ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbags21n10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
2dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
3dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 147 6e-32
4dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mR... 147 6e-32
5dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 6e-32
6dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 6e-32
7gb|AY105847.1| Zea mays PCO081230 mRNA sequence 113 8e-22
8ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group... 86 2e-13
9ref|XM_482186.1| Oryza sativa (japonica cultivar-group), mRNA 86 2e-13
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mR... 86 2e-13
12dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
13dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
14dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clon... 86 2e-13
15gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 46 0.16
16gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, co... 46 0.16
17gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, co... 46 0.16
18ref|XM_464548.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.65
19dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 44 0.65
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.65
21dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.65
22gb|BC108597.1| Xenopus laevis cDNA clone MGC:131108 IMAGE:798285... 42 2.6
23emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081 42 2.6
24emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete ... 42 2.6
25emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364 42 2.6
26gb|AF064862.2| Homo sapiens chromosome 21 clone PAC 31P10 map 21... 42 2.6
27ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical... 42 2.6

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                            
Query: 628      gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
                |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 10790302 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 10790243

                                                                      
Query: 688      caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
                ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 10790242 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 10790189



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                            
Query: 363      gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
                ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 10790685 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 10790626

                           
Query: 423      ttggtcttggt 433
                ||| |||||||
Sbjct: 10790625 ttgctcttggt 10790615



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                            
Query: 253      tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
                ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 10790789 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 10790730

                                      
Query: 313      cgagcagggcgacgagcacggc 334
                | ||||||||||||||| ||||
Sbjct: 10790729 caagcagggcgacgagcgcggc 10790708



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                                
Query: 172      gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
                |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 10790860 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 10790815



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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                         
Query: 628   gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
             |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 14025 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 13966

                                                                   
Query: 688   caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
             ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 13965 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 13912



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                         
Query: 363   gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
             ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 14408 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 14349

                        
Query: 423   ttggtcttggt 433
             ||| |||||||
Sbjct: 14348 ttgctcttggt 14338



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                         
Query: 253   tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
             ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 14512 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 14453

                                   
Query: 313   cgagcagggcgacgagcacggc 334
             | ||||||||||||||| ||||
Sbjct: 14452 caagcagggcgacgagcgcggc 14431



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                             
Query: 172   gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
             |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 14583 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 14538



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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                          
Query: 628    gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
              |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 126920 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 126861

                                                                    
Query: 688    caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
              ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 126860 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 126807



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                          
Query: 363    gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
              ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 127303 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 127244

                         
Query: 423    ttggtcttggt 433
              ||| |||||||
Sbjct: 127243 ttgctcttggt 127233



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                          
Query: 253    tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
              ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 127407 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 127348

                                    
Query: 313    cgagcagggcgacgagcacggc 334
              | ||||||||||||||| ||||
Sbjct: 127347 caagcagggcgacgagcgcggc 127326



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                              
Query: 172    gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
              |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 127478 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 127433



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>dbj|AB117987.1| Oryza sativa (japonica cultivar-group) bip103 mRNA for BRI1-KD
            interacting protein 103, complete cds
          Length = 2366

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                        
Query: 628  gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
            |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 1611 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 1552

                                                                  
Query: 688  caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
            ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 1551 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 1498



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 363  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1885 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1826

                       
Query: 423  ttggtcttggt 433
            ||| |||||||
Sbjct: 1825 ttgctcttggt 1815



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 253  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1989 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1930

                                  
Query: 313  cgagcagggcgacgagcacggc 334
            | ||||||||||||||| ||||
Sbjct: 1929 caagcagggcgacgagcgcggc 1908



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 172  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2060 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2015



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>dbj|AK100527.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023101D09, full
            insert sequence
          Length = 2295

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                        
Query: 628  gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
            |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 1613 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 1554

                                                                  
Query: 688  caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
            ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 1553 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 1500



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                        
Query: 363  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
            ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 1887 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 1828

                       
Query: 423  ttggtcttggt 433
            ||| |||||||
Sbjct: 1827 ttgctcttggt 1817



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 253  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1991 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1932

                                  
Query: 313  cgagcagggcgacgagcacggc 334
            | ||||||||||||||| ||||
Sbjct: 1931 caagcagggcgacgagcgcggc 1910



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 172  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 2062 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 2017



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>dbj|AK059253.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-024-H05, full
           insert sequence
          Length = 1352

 Score =  147 bits (74), Expect = 6e-32
 Identities = 104/114 (91%)
 Strand = Plus / Minus

                                                                       
Query: 628 gtgctcgggctgcagccttcgctgcttgcttctcagcctgcttcttcttcctttccaaag 687
           |||| |||||||| |||||||||||||||||||| ||| ||||||||||||||||||  |
Sbjct: 689 gtgcacgggctgctgccttcgctgcttgcttctcggccagcttcttcttcctttccaggg 630

