72829 atcctgtgtcacaatcaccat 72809
>emb|CT010470.9| Mouse DNA sequence from clone RP23-313D12 on chromosome 13, complete sequence Length = 199355 Score = 42.1 bits (21), Expect = 0.76 Identities = 21/21 (100%) Strand = Plus / Minus Query: 149 atcctgtgtcacaatcaccat 169 ||||||||||||||||||||| Sbjct: 131285 atcctgtgtcacaatcaccat 131265
>gb|AC159316.3| Mus musculus BAC clone RP23-93F3 from chromosome 8, complete sequence Length = 240812 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 167 catggctgtaggtaggaacaaaag 190 |||||||||||| ||||||||||| Sbjct: 44065 catggctgtagggaggaacaaaag 44088
>gb|AC016023.8| Drosophila melanogaster clone BACR16F16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 tgttcgttaagcgttctgtgttat 45 |||||| ||||||||||||||||| Sbjct: 95162 tgttcgctaagcgttctgtgttat 95185
>emb|CR937047.1|RN510H6 Rattus norvegicus chromosome 5 BAC CH230-510H6, complete sequence Length = 188516 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 67 cagatatgacagtgttcttt 86 |||||||||||||||||||| Sbjct: 90207 cagatatgacagtgttcttt 90226
>gb|AE003780.4| Drosophila melanogaster chromosome 3R, section 118 of 118 of the complete sequence Length = 256818 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 22 tgttcgttaagcgttctgtgttat 45 |||||| ||||||||||||||||| Sbjct: 27521 tgttcgctaagcgttctgtgttat 27544
>gb|AC149787.2| Gallus gallus BAC clone TAM31-60B9 from chromosome ul, complete sequence Length = 146640 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 212 cagtccacagacacccctcc 231 |||||||||||||||||||| Sbjct: 81221 cagtccacagacacccctcc 81202 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,241,763 Number of Sequences: 3902068 Number of extensions: 1241763 Number of successful extensions: 16997 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 16989 Number of HSP's gapped (non-prelim): 8 length of query: 234 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 212 effective length of database: 17,147,199,772 effective search space: 3635206351664 effective search space used: 3635206351664 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)