                                                                 
Query: 688 caagtttattcttctcgatttcctcctgtctcttgatctctttcaactttgcta 741
           ||||| |||||||||| || ||||||||||||||||||||||||||||| ||||
Sbjct: 629 caagtctattcttctccatctcctcctgtctcttgatctctttcaacttagcta 576



 Score =  101 bits (51), Expect = 3e-18
 Identities = 66/71 (92%)
 Strand = Plus / Minus

                                                                       
Query: 363 gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctttggcagcggggcc 422
           ||||| |||| |||||||||||||||||||||| ||||||||||||| ||||||||||||
Sbjct: 963 gcccaggaccagtacgactgggctttcttcctcctcaggatcgccttcggcagcggggcc 904

                      
Query: 423 ttggtcttggt 433
           ||| |||||||
Sbjct: 903 ttgctcttggt 893



 Score = 83.8 bits (42), Expect = 8e-13
 Identities = 72/82 (87%)
 Strand = Plus / Minus

                                                                        
Query: 253  tttccttacatcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccg 312
            ||||||| ||||||||||| | |||||| ||| ||||||||||||||||||| ||| | |
Sbjct: 1067 tttccttccatcagttgctagcgctcgctgggaggtagtactggtagtagcctagcacgg 1008

                                  
Query: 313  cgagcagggcgacgagcacggc 334
            | ||||||||||||||| ||||
Sbjct: 1007 caagcagggcgacgagcgcggc 986



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 44/48 (91%), Gaps = 2/48 (4%)
 Strand = Plus / Minus

                                                            
Query: 172  gcagaccacgcactctgttgctctcacctgcaaaattggtctagtaag 219
            |||||||||||||||||||  ||||||||||||||||| || ||||||
Sbjct: 1138 gcagaccacgcactctgtt--tctcacctgcaaaattgttcaagtaag 1093



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>gb|AY105847.1| Zea mays PCO081230 mRNA sequence
          Length = 1699

 Score =  113 bits (57), Expect = 8e-22
 Identities = 81/89 (91%)
 Strand = Plus / Minus

                                                                       
Query: 648 gctgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatt 707
           |||||||||||||||||||||||||||||||| ||||| ||||| || |||||||| || 
Sbjct: 990 gctgcttgcttctcagcctgcttcttcttcctctccaatgcaagcttgttcttctcaatc 931

                                        
Query: 708 tcctcctgtctcttgatctctttcaactt 736
           |||||||| ||||| ||||||||||||||
Sbjct: 930 tcctcctgcctcttcatctctttcaactt 902



 Score = 63.9 bits (32), Expect = 7e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                        
Query: 263  tcagttgctggtgctcgccgggcggtagtactggtagtagcccagcgccgcgagcagggc 322
            |||||||||||   |||| ||| |||||||||||||||| |||||| ||||||| |||||
Sbjct: 1370 tcagttgctggcattcgctgggaggtagtactggtagtatcccagcaccgcgaggagggc 1311

                        
Query: 323  gacgagcacggc 334
             || ||||||||
Sbjct: 1310 aaccagcacggc 1299



 Score = 61.9 bits (31), Expect = 3e-06
 Identities = 43/47 (91%)
 Strand = Plus / Minus

                                                           
Query: 363  gcccatgaccggtacgactgggctttcttcctcttcaggatcgcctt 409
            |||||||||| ||| ||||| || |||||||||||||||||||||||
Sbjct: 1276 gcccatgaccagtaggactgcgccttcttcctcttcaggatcgcctt 1230



 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 193  tctcacctgcaaaattggtct 213
            |||||||||||||||||||||
Sbjct: 1440 tctcacctgcaaaattggtct 1420



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>ref|XM_507220.1| PREDICTED Oryza sativa (japonica cultivar-group), P0671F11.9 mRNA
          Length = 2293

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 650  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1600 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1541

                                           
Query: 710  ctcctgtctcttgatctctttcaactttgct 740
             ||||||||||| ||||||||||| ||||||
Sbjct: 1540 ttcctgtctcttcatctctttcaattttgct 1510



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>ref|XM_482186.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2281

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 650  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1635 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1576

                                           
Query: 710  ctcctgtctcttgatctctttcaactttgct 740
             ||||||||||| ||||||||||| ||||||
Sbjct: 1575 ttcctgtctcttcatctctttcaattttgct 1545



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                            
Query: 650      tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
                |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 18472732 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 18472673

                                               
Query: 710      ctcctgtctcttgatctctttcaactttgct 740
                 ||||||||||| ||||||||||| ||||||
Sbjct: 18472672 ttcctgtctcttcatctctttcaattttgct 18472642



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>dbj|AB117988.1| Oryza sativa (japonica cultivar-group) bip131 mRNA for BRI1-KD
            interacting protein 131, complete cds
          Length = 2275

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 650  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1606 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1547

                                           
Query: 710  ctcctgtctcttgatctctttcaactttgct 740
             ||||||||||| ||||||||||| ||||||
Sbjct: 1546 ttcctgtctcttcatctctttcaattttgct 1516



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>dbj|AP004634.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0671F11
          Length = 159409

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                         
Query: 650   tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
             |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 54755 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 54696

                                            
Query: 710   ctcctgtctcttgatctctttcaactttgct 740
              ||||||||||| ||||||||||| ||||||
Sbjct: 54695 ttcctgtctcttcatctctttcaattttgct 54665



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>dbj|AK099893.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013113F23, full
            insert sequence
          Length = 2281

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 650  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1635 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1576

                                           
Query: 710  ctcctgtctcttgatctctttcaactttgct 740
             ||||||||||| ||||||||||| ||||||
Sbjct: 1575 ttcctgtctcttcatctctttcaattttgct 1545



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>dbj|AK067513.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013110G07, full
            insert sequence
          Length = 2293

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                        
Query: 650  tgcttgcttctcagcctgcttcttcttcctttccaaagcaagtttattcttctcgatttc 709
            |||||| ||||||||||||||||||||||||||||  || || || ||||| || || ||
Sbjct: 1600 tgcttgtttctcagcctgcttcttcttcctttccagtgccagcttgttcttttctatctc 1541

                                           
Query: 710  ctcctgtctcttgatctctttcaactttgct 740
             ||||||||||| ||||||||||| ||||||
Sbjct: 1540 ttcctgtctcttcatctctttcaattttgct 1510



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>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 413     cagcggggccttggtcttggtga 435
               |||||||||||||||||||||||
Sbjct: 2663170 cagcggggccttggtcttggtga 2663148



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>gb|AC108404.8| Mus musculus chromosome 18, clone RP24-491I16, complete sequence
          Length = 196638

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 670    tcttcttcctttccaaagcaagt 692
              |||||||||||||||||||||||
Sbjct: 112386 tcttcttcctttccaaagcaagt 112408



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>gb|AC101682.8| Mus musculus chromosome 18, clone RP23-183C23, complete sequence
          Length = 227840

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 670   tcttcttcctttccaaagcaagt 692
             |||||||||||||||||||||||
Sbjct: 33865 tcttcttcctttccaaagcaagt 33843



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>ref|XM_464548.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 846

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 320 ggcgacgagcacggccacggcg 341
           ||||||||||||||||||||||
Sbjct: 339 ggcgacgagcacggccacggcg 318



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>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026
          Length = 2324132

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 656     cttctcagcctgcttcttcttc 677
               ||||||||||||||||||||||
Sbjct: 1306517 cttctcagcctgcttcttcttc 1306538



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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 320     ggcgacgagcacggccacggcg 341
               ||||||||||||||||||||||
Sbjct: 5819104 ggcgacgagcacggccacggcg 5819125



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>dbj|AP005008.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0544H11
          Length = 178376

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 320   ggcgacgagcacggccacggcg 341
             ||||||||||||||||||||||
Sbjct: 48906 ggcgacgagcacggccacggcg 48927



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>gb|BC108597.1| Xenopus laevis cDNA clone MGC:131108 IMAGE:7982859, complete cds
          Length = 1735

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 709 cctcctgtctcttgatctctt 729
           |||||||||||||||||||||
Sbjct: 535 cctcctgtctcttgatctctt 515



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>emb|AL163281.2|HS21C081 Homo sapiens chromosome 21 segment HS21C081
          Length = 340000

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 707    ttcctcctgtctcttgatctctttc 731
              ||||||||||||||| |||||||||
Sbjct: 184189 ttcctcctgtctctttatctctttc 184213



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>emb|AL939125.1|SCO939125 Streptomyces coelicolor A3(2) complete genome; segment 22/29
          Length = 295150

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 306   agcgccgcgagcagggcgacg 326
             |||||||||||||||||||||
Sbjct: 14231 agcgccgcgagcagggcgacg 14211



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>emb|AL022243.3|SPCC364 S.pombe chromosome III cosmid c364
          Length = 14999

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 384   gctttcttcctcttcaggatc 404
             |||||||||||||||||||||
Sbjct: 13769 gctttcttcctcttcaggatc 13749



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>gb|AF064862.2| Homo sapiens chromosome 21 clone PAC 31P10 map 21q22.3, complete
             sequence
          Length = 145861

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 707   ttcctcctgtctcttgatctctttc 731
             ||||||||||||||| |||||||||
Sbjct: 30027 ttcctcctgtctctttatctctttc 30051



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>ref|NM_001022836.1| Schizosaccharomyces pombe 972h- hypothetical protein (SPCC364.01),
           partial mRNA
          Length = 963

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 384 gctttcttcctcttcaggatc 404
           |||||||||||||||||||||
Sbjct: 336 gctttcttcctcttcaggatc 356


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,807,242
Number of Sequences: 3902068
Number of extensions: 6807242
Number of successful extensions: 173959
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 173649
Number of HSP's gapped (non-prelim): 304
length of query: 741
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 718
effective length of database: 17,143,297,704
effective search space: 12308887751472
effective search space used: 12308887751472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)
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